
Lsi11G004640 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGGATTTCCCATCTTGTTTTGGCGAAAATGGTGTCCAAGTTGCTGATTTCTCTTCTTCAAACAATGGTAAGACTGCTCAAAACCTTGTCACTTGTGTTTATCAATGTCGATTACGAGGGCGTACTTGTCTGATTAGTGTTACTTGGAGTAAAAATCTGATGGGTCAAGGGCTAAGTGTTGGCATTGATGATTCTTCAAATCAATGTCTCTGTAAGGTTGATATTAAGCCATGGTTGTTCTCTAAAAGAAGAGGCTCTAAAAGTTTAGAAGCTTATTCCTGTAAAATTGACATTTATTGGGACCTTTCTTCTGCAAAATTTGGATCTGGGCCTGAACCTTTGGAGGGTTATTATGTGGGAATTGTAGTGGATAAGCAAATGGTTCTTCTTCTTGGGGATTTGAGAAAAGAAGCTTTCAGAAAGTCCAATTCCTCTCCTGTGCCTTCTTCTGCTGTCTTCATTTCCAAGAAGGAGCATATTTTTGGGAAGAAGGTGTTCTGTTCCAAAGCTCAGTTTTGTGACAATGGTCAGATTCACGACATCGCTATCGAGTGTGATACAATTGGCGTTAGTGAACCGTGCCTGATTCTACGAGTCGATTCGAAGACGGTGTTGCAGGTGAAGAGGCTGCAATGGAAGTTCCGAGGGAATCACACCATCTTGGTTGAAGGGCTTGCAGTGGAAGTGTTTTGGGATGTTCATAATTGGCTGTTTAGTACTTCACCAGGGAATGCTGTTTTTATGTTCAAAACATGTGTGTCTGCTGAAAAGTTGTGGGGAAGTCAACCAGTTTGTGATCCTAATGTCTTGTCCTGGTCTTTCTCTCAGAGATTTTCTGACAGCAAATCACAAGGTCTTGGTTTCTCATTGATGTTATATGCCTGGAAGAATGAATAGAGGAGTTGTTTTGCAGATTCTTTTCTAATTTTTAACAAGAAAAAGAAACTCTTAGCGAGTGAGAGATTTTTATTATCCCTTTCCGCTTCGATTACATTCGGTCCGATAAATGATCGTCAATTGTCTTCTCTTCCTTTTTTCCACCTTCTTGAGTAAACTGAGCCATTTGATTATATGAGAGAGGATTTTGTTATAGTTGGTTGTACATTCTTTCATCCAGTGTTTTTGCTTTGTTTGAACTTTATATCATTGTTGTTAAGTATATATCTAATATATGATCACTTATTTTAGCTTCTTGCTATTGAATTTGATCTTCCCAAGTCATTACTTCTTAGATTTTTTCCATCGATATAACCCGACCCTCTTGATCACTCATAAACTTTGTTTCCTCAGTTGAAATTTTAGAAAAGGAAAACAACCAGCTTCAACATTCAACATTCTGTGCTAACATCGTTTGCTTTGCTGCTTTCAACGATTTCTTGGGTTTTGTTTTCTTTCTTTTGTTGTAGGAGTTTCTGCTGGCGCAGAAAAGCAAGGATTTGCAGTTTGGTTAGTCATGCCAACTGTTATAATTTATGCTTACTTCTTCAGTGTGTTTAGGTTCACAAGTTTTATAGCCATGGATGACCTCCAGAATCCATTATTTTGTTGAAATGTTGTACTTTCTCCAGAACTTCCATCACCACATCAATCATCACATCGGAATACGGTTTTTCGTGGATCCCTCAATGTAACTTTCTAAACTTTAGACTTGATCCTTTTGCCAGTTCTTTGGGTTCTCTGTGATTCAATCGACCCTTTATCATCCACAAGTCTCAGGTAAGGCTTGAATCCTTAAGTTAAATGTCCTTTTGGCTGCTTACATTGTTAACCTTAATCTCAAACCTACGGAAGTTATTTCTAAAAATTGTTTTTTGGTTTTATAATAGTTCATTGAGAACTTGTTCGGTTAATTGTTTTCTAGAAGAGTAGAAGTGTTTTCCTAGTTTTTATAAATGTGTTCTTCTGAATTTCTTGTGAAGTTGTTCTTTCCTCGAAATCACAAGTATGTTAATAGGAATAACATTAACATACATTGCAGGCTTCCATGATGAAGCTTCCGACGGTTTCTGCTTGTGACCGATCTTTTCAGCTGCCAGTTTGCTGTGCATATTTTAAGCTCGTCGACCGAAGTTTCCACATCGTTAAGTACTTGTGCAGTTCGTCCTTCTCGTAAGTATTTTAAGCTTAGTATTACCCTTTGTAAAGACTAAATTGTGCTCTAACCTGTGAAGTTCAAACTTTTCAAGTTTATTGGTGATAATTTAATATGGTATCAGAACAACCTCCAAGATATGGTGATTCTAATCAACATCTTAGTCCGCACATGAAGGAGAGGCTAAAAGATATGTTTATAAGATCTTTCTATAGTGGTAAATTTACACATTCTGTTGGTTTTTTTCTGCATTTTGGTGTTAAAGGAGCTGTTTGGTTGCTACACCAACACATTTTCACCCACTTTAAGATAAACAGCTCTAAACTTTATTTCAAAACAACCATTAAACTTGTTCATGGATTTGAAACCTGCAAGCTCGGCTTCTCGTTTGATTCGTATGGGGTTGGATTTAGATATGCATCTCGAAGATGAAGTTCAAGGGTACATTGTATCTATGAGTAGTAATGGCATATCCGATATCTTTGATTGAACGACTTGAAAACCCTGAAGCATTCCATAGTTTACAATGTTATTTCTATGCGTTTTCAGGTTTCTGTGATCTATATTTGAAATGTCTCCCGATGTTGTAGGGTCAGGTAAGTTGTATCGTGAGATTTGTTCTGACGTGCGTAAGCTGACCGGAACACTCACGTATATATATTTGAAATGCCCAATTCTGCTGTGAATTATTGTTCTTATCATGTTTATGTTTGCTTTTTTGGTTCTGGGAATATGCATTCAGGATTTAGGAAAAGCAGTGGTGTAATTGTCTGATAGCAACAACTTACTGAGACTTGTTATAGGATGAAGCAAAATATTTTTAGAAGAGACAATGGAGGCTAAAGTTTGAACAAAAGACATCATATAAAATCGGTTAAATTATAAGTTTAGTCTTTGAATGTTAATGGTTGTGTCTGAATTTTGAAGTTTGTGTCTATTTAGTCTTTAAACTTTCAAATGTGTCTAATAAGTTACTAGACTTTCAATTTTGTATTTAACAAGTCTCTTACAAATT ATGAGGGATTTCCCATCTTGTTTTGGCGAAAATGGTGTCCAAGTTGCTGATTTCTCTTCTTCAAACAATGGTAAGACTGCTCAAAACCTTGTCACTTGTGTTTATCAATGTCGATTACGAGGGCGTACTTGTCTGATTAGTGTTACTTGGAGTAAAAATCTGATGGGTCAAGGGCTAAGTGTTGGCATTGATGATTCTTCAAATCAATGTCTCTGTAAGGTTGATATTAAGCCATGGTTGTTCTCTAAAAGAAGAGGCTCTAAAAGTTTAGAAGCTTATTCCTGTAAAATTGACATTTATTGGGACCTTTCTTCTGCAAAATTTGGATCTGGGCCTGAACCTTTGGAGGGTTATTATGTGGGAATTGTAGTGGATAAGCAAATGGTTCTTCTTCTTGGGGATTTGAGAAAAGAAGCTTTCAGAAAGTCCAATTCCTCTCCTGTGCCTTCTTCTGCTGTCTTCATTTCCAAGAAGGAGCATATTTTTGGGAAGAAGGTGTTCTGTTCCAAAGCTCAGTTTTGTGACAATGGTCAGATTCACGACATCGCTATCGAGTGTGATACAATTGGCGTTAGTGAACCGTGCCTGATTCTACGAGTCGATTCGAAGACGGTGTTGCAGGTGAAGAGGCTGCAATGGAAGTTCCGAGGGAATCACACCATCTTGGTTGAAGGGCTTGCAGTGGAAGTGTTTTGGGATGTTCATAATTGGCTGTTTAGTACTTCACCAGGGAATGCTGTTTTTATGTTCAAAACATGTGTGTCTGCTGAAAAGTTGTGGGGAAGTCAACCAGTTTGTGATCCTAATGTCTTGTCCTGGTCTTTCTCTCAGAGATTTTCTGACAGCAAATCACAAGGAGTTTCTGCTGGCGCAGAAAAGCAAGGATTTGCAGTTTGGTTAGTCATGCCAACTGTTATAATTTATGCTTACTTCTTCAAACTTCCATCACCACATCAATCATCACATCGGAATACGGTTTTTCGTGGATCCCTCAATGCTTCCATGATGAAGCTTCCGACGGTTTCTGCTTGTGACCGATCTTTTCAGCTGCCAGTTTGCTGTGCATATTTTAAGCTCGTCGACCGAAGTTTCCACATCGTTAAGTACTTGTGCAGTTCGTCCTTCTCGTAAGTATTTTAAGCTTAGTATTACCCTTTGTAAAGACTAAATTGTGCTCTAACCTGTGAAGTTCAAACTTTTCAAGTTTATTGGTGATAATTTAATATGGTATCAGAACAACCTCCAAGATATGGTGATTCTAATCAACATCTTAGTCCGCACATGAAGGAGAGGCTAAAAGATATGTTTATAAGATCTTTCTATAGTGGTAAATTTACACATTCTGTTGGTTTTTTTCTGCATTTTGGTGTTAAAGGAGCTGTTTGGTTGCTACACCAACACATTTTCACCCACTTTAAGATAAACAGCTCTAAACTTTATTTCAAAACAACCATTAAACTTGTTCATGGATTTGAAACCTGCAAGCTCGGCTTCTCGTTTGATTCGTATGGGGTTGGATTTAGATATGCATCTCGAAGATGAAGTTCAAGGGTACATTGTATCTATGAGTAGTAATGGCATATCCGATATCTTTGATTGAACGACTTGAAAACCCTGAAGCATTCCATAGTTTACAATGTTATTTCTATGCGTTTTCAGGTTTCTGTGATCTATATTTGAAATGTCTCCCGATGTTGTAGGGTCAGGTAAGTTGTATCGTGAGATTTGTTCTGACGTGCGTAAGCTGACCGGAACACTCACGTATATATATTTGAAATGCCCAATTCTGCTGTGAATTATTGTTCTTATCATGTTTATGTTTGCTTTTTTGGTTCTGGGAATATGCATTCAGGATTTAGGAAAAGCAGTGGTGTAATTGTCTGATAGCAACAACTTACTGAGACTTGTTATAGGATGAAGCAAAATATTTTTAGAAGAGACAATGGAGGCTAAAGTTTGAACAAAAGACATCATATAAAATCGGTTAAATTATAAGTTTAGTCTTTGAATGTTAATGGTTGTGTCTGAATTTTGAAGTTTGTGTCTATTTAGTCTTTAAACTTTCAAATGTGTCTAATAAGTTACTAGACTTTCAATTTTGTATTTAACAAGTCTCTTACAAATT ATGAGGGATTTCCCATCTTGTTTTGGCGAAAATGGTGTCCAAGTTGCTGATTTCTCTTCTTCAAACAATGGTAAGACTGCTCAAAACCTTGTCACTTGTGTTTATCAATGTCGATTACGAGGGCGTACTTGTCTGATTAGTGTTACTTGGAGTAAAAATCTGATGGGTCAAGGGCTAAGTGTTGGCATTGATGATTCTTCAAATCAATGTCTCTGTAAGGTTGATATTAAGCCATGGTTGTTCTCTAAAAGAAGAGGCTCTAAAAGTTTAGAAGCTTATTCCTGTAAAATTGACATTTATTGGGACCTTTCTTCTGCAAAATTTGGATCTGGGCCTGAACCTTTGGAGGGTTATTATGTGGGAATTGTAGTGGATAAGCAAATGGTTCTTCTTCTTGGGGATTTGAGAAAAGAAGCTTTCAGAAAGTCCAATTCCTCTCCTGTGCCTTCTTCTGCTGTCTTCATTTCCAAGAAGGAGCATATTTTTGGGAAGAAGGTGTTCTGTTCCAAAGCTCAGTTTTGTGACAATGGTCAGATTCACGACATCGCTATCGAGTGTGATACAATTGGCGTTAGTGAACCGTGCCTGATTCTACGAGTCGATTCGAAGACGGTGTTGCAGGTGAAGAGGCTGCAATGGAAGTTCCGAGGGAATCACACCATCTTGGTTGAAGGGCTTGCAGTGGAAGTGTTTTGGGATGTTCATAATTGGCTGTTTAGTACTTCACCAGGGAATGCTGTTTTTATGTTCAAAACATGTGTGTCTGCTGAAAAGTTGTGGGGAAGTCAACCAGTTTGTGATCCTAATGTCTTGTCCTGGTCTTTCTCTCAGAGATTTTCTGACAGCAAATCACAAGGAGTTTCTGCTGGCGCAGAAAAGCAAGGATTTGCAGTTTGGTTAGTCATGCCAACTGTTATAATTTATGCTTACTTCTTCAAACTTCCATCACCACATCAATCATCACATCGGAATACGGTTTTTCGTGGATCCCTCAATGCTTCCATGATGAAGCTTCCGACGGTTTCTGCTTGTGACCGATCTTTTCAGCTGCCAGTTTGCTGTGCATATTTTAAGCTCGTCGACCGAAGTTTCCACATCGTTAAGTACTTGTGCAGTTCGTCCTTCTCGTAA MRDFPSCFGENGVQVADFSSSNNGKTAQNLVTCVYQCRLRGRTCLISVTWSKNLMGQGLSVGIDDSSNQCLCKVDIKPWLFSKRRGSKSLEAYSCKIDIYWDLSSAKFGSGPEPLEGYYVGIVVDKQMVLLLGDLRKEAFRKSNSSPVPSSAVFISKKEHIFGKKVFCSKAQFCDNGQIHDIAIECDTIGVSEPCLILRVDSKTVLQVKRLQWKFRGNHTILVEGLAVEVFWDVHNWLFSTSPGNAVFMFKTCVSAEKLWGSQPVCDPNVLSWSFSQRFSDSKSQGVSAGAEKQGFAVWLVMPTVIIYAYFFKLPSPHQSSHRNTVFRGSLNASMMKLPTVSACDRSFQLPVCCAYFKLVDRSFHIVKYLCSSSFS Homology
BLAST of Lsi11G004640 vs. ExPASy TrEMBL
Match: A0A5D3D4D4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001280 PE=4 SV=1) HSP 1 Score: 589.0 bits (1517), Expect = 1.4e-164 Identity = 278/287 (96.86%), Postives = 285/287 (99.30%), Query Frame = 0
BLAST of Lsi11G004640 vs. ExPASy TrEMBL
Match: A0A1S3C1B8 (uncharacterized protein LOC103495897 OS=Cucumis melo OX=3656 GN=LOC103495897 PE=4 SV=1) HSP 1 Score: 589.0 bits (1517), Expect = 1.4e-164 Identity = 278/287 (96.86%), Postives = 285/287 (99.30%), Query Frame = 0
BLAST of Lsi11G004640 vs. ExPASy TrEMBL
Match: A0A0A0LLE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G011590 PE=4 SV=1) HSP 1 Score: 587.8 bits (1514), Expect = 3.2e-164 Identity = 277/287 (96.52%), Postives = 285/287 (99.30%), Query Frame = 0
BLAST of Lsi11G004640 vs. ExPASy TrEMBL
Match: A0A6J1CNB0 (uncharacterized protein LOC111013167 OS=Momordica charantia OX=3673 GN=LOC111013167 PE=4 SV=1) HSP 1 Score: 583.2 bits (1502), Expect = 7.9e-163 Identity = 271/287 (94.43%), Postives = 285/287 (99.30%), Query Frame = 0
BLAST of Lsi11G004640 vs. ExPASy TrEMBL
Match: A0A6J1G594 (uncharacterized protein LOC111450853 OS=Cucurbita moschata OX=3662 GN=LOC111450853 PE=4 SV=1) HSP 1 Score: 572.0 bits (1473), Expect = 1.8e-159 Identity = 272/285 (95.44%), Postives = 279/285 (97.89%), Query Frame = 0
BLAST of Lsi11G004640 vs. NCBI nr
Match: XP_008455804.1 (PREDICTED: uncharacterized protein LOC103495897 [Cucumis melo] >KAA0063623.1 hypothetical protein E6C27_scaffold329G001350 [Cucumis melo var. makuwa] >TYK18403.1 hypothetical protein E5676_scaffold456G001280 [Cucumis melo var. makuwa]) HSP 1 Score: 589.0 bits (1517), Expect = 3.0e-164 Identity = 278/287 (96.86%), Postives = 285/287 (99.30%), Query Frame = 0
BLAST of Lsi11G004640 vs. NCBI nr
Match: XP_004139223.1 (uncharacterized protein LOC101220430 [Cucumis sativus] >KGN60840.2 hypothetical protein Csa_019216 [Cucumis sativus]) HSP 1 Score: 587.8 bits (1514), Expect = 6.6e-164 Identity = 277/287 (96.52%), Postives = 285/287 (99.30%), Query Frame = 0
BLAST of Lsi11G004640 vs. NCBI nr
Match: XP_022143255.1 (uncharacterized protein LOC111013167 [Momordica charantia]) HSP 1 Score: 583.2 bits (1502), Expect = 1.6e-162 Identity = 271/287 (94.43%), Postives = 285/287 (99.30%), Query Frame = 0
BLAST of Lsi11G004640 vs. NCBI nr
Match: XP_038891019.1 (uncharacterized protein LOC120080436 [Benincasa hispida] >XP_038891020.1 uncharacterized protein LOC120080436 [Benincasa hispida]) HSP 1 Score: 580.9 bits (1496), Expect = 8.1e-162 Identity = 274/287 (95.47%), Postives = 282/287 (98.26%), Query Frame = 0
BLAST of Lsi11G004640 vs. NCBI nr
Match: XP_022946914.1 (uncharacterized protein LOC111450853 [Cucurbita moschata] >XP_023545462.1 uncharacterized protein LOC111804886 [Cucurbita pepo subsp. pepo] >KAG6599295.1 hypothetical protein SDJN03_09073, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030294.1 hypothetical protein SDJN02_08641, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 572.0 bits (1473), Expect = 3.8e-159 Identity = 272/285 (95.44%), Postives = 279/285 (97.89%), Query Frame = 0
BLAST of Lsi11G004640 vs. TAIR 10
Match: AT5G28150.1 (Plant protein of unknown function (DUF868) ) HSP 1 Score: 409.8 bits (1052), Expect = 2.3e-114 Identity = 194/278 (69.78%), Postives = 234/278 (84.17%), Query Frame = 0
BLAST of Lsi11G004640 vs. TAIR 10
Match: AT3G04860.1 (Plant protein of unknown function (DUF868) ) HSP 1 Score: 397.1 bits (1019), Expect = 1.5e-110 Identity = 186/289 (64.36%), Postives = 237/289 (82.01%), Query Frame = 0
BLAST of Lsi11G004640 vs. TAIR 10
Match: AT4G12690.1 (Plant protein of unknown function (DUF868) ) HSP 1 Score: 224.9 bits (572), Expect = 1.1e-58 Identity = 108/231 (46.75%), Postives = 153/231 (66.23%), Query Frame = 0
BLAST of Lsi11G004640 vs. TAIR 10
Match: AT4G12690.2 (Plant protein of unknown function (DUF868) ) HSP 1 Score: 224.9 bits (572), Expect = 1.1e-58 Identity = 108/231 (46.75%), Postives = 153/231 (66.23%), Query Frame = 0
BLAST of Lsi11G004640 vs. TAIR 10
Match: AT2G04220.1 (Plant protein of unknown function (DUF868) ) HSP 1 Score: 223.8 bits (569), Expect = 2.3e-58 Identity = 104/231 (45.02%), Postives = 151/231 (65.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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