Lsi11G003930 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G003930
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	PLATZ transcription factor family protein
Location	chr11: 4086168 .. 4087477 (+)
RNA-Seq Expression	Lsi11G003930
Synteny	Lsi11G003930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCAAAATTTCTCATTAAAAACCCAAATATTCTTCATTTCTAAGCCTCCTTCAAAGCTTTCAAGTGTTTTATGTCATCATGGTATTTTTTTTTTTAATTTCTTCTAATATTTTGGGTTTTTGGTGGTTCAATTGATGATAGTGTTTTGTATTATTATTATTATTATTTTTAGGGAATTCAAAAGCCTGCATGGTTAGAAGCACTTTACAACCAAAAGTTCTTTGTGGGATGTTCATTTCATGAGACTTCAAAGAAGAATGAGAAGAACATTTGTTGTTTGGATTGTTGCATTAGTATTTGCCCTCATTGTTTGTCGTCTCATCGATTCCATCGCCTTCTTCAAGTTCGTCGATATGTTTATCATGACGTCGTTCGACTCGAAGATCTTCAAAAACTTATAGATTGCTCCAATGTTCAGGTTAGTATATAATTGAAAATTAATGTTTAATAATTCTCTCCCTCTTTTCTCTCTAATGCAATTGAGCTTAATTAATTTAGCTAATTTGAAGGGTTTTTTTTTTTTTTTTTTTTTTTTTGTAAATTTCTTAGCCTTATACCATAAATAGTGCCAAAGTGGTGTTCATCAAGAAGAGACCTCAAAATAGACAATTTAAAGGATCTGGAAATTATTGCACTTCTTGTGATAGAAGTCTTCAAGAACCTTATGTTCATTGCTCTCTTGGATGCAAGGTATACAATTTTATTTATTTTTCGTATTAAATTACAATTTAGTCCTTTTAATTTGAAGAAAGTTAAATTTTAAATTTCAATATATATGGTTTTAAAATTTAAAGTTTCATATATATGATTTGATGAATCATCATATGAGTTTTATCAAATTGTAAGATTGAATTCTAATTATAAGGACTCAATTATAATGTTCTCACCATTTAAGAACCAAAATTTTGTAATTTTAACATATTTTAATGGGTTGTTGATGAAATTAAGTTATAATTTTTCATTAATTCAGGTGGATTTTGTATTGAAGCACAAGAGAGACTTAACTTCTTACCTTAGACCATGCAATTCTCTCCCACTTAGTATGGATTTTTTAGTTCCACAAGATGTAGGAGATGATGATATGACAAACGAGACTCCTCGTTCGACGGTTGTGGACTATGATGAACCAATGAGCTCGTCTTCAGGATCCGAGAACATGAGCATAGCTCAACCACCAATTGTCCGAAAGAAGAGAAGTGGTCTTTGTTTGTGCGGAAGATCAACTAGAAAGATATCTAGTGAAGATATAGCAATAAGTATGAGCATAAGTAGAAGGAAAGGCATCCCTCATAGATCTCCCTTGTGTTAA

mRNA sequence

CTCCAAAATTTCTCATTAAAAACCCAAATATTCTTCATTTCTAAGCCTCCTTCAAAGCTTTCAAGTGTTTTATGTCATCATGGGAATTCAAAAGCCTGCATGGTTAGAAGCACTTTACAACCAAAAGTTCTTTGTGGGATGTTCATTTCATGAGACTTCAAAGAAGAATGAGAAGAACATTTGTTGTTTGGATTGTTGCATTAGTATTTGCCCTCATTGTTTGTCGTCTCATCGATTCCATCGCCTTCTTCAAGTTCGTCGATATGTTTATCATGACGTCGTTCGACTCGAAGATCTTCAAAAACTTATAGATTGCTCCAATGTTCAGCCTTATACCATAAATAGTGCCAAAGTGGTGTTCATCAAGAAGAGACCTCAAAATAGACAATTTAAAGGATCTGGAAATTATTGCACTTCTTGTGATAGAAGTCTTCAAGAACCTTATGTTCATTGCTCTCTTGGATGCAAGGTGGATTTTGTATTGAAGCACAAGAGAGACTTAACTTCTTACCTTAGACCATGCAATTCTCTCCCACTTAGTATGGATTTTTTAGTTCCACAAGATGTAGGAGATGATGATATGACAAACGAGACTCCTCGTTCGACGGTTGTGGACTATGATGAACCAATGAGCTCGTCTTCAGGATCCGAGAACATGAGCATAGCTCAACCACCAATTGTCCGAAAGAAGAGAAGTGGTCTTTGTTTGTGCGGAAGATCAACTAGAAAGATATCTAGTGAAGATATAGCAATAAGTATGAGCATAAGTAGAAGGAAAGGCATCCCTCATAGATCTCCCTTGTGTTAA

Coding sequence (CDS)

ATGGGAATTCAAAAGCCTGCATGGTTAGAAGCACTTTACAACCAAAAGTTCTTTGTGGGATGTTCATTTCATGAGACTTCAAAGAAGAATGAGAAGAACATTTGTTGTTTGGATTGTTGCATTAGTATTTGCCCTCATTGTTTGTCGTCTCATCGATTCCATCGCCTTCTTCAAGTTCGTCGATATGTTTATCATGACGTCGTTCGACTCGAAGATCTTCAAAAACTTATAGATTGCTCCAATGTTCAGCCTTATACCATAAATAGTGCCAAAGTGGTGTTCATCAAGAAGAGACCTCAAAATAGACAATTTAAAGGATCTGGAAATTATTGCACTTCTTGTGATAGAAGTCTTCAAGAACCTTATGTTCATTGCTCTCTTGGATGCAAGGTGGATTTTGTATTGAAGCACAAGAGAGACTTAACTTCTTACCTTAGACCATGCAATTCTCTCCCACTTAGTATGGATTTTTTAGTTCCACAAGATGTAGGAGATGATGATATGACAAACGAGACTCCTCGTTCGACGGTTGTGGACTATGATGAACCAATGAGCTCGTCTTCAGGATCCGAGAACATGAGCATAGCTCAACCACCAATTGTCCGAAAGAAGAGAAGTGGTCTTTGTTTGTGCGGAAGATCAACTAGAAAGATATCTAGTGAAGATATAGCAATAAGTATGAGCATAAGTAGAAGGAAAGGCATCCCTCATAGATCTCCCTTGTGTTAA

Protein sequence

MGIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPYVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDDMTNETPRSTVVDYDEPMSSSSGSENMSIAQPPIVRKKRSGLCLCGRSTRKISSEDIAISMSISRRKGIPHRSPLC

Homology

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BLAST of Lsi11G003930 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 4.5e-100
Identity = 175/256 (68.36%), Postives = 206/256 (80.47%), Query Frame = 0


Query: 1   MGIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVR 60
           MGIQKPAWL+ALY +KFFVGC +HET+KKNE+N+CCLDCC S+CPHC+ SHRFHRLLQVR
Sbjct: 1   MGIQKPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVR 60

Query: 61  RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQE 120
           RYVYHDVVRLEDLQKLIDCSNVQ YTINSAKVVFIKKRPQNRQFKG+GNYCTSCDRSLQE
Sbjct: 61  RYVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQE 120

Query: 121 PYVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDD--MTNETPRSTVV 180
           PY+HCSLGCKVDFV+K  RD+T +L+PC++L L  D+++PQD+  DD     ETPRSTVV
Sbjct: 121 PYIHCSLGCKVDFVMKRYRDITPFLKPCHTLTLGPDYIIPQDLLTDDEVAAYETPRSTVV 180

Query: 181 DYDEPMSSSSGSENMSIA---------QPPIVRKKRSGLCLCGRST---RKISSEDIAIS 240
           D DE MS SS S + + A            +VRKKR+G CLC +S    +++S +   IS
Sbjct: 181 DGDESMSWSSASSDNNNAGAAAAYAATTTHVVRKKRTGFCLCAKSANSYKEVSEDPDDIS 240

Query: 241 MSISRRKGIPHRSPLC 243
             I+RRKG+P RSPLC
Sbjct: 241 ACINRRKGVPQRSPLC 256

[Close]

BLAST of Lsi11G003930 vs. ExPASy TrEMBL
Match: A0A1S3C4B1 (uncharacterized protein LOC103496511 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496511 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.2e-137
Identity = 235/242 (97.11%), Postives = 241/242 (99.59%), Query Frame = 0


Query: 1   MGIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVR 60
           MGIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVR
Sbjct: 1   MGIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVR 60

Query: 61  RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQE 120
           RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGN+CTSCDRSLQE
Sbjct: 61  RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQE 120

Query: 121 PYVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDDMTNETPRSTVVDY 180
           PYVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFL+PQDVGDD+MTNETPRST+VDY
Sbjct: 121 PYVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLIPQDVGDDEMTNETPRSTIVDY 180

Query: 181 DEPMSSSSGSENMSIAQPPIVRKKRSGLCLCGRSTRKISSEDIAISMSISRRKGIPHRSP 240
           DEPMSSSSGSENMSIAQPPIVRKKRSGLCLCGRS+RKISSEDIA S+SISRRKGIPHRSP
Sbjct: 181 DEPMSSSSGSENMSIAQPPIVRKKRSGLCLCGRSSRKISSEDIATSISISRRKGIPHRSP 240

Query: 241 LC 243
           LC
Sbjct: 241 LC 242

[Close]

BLAST of Lsi11G003930 vs. ExPASy TrEMBL
Match: A0A0A0LI85 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009420 PE=4 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.4e-136
Identity = 237/243 (97.53%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MGIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVR 60
           MGIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVR
Sbjct: 1   MGIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVR 60

Query: 61  RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQE 120
           RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGN+CTSCDRSLQE
Sbjct: 61  RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQE 120

Query: 121 PYVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDDMTNETPRSTVVDY 180
           PYVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDD+MTNETPRST+VDY
Sbjct: 121 PYVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDEMTNETPRSTIVDY 180

Query: 181 DEPMSSSSGSENMSIAQPPIVRKKRSGLCLCGRSTRK-ISSEDIAISMSISRRKGIPHRS 240
           DEPMSSSSGSENMSIAQPPIVRKKRSGLCLCGRS+RK ISSEDIA SMSISRRKGIPHRS
Sbjct: 181 DEPMSSSSGSENMSIAQPPIVRKKRSGLCLCGRSSRKIISSEDIATSMSISRRKGIPHRS 240

Query: 241 PLC 243
           PLC
Sbjct: 241 PLC 243

[Close]

BLAST of Lsi11G003930 vs. ExPASy TrEMBL
Match: A0A1S3C3R2 (uncharacterized protein LOC103496511 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496511 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 5.9e-135
Identity = 231/238 (97.06%), Postives = 237/238 (99.58%), Query Frame = 0


Query: 5   KPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRRYVY 64
           KPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRRYVY
Sbjct: 2   KPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRRYVY 61

Query: 65  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPYVH 124
           HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGN+CTSCDRSLQEPYVH
Sbjct: 62  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQEPYVH 121

Query: 125 CSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDDMTNETPRSTVVDYDEPM 184
           CSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFL+PQDVGDD+MTNETPRST+VDYDEPM
Sbjct: 122 CSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLIPQDVGDDEMTNETPRSTIVDYDEPM 181

Query: 185 SSSSGSENMSIAQPPIVRKKRSGLCLCGRSTRKISSEDIAISMSISRRKGIPHRSPLC 243
           SSSSGSENMSIAQPPIVRKKRSGLCLCGRS+RKISSEDIA S+SISRRKGIPHRSPLC
Sbjct: 182 SSSSGSENMSIAQPPIVRKKRSGLCLCGRSSRKISSEDIATSISISRRKGIPHRSPLC 239

[Close]

BLAST of Lsi11G003930 vs. ExPASy TrEMBL
Match: A0A6J1CNK9 (uncharacterized protein LOC111013118 OS=Momordica charantia OX=3673 GN=LOC111013118 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 2.8e-129
Identity = 223/243 (91.77%), Postives = 237/243 (97.53%), Query Frame = 0


Query: 1   MGIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVR 60
           MGIQKPAWLEALY+QKFFVGCS+HET+KKNEKNICCLDCCISICPHCLSSHRFHRLLQVR
Sbjct: 1   MGIQKPAWLEALYSQKFFVGCSYHETAKKNEKNICCLDCCISICPHCLSSHRFHRLLQVR 60

Query: 61  RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQE 120
           RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQE
Sbjct: 61  RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQE 120

Query: 121 PYVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDDMTNETPRSTVVDY 180
           PYVHCSLGCKV+++++HKRDL SYL+PC+SLPLSMDFLVPQD+GDD+MTNETPRSTVVDY
Sbjct: 121 PYVHCSLGCKVEYLVQHKRDLASYLKPCHSLPLSMDFLVPQDMGDDEMTNETPRSTVVDY 180

Query: 181 DEPMSSSSGSENMSIAQPPIVRKKRSGLCLCGRSTRKI-SSEDIAISMSISRRKGIPHRS 240
           DEPMSSSSGSENMSIAQ  IVRKKRSGLCLCGRS RKI SSED+A S+SISRRKGIPHRS
Sbjct: 181 DEPMSSSSGSENMSIAQTSIVRKKRSGLCLCGRSVRKILSSEDMATSISISRRKGIPHRS 240

Query: 241 PLC 243
           PLC
Sbjct: 241 PLC 243

[Close]

BLAST of Lsi11G003930 vs. ExPASy TrEMBL
Match: A0A6J1FHQ2 (uncharacterized protein LOC111444245 OS=Cucurbita moschata OX=3662 GN=LOC111444245 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 3.9e-123
Identity = 214/243 (88.07%), Postives = 230/243 (94.65%), Query Frame = 0


Query: 1   MGIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVR 60
           MGIQKPAWLEALY QKFFVGCSFHET+KKNEKNICCLDCCISICPHC+SSHRFHRLLQVR
Sbjct: 4   MGIQKPAWLEALYTQKFFVGCSFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVR 63

Query: 61  RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQE 120
           RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSC RSLQE
Sbjct: 64  RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQE 123

Query: 121 PYVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDDMTNETPRSTVVDY 180
           PY+HCSLGCKVDFVLKHKR+L+SYL+PCNSLPLSMDFLV QD+GDD+MTNETP ST+VDY
Sbjct: 124 PYIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QDMGDDEMTNETPHSTIVDY 183

Query: 181 DEPM-SSSSGSENMSIAQPPIVRKKRSGLCLCGRSTRKISSEDIAISMSISRRKGIPHRS 240
           DEPM SSSSGSE MSI   PI+RKKR+G+ LCGRST KIS+ED+  S+SI+RRKGIPHRS
Sbjct: 184 DEPMSSSSSGSETMSIPHTPIIRKKRTGVYLCGRSTSKISNEDMTTSISINRRKGIPHRS 243

Query: 241 PLC 243
           PLC
Sbjct: 244 PLC 245

[Close]

BLAST of Lsi11G003930 vs. NCBI nr
Match: XP_008456605.1 (PREDICTED: uncharacterized protein LOC103496511 isoform X1 [Cucumis melo])

HSP 1 Score: 498.0 bits (1281), Expect = 4.4e-137
Identity = 235/242 (97.11%), Postives = 241/242 (99.59%), Query Frame = 0


Query: 1   MGIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVR 60
           MGIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVR
Sbjct: 1   MGIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVR 60

Query: 61  RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQE 120
           RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGN+CTSCDRSLQE
Sbjct: 61  RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQE 120

Query: 121 PYVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDDMTNETPRSTVVDY 180
           PYVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFL+PQDVGDD+MTNETPRST+VDY
Sbjct: 121 PYVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLIPQDVGDDEMTNETPRSTIVDY 180

Query: 181 DEPMSSSSGSENMSIAQPPIVRKKRSGLCLCGRSTRKISSEDIAISMSISRRKGIPHRSP 240
           DEPMSSSSGSENMSIAQPPIVRKKRSGLCLCGRS+RKISSEDIA S+SISRRKGIPHRSP
Sbjct: 181 DEPMSSSSGSENMSIAQPPIVRKKRSGLCLCGRSSRKISSEDIATSISISRRKGIPHRSP 240

Query: 241 LC 243
           LC
Sbjct: 241 LC 242

[Close]

BLAST of Lsi11G003930 vs. NCBI nr
Match: XP_038889372.1 (uncharacterized protein LOC120079291 [Benincasa hispida])

HSP 1 Score: 495.7 bits (1275), Expect = 2.2e-136
Identity = 236/241 (97.93%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 2   GIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRR 61
           GIQKPAWLEALYNQKFFVGCSFHET+KKNEKNICCLDCCISICPHCLSSHRFHRLLQVRR
Sbjct: 29  GIQKPAWLEALYNQKFFVGCSFHETAKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRR 88

Query: 62  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEP 121
           YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEP
Sbjct: 89  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEP 148

Query: 122 YVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDDMTNETPRSTVVDYD 181
           YVHCSLGCKVDFVLKHKRDLTSYLR CNSLPLSMDFLVPQ+VGDD+MTNETPRSTVVDYD
Sbjct: 149 YVHCSLGCKVDFVLKHKRDLTSYLRSCNSLPLSMDFLVPQEVGDDEMTNETPRSTVVDYD 208

Query: 182 EPMSSSSGSENMSIAQPPIVRKKRSGLCLCGRSTRKISSEDIAISMSISRRKGIPHRSPL 241
           EPMSSSSGSENMSIAQPPIVRKKRSGLCLCGRSTRKISSEDIA SMSISRRKGIPHRSPL
Sbjct: 209 EPMSSSSGSENMSIAQPPIVRKKRSGLCLCGRSTRKISSEDIATSMSISRRKGIPHRSPL 268

Query: 242 C 243
           C
Sbjct: 269 C 269

[Close]

BLAST of Lsi11G003930 vs. NCBI nr
Match: XP_011648727.1 (uncharacterized protein LOC101202757 [Cucumis sativus] >KGN60754.1 hypothetical protein Csa_019212 [Cucumis sativus])

HSP 1 Score: 495.4 bits (1274), Expect = 2.9e-136
Identity = 237/243 (97.53%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MGIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVR 60
           MGIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVR
Sbjct: 1   MGIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVR 60

Query: 61  RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQE 120
           RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGN+CTSCDRSLQE
Sbjct: 61  RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQE 120

Query: 121 PYVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDDMTNETPRSTVVDY 180
           PYVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDD+MTNETPRST+VDY
Sbjct: 121 PYVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDEMTNETPRSTIVDY 180

Query: 181 DEPMSSSSGSENMSIAQPPIVRKKRSGLCLCGRSTRK-ISSEDIAISMSISRRKGIPHRS 240
           DEPMSSSSGSENMSIAQPPIVRKKRSGLCLCGRS+RK ISSEDIA SMSISRRKGIPHRS
Sbjct: 181 DEPMSSSSGSENMSIAQPPIVRKKRSGLCLCGRSSRKIISSEDIATSMSISRRKGIPHRS 240

Query: 241 PLC 243
           PLC
Sbjct: 241 PLC 243

[Close]

BLAST of Lsi11G003930 vs. NCBI nr
Match: XP_008456613.1 (PREDICTED: uncharacterized protein LOC103496511 isoform X2 [Cucumis melo])

HSP 1 Score: 490.0 bits (1260), Expect = 1.2e-134
Identity = 231/238 (97.06%), Postives = 237/238 (99.58%), Query Frame = 0


Query: 5   KPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRRYVY 64
           KPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRRYVY
Sbjct: 2   KPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRRYVY 61

Query: 65  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPYVH 124
           HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGN+CTSCDRSLQEPYVH
Sbjct: 62  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQEPYVH 121

Query: 125 CSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDDMTNETPRSTVVDYDEPM 184
           CSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFL+PQDVGDD+MTNETPRST+VDYDEPM
Sbjct: 122 CSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLIPQDVGDDEMTNETPRSTIVDYDEPM 181

Query: 185 SSSSGSENMSIAQPPIVRKKRSGLCLCGRSTRKISSEDIAISMSISRRKGIPHRSPLC 243
           SSSSGSENMSIAQPPIVRKKRSGLCLCGRS+RKISSEDIA S+SISRRKGIPHRSPLC
Sbjct: 182 SSSSGSENMSIAQPPIVRKKRSGLCLCGRSSRKISSEDIATSISISRRKGIPHRSPLC 239

[Close]

BLAST of Lsi11G003930 vs. NCBI nr
Match: XP_022143189.1 (uncharacterized protein LOC111013118 [Momordica charantia])

HSP 1 Score: 471.1 bits (1211), Expect = 5.8e-129
Identity = 223/243 (91.77%), Postives = 237/243 (97.53%), Query Frame = 0


Query: 1   MGIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVR 60
           MGIQKPAWLEALY+QKFFVGCS+HET+KKNEKNICCLDCCISICPHCLSSHRFHRLLQVR
Sbjct: 1   MGIQKPAWLEALYSQKFFVGCSYHETAKKNEKNICCLDCCISICPHCLSSHRFHRLLQVR 60

Query: 61  RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQE 120
           RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQE
Sbjct: 61  RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQE 120

Query: 121 PYVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDDMTNETPRSTVVDY 180
           PYVHCSLGCKV+++++HKRDL SYL+PC+SLPLSMDFLVPQD+GDD+MTNETPRSTVVDY
Sbjct: 121 PYVHCSLGCKVEYLVQHKRDLASYLKPCHSLPLSMDFLVPQDMGDDEMTNETPRSTVVDY 180

Query: 181 DEPMSSSSGSENMSIAQPPIVRKKRSGLCLCGRSTRKI-SSEDIAISMSISRRKGIPHRS 240
           DEPMSSSSGSENMSIAQ  IVRKKRSGLCLCGRS RKI SSED+A S+SISRRKGIPHRS
Sbjct: 181 DEPMSSSSGSENMSIAQTSIVRKKRSGLCLCGRSVRKILSSEDMATSISISRRKGIPHRS 240

Query: 241 PLC 243
           PLC
Sbjct: 241 PLC 243

[Close]

BLAST of Lsi11G003930 vs. TAIR 10
Match: AT2G12646.1 (PLATZ transcription factor family protein )

HSP 1 Score: 365.5 bits (937), Expect = 3.2e-101
Identity = 175/256 (68.36%), Postives = 206/256 (80.47%), Query Frame = 0


Query: 1   MGIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVR 60
           MGIQKPAWL+ALY +KFFVGC +HET+KKNE+N+CCLDCC S+CPHC+ SHRFHRLLQVR
Sbjct: 1   MGIQKPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVR 60

Query: 61  RYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQE 120
           RYVYHDVVRLEDLQKLIDCSNVQ YTINSAKVVFIKKRPQNRQFKG+GNYCTSCDRSLQE
Sbjct: 61  RYVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQE 120

Query: 121 PYVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDD--MTNETPRSTVV 180
           PY+HCSLGCKVDFV+K  RD+T +L+PC++L L  D+++PQD+  DD     ETPRSTVV
Sbjct: 121 PYIHCSLGCKVDFVMKRYRDITPFLKPCHTLTLGPDYIIPQDLLTDDEVAAYETPRSTVV 180

Query: 181 DYDEPMSSSSGSENMSIA---------QPPIVRKKRSGLCLCGRST---RKISSEDIAIS 240
           D DE MS SS S + + A            +VRKKR+G CLC +S    +++S +   IS
Sbjct: 181 DGDESMSWSSASSDNNNAGAAAAYAATTTHVVRKKRTGFCLCAKSANSYKEVSEDPDDIS 240

Query: 241 MSISRRKGIPHRSPLC 243
             I+RRKG+P RSPLC
Sbjct: 241 ACINRRKGVPQRSPLC 256

[Close]

BLAST of Lsi11G003930 vs. TAIR 10
Match: AT3G60670.1 (PLATZ transcription factor family protein )

HSP 1 Score: 238.4 bits (607), Expect = 5.9e-63
Identity = 126/249 (50.60%), Postives = 160/249 (64.26%), Query Frame = 0


Query: 6   PAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRRYVYH 65
           PAWLE L   KFF  C  HE  KKNEKNI C+DCC++ICPHCLSSH  HRLLQ+RRYVY 
Sbjct: 7   PAWLEVLLKDKFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIRRYVYR 66

Query: 66  DVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPYVHC 125
           DV+R+ED  KL+DCS +QPYT NS+KVVFI +RPQ+RQF+GSGN C +CDRSLQ PY+ C
Sbjct: 67  DVLRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFRGSGNICITCDRSLQSPYLFC 126

Query: 126 SLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDDMTNETPRSTV--VDYDEP 185
            L CK+  V+  +R L+ +LR CN L L+           D++T  TP ST+     +  
Sbjct: 127 CLSCKISDVIMRQRGLSGFLRVCNVLDLT-----------DEVTTTTPSSTLEPTGSNRT 186

Query: 186 MSSSSGSENMSI---------AQPPIVRKKRSGL-CLCGRSTRKISSEDIAISMS-ISRR 242
            S SSG+E   +         A   IVRKKRS L   C R T  +S+ +    ++ ++RR
Sbjct: 187 SSESSGNEGEDMFWCQALACTATTEIVRKKRSSLSTTCRRVTEVVSTTNTEAPVNFLNRR 244

[Close]

BLAST of Lsi11G003930 vs. TAIR 10
Match: AT1G31040.1 (PLATZ transcription factor family protein )

HSP 1 Score: 198.4 bits (503), Expect = 6.8e-51
Identity = 113/240 (47.08%), Postives = 143/240 (59.58%), Query Frame = 0


Query: 5   KPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRRYVY 64
           KPAWLE L  + FF  C  HET +K+EKN+ CL CC+S+CPHCL SHR H LLQVRRYVY
Sbjct: 18  KPAWLEGLMAETFFSSCGIHETRRKSEKNVFCLLCCLSVCPHCLPSHRSHPLLQVRRYVY 77

Query: 65  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPYVH 124
           HDVVRL DL+KLIDCS VQPYTIN AKV+F+ +R Q+R  K S N C +CDR LQEP+  
Sbjct: 78  HDVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSRA-KVSSNVCFTCDRILQEPFHF 137

Query: 125 CSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDDM----TNETPRSTVVDY 184
           CSL CKVD++     DL+S L   +    + + L  +  G D +    T E     +V  
Sbjct: 138 CSLSCKVDYLSYQGDDLSSILYRIDESDFTFEGL--RMDGHDQLGEISTMEDGEDILVIS 197

Query: 185 DEPMSSSSGSENMSIAQPPIVRKKRSGLCLCGRSTRKISSEDIAISMSISRRKGIPHRSP 241
           DE   S  G+ +    +    +KK     L G          + +S   +RRKG PHR+P
Sbjct: 198 DE---SEQGNNSHKKEKKKSKKKKPESNYLPG----------MVLSSLGNRRKGAPHRAP 241

[Close]

BLAST of Lsi11G003930 vs. TAIR 10
Match: AT1G76590.1 (PLATZ transcription factor family protein )

HSP 1 Score: 141.0 bits (354), Expect = 1.3e-33
Identity = 93/255 (36.47%), Postives = 129/255 (50.59%), Query Frame = 0


Query: 3   IQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCI-SICPHCLSSHRFHRLLQVRR 62
           +  P WL  +    +F+ CS H  S K+E N+ CLDC   + C +CL +HR HR+LQ+RR
Sbjct: 15  LNPPPWLIPMLRANYFIPCSIHAASNKSECNMFCLDCSSEAFCSYCLLNHRNHRVLQIRR 74

Query: 63  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEP 122
             YH+VVR+ ++QK ID S VQ Y INSA++VF+ +RPQ R  KG  N C  C RSL + 
Sbjct: 75  SSYHNVVRVNEIQKYIDISCVQTYIINSARIVFLNERPQPRIGKGVTNTCEICCRSLLDS 134

Query: 123 YVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPL-----SMDFLVPQDVGD--------DDM 182
           +  CSLGCK+   +K    LT  LR  +         S +   P  +            +
Sbjct: 135 FRFCSLGCKLG-GMKRDPSLTFSLRGKHGREYEGEWESDEATTPTKIRKTCAFNRLMSGL 194

Query: 183 TNETPRSTVVDYDEPMSSSSGSEN---MSIAQPPIVRKKRSGLCLCGRSTRKISSEDIAI 241
           +  T +   +  D+P SSSSG E+   +S   PPI   + S                   
Sbjct: 195 SISTVKCDYLSGDQP-SSSSGDESGFKLSPGTPPIYNHRNS------------------- 244

[Close]

BLAST of Lsi11G003930 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 140.2 bits (352), Expect = 2.2e-33
Identity = 78/177 (44.07%), Postives = 101/177 (57.06%), Query Frame = 0


Query: 6   PAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCIS-ICPHCLSSHRFHRLLQVRRYVY 65
           P WL+ L  +KFFV C  H  S K+E N+ CLDC    +C  CLS H+ H  +Q+RR  Y
Sbjct: 12  PHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSY 71

Query: 66  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPYVH 125
           HDV+R+ ++QK +D + VQ Y INSAKVVF+ +RPQ R  KG  N C  C RSL + +  
Sbjct: 72  HDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVCYRSLVDSFRF 131

Query: 126 CSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVG-----DDDMTNETPRST 177
           CSLGCK+  + K KR   +     N+L  S D      +G     DD M N    ST
Sbjct: 132 CSLGCKISGISKKKRKEWT-----NNLSDSDDSYSSTSIGRLKKNDDIMNNSFTPST 183

The following BLAST results are available for this feature:

BLAST of Lsi11G003930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	4.5e-100	68.36	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Lsi11G003930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C4B1	2.2e-137	97.11	uncharacterized protein LOC103496511 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LI85	1.4e-136	97.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009420 PE=4 SV=1	[more]
A0A1S3C3R2	5.9e-135	97.06	uncharacterized protein LOC103496511 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1CNK9	2.8e-129	91.77	uncharacterized protein LOC111013118 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1FHQ2	3.9e-123	88.07	uncharacterized protein LOC111444245 OS=Cucurbita moschata OX=3662 GN=LOC1114442...	[more]

BLAST of Lsi11G003930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456605.1	4.4e-137	97.11	PREDICTED: uncharacterized protein LOC103496511 isoform X1 [Cucumis melo]	[more]
XP_038889372.1	2.2e-136	97.93	uncharacterized protein LOC120079291 [Benincasa hispida]	[more]
XP_011648727.1	2.9e-136	97.53	uncharacterized protein LOC101202757 [Cucumis sativus] >KGN60754.1 hypothetical ...	[more]
XP_008456613.1	1.2e-134	97.06	PREDICTED: uncharacterized protein LOC103496511 isoform X2 [Cucumis melo]	[more]
XP_022143189.1	5.8e-129	91.77	uncharacterized protein LOC111013118 [Momordica charantia]	[more]

BLAST of Lsi11G003930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G12646.1	3.2e-101	68.36	PLATZ transcription factor family protein	[more]
AT3G60670.1	5.9e-63	50.60	PLATZ transcription factor family protein	[more]
AT1G31040.1	6.8e-51	47.08	PLATZ transcription factor family protein	[more]
AT1G76590.1	1.3e-33	36.47	PLATZ transcription factor family protein	[more]
AT1G32700.1	2.2e-33	44.07	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 60..131 e-value: 3.9E-26 score: 91.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..197
None	No IPR available	PANTHER	PTHR31065:SF11	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 1..242
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 1..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G003930.1	Lsi11G003930.1	mRNA