Lsi11G003370 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G003370
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	BRCA1-associated protein
Location	chr11: 3468190 .. 3474489 (+)
RNA-Seq Expression	Lsi11G003370
Synteny	Lsi11G003370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATAAATTCACCCGACTTCCGCCACCGCGCCTTGTAGATTCTCTCTCCGCTTAGAACCGTCTCCAAGACGGATCCGCCGCCATGTTTTTCCTGCAAGTTCATTCAGTGGACACCGATCACCTTCTCAATATCGGAATTTCGCCGGAAGAATCTTCAACCACCAGCACCATTTCCCAACGAAACAGTACAGCTTCTCACGCCCACACGAAATTTAGCGAACGAAGAGGTATCGTTCACTTATTCCGAAGCATTTCGAACTCATCGCTCCCGAACCCTAGCTCTCAATCCACAATCCTCTTTGTTGTTGCTGTTCCGAACTATCTTTCATACGATGATTTCGTCACCTTCTGTGGCTCTCGCATCAACCATGTCTCCGAGCTTCTCTTCATCAGGTAACCCTTGATATTGCTTGTATTTTCGTTATTTTTTTCTTCTTTATTTTGTTCTTGGTAGCCGATGTATCTACTGATTGATAACAACATCGAGCTGAGCGTTCTTGATTTACTTGGTATTATGATACAAACATACCTCGATTCTGGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATGTTGAATTATGAATAGCGTGTCTGAATAAGGCCAGTGGATAATGAACCTCAAGACTTGAAATCTTTTATTTTCAAGATTCTTTCCTTGATTTCTTTTGGCAATCACGAAGCGCAATTGAGTCGTTGATTGTGAATTTACAATAGCTGTTACGCTGGAATTCTCTTGAGAATTTCTTGTTCTTCTTCTATGCATTGGATGAAACTGTTCACTACGTTAAAGGCGATCATTGGAGTGATGCTTTTCTGAATTTAGTCTGCATATGGTAGAAGGGTGGTTGGTGGCACTTTTGATAACTTTTCTTGTTTTTCACATACTGCGCTCTTGGTTGATGTCCTCTGATGGAATTTTTAGGAATGATGGTGCGGAAGAACGATACAGCGTTTTGATTAAGCTTGAAAATCAAATGGATGCTGATAGGTTTTTTGGCAATTTGAATGGCAAGAAGTTTTCTCCCTCTGAGGTACGATAACTGCAATTTTCGTCGTTTATTTGATTTAATGGAAACATGCTCATATAATATTGCAACATATATTTTTCATTTCTAGGCTGAGGTATGTCATATTCTGTTTCTGATGTCTGTCGAGTACACAGAATCAGCAGAGGTAGCTGGGTCGCCTCCCGACGGATGTACTGAATTGCCTACTTGCCCCGTTTGCCTGGGTGAGTCAAGTGTTTCTGTTTCTTGCCTCCTGACGGATGCTTGATTTATTTTGCTTGAGTTATGAATTCTGATAATCTAATTCTTCTAACCTAATCTGCATTGATTGGTAGAGAGATTTGATCCTGATACGAGTGGGATAATTCACACACTATGTGACCATTCATTTCACTGCCTCTGCATTTCAAAATGGACTTCTTTATCTTGTCAGGTGAGTAACACACTCTGTTCTCTTCTATTATCTTTTTGTACTAGTTTTTTTTTTAGCTATGAACCCTCGCTTGACCAAGAACCTTTATAATTGAGACTTGTTTTTATCATTCTATGTTTTAAATAACTGCATTGTTCTTTCCGGATTGGGGCCCCATTTGTATATGCTCCTTTGTATTCTTTCATCATTCCTAATGAAAGTTTTTTTTTCTTATTCAAAGAGAAAATCCTCCAAAACCTGAAAAGTACTGGTGATTGTTGTGAGCACATCTTAATCCATAAATCCAAAAATACATCGTGATTGAAATGGCAATGAACTTATCTTTACATGACCTCGTCACCTTCTCATGATATGACATAGAACAATAGCTATATCTTACTGCCTTTGAATGTTTTTTTTTCCTTTTTTTTCTGGAACAATTAATACTGTGTAATACAAAAAATTTCGTTAGTATGAGTTATATCTGGTTTTGCTGTTCAAGGGAAACCTTTTAGAATTGGTCAGTTTGCTTGAAAATTGAAAATGTTGTATTGGAATATCACACCATCTTTCTATTTTTGGCAAGTCATCAGGTCTGTCGATTCTGTCAGCAACAGGATGAGAAACAAGCATGCTTCATTTGTGGAACGATGGAGAATCTCTGGGTGTGCGTGATATGTGGCTTTCTAGGATGTGGAAGGTTGCTAATATTTCCTTCTCTTCTTATATATTCTAAGTTGACATATTCAAGAAGACTGCTATCAGCCTATCAGCAAAATACTTCCTGACATTAGTTACTTCCTTTTTGCATCACGTTGATCTTAGGTATAAGGAAGGGCATGCAATCAGGCATTGGAAGAATATGCATCACTGCTATTCTCTTGATTTAAGAACACAGCAAATTTGGGATTATGTTGGTGACACTTATGTTCATCGCTTGAACCAGTCAAAAGTTGATTGTAAGTTTGGGGAGATGAATTCTCACTGTATATCACATGAAGGAGAGTGTGGAACTTGTGAATATGATGAAGACTCCGGAATCAACGAGGCCCTGTACAGCAGCAAAGTTGAAGCAGTACGGTTTTCCGACAAAATTCTTCAGCAAATATATATCATGAATTGAATTCTATCTTTTACTAGTCTGTAGACATGTTTCTGTTAGGCAATTACGGTCTGAGAATTGTATGGACTTAGGACCATAAATTTAATCCATGTGATATTGTGAAGGTTCAAAGGTTGGATAATAGAAATTATCCGCATTGGCATTTAGTATCTTAATCACATTATCCATACAAGAATTGCTTATTCCTAATTCATATATTTCCAAACAGATTGTGGATGAGTATAATCGGCTTCTTGCAACTCAGCTGGAAACTCAGAGACAAGTAATGCAATCTTCTTCCCTACTTTAGATTGGGCTTCTCTAATTTATCTTGCACCTTATTGTATGCATGTTATTTTTGTTAAATAGTTCTTGCTGATTTCAAAATTATCTTTGTCTCCCAATATAAGTTCATGTGAAAACATTTATATAACATTTCAGATTTCTCTGAGAATTTTTTTTCTGAAGTGAAAGTTGAATATTTGACGGCATTGATCTTTTAGTTCTGGTATTTTATAATTGCCATGGACAGACGTAATTATTGGTATATGATGAGACAAGACAAAGTGCACCGCAAATGCTTAAATATGAATGGCTCGTTGTAATTGAGCCTGGCTCCAGCAATGCACAAGTATCCAAGCCTTAAAATTCAGCTTACTCGAGCAAGTTAGCATTGGATCTTTCATGAATCAGTATTTTGGTTTAAAATTGGCCAGATATGTTTCTAAATCGAACAATTACATGTTTCCGAACCCTCCAACACTGTCCTATATCATCATGCCACTTTGAACCATGTATATTGTGGTTTTGAGCGTCTTTTGTATGAACTGTTATCCTAGGTCAACATTTTGCACATCCACGTAATATCTTAATAAATTTCTTATTTAGTTGCTTAAAGTAAAAAGTAAACAAACGGTTGTGCTTATTACTTAAGTTTGACCGATTTCTATCATTGTTTTTTCGTTTCAGCTCTAATTAAGCATTCATATATAGGTGATCAATTTCTTTACTTTTGTTCCGACAGTATTATGAATCTCTGCTGGCAGAGGCCAAAAGCAAAAAGGAAGTTTCCATTTCTGAAGCAGTGGAAGAGGCTTTAATATCCAAGACTCAGGACATTCAAGACAAACTTGAAAAATGTGTCAAGGAGAAAAACGCTGTTTCTGACGTACGTTGTAGTTCAGATGATCACATTTTTTCATGGCCAATGACACGGATCTTTTTATCTTCATCTGTGCCATACAATCATGTGTTTTTCTAAATACTTCCCCTCTAGGTAAATCAGAAGCTCATCAAGAATCAAGAAATGTGGCTGGCTAAAGCAAAGCAAATTGAAGAAAGGTACATTATCTTATAGTCGTTGATTTGAAGGATTTATACGATACCTTGTCTGATAGGATGATATGAAGAAGATGACACAAATAATTAGTTCTTGTGAACTTAGTACAAGAAATTAAGCTGGTGTATTCCGACCTCTTTTAGTCCACAGTTTCCTTTTTTTTTTTCTGCTGCAGCGACCTTTGCTTTTCCACGATACATGAGATTAGCATATATTTGAATGATATTAGCATGAGATGTGGAATTTCGTGGGAGTCTATGCAGGGGGAGAGAGCTAACGTAGCGAGTCTTTGTTCACCACCTGCTTATTGAATAATAGTTTACCAGCGTTGATACTCATTAGTATGGTGTCACTCATTAGTATGGAATGATTATGATGTTATTTGGGATGCTTTTGGTTGTTCCTGGTGTGTCAAAACAACATTAATGATATCTTTGCATCTCTTTTGGTGGGTCATCCTTTTGGTGGTTTTAAAAAGATGATTTGGCTAGCCATTATGTGGGCATTCTTTTGGACTCTTTGGGGGTGAACACAATGGTCGTTTTTTTACAGATTCTTTCTCATCATTTGGTCGCTTTATGGATTTGATTTTGACTATTGCTTTTTAAACTAAGCACCTGTTTATTCATTTTAGTTTATCTTATCTCGTTTCCAATTGGAAATCTATGTTGTAATCACCTATAGGTGGTAGTTTTTCCTATTTCATTTATCAATGAATTGTTTTTTAGTATGGTGTCAGGTTCTCACCTTTGTAGTTAGGTACTATTGGATTAACAAATTACACTTTGTATGACAGAGAACAAGCTTCCTTGAAATCAAGGAACGAGAAAATTCATGATTTGGAAGAACAGGTACTGACATTTAACATCATTTCTAATGCTCGTATGTATTTCATGTCTCACTAATAGCACTTGGCTCTGTTTGAATATGATGTTTACAGATTAGAGATCTTACAGTCTACATTGAAGCTCAAAAGACACTCAACAACATTACAGATTCAGATGACATAAAAGGAGGAACACTCTTGCCTGTACCTGCAAAAGAATCGTCACCCGGCAACGGCAGAAAGAAGAAGGGTAGCCGAAGGCGGAACTAGAGAGAGAGACGCGTGTTCTTGTATTCACTCGCACAGGTTCTGCTTGTAAACATTTTGCTTAAACTAAGGGGAAAATGCTTTCTTTCATCCATGTTCCTTCTATATGATTTGTTGTCTCATGTAAAGCAAGGTATATATTGTATACATCATGTCGATAGAGAGTAGTAGTTCAATCATAGTTTGTCATGTGAAAAACTCTTTTTACTTATTTTTTTTTCCAAGATATTTTGTATTTTTTGTATGCACAAAGATGGGTGCATCTCTATCTTGAGATGCTTCTAAATATTGCTCTTTTATCGGTGTGTAAATATTAGACCTTCCATCTCATTTGTCTGGTTGTTAACCATTGTCATTGTTTTTAAAAGGTAGCTCTTTTGTTTGAC

mRNA sequence

TATAAATTCACCCGACTTCCGCCACCGCGCCTTGTAGATTCTCTCTCCGCTTAGAACCGTCTCCAAGACGGATCCGCCGCCATGTTTTTCCTGCAAGTTCATTCAGTGGACACCGATCACCTTCTCAATATCGGAATTTCGCCGGAAGAATCTTCAACCACCAGCACCATTTCCCAACGAAACAGTACAGCTTCTCACGCCCACACGAAATTTAGCGAACGAAGAGGTATCGTTCACTTATTCCGAAGCATTTCGAACTCATCGCTCCCGAACCCTAGCTCTCAATCCACAATCCTCTTTGTTGTTGCTGTTCCGAACTATCTTTCATACGATGATTTCGTCACCTTCTGTGGCTCTCGCATCAACCATGTCTCCGAGCTTCTCTTCATCAGGAATGATGGTGCGGAAGAACGATACAGCGTTTTGATTAAGCTTGAAAATCAAATGGATGCTGATAGGTTTTTTGGCAATTTGAATGGCAAGAAGTTTTCTCCCTCTGAGGCTGAGGTATGTCATATTCTGTTTCTGATGTCTGTCGAGTACACAGAATCAGCAGAGGTAGCTGGGTCGCCTCCCGACGGATGTACTGAATTGCCTACTTGCCCCGTTTGCCTGGAGAGATTTGATCCTGATACGAGTGGGATAATTCACACACTATGTGACCATTCATTTCACTGCCTCTGCATTTCAAAATGGACTTCTTTATCTTGTCAGGTCTGTCGATTCTGTCAGCAACAGGATGAGAAACAAGCATGCTTCATTTGTGGAACGATGGAGAATCTCTGGGTGTGCGTGATATGTGGCTTTCTAGGATGTGGAAGGTATAAGGAAGGGCATGCAATCAGGCATTGGAAGAATATGCATCACTGCTATTCTCTTGATTTAAGAACACAGCAAATTTGGGATTATGTTGGTGACACTTATGTTCATCGCTTGAACCAGTCAAAAGTTGATTGTAAGTTTGGGGAGATGAATTCTCACTGTATATCACATGAAGGAGAGTGTGGAACTTGTGAATATGATGAAGACTCCGGAATCAACGAGGCCCTGTACAGCAGCAAAGTTGAAGCAATTGTGGATGAGTATAATCGGCTTCTTGCAACTCAGCTGGAAACTCAGAGACAATATTATGAATCTCTGCTGGCAGAGGCCAAAAGCAAAAAGGAAGTTTCCATTTCTGAAGCAGTGGAAGAGGCTTTAATATCCAAGACTCAGGACATTCAAGACAAACTTGAAAAATGTGTCAAGGAGAAAAACGCTGTTTCTGACGTAAATCAGAAGCTCATCAAGAATCAAGAAATGTGGCTGGCTAAAGCAAAGCAAATTGAAGAAAGAGAACAAGCTTCCTTGAAATCAAGGAACGAGAAAATTCATGATTTGGAAGAACAGATTAGAGATCTTACAGTCTACATTGAAGCTCAAAAGACACTCAACAACATTACAGATTCAGATGACATAAAAGGAGGAACACTCTTGCCTGTACCTGCAAAAGAATCGTCACCCGGCAACGGCAGAAAGAAGAAGGGTAGCCGAAGGCGGAACTAGAGAGAGAGACGCGTGTTCTTGTATTCACTCGCACAGGTTCTGCTTGTAAACATTTTGCTTAAACTAAGGGGAAAATGCTTTCTTTCATCCATGTTCCTTCTATATGATTTGTTGTCTCATGTAAAGCAAGGTATATATTGTATACATCATGTCGATAGAGAGTAGTAGTTCAATCATAGTTTGTCATGTGAAAAACTCTTTTTACTTATTTTTTTTTCCAAGATATTTTGTATTTTTTGTATGCACAAAGATGGGTGCATCTCTATCTTGAGATGCTTCTAAATATTGCTCTTTTATCGGTGTGTAAATATTAGACCTTCCATCTCATTTGTCTGGTTGTTAACCATTGTCATTGTTTTTAAAAGGTAGCTCTTTTGTTTGAC

Coding sequence (CDS)

ATGTTTTTCCTGCAAGTTCATTCAGTGGACACCGATCACCTTCTCAATATCGGAATTTCGCCGGAAGAATCTTCAACCACCAGCACCATTTCCCAACGAAACAGTACAGCTTCTCACGCCCACACGAAATTTAGCGAACGAAGAGGTATCGTTCACTTATTCCGAAGCATTTCGAACTCATCGCTCCCGAACCCTAGCTCTCAATCCACAATCCTCTTTGTTGTTGCTGTTCCGAACTATCTTTCATACGATGATTTCGTCACCTTCTGTGGCTCTCGCATCAACCATGTCTCCGAGCTTCTCTTCATCAGGAATGATGGTGCGGAAGAACGATACAGCGTTTTGATTAAGCTTGAAAATCAAATGGATGCTGATAGGTTTTTTGGCAATTTGAATGGCAAGAAGTTTTCTCCCTCTGAGGCTGAGGTATGTCATATTCTGTTTCTGATGTCTGTCGAGTACACAGAATCAGCAGAGGTAGCTGGGTCGCCTCCCGACGGATGTACTGAATTGCCTACTTGCCCCGTTTGCCTGGAGAGATTTGATCCTGATACGAGTGGGATAATTCACACACTATGTGACCATTCATTTCACTGCCTCTGCATTTCAAAATGGACTTCTTTATCTTGTCAGGTCTGTCGATTCTGTCAGCAACAGGATGAGAAACAAGCATGCTTCATTTGTGGAACGATGGAGAATCTCTGGGTGTGCGTGATATGTGGCTTTCTAGGATGTGGAAGGTATAAGGAAGGGCATGCAATCAGGCATTGGAAGAATATGCATCACTGCTATTCTCTTGATTTAAGAACACAGCAAATTTGGGATTATGTTGGTGACACTTATGTTCATCGCTTGAACCAGTCAAAAGTTGATTGTAAGTTTGGGGAGATGAATTCTCACTGTATATCACATGAAGGAGAGTGTGGAACTTGTGAATATGATGAAGACTCCGGAATCAACGAGGCCCTGTACAGCAGCAAAGTTGAAGCAATTGTGGATGAGTATAATCGGCTTCTTGCAACTCAGCTGGAAACTCAGAGACAATATTATGAATCTCTGCTGGCAGAGGCCAAAAGCAAAAAGGAAGTTTCCATTTCTGAAGCAGTGGAAGAGGCTTTAATATCCAAGACTCAGGACATTCAAGACAAACTTGAAAAATGTGTCAAGGAGAAAAACGCTGTTTCTGACGTAAATCAGAAGCTCATCAAGAATCAAGAAATGTGGCTGGCTAAAGCAAAGCAAATTGAAGAAAGAGAACAAGCTTCCTTGAAATCAAGGAACGAGAAAATTCATGATTTGGAAGAACAGATTAGAGATCTTACAGTCTACATTGAAGCTCAAAAGACACTCAACAACATTACAGATTCAGATGACATAAAAGGAGGAACACTCTTGCCTGTACCTGCAAAAGAATCGTCACCCGGCAACGGCAGAAAGAAGAAGGGTAGCCGAAGGCGGAACTAG

Protein sequence

MFFLQVHSVDTDHLLNIGISPEESSTTSTISQRNSTASHAHTKFSERRGIVHLFRSISNSSLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGAEERYSVLIKLENQMDADRFFGNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLERFDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGTMENLWVCVICGFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDCKFGEMNSHCISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSKKEVSISEAVEEALISKTQDIQDKLEKCVKEKNAVSDVNQKLIKNQEMWLAKAKQIEEREQASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGSRRRN

Homology

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BLAST of Lsi11G003370 vs. ExPASy Swiss-Prot
Match: E5KGE0 (BRAP2 RING ZnF UBP domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRIZ1 PE=1 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 8.9e-172
Identity = 300/489 (61.35%), Postives = 382/489 (78.12%), Query Frame = 0


Query: 1   MFFLQVHSVDTDHLLNIGISPEESSTT--STISQRNSTASHAHTKFSERRGIVHLFRSIS 60
           MF L+VHSVD++    I +  EES  T  S  +Q          K ++R+G++HL+R  S
Sbjct: 1   MFILRVHSVDSER--PISVEEEESGFTYASKRAQPPLKLIQPSLKLTDRKGLIHLYRKSS 60

Query: 61  NSSLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGAEERYSVLIKL 120
           +SSLPNPSS+ST LF+VAVPNYLS  DF+ FC SRI+ VS++LFIRNDG E+RYSVLI  
Sbjct: 61  HSSLPNPSSRSTTLFIVAVPNYLSSLDFIRFCDSRISQVSDILFIRNDGMEDRYSVLITF 120

Query: 121 ENQMDADRFFGNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCL 180
            +Q +AD F+ NLNGKKF+PSEAEVCHIL++MSVE+TE  EVA   P G TELPTCP+CL
Sbjct: 121 SDQSEADGFYNNLNGKKFAPSEAEVCHILYVMSVEHTEFDEVAAEAPTGFTELPTCPICL 180

Query: 181 ERFDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGTMENLWVCV 240
           ER DPDTSGI+ TLCDHSF C C SKWT LSCQVCR CQQQDE   C ICG  EN+W C+
Sbjct: 181 ERLDPDTSGIVSTLCDHSFQCSCTSKWTYLSCQVCRLCQQQDEILNCSICGKTENVWACL 240

Query: 241 ICGFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDCKFGEMN 300
           +CGF+GCGRYKEGH+IRHWK  HHCYSLDLRTQQIWDYVGD+YVHRLN SK+D K  EM+
Sbjct: 241 VCGFVGCGRYKEGHSIRHWKETHHCYSLDLRTQQIWDYVGDSYVHRLNHSKIDGKSVEMS 300

Query: 301 SHCISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAK 360
           + C+SH+G+CG CE  ED+GI+ A+++SKV++IV EYN LLA+QL+ QRQYYESL+ EA+
Sbjct: 301 TSCLSHQGDCGLCECSEDTGISGAIFNSKVDSIVIEYNDLLASQLKGQRQYYESLIVEAR 360

Query: 361 SKKEVSISEAVEEALISKTQDIQDKLEKCVKEKNAVSDVNQKLIKNQEMWLAKAKQIEER 420
           SK+E SI+EAVE+ +++  Q++Q+K+EKC +EK+ +++VN KLIK Q+ W  KAK+IEER
Sbjct: 361 SKQESSIAEAVEQIVVNTMQELQNKIEKCEEEKSGITEVNTKLIKEQDTWRKKAKEIEER 420

Query: 421 EQASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNI-TDSDDIKGGTLLPVPAKESSPGNG 480
           E A L S++E I DL+EQIRD+TV+IEA+KTL  + +D+D I+ GT+LPVP       + 
Sbjct: 421 EAALLGSKDEMITDLQEQIRDITVFIEAKKTLKKMSSDTDGIREGTVLPVPISPEPVSSV 480

Query: 481 RKKKGSRRR 487
           R++K S RR
Sbjct: 481 RRQKKSNRR 487

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BLAST of Lsi11G003370 vs. ExPASy Swiss-Prot
Match: O80996 (BRAP2 RING ZnF UBP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BRIZ2 PE=1 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 9.0e-116
Identity = 206/461 (44.69%), Postives = 300/461 (65.08%), Query Frame = 0


Query: 38  SHAHTKFSERRGIVHLF------RSISNSSLPNPSSQSTILFVVAVPNYLSYDDFVTFCG 97
           S  + +  E RG++HL        S S+SS   P  ++ ++ V+ VPN+++Y DF  FCG
Sbjct: 22  SSGNPRIGETRGVMHLISDNAVSSSSSSSSSNLPIGRNPLVCVLGVPNHMTYADFCQFCG 81

Query: 98  SRINHVSELLFIRNDGAEERYSVLIKLENQMDADRFFGNLNGKKFSPSEAEVCHILFLMS 157
           S I H+ ++  +RND  E RYS+LI+ ++Q   D FF +  GK+F+  + +VC +LF + 
Sbjct: 82  SFIQHILDMRTVRNDDIENRYSILIRFDSQESTDTFFQHFRGKQFNSLDEDVCRLLFALD 141

Query: 158 VEYT-ESAEVAGSPPD--GCTELPTCPVCLERFDPDTSGIIHTLCDHSFHCLCISKWTSL 217
           V++T  S  +  + P   G  E PTCPVCLER D DT GI+ T+C+HSFHC CIS W   
Sbjct: 142 VQFTGYSGSIDHTQPSAAGPIEQPTCPVCLERLDQDTGGILTTMCNHSFHCSCISNWPDS 201

Query: 218 SCQVCRFCQQQDEKQACFICGTMENLWVCVICGFLGCGRYKEGHAIRHWKNMHHCYSLDL 277
           SC VCR+CQQQ E   C +C T ENLW+CVICG +GCGRYKEGHA RHW+   HCYSL+L
Sbjct: 202 SCPVCRYCQQQPENSVCCVCQTTENLWMCVICGVVGCGRYKEGHARRHWEETEHCYSLEL 261

Query: 278 RTQQIWDYVGDTYVHRLNQSKVDCKFGEMNSHCISHEGECGTCEYDEDSGINEALYSSKV 337
            TQ++WDY GD YVHRL QSK D K  E+NSH    +  CG+CEY  DSG+ +AL +SKV
Sbjct: 262 ETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHGSLSKDGCGSCEY-SDSGMTDALLNSKV 321

Query: 338 EAIVDEYNRLLATQLETQRQYYESLLAEAKSKKEVSISEAVEEALISKTQDIQDKLEKCV 397
           + I+ EYN LL  QLE Q+QY+E LL   K + E  ISEA  +A+  + Q +Q + ++CV
Sbjct: 322 DMIISEYNELLQAQLENQKQYFEKLLQNVKEETEQKISEAASKAISQRLQKLQTRFDRCV 381

Query: 398 KEKNAVSDVNQKLIKNQEMWLAKAKQIEEREQASLKSRNEKIHDLEEQIRDLTVYIEAQK 457
           KEK  + D+N+ L+KN+++W  K  +++ERE+ ++++++EKI  LEEQ+ +L   ++ + 
Sbjct: 382 KEKQFLEDLNENLVKNKDVWSTKITEMKEREKKAVRAKDEKIQGLEEQLGNLMAQMDGE- 441

Query: 458 TLNNITDSDDIKGGTLLPVPAKESSPGN---GRKKKGSRRR 487
             + ++++ +++  T+       S  GN     KKK +RR+
Sbjct: 442 --SEVSETKEVQDATVSTTNTSSSGAGNVIHANKKKSNRRK 478

[Close]

BLAST of Lsi11G003370 vs. ExPASy Swiss-Prot
Match: Q7Z569 (BRCA1-associated protein OS=Homo sapiens OX=9606 GN=BRAP PE=1 SV=2)

HSP 1 Score: 260.0 bits (663), Expect = 5.4e-68
Identity = 157/471 (33.33%), Postives = 252/471 (53.50%), Query Frame = 0


Query: 49  GIVHLFRSISNSSLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGA 108
           GI+HL+++   +SL     +S +L ++ VP  ++  D + F  +  N V E + I  D  
Sbjct: 140 GIMHLYKTNKMTSLKEDVRRSAMLCILTVPAAMTSHDLMKFV-APFNEVIEQMKIIRDST 199

Query: 109 EERYSVLIKLENQMDADRFFGNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGC 168
             +Y VLIK   Q DAD F+   NG++F+  E +VC ++++   E  +S + A  P    
Sbjct: 200 PNQYMVLIKFRAQADADSFYMTCNGRQFNSIEDDVCQLVYVERAEVLKSEDGASLPVMDL 259

Query: 169 TELPTCPVCLERFDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQD--EKQACF 228
           TELP C VCLER D   +GI+ TLC+HSFH  C+ +W   +C VCR+CQ  +  E+  CF
Sbjct: 260 TELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTTCPVCRYCQTPEPVEENKCF 319

Query: 229 ICGTMENLWVCVICGFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLN 288
            CG  ENLW+C+ICG +GCGRY   HA +H++   H Y++ L   ++WDY GD YVHRL 
Sbjct: 320 ECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAGDNYVHRLV 379

Query: 289 QSKVDCKFGEMNSHCISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQ 348
            SK D K        + +E E  TC+              K++A+  EY+ LL +QLE+Q
Sbjct: 380 ASKTDGKI-------VQYECEGDTCQ------------EEKIDALQLEYSYLLTSQLESQ 439

Query: 349 RQYYESLLA--EAKSKKEVSISEAVEEALISKTQDIQDKLEKCVKEKNAV---------- 408
           R Y+E+ +   E  + +E++  +   +  I K  +++ KL   +KEK +V          
Sbjct: 440 RIYWENKIVRIEKDTAEEINNMKTKFKETIEKCDNLEHKLNDLLKEKQSVERKCTQLNTK 499

Query: 409 -----------SDVNQKLIKNQEMWLAKAKQIEEREQASLKSRNEKIHDLEEQIRDLTVY 468
                       ++N+ L  NQ +   K K+ E   + +   ++ +I +++EQ+RD+  Y
Sbjct: 500 VAKLTNELKEEQEMNKCLRANQVLLQNKLKEEERVLKETCDQKDLQITEIQEQLRDVMFY 559

Query: 469 IEAQKTLNNI--TDSDDIKGGTLLPVPAKESSP----GNGR--KKKGSRRR 487
           +E Q+ +N++      +I+ G +    A  SSP    G+G+   +KG  +R
Sbjct: 560 LETQQKINHLPAETRQEIQEGQINIAMASASSPASSGGSGKLPSRKGRSKR 590

[Close]

BLAST of Lsi11G003370 vs. ExPASy Swiss-Prot
Match: Q99MP8 (BRCA1-associated protein OS=Mus musculus OX=10090 GN=Brap PE=1 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.5e-65
Identity = 152/471 (32.27%), Postives = 249/471 (52.87%), Query Frame = 0


Query: 49  GIVHLFRSISNSSLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGA 108
           GI+HL+++   +SL     +S +L V+ VP  ++  D + F  +  N V E + I  D  
Sbjct: 139 GIMHLYKTNKMTSLKEDVRRSAMLCVLTVPATMTSHDLMKFV-APFNDVIEQMKIIRDST 198

Query: 109 EERYSVLIKLENQMDADRFFGNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGC 168
             +Y VLIK   Q DAD F+   NG++F+  E +VC ++++   E  +S + A  P    
Sbjct: 199 PNQYMVLIKFSAQADADSFYMACNGRQFNSIEDDVCQLVYVERAEVLKSEDGASLPVMDL 258

Query: 169 TELPTCPVCLERFDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQD--EKQACF 228
           TELP C VCLER D   +GI+ TLC+HSFH  C+ +W   +C VCR+CQ  +  E+  CF
Sbjct: 259 TELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTTCPVCRYCQTPEPVEENKCF 318

Query: 229 ICGTMENLWVCVICGFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLN 288
            CG  ENLW+C+ICG +GCGRY   HA +H++   H Y++ L   ++WDY GD YVHRL 
Sbjct: 319 ECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAGDNYVHRLV 378

Query: 289 QSKVDCKFGEMNSHCISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQ 348
            SK D K        + +E E  TC+              K++A+  EY+ LL +QLE+Q
Sbjct: 379 ASKTDGKI-------VQYECEGDTCQ------------EEKIDALQLEYSYLLTSQLESQ 438

Query: 349 RQYYESLLA--EAKSKKEVSISEAVEEALISKTQDIQDKLEKCVKEKNAV---------- 408
           R Y+E+ +   E  + +E++  +   +  I K   ++ +L   +KEK +V          
Sbjct: 439 RIYWENKIVRIEKDTAEEINNMKTKFKETIEKCDSLELRLSDLLKEKQSVERKCTQLNTR 498

Query: 409 -----------SDVNQKLIKNQEMWLAKAKQIEEREQASLKSRNEKIHDLEEQIRDLTVY 468
                       ++N+ L  NQ +   + K+ E+  + +   ++ +I +++EQ+RD+  Y
Sbjct: 499 VAKLSTELQEEQELNKCLRANQLVLQNQLKEEEKLLKETCAQKDLQITEIQEQLRDVMFY 558

Query: 469 IEAQKTLNNI--TDSDDIKGGTL------LPVPAKESSPGNGRKKKGSRRR 487
           +E Q+ ++++      +I+ G +       P P    + G  + +KG  +R
Sbjct: 559 LETQQQISHLPAETRQEIQEGQINIAMASAPNPPSSGAGGKLQSRKGRSKR 589

[Close]

BLAST of Lsi11G003370 vs. ExPASy Swiss-Prot
Match: P38748 (RING finger protein ETP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ETP1 PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.5e-57
Identity = 154/498 (30.92%), Postives = 247/498 (49.60%), Query Frame = 0


Query: 49  GIVHLFR-SISNSSLPNPS-----SQSTILFVVAVPNYLSYDDFVTF-CGSRI--NHVSE 108
           GI+ LF+ S +N++L            T++ ++ VP Y +  D + F  G  I    VS 
Sbjct: 86  GIIRLFKLSNANNTLNEKEILTIPGDDTMICILFVPTYFTVHDLLHFYIGDDIVNKQVSN 145

Query: 109 LLFIRND--GAEERYSVLIKLENQMDADRFFGNLNGKKFSPSEAEVCHILFLMSVEY--- 168
              +RN   G    ++VLIK  N +DA  F    NGK FS  + E CH++ +  + +   
Sbjct: 146 FRILRNQQKGMGFNFTVLIKFRNALDAKNFKEEFNGKSFSRMDPETCHVISVKEIVFQKK 205

Query: 169 ---------------TESAEVAGSPPDGCTELPTCPVCLERFDPDTSGIIHTLCDHSFHC 228
                          T+   V         ELPTCPVCLER D +T+G++   C H+FHC
Sbjct: 206 LFQRPAANEDFPYLLTDPFTVKKKKELVKVELPTCPVCLERMDSETTGLVTIPCQHTFHC 265

Query: 229 LCISKWTSLSCQVCR----------FCQQQDEKQACFICGTMENLWVCVICGFLGCGRYK 288
            C++KW +  C VCR            +Q  +   C  CG+ +NLW+C+ICG +GCGRY 
Sbjct: 266 QCLNKWKNSRCPVCRHSSLRLSRESLLKQAGDSAHCATCGSTDNLWICLICGNVGCGRYN 325

Query: 289 EGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDCKF------GEMNSHCIS 348
             HAI+H++   HC+++D+RTQ++WDY GD YVHRL Q++VD K       G+ +++ I 
Sbjct: 326 SKHAIKHYEETLHCFAMDIRTQRVWDYAGDNYVHRLVQNEVDGKLVEVGGSGDDDNNDIG 385

Query: 349 HEGECGTCEYDEDSGINEALYSSKVEAIVD-----------EYNRLLATQLETQRQYYES 408
           +  E     Y   S   E   S+K +  +            EY ++L +QLE+QR+YYE 
Sbjct: 386 NSDELQNVVYGNRSKNGEKSNSNKKDGELAANFLRHREYHLEYVQVLISQLESQREYYEL 445

Query: 409 LLAE----AKSKKEVSISEAVEEALISKTQDIQDKLEKCVKEKNAVSDVNQKLIKNQEMW 468
            L E    A     V   +   E L  + Q  Q + +K    + +  + +  +I+  +  
Sbjct: 446 KLQEKDQTASDSSNVESLKKSMEDLKLQFQVTQKEWQKREMAQKSKLEEDMLVIEGLQAN 505

Query: 469 LAKAKQIEEREQASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVP 487
           L    + +E+ +   K+  E   DLEEQ++DL  Y+++Q+   +  +S  +K GT+L   
Sbjct: 506 LDHLSKKQEQLERENKALEESKQDLEEQVKDLMFYLDSQEKFKDADES--VKEGTILIQQ 565

[Close]

BLAST of Lsi11G003370 vs. ExPASy TrEMBL
Match: A0A5D3BF17 (BRCA1-associated protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00750 PE=4 SV=1)

HSP 1 Score: 928.3 bits (2398), Expect = 1.3e-266
Identity = 458/487 (94.05%), Postives = 470/487 (96.51%), Query Frame = 0


Query: 1   MFFLQVHSVDTDHLLNIGISPEESSTTSTISQRNSTASHAHTKFSERRGIVHLFRSISNS 60
           MFFLQVH+VDTDH L +GI P+ESSTTSTISQRNS ASHAHTKF ERRGIVHLFRS+SNS
Sbjct: 1   MFFLQVHTVDTDHPLTVGIPPDESSTTSTISQRNSIASHAHTKFCERRGIVHLFRSVSNS 60

Query: 61  SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGAEERYSVLIKLEN 120
           SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDG EERYSVLIKL N
Sbjct: 61  SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGVEERYSVLIKLGN 120

Query: 121 QMDADRFFGNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180
             DADRFF NLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER
Sbjct: 121 LTDADRFFSNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180

Query: 181 FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGTMENLWVCVIC 240
           FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGT+ENLWVCVIC
Sbjct: 181 FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGTVENLWVCVIC 240

Query: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDCKFGEMNSH 300
           GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGD YVHRLNQSKVDCKFGEMN H
Sbjct: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDNYVHRLNQSKVDCKFGEMNPH 300

Query: 301 CISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360
           C+SHEGECGTCEYDE+SG N+ALY SKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK
Sbjct: 301 CMSHEGECGTCEYDENSGFNDALYHSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360

Query: 361 KEVSISEAVEEALISKTQDIQDKLEKCVKEKNAVSDVNQKLIKNQEMWLAKAKQIEEREQ 420
           KE+SISEAVEEALISKTQDIQDKLEKCVKEKN VS+VNQKLIKNQEMWLAKAKQIEERE 
Sbjct: 361 KEISISEAVEEALISKTQDIQDKLEKCVKEKNTVSEVNQKLIKNQEMWLAKAKQIEEREL 420

Query: 421 ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKK 480
           ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSP NGRKK
Sbjct: 421 ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPANGRKK 480

Query: 481 KGSRRRN 488
           KG+RRR+
Sbjct: 481 KGNRRRS 487

[Close]

BLAST of Lsi11G003370 vs. ExPASy TrEMBL
Match: A0A1S3C5L6 (BRCA1-associated protein OS=Cucumis melo OX=3656 GN=LOC103496733 PE=4 SV=1)

HSP 1 Score: 928.3 bits (2398), Expect = 1.3e-266
Identity = 458/487 (94.05%), Postives = 470/487 (96.51%), Query Frame = 0


Query: 1   MFFLQVHSVDTDHLLNIGISPEESSTTSTISQRNSTASHAHTKFSERRGIVHLFRSISNS 60
           MFFLQVH+VDTDH L +GI P+ESSTTSTISQRNS ASHAHTKF ERRGIVHLFRS+SNS
Sbjct: 1   MFFLQVHTVDTDHPLTVGIPPDESSTTSTISQRNSIASHAHTKFCERRGIVHLFRSVSNS 60

Query: 61  SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGAEERYSVLIKLEN 120
           SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDG EERYSVLIKL N
Sbjct: 61  SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGVEERYSVLIKLGN 120

Query: 121 QMDADRFFGNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180
             DADRFF NLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER
Sbjct: 121 LTDADRFFSNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180

Query: 181 FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGTMENLWVCVIC 240
           FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGT+ENLWVCVIC
Sbjct: 181 FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGTVENLWVCVIC 240

Query: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDCKFGEMNSH 300
           GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGD YVHRLNQSKVDCKFGEMN H
Sbjct: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDNYVHRLNQSKVDCKFGEMNPH 300

Query: 301 CISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360
           C+SHEGECGTCEYDE+SG N+ALY SKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK
Sbjct: 301 CMSHEGECGTCEYDENSGFNDALYHSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360

Query: 361 KEVSISEAVEEALISKTQDIQDKLEKCVKEKNAVSDVNQKLIKNQEMWLAKAKQIEEREQ 420
           KE+SISEAVEEALISKTQDIQDKLEKCVKEKN VS+VNQKLIKNQEMWLAKAKQIEERE 
Sbjct: 361 KEISISEAVEEALISKTQDIQDKLEKCVKEKNTVSEVNQKLIKNQEMWLAKAKQIEEREL 420

Query: 421 ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKK 480
           ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSP NGRKK
Sbjct: 421 ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPANGRKK 480

Query: 481 KGSRRRN 488
           KG+RRR+
Sbjct: 481 KGNRRRS 487

[Close]

BLAST of Lsi11G003370 vs. ExPASy TrEMBL
Match: A0A0A0LIZ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G007410 PE=4 SV=1)

HSP 1 Score: 919.8 bits (2376), Expect = 4.6e-264
Identity = 455/487 (93.43%), Postives = 470/487 (96.51%), Query Frame = 0


Query: 1   MFFLQVHSVDTDHLLNIGISPEESSTTSTISQRNSTASHAHTKFSERRGIVHLFRSISNS 60
           MFFLQVH+VD DH L +GI  +ESSTTSTISQRNSTASHA+TKF ERRGIVHLFRS+SNS
Sbjct: 1   MFFLQVHTVDNDHPLTVGIPLDESSTTSTISQRNSTASHANTKFCERRGIVHLFRSVSNS 60

Query: 61  SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGAEERYSVLIKLEN 120
           SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDG EERYSVLIKL N
Sbjct: 61  SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGVEERYSVLIKLGN 120

Query: 121 QMDADRFFGNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180
            +DAD+FF NLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER
Sbjct: 121 LIDADKFFSNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180

Query: 181 FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGTMENLWVCVIC 240
           FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRF QQQDEKQACFICGT+ENLWVCVIC
Sbjct: 181 FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFFQQQDEKQACFICGTVENLWVCVIC 240

Query: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDCKFGEMNSH 300
           GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGD YVHRLNQSKVDCKFGEMN H
Sbjct: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDNYVHRLNQSKVDCKFGEMNPH 300

Query: 301 CISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360
           C+SHEGECGTCEYDE+SGINEALY SKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK
Sbjct: 301 CMSHEGECGTCEYDENSGINEALYHSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360

Query: 361 KEVSISEAVEEALISKTQDIQDKLEKCVKEKNAVSDVNQKLIKNQEMWLAKAKQIEEREQ 420
           KE+SISEAVEEALISKTQDIQDKLEKCVKE N VS+VNQKL+KNQEMWLAKAKQIEERE 
Sbjct: 361 KEISISEAVEEALISKTQDIQDKLEKCVKETNTVSEVNQKLVKNQEMWLAKAKQIEEREL 420

Query: 421 ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKK 480
           ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKK
Sbjct: 421 ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKK 480

Query: 481 KGSRRRN 488
           KG+RRR+
Sbjct: 481 KGNRRRS 487

[Close]

BLAST of Lsi11G003370 vs. ExPASy TrEMBL
Match: A0A6J1KCX7 (BRCA1-associated protein OS=Cucurbita maxima OX=3661 GN=LOC111493779 PE=4 SV=1)

HSP 1 Score: 916.0 bits (2366), Expect = 6.7e-263
Identity = 455/487 (93.43%), Postives = 469/487 (96.30%), Query Frame = 0


Query: 1   MFFLQVHSVDTDHLLNIGISPEESSTTSTISQRNSTASHAHTKFSERRGIVHLFRSISNS 60
           MFFLQVHSVDTD  L +GISPE+SSTTST+SQRNSTAS+ HTKFSERRGI+HLFRSIS+S
Sbjct: 1   MFFLQVHSVDTDQPLTVGISPEQSSTTSTVSQRNSTASYVHTKFSERRGIIHLFRSISHS 60

Query: 61  SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGAEERYSVLIKLEN 120
           SLPNPSSQSTILFVVAVPNYLSYDDF+ FCGSRINHVSELLFIRNDG EERYSVLIKL N
Sbjct: 61  SLPNPSSQSTILFVVAVPNYLSYDDFINFCGSRINHVSELLFIRNDGMEERYSVLIKLGN 120

Query: 121 QMDADRFFGNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180
           QMDAD FFG+LNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER
Sbjct: 121 QMDADGFFGSLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180

Query: 181 FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGTMENLWVCVIC 240
           FDPDTSGIIHTLCDHSFHC CISKWTSLSCQVCRFCQQQDEKQACFICGT+ENLWVCVIC
Sbjct: 181 FDPDTSGIIHTLCDHSFHCPCISKWTSLSCQVCRFCQQQDEKQACFICGTLENLWVCVIC 240

Query: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDCKFGEMNSH 300
           GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVD KFGEMNSH
Sbjct: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDGKFGEMNSH 300

Query: 301 CISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360
           CISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK
Sbjct: 301 CISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360

Query: 361 KEVSISEAVEEALISKTQDIQDKLEKCVKEKNAVSDVNQKLIKNQEMWLAKAKQIEEREQ 420
           +EVS+SEAVEEALISKTQDI DKLE CVKE N VSDVNQKLIKNQEMW+AKAKQ+EERE 
Sbjct: 361 REVSVSEAVEEALISKTQDIHDKLENCVKEINVVSDVNQKLIKNQEMWMAKAKQVEEREL 420

Query: 421 ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKK 480
           ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLN ITDSDDIKGGTLLPVPAKESSP +GR K
Sbjct: 421 ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNKITDSDDIKGGTLLPVPAKESSPSSGR-K 480

Query: 481 KGSRRRN 488
           KGSRRRN
Sbjct: 481 KGSRRRN 486

[Close]

BLAST of Lsi11G003370 vs. ExPASy TrEMBL
Match: A0A6J1G3B0 (BRCA1-associated protein OS=Cucurbita moschata OX=3662 GN=LOC111450386 PE=4 SV=1)

HSP 1 Score: 913.7 bits (2360), Expect = 3.3e-262
Identity = 453/487 (93.02%), Postives = 466/487 (95.69%), Query Frame = 0


Query: 1   MFFLQVHSVDTDHLLNIGISPEESSTTSTISQRNSTASHAHTKFSERRGIVHLFRSISNS 60
           MFF+QVHSVDTD  L +GI PE+SSTTST+SQRNSTAS+ HTKFSERRGI+HLFRSIS+S
Sbjct: 1   MFFVQVHSVDTDQPLTVGIWPEQSSTTSTVSQRNSTASYVHTKFSERRGIIHLFRSISHS 60

Query: 61  SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGAEERYSVLIKLEN 120
           SLPNPSSQSTILFVVAVPNYLSYDDF+ FCGSRINHVSELLFIRNDG EERYSVLIKL N
Sbjct: 61  SLPNPSSQSTILFVVAVPNYLSYDDFINFCGSRINHVSELLFIRNDGMEERYSVLIKLGN 120

Query: 121 QMDADRFFGNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180
           QMDAD FFG LNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER
Sbjct: 121 QMDADGFFGRLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180

Query: 181 FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGTMENLWVCVIC 240
           FDPDTSGIIHTLCDHSFHC CISKWTSLSCQVCRFCQQQDEKQACFICGT ENLWVCVIC
Sbjct: 181 FDPDTSGIIHTLCDHSFHCPCISKWTSLSCQVCRFCQQQDEKQACFICGTTENLWVCVIC 240

Query: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDCKFGEMNSH 300
           GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVD KFGEMNSH
Sbjct: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDGKFGEMNSH 300

Query: 301 CISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360
           CISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK
Sbjct: 301 CISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360

Query: 361 KEVSISEAVEEALISKTQDIQDKLEKCVKEKNAVSDVNQKLIKNQEMWLAKAKQIEEREQ 420
           +EVS+SEAVEEALISKTQDI DKLE CVKEKN VSDVNQKLIKNQEMW+AKAKQIEERE 
Sbjct: 361 REVSVSEAVEEALISKTQDIHDKLENCVKEKNVVSDVNQKLIKNQEMWMAKAKQIEEREL 420

Query: 421 ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKK 480
           ASLK RNEKIHDLEEQIRDLTVYIEAQKTLN IT SDDIKGGT+LPVPAKESSP +GRKK
Sbjct: 421 ASLKWRNEKIHDLEEQIRDLTVYIEAQKTLNKITGSDDIKGGTVLPVPAKESSPSSGRKK 480

Query: 481 KGSRRRN 488
           KGSRRRN
Sbjct: 481 KGSRRRN 487

[Close]

BLAST of Lsi11G003370 vs. NCBI nr
Match: XP_038889999.1 (BRAP2 RING ZnF UBP domain-containing protein 1 [Benincasa hispida])

HSP 1 Score: 935.6 bits (2417), Expect = 1.7e-268
Identity = 465/487 (95.48%), Postives = 474/487 (97.33%), Query Frame = 0


Query: 1   MFFLQVHSVDTDHLLNIGISPEESSTTSTISQRNSTASHAHTKFSERRGIVHLFRSISNS 60
           MFFLQVHSVDTDH + I ISP+E+STTSTISQRNSTASH+HTKFSERRGIVHLFRSIS S
Sbjct: 1   MFFLQVHSVDTDHPITIEISPDETSTTSTISQRNSTASHSHTKFSERRGIVHLFRSISKS 60

Query: 61  SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGAEERYSVLIKLEN 120
           SLPNPSSQSTILFVVAVPNYLSYDDFVT CGSRINHVSELLFIRNDG EERYSVLIKLEN
Sbjct: 61  SLPNPSSQSTILFVVAVPNYLSYDDFVTVCGSRINHVSELLFIRNDGVEERYSVLIKLEN 120

Query: 121 QMDADRFFGNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180
           QMDAD FFG LNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER
Sbjct: 121 QMDADGFFGTLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180

Query: 181 FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGTMENLWVCVIC 240
           FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGT+ENLWVCVIC
Sbjct: 181 FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGTVENLWVCVIC 240

Query: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDCKFGEMNSH 300
           GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDCKFGEMNSH
Sbjct: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDCKFGEMNSH 300

Query: 301 CISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360
           C+SHEGECGTCE++EDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK
Sbjct: 301 CMSHEGECGTCEFNEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360

Query: 361 KEVSISEAVEEALISKTQDIQDKLEKCVKEKNAVSDVNQKLIKNQEMWLAKAKQIEEREQ 420
           KEVSISEAVEEALISKTQDIQDKLEKCVKEKN VSDVNQKLIKNQE+WLAKAKQIEERE 
Sbjct: 361 KEVSISEAVEEALISKTQDIQDKLEKCVKEKNIVSDVNQKLIKNQEIWLAKAKQIEEREL 420

Query: 421 ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKK 480
           A LK RNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSP NGRKK
Sbjct: 421 ALLKLRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPSNGRKK 480

Query: 481 KGSRRRN 488
           KGSRRRN
Sbjct: 481 KGSRRRN 487

[Close]

BLAST of Lsi11G003370 vs. NCBI nr
Match: XP_008456935.1 (PREDICTED: BRCA1-associated protein [Cucumis melo] >KAA0063536.1 BRCA1-associated protein [Cucumis melo var. makuwa] >TYJ97863.1 BRCA1-associated protein [Cucumis melo var. makuwa])

HSP 1 Score: 928.3 bits (2398), Expect = 2.7e-266
Identity = 458/487 (94.05%), Postives = 470/487 (96.51%), Query Frame = 0


Query: 1   MFFLQVHSVDTDHLLNIGISPEESSTTSTISQRNSTASHAHTKFSERRGIVHLFRSISNS 60
           MFFLQVH+VDTDH L +GI P+ESSTTSTISQRNS ASHAHTKF ERRGIVHLFRS+SNS
Sbjct: 1   MFFLQVHTVDTDHPLTVGIPPDESSTTSTISQRNSIASHAHTKFCERRGIVHLFRSVSNS 60

Query: 61  SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGAEERYSVLIKLEN 120
           SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDG EERYSVLIKL N
Sbjct: 61  SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGVEERYSVLIKLGN 120

Query: 121 QMDADRFFGNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180
             DADRFF NLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER
Sbjct: 121 LTDADRFFSNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180

Query: 181 FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGTMENLWVCVIC 240
           FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGT+ENLWVCVIC
Sbjct: 181 FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGTVENLWVCVIC 240

Query: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDCKFGEMNSH 300
           GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGD YVHRLNQSKVDCKFGEMN H
Sbjct: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDNYVHRLNQSKVDCKFGEMNPH 300

Query: 301 CISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360
           C+SHEGECGTCEYDE+SG N+ALY SKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK
Sbjct: 301 CMSHEGECGTCEYDENSGFNDALYHSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360

Query: 361 KEVSISEAVEEALISKTQDIQDKLEKCVKEKNAVSDVNQKLIKNQEMWLAKAKQIEEREQ 420
           KE+SISEAVEEALISKTQDIQDKLEKCVKEKN VS+VNQKLIKNQEMWLAKAKQIEERE 
Sbjct: 361 KEISISEAVEEALISKTQDIQDKLEKCVKEKNTVSEVNQKLIKNQEMWLAKAKQIEEREL 420

Query: 421 ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKK 480
           ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSP NGRKK
Sbjct: 421 ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPANGRKK 480

Query: 481 KGSRRRN 488
           KG+RRR+
Sbjct: 481 KGNRRRS 487

[Close]

BLAST of Lsi11G003370 vs. NCBI nr
Match: XP_004139299.1 (BRAP2 RING ZnF UBP domain-containing protein 1 [Cucumis sativus] >KGN60697.1 hypothetical protein Csa_019257 [Cucumis sativus])

HSP 1 Score: 919.8 bits (2376), Expect = 9.5e-264
Identity = 455/487 (93.43%), Postives = 470/487 (96.51%), Query Frame = 0


Query: 1   MFFLQVHSVDTDHLLNIGISPEESSTTSTISQRNSTASHAHTKFSERRGIVHLFRSISNS 60
           MFFLQVH+VD DH L +GI  +ESSTTSTISQRNSTASHA+TKF ERRGIVHLFRS+SNS
Sbjct: 1   MFFLQVHTVDNDHPLTVGIPLDESSTTSTISQRNSTASHANTKFCERRGIVHLFRSVSNS 60

Query: 61  SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGAEERYSVLIKLEN 120
           SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDG EERYSVLIKL N
Sbjct: 61  SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGVEERYSVLIKLGN 120

Query: 121 QMDADRFFGNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180
            +DAD+FF NLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER
Sbjct: 121 LIDADKFFSNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180

Query: 181 FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGTMENLWVCVIC 240
           FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRF QQQDEKQACFICGT+ENLWVCVIC
Sbjct: 181 FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFFQQQDEKQACFICGTVENLWVCVIC 240

Query: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDCKFGEMNSH 300
           GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGD YVHRLNQSKVDCKFGEMN H
Sbjct: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDNYVHRLNQSKVDCKFGEMNPH 300

Query: 301 CISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360
           C+SHEGECGTCEYDE+SGINEALY SKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK
Sbjct: 301 CMSHEGECGTCEYDENSGINEALYHSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360

Query: 361 KEVSISEAVEEALISKTQDIQDKLEKCVKEKNAVSDVNQKLIKNQEMWLAKAKQIEEREQ 420
           KE+SISEAVEEALISKTQDIQDKLEKCVKE N VS+VNQKL+KNQEMWLAKAKQIEERE 
Sbjct: 361 KEISISEAVEEALISKTQDIQDKLEKCVKETNTVSEVNQKLVKNQEMWLAKAKQIEEREL 420

Query: 421 ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKK 480
           ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKK
Sbjct: 421 ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKK 480

Query: 481 KGSRRRN 488
           KG+RRR+
Sbjct: 481 KGNRRRS 487

[Close]

BLAST of Lsi11G003370 vs. NCBI nr
Match: XP_023547244.1 (BRCA1-associated protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 918.7 bits (2373), Expect = 2.1e-263
Identity = 455/487 (93.43%), Postives = 468/487 (96.10%), Query Frame = 0


Query: 1   MFFLQVHSVDTDHLLNIGISPEESSTTSTISQRNSTASHAHTKFSERRGIVHLFRSISNS 60
           MFF+QVHSVDTD  L +GISPE+SSTTST+SQRNSTAS+ HTKFSERRGI+HLFRSIS+S
Sbjct: 1   MFFVQVHSVDTDQPLAVGISPEQSSTTSTVSQRNSTASYVHTKFSERRGIIHLFRSISHS 60

Query: 61  SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGAEERYSVLIKLEN 120
           SLPNPSSQSTILFVVAVPNYLSYDDF+ FCGSRINHVSELLFIRNDG EERYSVLIKL N
Sbjct: 61  SLPNPSSQSTILFVVAVPNYLSYDDFINFCGSRINHVSELLFIRNDGMEERYSVLIKLGN 120

Query: 121 QMDADRFFGNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180
           QMDAD FFG LNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER
Sbjct: 121 QMDADGFFGRLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180

Query: 181 FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGTMENLWVCVIC 240
           FDPDTSGIIHTLCDHSFHC CISKWTSLSCQVCRFCQQQDEKQACFICGT ENLWVCVIC
Sbjct: 181 FDPDTSGIIHTLCDHSFHCPCISKWTSLSCQVCRFCQQQDEKQACFICGTTENLWVCVIC 240

Query: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDCKFGEMNSH 300
           GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVD KFGEMNSH
Sbjct: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDGKFGEMNSH 300

Query: 301 CISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360
           CISHEG CGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK
Sbjct: 301 CISHEGACGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360

Query: 361 KEVSISEAVEEALISKTQDIQDKLEKCVKEKNAVSDVNQKLIKNQEMWLAKAKQIEEREQ 420
           +EVS+SEAVEEALISKTQDI DKLE CVKEKN VSDVNQKLIKNQEMW+AKAKQIEERE 
Sbjct: 361 REVSVSEAVEEALISKTQDIHDKLENCVKEKNVVSDVNQKLIKNQEMWMAKAKQIEEREL 420

Query: 421 ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKK 480
           ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLN ITDSDDIKGGT+LPVPAKESSP +GRKK
Sbjct: 421 ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNKITDSDDIKGGTVLPVPAKESSPSSGRKK 480

Query: 481 KGSRRRN 488
           KGSRRRN
Sbjct: 481 KGSRRRN 487

[Close]

BLAST of Lsi11G003370 vs. NCBI nr
Match: XP_022999396.1 (BRCA1-associated protein [Cucurbita maxima])

HSP 1 Score: 916.0 bits (2366), Expect = 1.4e-262
Identity = 455/487 (93.43%), Postives = 469/487 (96.30%), Query Frame = 0


Query: 1   MFFLQVHSVDTDHLLNIGISPEESSTTSTISQRNSTASHAHTKFSERRGIVHLFRSISNS 60
           MFFLQVHSVDTD  L +GISPE+SSTTST+SQRNSTAS+ HTKFSERRGI+HLFRSIS+S
Sbjct: 1   MFFLQVHSVDTDQPLTVGISPEQSSTTSTVSQRNSTASYVHTKFSERRGIIHLFRSISHS 60

Query: 61  SLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGAEERYSVLIKLEN 120
           SLPNPSSQSTILFVVAVPNYLSYDDF+ FCGSRINHVSELLFIRNDG EERYSVLIKL N
Sbjct: 61  SLPNPSSQSTILFVVAVPNYLSYDDFINFCGSRINHVSELLFIRNDGMEERYSVLIKLGN 120

Query: 121 QMDADRFFGNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180
           QMDAD FFG+LNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER
Sbjct: 121 QMDADGFFGSLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCLER 180

Query: 181 FDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGTMENLWVCVIC 240
           FDPDTSGIIHTLCDHSFHC CISKWTSLSCQVCRFCQQQDEKQACFICGT+ENLWVCVIC
Sbjct: 181 FDPDTSGIIHTLCDHSFHCPCISKWTSLSCQVCRFCQQQDEKQACFICGTLENLWVCVIC 240

Query: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDCKFGEMNSH 300
           GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVD KFGEMNSH
Sbjct: 241 GFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDGKFGEMNSH 300

Query: 301 CISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360
           CISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK
Sbjct: 301 CISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAKSK 360

Query: 361 KEVSISEAVEEALISKTQDIQDKLEKCVKEKNAVSDVNQKLIKNQEMWLAKAKQIEEREQ 420
           +EVS+SEAVEEALISKTQDI DKLE CVKE N VSDVNQKLIKNQEMW+AKAKQ+EERE 
Sbjct: 361 REVSVSEAVEEALISKTQDIHDKLENCVKEINVVSDVNQKLIKNQEMWMAKAKQVEEREL 420

Query: 421 ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKK 480
           ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLN ITDSDDIKGGTLLPVPAKESSP +GR K
Sbjct: 421 ASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNKITDSDDIKGGTLLPVPAKESSPSSGR-K 480

Query: 481 KGSRRRN 488
           KGSRRRN
Sbjct: 481 KGSRRRN 486

[Close]

BLAST of Lsi11G003370 vs. TAIR 10
Match: AT2G42160.1 (zinc finger (ubiquitin-hydrolase) domain-containing protein )

HSP 1 Score: 604.7 bits (1558), Expect = 6.3e-173
Identity = 300/489 (61.35%), Postives = 382/489 (78.12%), Query Frame = 0


Query: 1   MFFLQVHSVDTDHLLNIGISPEESSTT--STISQRNSTASHAHTKFSERRGIVHLFRSIS 60
           MF L+VHSVD++    I +  EES  T  S  +Q          K ++R+G++HL+R  S
Sbjct: 1   MFILRVHSVDSER--PISVEEEESGFTYASKRAQPPLKLIQPSLKLTDRKGLIHLYRKSS 60

Query: 61  NSSLPNPSSQSTILFVVAVPNYLSYDDFVTFCGSRINHVSELLFIRNDGAEERYSVLIKL 120
           +SSLPNPSS+ST LF+VAVPNYLS  DF+ FC SRI+ VS++LFIRNDG E+RYSVLI  
Sbjct: 61  HSSLPNPSSRSTTLFIVAVPNYLSSLDFIRFCDSRISQVSDILFIRNDGMEDRYSVLITF 120

Query: 121 ENQMDADRFFGNLNGKKFSPSEAEVCHILFLMSVEYTESAEVAGSPPDGCTELPTCPVCL 180
            +Q +AD F+ NLNGKKF+PSEAEVCHIL++MSVE+TE  EVA   P G TELPTCP+CL
Sbjct: 121 SDQSEADGFYNNLNGKKFAPSEAEVCHILYVMSVEHTEFDEVAAEAPTGFTELPTCPICL 180

Query: 181 ERFDPDTSGIIHTLCDHSFHCLCISKWTSLSCQVCRFCQQQDEKQACFICGTMENLWVCV 240
           ER DPDTSGI+ TLCDHSF C C SKWT LSCQVCR CQQQDE   C ICG  EN+W C+
Sbjct: 181 ERLDPDTSGIVSTLCDHSFQCSCTSKWTYLSCQVCRLCQQQDEILNCSICGKTENVWACL 240

Query: 241 ICGFLGCGRYKEGHAIRHWKNMHHCYSLDLRTQQIWDYVGDTYVHRLNQSKVDCKFGEMN 300
           +CGF+GCGRYKEGH+IRHWK  HHCYSLDLRTQQIWDYVGD+YVHRLN SK+D K  EM+
Sbjct: 241 VCGFVGCGRYKEGHSIRHWKETHHCYSLDLRTQQIWDYVGDSYVHRLNHSKIDGKSVEMS 300

Query: 301 SHCISHEGECGTCEYDEDSGINEALYSSKVEAIVDEYNRLLATQLETQRQYYESLLAEAK 360
           + C+SH+G+CG CE  ED+GI+ A+++SKV++IV EYN LLA+QL+ QRQYYESL+ EA+
Sbjct: 301 TSCLSHQGDCGLCECSEDTGISGAIFNSKVDSIVIEYNDLLASQLKGQRQYYESLIVEAR 360

Query: 361 SKKEVSISEAVEEALISKTQDIQDKLEKCVKEKNAVSDVNQKLIKNQEMWLAKAKQIEER 420
           SK+E SI+EAVE+ +++  Q++Q+K+EKC +EK+ +++VN KLIK Q+ W  KAK+IEER
Sbjct: 361 SKQESSIAEAVEQIVVNTMQELQNKIEKCEEEKSGITEVNTKLIKEQDTWRKKAKEIEER 420

Query: 421 EQASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNI-TDSDDIKGGTLLPVPAKESSPGNG 480
           E A L S++E I DL+EQIRD+TV+IEA+KTL  + +D+D I+ GT+LPVP       + 
Sbjct: 421 EAALLGSKDEMITDLQEQIRDITVFIEAKKTLKKMSSDTDGIREGTVLPVPISPEPVSSV 480

Query: 481 RKKKGSRRR 487
           R++K S RR
Sbjct: 481 RRQKKSNRR 487

[Close]

BLAST of Lsi11G003370 vs. TAIR 10
Match: AT2G26000.2 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 418.7 bits (1075), Expect = 6.4e-117
Identity = 206/461 (44.69%), Postives = 300/461 (65.08%), Query Frame = 0


Query: 38  SHAHTKFSERRGIVHLF------RSISNSSLPNPSSQSTILFVVAVPNYLSYDDFVTFCG 97
           S  + +  E RG++HL        S S+SS   P  ++ ++ V+ VPN+++Y DF  FCG
Sbjct: 22  SSGNPRIGETRGVMHLISDNAVSSSSSSSSSNLPIGRNPLVCVLGVPNHMTYADFCQFCG 81

Query: 98  SRINHVSELLFIRNDGAEERYSVLIKLENQMDADRFFGNLNGKKFSPSEAEVCHILFLMS 157
           S I H+ ++  +RND  E RYS+LI+ ++Q   D FF +  GK+F+  + +VC +LF + 
Sbjct: 82  SFIQHILDMRTVRNDDIENRYSILIRFDSQESTDTFFQHFRGKQFNSLDEDVCRLLFALD 141

Query: 158 VEYT-ESAEVAGSPPD--GCTELPTCPVCLERFDPDTSGIIHTLCDHSFHCLCISKWTSL 217
           V++T  S  +  + P   G  E PTCPVCLER D DT GI+ T+C+HSFHC CIS W   
Sbjct: 142 VQFTGYSGSIDHTQPSAAGPIEQPTCPVCLERLDQDTGGILTTMCNHSFHCSCISNWPDS 201

Query: 218 SCQVCRFCQQQDEKQACFICGTMENLWVCVICGFLGCGRYKEGHAIRHWKNMHHCYSLDL 277
           SC VCR+CQQQ E   C +C T ENLW+CVICG +GCGRYKEGHA RHW+   HCYSL+L
Sbjct: 202 SCPVCRYCQQQPENSVCCVCQTTENLWMCVICGVVGCGRYKEGHARRHWEETEHCYSLEL 261

Query: 278 RTQQIWDYVGDTYVHRLNQSKVDCKFGEMNSHCISHEGECGTCEYDEDSGINEALYSSKV 337
            TQ++WDY GD YVHRL QSK D K  E+NSH    +  CG+CEY  DSG+ +AL +SKV
Sbjct: 262 ETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHGSLSKDGCGSCEY-SDSGMTDALLNSKV 321

Query: 338 EAIVDEYNRLLATQLETQRQYYESLLAEAKSKKEVSISEAVEEALISKTQDIQDKLEKCV 397
           + I+ EYN LL  QLE Q+QY+E LL   K + E  ISEA  +A+  + Q +Q + ++CV
Sbjct: 322 DMIISEYNELLQAQLENQKQYFEKLLQNVKEETEQKISEAASKAISQRLQKLQTRFDRCV 381

Query: 398 KEKNAVSDVNQKLIKNQEMWLAKAKQIEEREQASLKSRNEKIHDLEEQIRDLTVYIEAQK 457
           KEK  + D+N+ L+KN+++W  K  +++ERE+ ++++++EKI  LEEQ+ +L   ++ + 
Sbjct: 382 KEKQFLEDLNENLVKNKDVWSTKITEMKEREKKAVRAKDEKIQGLEEQLGNLMAQMDGE- 441

Query: 458 TLNNITDSDDIKGGTLLPVPAKESSPGN---GRKKKGSRRR 487
             + ++++ +++  T+       S  GN     KKK +RR+
Sbjct: 442 --SEVSETKEVQDATVSTTNTSSSGAGNVIHANKKKSNRRK 478

[Close]

BLAST of Lsi11G003370 vs. TAIR 10
Match: AT2G26000.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 386.7 bits (992), Expect = 2.7e-107
Identity = 195/461 (42.30%), Postives = 287/461 (62.26%), Query Frame = 0


Query: 38  SHAHTKFSERRGIVHLF------RSISNSSLPNPSSQSTILFVVAVPNYLSYDDFVTFCG 97
           S  + +  E RG++HL        S S+SS   P  ++ ++ V+ VPN+++Y DF  FCG
Sbjct: 22  SSGNPRIGETRGVMHLISDNAVSSSSSSSSSNLPIGRNPLVCVLGVPNHMTYADFCQFCG 81

Query: 98  SRINHVSELLFIRNDGAEERYSVLIKLENQMDADRFFGNLNGKKFSPSEAEVCHILFLMS 157
           S I H+ ++  +RND  E RYS+LI+ ++Q   D FF +  GK+F+  + +VC +LF + 
Sbjct: 82  SFIQHILDMRTVRNDDIENRYSILIRFDSQESTDTFFQHFRGKQFNSLDEDVCRLLFALD 141

Query: 158 VEYT-ESAEVAGSPPD--GCTELPTCPVCLERFDPDTSGIIHTLCDHSFHCLCISKWTSL 217
           V++T  S  +  + P   G  E PTCPVCLER D DT GI+ T+C+HSFHC CIS W   
Sbjct: 142 VQFTGYSGSIDHTQPSAAGPIEQPTCPVCLERLDQDTGGILTTMCNHSFHCSCISNWPDS 201

Query: 218 SCQVCRFCQQQDEKQACFICGTMENLWVCVICGFLGCGRYKEGHAIRHWKNMHHCYSLDL 277
           SC VCR+CQQQ E   C +C T ENLW+CVICG +GCGRYKEGHA RHW+   HCYSL+L
Sbjct: 202 SCPVCRYCQQQPENSVCCVCQTTENLWMCVICGVVGCGRYKEGHARRHWEETEHCYSLEL 261

Query: 278 RTQQIWDYVGDTYVHRLNQSKVDCKFGEMNSHCISHEGECGTCEYDEDSGINEALYSSKV 337
            TQ++WDY GD YVHRL QSK D K  E+NSH    +  CG+CEY  DSG+ +AL +SKV
Sbjct: 262 ETQRVWDYAGDNYVHRLIQSKTDGKLVELNSHGSLSKDGCGSCEY-SDSGMTDALLNSKV 321

Query: 338 EAIVDEYNRLLATQLETQRQYYESLLAEAKSKKEVSISEAVEEALISKTQDIQDKLEKCV 397
           +                   Y+E LL   K + E  ISEA  +A+  + Q +Q + ++CV
Sbjct: 322 D------------------MYFEKLLQNVKEETEQKISEAASKAISQRLQKLQTRFDRCV 381

Query: 398 KEKNAVSDVNQKLIKNQEMWLAKAKQIEEREQASLKSRNEKIHDLEEQIRDLTVYIEAQK 457
           KEK  + D+N+ L+KN+++W  K  +++ERE+ ++++++EKI  LEEQ+ +L   ++ + 
Sbjct: 382 KEKQFLEDLNENLVKNKDVWSTKITEMKEREKKAVRAKDEKIQGLEEQLGNLMAQMDGE- 441

Query: 458 TLNNITDSDDIKGGTLLPVPAKESSPGN---GRKKKGSRRR 487
             + ++++ +++  T+       S  GN     KKK +RR+
Sbjct: 442 --SEVSETKEVQDATVSTTNTSSSGAGNVIHANKKKSNRRK 460

[Close]

BLAST of Lsi11G003370 vs. TAIR 10
Match: AT1G72220.1 (RING/U-box superfamily protein )

HSP 1 Score: 48.1 bits (113), Expect = 2.3e-05
Identity = 22/51 (43.14%), Postives = 28/51 (54.90%), Query Frame = 0


Query: 166 DGCTELPTCPVCLERFDPDTSGIIHTLCDHSFHCLCISKWTS--LSCQVCR 215
           DG  E   CPVCL  F+ D S  +   C+H+FH  CI  W S   +C +CR
Sbjct: 169 DGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCR 219

The following BLAST results are available for this feature:

BLAST of Lsi11G003370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
E5KGE0	8.9e-172	61.35	BRAP2 RING ZnF UBP domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 G...	[more]
O80996	9.0e-116	44.69	BRAP2 RING ZnF UBP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q7Z569	5.4e-68	33.33	BRCA1-associated protein OS=Homo sapiens OX=9606 GN=BRAP PE=1 SV=2	[more]
Q99MP8	1.5e-65	32.27	BRCA1-associated protein OS=Mus musculus OX=10090 GN=Brap PE=1 SV=1	[more]
P38748	1.5e-57	30.92	RING finger protein ETP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c...	[more]

BLAST of Lsi11G003370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BF17	1.3e-266	94.05	BRCA1-associated protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3C5L6	1.3e-266	94.05	BRCA1-associated protein OS=Cucumis melo OX=3656 GN=LOC103496733 PE=4 SV=1	[more]
A0A0A0LIZ8	4.6e-264	93.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G007410 PE=4 SV=1	[more]
A0A6J1KCX7	6.7e-263	93.43	BRCA1-associated protein OS=Cucurbita maxima OX=3661 GN=LOC111493779 PE=4 SV=1	[more]
A0A6J1G3B0	3.3e-262	93.02	BRCA1-associated protein OS=Cucurbita moschata OX=3662 GN=LOC111450386 PE=4 SV=1	[more]

BLAST of Lsi11G003370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889999.1	1.7e-268	95.48	BRAP2 RING ZnF UBP domain-containing protein 1 [Benincasa hispida]	[more]
XP_008456935.1	2.7e-266	94.05	PREDICTED: BRCA1-associated protein [Cucumis melo] >KAA0063536.1 BRCA1-associate...	[more]
XP_004139299.1	9.5e-264	93.43	BRAP2 RING ZnF UBP domain-containing protein 1 [Cucumis sativus] >KGN60697.1 hyp...	[more]
XP_023547244.1	2.1e-263	93.43	BRCA1-associated protein [Cucurbita pepo subsp. pepo]	[more]
XP_022999396.1	1.4e-262	93.43	BRCA1-associated protein [Cucurbita maxima]	[more]

BLAST of Lsi11G003370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42160.1	6.3e-173	61.35	zinc finger (ubiquitin-hydrolase) domain-containing protein	[more]
AT2G26000.2	6.4e-117	44.69	zinc finger (C3HC4-type RING finger) family protein	[more]
AT2G26000.1	2.7e-107	42.30	zinc finger (C3HC4-type RING finger) family protein	[more]
AT1G72220.1	2.3e-05	43.14	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 416..436
None	No IPR available	COILS	Coil	Coil	coord: 340..360
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 455..487
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..39
None	No IPR available	PANTHER	PTHR24007	BRCA1-ASSOCIATED PROTEIN	coord: 1..487
None	No IPR available	CDD	cd16457	RING-H2_BRAP2	coord: 172..215 e-value: 1.80617E-19 score: 79.632
None	No IPR available	CDD	cd12437	RRM_BRAP2_like	coord: 72..153 e-value: 4.90166E-31 score: 112.765
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 191..290
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 174..213 e-value: 6.2E-4 score: 29.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 174..214 score: 11.279532
IPR001607	Zinc finger, UBP-type	SMART	SM00290	Zf_UBP_1	coord: 224..273 e-value: 5.8E-20 score: 82.3
IPR001607	Zinc finger, UBP-type	PFAM	PF02148	zf-UBP	coord: 210..284 e-value: 2.8E-14 score: 53.2
IPR001607	Zinc finger, UBP-type	PROSITE	PS50271	ZF_UBP	coord: 223..284 score: 17.975332
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 189..302 e-value: 1.1E-19 score: 72.4
IPR011422	BRCA1-associated 2	PFAM	PF07576	BRAP2	coord: 64..160 e-value: 2.3E-33 score: 114.4
IPR033273	RING domain containing protein BRIZ1/BRIZ2	PANTHER	PTHR24007:SF10	BRAP2 RING ZNF UBP DOMAIN-CONTAINING PROTEIN 1	coord: 1..487

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G003370.1	Lsi11G003370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0010029	regulation of seed germination
cellular_component	GO:0000151	ubiquitin ligase complex
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding