Lsi11G003360 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G003360
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	actin-related protein 6
Location	chr11: 3465407 .. 3467113 (-)
RNA-Seq Expression	Lsi11G003360
Synteny	Lsi11G003360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACAATGCACCGGAGAGGAGCTAGCTACAGCTACCTGTCTCAGACTCTCAACCGTCAGAAAGAGCTCAAACTGCGTTCTCAATGTCGAACGTCGTCGTTTTGGACAACGGCGGTGGTCTCCTCAAAGCCGGAATCGGCGGCGACCTTGATCCCTCCGTCATAATCCCCAACTGCCTCTACCGCCCTCTCTCCGCCAAGAAATGGCTCCACCCTTCTCCAATCTCCATTTCCACCACCGCCGCCGCCGCTGCCCCCGAAGCCCCCTCCGATCTCGACCTCACATCTGCCTCCGTCCGCCGCCCTATTGACCGAGGGTATCTCATAAACCCCGACCTGCAGCGCGACATTTGGTCTAACCTCTTCACCTCTCTTCTTCACGTCAATCCCTCCAATTCCTCCCTCCTCTTGACGGAACCTCTCTTCACTCTCCCTTCAATTCAAGGCGCCACTGACGAACTCGTTTTCGAGGATTTCAATTTTGCTTCTCTCTATGTTTCGGATTCTCCATCTTTAGTTCACTTCTATGAGGCCAGCCGCCGTCCGACGAGCCTTCTATCTAGGGCACAATGTAGCCTTGTTGTTGACTGTGGGTTTTCTTTCACTCATGCTGCTCCAGTGTTCCAGAACTTCACTCTGAACTACGCTGTCAAAAGGATCGACCTGGGAGGGAAGGCATTGACGAATTATTTGAAGGAGTTAGTGTCATATCGTGCTTTGAATGTTATGGATGAGACCTTCATCATGGATGATGTCAAAGAGAAACTCTGCTTTGTCTCCCTCAACGTCCCCCGCGACCTCCAGATTGCGAGGTTTGCACCCATTTTCTTCTAGGGCATGGGTTTGGAGTTATCTAATGATTTCCTAGATGAATTTTGTTGGGGTTGTTTGAAATTCCTTATTATTATTATTATTATTATTATTTTTTGTTGTTGTTATTTTTAAGACTGTTTGTTTCTTGGGAAAATGTTGGTGAATTGATGTTAGAATACCATTTTTTCAGGTTATGATGCTAGTTATCTGGCTTCTGAATTTTGATTATCCCATTGAAGTTTCTGTACAGTTTATTTTCTGTGTGTTTGAAGATTTATAGTGAGATTGTTTTAGGCTGTTAGTCCTTTTCTTATCTTAGAATGTTGGGTTTCCTGGTAAATATGGATAGTGAAGTTCTTCAGGATTGAAGGCCTTTTGGCTTCTAGCTTTGCTGCCCCATAGAGTGGTTTTGCTTAGATTTTTAGTAGTTTGGCTCTTTAAGTACTTCTGGCTTTGTTTATGCATCACTCTTGAACAAAAGCTATAACCCTGTCATGGATTTTTGTGTAGGAAACCGGGAAAGGAAAATCTCTTCCGATGCACATATGTGCTCCCTGATGGCATTTCGTATACAAGGGGTTTTGTTAAAAATCCAGATGAAGCTAAGAGGTTTCTCTCCTTGACTGATGAAGCCTCATCTCCATCTCTTGGAGTCAAGAAGGACGTGATTGAGCTAGATGTATCAGAAAAGTCTGAAAAGACGGAAGACAGGAAGAGAATTGATCTAACAAAAAATGTAAATTCTCATTTTTGTGAATCAATTTCAAGCTTCCCTTGTTTGTTAAATTCAATCTTCATGCTTTTTCCAGGAATTTGATTTGACAAATGAACGCTTCCTTGTTCCAGAAATGATATTCCATCCCGCAGATTTGGGTAGGTACCATATTCTTATATGA

mRNA sequence

CAACAATGCACCGGAGAGGAGCTAGCTACAGCTACCTGTCTCAGACTCTCAACCGTCAGAAAGAGCTCAAACTGCGTTCTCAATGTCGAACGTCGTCGTTTTGGACAACGGCGGTGGTCTCCTCAAAGCCGGAATCGGCGGCGACCTTGATCCCTCCGTCATAATCCCCAACTGCCTCTACCGCCCTCTCTCCGCCAAGAAATGGCTCCACCCTTCTCCAATCTCCATTTCCACCACCGCCGCCGCCGCTGCCCCCGAAGCCCCCTCCGATCTCGACCTCACATCTGCCTCCGTCCGCCGCCCTATTGACCGAGGGTATCTCATAAACCCCGACCTGCAGCGCGACATTTGGTCTAACCTCTTCACCTCTCTTCTTCACGTCAATCCCTCCAATTCCTCCCTCCTCTTGACGGAACCTCTCTTCACTCTCCCTTCAATTCAAGGCGCCACTGACGAACTCGTTTTCGAGGATTTCAATTTTGCTTCTCTCTATGTTTCGGATTCTCCATCTTTAGTTCACTTCTATGAGGCCAGCCGCCGTCCGACGAGCCTTCTATCTAGGGCACAATGTAGCCTTGTTGTTGACTGTGGGTTTTCTTTCACTCATGCTGCTCCAGTGTTCCAGAACTTCACTCTGAACTACGCTGTCAAAAGGATCGACCTGGGAGGGAAGGCATTGACGAATTATTTGAAGGAGTTAGTGTCATATCGTGCTTTGAATGTTATGGATGAGACCTTCATCATGGATGATGTCAAAGAGAAACTCTGCTTTGTCTCCCTCAACGTCCCCCGCGACCTCCAGATTGCGAGGAAACCGGGAAAGGAAAATCTCTTCCGATGCACATATGTGCTCCCTGATGGCATTTCGTATACAAGGGGTTTTGTTAAAAATCCAGATGAAGCTAAGAGGTTTCTCTCCTTGACTGATGAAGCCTCATCTCCATCTCTTGGAGTCAAGAAGGACGTGATTGAGCTAGATGTATCAGAAAAGTCTGAAAAGACGGAAGACAGGAAGAGAATTGATCTAACAAAAAATGAATTTGATTTGACAAATGAACGCTTCCTTGTTCCAGAAATGATATTCCATCCCGCAGATTTGGGTAGGTACCATATTCTTATATGA

Coding sequence (CDS)

ATGTCGAACGTCGTCGTTTTGGACAACGGCGGTGGTCTCCTCAAAGCCGGAATCGGCGGCGACCTTGATCCCTCCGTCATAATCCCCAACTGCCTCTACCGCCCTCTCTCCGCCAAGAAATGGCTCCACCCTTCTCCAATCTCCATTTCCACCACCGCCGCCGCCGCTGCCCCCGAAGCCCCCTCCGATCTCGACCTCACATCTGCCTCCGTCCGCCGCCCTATTGACCGAGGGTATCTCATAAACCCCGACCTGCAGCGCGACATTTGGTCTAACCTCTTCACCTCTCTTCTTCACGTCAATCCCTCCAATTCCTCCCTCCTCTTGACGGAACCTCTCTTCACTCTCCCTTCAATTCAAGGCGCCACTGACGAACTCGTTTTCGAGGATTTCAATTTTGCTTCTCTCTATGTTTCGGATTCTCCATCTTTAGTTCACTTCTATGAGGCCAGCCGCCGTCCGACGAGCCTTCTATCTAGGGCACAATGTAGCCTTGTTGTTGACTGTGGGTTTTCTTTCACTCATGCTGCTCCAGTGTTCCAGAACTTCACTCTGAACTACGCTGTCAAAAGGATCGACCTGGGAGGGAAGGCATTGACGAATTATTTGAAGGAGTTAGTGTCATATCGTGCTTTGAATGTTATGGATGAGACCTTCATCATGGATGATGTCAAAGAGAAACTCTGCTTTGTCTCCCTCAACGTCCCCCGCGACCTCCAGATTGCGAGGAAACCGGGAAAGGAAAATCTCTTCCGATGCACATATGTGCTCCCTGATGGCATTTCGTATACAAGGGGTTTTGTTAAAAATCCAGATGAAGCTAAGAGGTTTCTCTCCTTGACTGATGAAGCCTCATCTCCATCTCTTGGAGTCAAGAAGGACGTGATTGAGCTAGATGTATCAGAAAAGTCTGAAAAGACGGAAGACAGGAAGAGAATTGATCTAACAAAAAATGAATTTGATTTGACAAATGAACGCTTCCTTGTTCCAGAAATGATATTCCATCCCGCAGATTTGGGTAGGTACCATATTCTTATATGA

Protein sequence

MSNVVVLDNGGGLLKAGIGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTAAAAAPEAPSDLDLTSASVRRPIDRGYLINPDLQRDIWSNLFTSLLHVNPSNSSLLLTEPLFTLPSIQGATDELVFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVFQNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDLQIARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRFLSLTDEASSPSLGVKKDVIELDVSEKSEKTEDRKRIDLTKNEFDLTNERFLVPEMIFHPADLGRYHILI

Homology

[Close]

BLAST of Lsi11G003360 vs. ExPASy Swiss-Prot
Match: Q8LGE3 (Actin-related protein 6 OS=Arabidopsis thaliana OX=3702 GN=ARP6 PE=1 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 2.3e-121
Identity = 218/340 (64.12%), Postives = 271/340 (79.71%), Query Frame = 0


Query: 1   MSNVVVLDNGGGLLKAGIGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTAAAAAPEA 60
           MSN+VVLDNGGGL+KAG GG+ DP+ +IPNCLY+PLS+KK++HPSP+   TT +      
Sbjct: 1   MSNIVVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPL---TTLS------ 60

Query: 61  PSDLDLTSASVRRPIDRGYLINPDLQRDIWSNLFTSLLHVNPSNSSLLLTEPLFTLPSIQ 120
             ++DLTSA+VRRPIDRGYLIN DLQR+IWS+LFTSLLH+ PS+SSLLLTE   ++PS+Q
Sbjct: 61  -DEIDLTSAAVRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQ 120

Query: 121 GATDELVFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVF 180
             TDELVFEDF F+SLY++   SLVH YEASR+P S+LS+ QCSLVVDCGFSFTHA PV 
Sbjct: 121 RTTDELVFEDFGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVL 180

Query: 181 QNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDLQ 240
            NFTLN+A+KRIDLGGKA TNYLKELVSYR++NVMDETF++DD KEKLCFVSL++ RDL+
Sbjct: 181 HNFTLNHAIKRIDLGGKAFTNYLKELVSYRSINVMDETFLVDDAKEKLCFVSLDLLRDLR 240

Query: 241 IARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRFLSLTDEASSPSLGVKKDVIELDV 300
           +AR      L + TYVLPDG+++T+G+VK+P  AKRFLSL++         K+ V+ +D 
Sbjct: 241 LAR--NGNTLIKSTYVLPDGVTHTKGYVKDPQAAKRFLSLSE---------KESVVVMD- 300

Query: 301 SEKSEKTEDRKRIDLTKNEFDLTNERFLVPEMIFHPADLG 341
                K  +RK+ D+ KNE DLTNERFLVPE +F PADLG
Sbjct: 301 -----KVGERKKADMNKNEIDLTNERFLVPETLFQPADLG 313

[Close]

BLAST of Lsi11G003360 vs. ExPASy Swiss-Prot
Match: A2WNB0 (Actin-related protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=ARP6 PE=3 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 2.3e-113
Identity = 207/339 (61.06%), Postives = 259/339 (76.40%), Query Frame = 0


Query: 2   SNVVVLDNGGGLLKAGIGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTAAAAAPEAP 61
           S VVVLDNGGGLLKAG GGD++P+ ++PNC+ +P  +KKWL             A     
Sbjct: 5   SGVVVLDNGGGLLKAGFGGDMNPTAVVPNCMAKPPGSKKWL------------VADQLQA 64

Query: 62  SDLDLTSASVRRPIDRGYLINPDLQRDIWSNLFTSLLHVNPSNSSLLLTEPLFTLPSIQG 121
            D+D+T  ++RRPIDRGYLIN ++QR++W  +  +LL V+P+NSSLLL EP F  P++Q 
Sbjct: 65  QDVDVTGMTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQH 124

Query: 122 ATDELVFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVFQ 181
           ATDELVFE+  F SL V+D+PSLVH YEASR+P+  L RAQCSLVVDCGFSFTHA+PV Q
Sbjct: 125 ATDELVFEELGFKSLCVADAPSLVHLYEASRQPS--LFRAQCSLVVDCGFSFTHASPVLQ 184

Query: 182 NFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDLQI 241
           NFTLNYAV+R+DLGGKALTNYLKEL+SYR+LNVMDET ++DD KEKLCFVSL+VP DL++
Sbjct: 185 NFTLNYAVRRMDLGGKALTNYLKELISYRSLNVMDETLLIDDAKEKLCFVSLDVPGDLRL 244

Query: 242 ARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRFLSLTDEASSPSLGVKKDVIELDVS 301
           AR    +N FRC+Y+LPDGI+Y +GFVK+ DEA R+ SL     S    V+KD  + D S
Sbjct: 245 ARLSSNDNPFRCSYILPDGITYKKGFVKDLDEACRYSSLPANGES----VRKDSSDSDRS 304

Query: 302 EKSEKTEDRKRIDLTKNEFDLTNERFLVPEMIFHPADLG 341
               K ED+K+ +L++NEF LTNERFLVPEM+FHP DLG
Sbjct: 305 ----KFEDKKKPELSQNEFVLTNERFLVPEMLFHPIDLG 321

[Close]

BLAST of Lsi11G003360 vs. ExPASy Swiss-Prot
Match: Q5NBI2 (Actin-related protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ARP6 PE=2 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 2.3e-113
Identity = 207/339 (61.06%), Postives = 259/339 (76.40%), Query Frame = 0


Query: 2   SNVVVLDNGGGLLKAGIGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTAAAAAPEAP 61
           S VVVLDNGGGLLKAG GGD++P+ ++PNC+ +P  +KKWL             A     
Sbjct: 5   SGVVVLDNGGGLLKAGFGGDMNPTAVVPNCMAKPPGSKKWL------------VADQLQA 64

Query: 62  SDLDLTSASVRRPIDRGYLINPDLQRDIWSNLFTSLLHVNPSNSSLLLTEPLFTLPSIQG 121
            D+D+T  ++RRPIDRGYLIN ++QR++W  +  +LL V+P+NSSLLL EP F  P++Q 
Sbjct: 65  QDVDVTGMTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQH 124

Query: 122 ATDELVFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVFQ 181
           ATDELVFE+  F SL V+D+PSLVH YEASR+P+  L RAQCSLVVDCGFSFTHA+PV Q
Sbjct: 125 ATDELVFEELGFKSLCVADAPSLVHLYEASRQPS--LFRAQCSLVVDCGFSFTHASPVLQ 184

Query: 182 NFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDLQI 241
           NFTLNYAV+R+DLGGKALTNYLKEL+SYR+LNVMDET ++DD KEKLCFVSL+VP DL++
Sbjct: 185 NFTLNYAVRRMDLGGKALTNYLKELISYRSLNVMDETLLIDDAKEKLCFVSLDVPGDLRL 244

Query: 242 ARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRFLSLTDEASSPSLGVKKDVIELDVS 301
           AR    +N FRC+Y+LPDGI+Y +GFVK+ DEA R+ SL     S    V+KD  + D S
Sbjct: 245 ARLSSNDNPFRCSYILPDGITYKKGFVKDLDEACRYSSLPANGES----VRKDSSDSDRS 304

Query: 302 EKSEKTEDRKRIDLTKNEFDLTNERFLVPEMIFHPADLG 341
               K ED+K+ +L++NEF LTNERFLVPEM+FHP DLG
Sbjct: 305 ----KFEDKKKPELSQNEFVLTNERFLVPEMLFHPIDLG 321

[Close]

BLAST of Lsi11G003360 vs. ExPASy Swiss-Prot
Match: P0CM05 (Actin-like protein ARP6 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=ARP6 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 8.6e-44
Identity = 115/342 (33.63%), Postives = 183/342 (53.51%), Query Frame = 0


Query: 4   VVVLDNGGGLLKAGIGG-DLDPSVIIPNCLYRPLSAKKWLHPSPISISTTAAAAAPEAPS 63
           V+++DNG   +KAGI G D +P V +PN + R  + K+                  E  +
Sbjct: 6   VLIIDNGAYEIKAGISGVDWEPRV-LPNSIARSRTEKR-------------VYVGDEIDN 65

Query: 64  DLDLTSASVRRPIDRGYLINPDLQRDIWSNLFT-SLLHVNPSNSSLLLTEPLFTLPSIQG 123
             DL+    RRP ++G L+N D +R IW  LF+ S+L++NP+ +SLL+TEP F LP+I  
Sbjct: 66  CKDLSGIVYRRPFEKGMLVNWDAERIIWDRLFSPSVLNINPTETSLLVTEPYFNLPNIAE 125

Query: 124 ATDELVFEDFNFASLYVSDSPSLVHF---YEASRRPTSLLSRAQCSLVVDCGFSFTHAAP 183
             D+++FE+F F S +     +L+ +   YE+ +         QC++V+D G+S+TH  P
Sbjct: 126 TYDQMIFEEFEFQSYFRCAPAALIPYGGLYESDQG-----IPPQCTIVIDMGYSYTHVVP 185

Query: 184 VFQNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRD 243
           +     +   VKRID+GGK LTN+LK L+S+R  N++D+T +++ V+E   +VSLN   D
Sbjct: 186 IRDGQIVWEHVKRIDVGGKLLTNHLKHLISFRQWNMIDQTHVVNSVREACGYVSLNWKGD 245

Query: 244 LQIARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRFLSLTDEASSPSLGVKKDVIEL 303
           L+  +   ++N     YVLPD       F  N      ++     A+ P         E+
Sbjct: 246 LETCKAKPRKNPIIQEYVLPD-------FSANSTSRTGYIRSGPNAAPPE--ETNGTGEV 305

Query: 304 DVSEKSEKTEDRKRIDLTKNEFDLTNERFLVPEMIFHPADLG 341
           +  +K E+ E             + NERF  PE++FHP+D+G
Sbjct: 306 NGKQKPEEEE---------QVLWMGNERFAGPELLFHPSDIG 310

[Close]

BLAST of Lsi11G003360 vs. ExPASy Swiss-Prot
Match: P0CM04 (Actin-like protein ARP6 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=ARP6 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 8.6e-44
Identity = 115/342 (33.63%), Postives = 183/342 (53.51%), Query Frame = 0


Query: 4   VVVLDNGGGLLKAGIGG-DLDPSVIIPNCLYRPLSAKKWLHPSPISISTTAAAAAPEAPS 63
           V+++DNG   +KAGI G D +P V +PN + R  + K+                  E  +
Sbjct: 6   VLIIDNGAYEIKAGISGVDWEPRV-LPNSIARSRTEKR-------------VYVGDEIDN 65

Query: 64  DLDLTSASVRRPIDRGYLINPDLQRDIWSNLFT-SLLHVNPSNSSLLLTEPLFTLPSIQG 123
             DL+    RRP ++G L+N D +R IW  LF+ S+L++NP+ +SLL+TEP F LP+I  
Sbjct: 66  CKDLSGIVYRRPFEKGMLVNWDAERIIWDRLFSPSVLNINPTETSLLVTEPYFNLPNIAE 125

Query: 124 ATDELVFEDFNFASLYVSDSPSLVHF---YEASRRPTSLLSRAQCSLVVDCGFSFTHAAP 183
             D+++FE+F F S +     +L+ +   YE+ +         QC++V+D G+S+TH  P
Sbjct: 126 TYDQMIFEEFEFQSYFRCAPAALIPYGGLYESDQG-----IPPQCTIVIDMGYSYTHVVP 185

Query: 184 VFQNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRD 243
           +     +   VKRID+GGK LTN+LK L+S+R  N++D+T +++ V+E   +VSLN   D
Sbjct: 186 IRDGQIVWEHVKRIDVGGKLLTNHLKHLISFRQWNMIDQTHVVNSVREACGYVSLNWKGD 245

Query: 244 LQIARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRFLSLTDEASSPSLGVKKDVIEL 303
           L+  +   ++N     YVLPD       F  N      ++     A+ P         E+
Sbjct: 246 LETCKAKPRKNPIIQEYVLPD-------FSANSTSRTGYIRSGPNAAPPE--ETNGTGEV 305

Query: 304 DVSEKSEKTEDRKRIDLTKNEFDLTNERFLVPEMIFHPADLG 341
           +  +K E+ E             + NERF  PE++FHP+D+G
Sbjct: 306 NGKQKPEEEE---------QVLWMGNERFAGPELLFHPSDIG 310

[Close]

BLAST of Lsi11G003360 vs. ExPASy TrEMBL
Match: A0A6J1KEJ1 (actin-related protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111493625 PE=3 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 8.0e-178
Identity = 320/342 (93.57%), Postives = 330/342 (96.49%), Query Frame = 0


Query: 1   MSNVVVLDNGGGLLKAGIGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTT--AAAAAP 60
           MSNVVVLDNGGGL+KAG GGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTT   A AA 
Sbjct: 1   MSNVVVLDNGGGLIKAGFGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTTATATAAA 60

Query: 61  EAPSDLDLTSASVRRPIDRGYLINPDLQRDIWSNLFTSLLHVNPSNSSLLLTEPLFTLPS 120
           EA SDLDLTSASVRRPIDRGYLINPDLQRDIWS+LFTSLLHV+PSNSSLLLTEPLFTLPS
Sbjct: 61  EASSDLDLTSASVRRPIDRGYLINPDLQRDIWSHLFTSLLHVSPSNSSLLLTEPLFTLPS 120

Query: 121 IQGATDELVFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAP 180
           IQ ATDEL+FEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAP
Sbjct: 121 IQRATDELIFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAP 180

Query: 181 VFQNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRD 240
           VFQNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFI+DDVKEKLCFVSLNVPRD
Sbjct: 181 VFQNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIIDDVKEKLCFVSLNVPRD 240

Query: 241 LQIARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRFLSLTDEASSPSLGVKKDVIEL 300
           LQIARKPGK+NLFRCTYVLPDGISYTRGFVKNPDEAKR+LSLTDEASSPSLGVK DVIEL
Sbjct: 241 LQIARKPGKDNLFRCTYVLPDGISYTRGFVKNPDEAKRYLSLTDEASSPSLGVKNDVIEL 300

Query: 301 DVSEKSEKTEDRKRIDLTKNEFDLTNERFLVPEMIFHPADLG 341
           DV   SEKTE+RK+IDLTKNEFDLTNERFLVPEMIFHP+DLG
Sbjct: 301 DV---SEKTENRKKIDLTKNEFDLTNERFLVPEMIFHPSDLG 339

[Close]

BLAST of Lsi11G003360 vs. ExPASy TrEMBL
Match: A0A1S4DYD3 (actin-related protein 6 OS=Cucumis melo OX=3656 GN=LOC103496716 PE=3 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 2.3e-177
Identity = 322/341 (94.43%), Postives = 329/341 (96.48%), Query Frame = 0


Query: 1   MSNVVVLDNGGGLLKAGIGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTAAAAAPEA 60
           MSNVVVLDNGGGLLKAG+GGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTA AA  E 
Sbjct: 1   MSNVVVLDNGGGLLKAGVGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTATAAT-EP 60

Query: 61  PSDLDLTSASVRRPIDRGYLINPDLQRDIWSNLFTSLLHVNPSNSSLLLTEPLFTLPSIQ 120
            SDLDLTSASVRRPIDRGYLINPDLQRDIWS+LF+SLLHVNPSNSSLLLTEPLFTLPSIQ
Sbjct: 61  LSDLDLTSASVRRPIDRGYLINPDLQRDIWSHLFSSLLHVNPSNSSLLLTEPLFTLPSIQ 120

Query: 121 GATDELVFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVF 180
            ATDELVFEDFNF+SLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVF
Sbjct: 121 RATDELVFEDFNFSSLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVF 180

Query: 181 QNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDLQ 240
           QNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDLQ
Sbjct: 181 QNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDLQ 240

Query: 241 IARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRFLSLTDE-ASSPSLGVKKDVIELD 300
           IARKPGK+N FRCTYVLPDGISYTRGFVKNPDEAKR+LSLTDE ASSPSLGVKKD IELD
Sbjct: 241 IARKPGKDNFFRCTYVLPDGISYTRGFVKNPDEAKRYLSLTDEKASSPSLGVKKDAIELD 300

Query: 301 VSEKSEKTEDRKRIDLTKNEFDLTNERFLVPEMIFHPADLG 341
           V   SEKTED+KRIDLTKNEFDLTNERFLVPEMIFHPADLG
Sbjct: 301 V---SEKTEDKKRIDLTKNEFDLTNERFLVPEMIFHPADLG 337

[Close]

BLAST of Lsi11G003360 vs. ExPASy TrEMBL
Match: A0A5A7V987 (Actin-related protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G00420 PE=3 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 2.3e-177
Identity = 322/341 (94.43%), Postives = 329/341 (96.48%), Query Frame = 0


Query: 1   MSNVVVLDNGGGLLKAGIGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTAAAAAPEA 60
           MSNVVVLDNGGGLLKAG+GGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTA AA  E 
Sbjct: 1   MSNVVVLDNGGGLLKAGVGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTATAAT-EP 60

Query: 61  PSDLDLTSASVRRPIDRGYLINPDLQRDIWSNLFTSLLHVNPSNSSLLLTEPLFTLPSIQ 120
            SDLDLTSASVRRPIDRGYLINPDLQRDIWS+LF+SLLHVNPSNSSLLLTEPLFTLPSIQ
Sbjct: 61  LSDLDLTSASVRRPIDRGYLINPDLQRDIWSHLFSSLLHVNPSNSSLLLTEPLFTLPSIQ 120

Query: 121 GATDELVFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVF 180
            ATDELVFEDFNF+SLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVF
Sbjct: 121 RATDELVFEDFNFSSLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVF 180

Query: 181 QNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDLQ 240
           QNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDLQ
Sbjct: 181 QNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDLQ 240

Query: 241 IARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRFLSLTDE-ASSPSLGVKKDVIELD 300
           IARKPGK+N FRCTYVLPDGISYTRGFVKNPDEAKR+LSLTDE ASSPSLGVKKD IELD
Sbjct: 241 IARKPGKDNFFRCTYVLPDGISYTRGFVKNPDEAKRYLSLTDEKASSPSLGVKKDAIELD 300

Query: 301 VSEKSEKTEDRKRIDLTKNEFDLTNERFLVPEMIFHPADLG 341
           V   SEKTED+KRIDLTKNEFDLTNERFLVPEMIFHPADLG
Sbjct: 301 V---SEKTEDKKRIDLTKNEFDLTNERFLVPEMIFHPADLG 337

[Close]

BLAST of Lsi11G003360 vs. ExPASy TrEMBL
Match: A0A6J1G488 (actin-related protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111450644 PE=3 SV=1)

HSP 1 Score: 628.6 bits (1620), Expect = 1.5e-176
Identity = 318/341 (93.26%), Postives = 328/341 (96.19%), Query Frame = 0


Query: 1   MSNVVVLDNGGGLLKAGIGGDLDPSVIIPNCLYRPLSAKKWLHPSPISIS-TTAAAAAPE 60
           MSNVVVLDNGGGL+KAG GGD DPSVIIPNCLYRPLSAKKWLHPSPISIS TTA AAA E
Sbjct: 1   MSNVVVLDNGGGLIKAGFGGDFDPSVIIPNCLYRPLSAKKWLHPSPISISTTTATAAAAE 60

Query: 61  APSDLDLTSASVRRPIDRGYLINPDLQRDIWSNLFTSLLHVNPSNSSLLLTEPLFTLPSI 120
           A SDLDLTSASVRRPIDRGYLINPDLQRDIWS+LFTSLLHV+PSNSSLLLTEPLFTLPSI
Sbjct: 61  ASSDLDLTSASVRRPIDRGYLINPDLQRDIWSHLFTSLLHVSPSNSSLLLTEPLFTLPSI 120

Query: 121 QGATDELVFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPV 180
           Q ATDEL+FEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPV
Sbjct: 121 QRATDELIFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPV 180

Query: 181 FQNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDL 240
           FQNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFI+DDVKEKLCFVSLNVPRDL
Sbjct: 181 FQNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIIDDVKEKLCFVSLNVPRDL 240

Query: 241 QIARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRFLSLTDEASSPSLGVKKDVIELD 300
           QIARKPGKENLFRCTYVLPDGISY RGFVKNPDEAKR+LSLT+EASSPSLGVK D IELD
Sbjct: 241 QIARKPGKENLFRCTYVLPDGISYARGFVKNPDEAKRYLSLTEEASSPSLGVKNDEIELD 300

Query: 301 VSEKSEKTEDRKRIDLTKNEFDLTNERFLVPEMIFHPADLG 341
           V   SEKTE+RK+IDLTKNEFDLTNERFLVPEMIFHP+DLG
Sbjct: 301 V---SEKTENRKKIDLTKNEFDLTNERFLVPEMIFHPSDLG 338

[Close]

BLAST of Lsi11G003360 vs. ExPASy TrEMBL
Match: A0A5D3BFL4 (Actin-related protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00760 PE=3 SV=1)

HSP 1 Score: 628.6 bits (1620), Expect = 1.5e-176
Identity = 321/340 (94.41%), Postives = 328/340 (96.47%), Query Frame = 0


Query: 1   MSNVVVLDNGGGLLKAGIGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTAAAAAPEA 60
           MSNVVVLDNGGGLLKAG+GGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTA AA  E 
Sbjct: 1   MSNVVVLDNGGGLLKAGVGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTATAAT-EP 60

Query: 61  PSDLDLTSASVRRPIDRGYLINPDLQRDIWSNLFTSLLHVNPSNSSLLLTEPLFTLPSIQ 120
            SDLDLTSASVRRPIDRGYLINPDLQRDIWS+LF+SLLHVNPSNSSLLLTEPLFTLPSIQ
Sbjct: 61  LSDLDLTSASVRRPIDRGYLINPDLQRDIWSHLFSSLLHVNPSNSSLLLTEPLFTLPSIQ 120

Query: 121 GATDELVFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVF 180
            ATDELVFEDFNF+SLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVF
Sbjct: 121 RATDELVFEDFNFSSLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVF 180

Query: 181 QNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDLQ 240
           QNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDLQ
Sbjct: 181 QNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDLQ 240

Query: 241 IARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRFLSLTDE-ASSPSLGVKKDVIELD 300
           IARKPGK+N FRCTYVLPDGISYTRGFVKNPDEAKR+LSLTDE ASSPSLGVKKD IELD
Sbjct: 241 IARKPGKDNFFRCTYVLPDGISYTRGFVKNPDEAKRYLSLTDEKASSPSLGVKKDAIELD 300

Query: 301 VSEKSEKTEDRKRIDLTKNEFDLTNERFLVPEMIFHPADL 340
           V   SEKTED+KRIDLTKNEFDLTNERFLVPEMIFHPADL
Sbjct: 301 V---SEKTEDKKRIDLTKNEFDLTNERFLVPEMIFHPADL 336

[Close]

BLAST of Lsi11G003360 vs. NCBI nr
Match: KAG6599388.1 (Actin-related protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 635.2 bits (1637), Expect = 3.3e-178
Identity = 322/341 (94.43%), Postives = 331/341 (97.07%), Query Frame = 0


Query: 1   MSNVVVLDNGGGLLKAGIGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTT-AAAAAPE 60
           MSNVVVLDNGGGL+KAG GGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTT AAAAA E
Sbjct: 1   MSNVVVLDNGGGLIKAGFGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTAAAAAATE 60

Query: 61  APSDLDLTSASVRRPIDRGYLINPDLQRDIWSNLFTSLLHVNPSNSSLLLTEPLFTLPSI 120
           A SDLDLTSASVRRPIDRGYLINPDLQRDIWS+LFTSLLHV+PSNSSLLLTEPLFTLPSI
Sbjct: 61  ASSDLDLTSASVRRPIDRGYLINPDLQRDIWSHLFTSLLHVSPSNSSLLLTEPLFTLPSI 120

Query: 121 QGATDELVFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPV 180
           Q ATDEL+FEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPV
Sbjct: 121 QRATDELIFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPV 180

Query: 181 FQNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDL 240
           FQNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFI+DDVKEKLCFVSLNVPRDL
Sbjct: 181 FQNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIIDDVKEKLCFVSLNVPRDL 240

Query: 241 QIARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRFLSLTDEASSPSLGVKKDVIELD 300
           QIARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKR+LSLTDEASSPSLGVK D IELD
Sbjct: 241 QIARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRYLSLTDEASSPSLGVKNDEIELD 300

Query: 301 VSEKSEKTEDRKRIDLTKNEFDLTNERFLVPEMIFHPADLG 341
           V   SEKTE+RK+IDLTKNEFDLTNERFLVPEMIFHP+DLG
Sbjct: 301 V---SEKTENRKKIDLTKNEFDLTNERFLVPEMIFHPSDLG 338

[Close]

BLAST of Lsi11G003360 vs. NCBI nr
Match: KAG7030374.1 (Actin-related protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 634.4 bits (1635), Expect = 5.7e-178
Identity = 322/343 (93.88%), Postives = 331/343 (96.50%), Query Frame = 0


Query: 1   MSNVVVLDNGGGLLKAGIGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTT---AAAAA 60
           MSNVVVLDNGGGL+KAG GGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTT   AAAAA
Sbjct: 1   MSNVVVLDNGGGLIKAGFGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTAAAAAAAA 60

Query: 61  PEAPSDLDLTSASVRRPIDRGYLINPDLQRDIWSNLFTSLLHVNPSNSSLLLTEPLFTLP 120
            EA SDLDLTSASVRRPIDRGYLINPDLQRDIWS+LFTSLLHV+PSNSSLLLTEPLFTLP
Sbjct: 61  AEASSDLDLTSASVRRPIDRGYLINPDLQRDIWSHLFTSLLHVSPSNSSLLLTEPLFTLP 120

Query: 121 SIQGATDELVFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAA 180
           SIQ ATDEL+FEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAA
Sbjct: 121 SIQRATDELIFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAA 180

Query: 181 PVFQNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPR 240
           PVFQNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFI+DDVKEKLCFVSLNVPR
Sbjct: 181 PVFQNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIIDDVKEKLCFVSLNVPR 240

Query: 241 DLQIARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRFLSLTDEASSPSLGVKKDVIE 300
           DLQIARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKR+LSLTDEASSPSLGVK D IE
Sbjct: 241 DLQIARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRYLSLTDEASSPSLGVKNDEIE 300

Query: 301 LDVSEKSEKTEDRKRIDLTKNEFDLTNERFLVPEMIFHPADLG 341
           LDV   SEKTE+RK+IDLTKNEFDLTNERFLVPEMIFHP+DLG
Sbjct: 301 LDV---SEKTENRKKIDLTKNEFDLTNERFLVPEMIFHPSDLG 340

[Close]

BLAST of Lsi11G003360 vs. NCBI nr
Match: XP_022999158.1 (actin-related protein 6 [Cucurbita maxima] >XP_022999160.1 actin-related protein 6 [Cucurbita maxima])

HSP 1 Score: 632.9 bits (1631), Expect = 1.7e-177
Identity = 320/342 (93.57%), Postives = 330/342 (96.49%), Query Frame = 0


Query: 1   MSNVVVLDNGGGLLKAGIGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTT--AAAAAP 60
           MSNVVVLDNGGGL+KAG GGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTT   A AA 
Sbjct: 1   MSNVVVLDNGGGLIKAGFGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTTATATAAA 60

Query: 61  EAPSDLDLTSASVRRPIDRGYLINPDLQRDIWSNLFTSLLHVNPSNSSLLLTEPLFTLPS 120
           EA SDLDLTSASVRRPIDRGYLINPDLQRDIWS+LFTSLLHV+PSNSSLLLTEPLFTLPS
Sbjct: 61  EASSDLDLTSASVRRPIDRGYLINPDLQRDIWSHLFTSLLHVSPSNSSLLLTEPLFTLPS 120

Query: 121 IQGATDELVFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAP 180
           IQ ATDEL+FEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAP
Sbjct: 121 IQRATDELIFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAP 180

Query: 181 VFQNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRD 240
           VFQNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFI+DDVKEKLCFVSLNVPRD
Sbjct: 181 VFQNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIIDDVKEKLCFVSLNVPRD 240

Query: 241 LQIARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRFLSLTDEASSPSLGVKKDVIEL 300
           LQIARKPGK+NLFRCTYVLPDGISYTRGFVKNPDEAKR+LSLTDEASSPSLGVK DVIEL
Sbjct: 241 LQIARKPGKDNLFRCTYVLPDGISYTRGFVKNPDEAKRYLSLTDEASSPSLGVKNDVIEL 300

Query: 301 DVSEKSEKTEDRKRIDLTKNEFDLTNERFLVPEMIFHPADLG 341
           DV   SEKTE+RK+IDLTKNEFDLTNERFLVPEMIFHP+DLG
Sbjct: 301 DV---SEKTENRKKIDLTKNEFDLTNERFLVPEMIFHPSDLG 339

[Close]

BLAST of Lsi11G003360 vs. NCBI nr
Match: XP_016900982.1 (PREDICTED: actin-related protein 6 [Cucumis melo] >XP_016900983.1 PREDICTED: actin-related protein 6 [Cucumis melo] >XP_016900985.1 PREDICTED: actin-related protein 6 [Cucumis melo] >KAA0063537.1 actin-related protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 631.3 bits (1627), Expect = 4.8e-177
Identity = 322/341 (94.43%), Postives = 329/341 (96.48%), Query Frame = 0


Query: 1   MSNVVVLDNGGGLLKAGIGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTAAAAAPEA 60
           MSNVVVLDNGGGLLKAG+GGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTA AA  E 
Sbjct: 1   MSNVVVLDNGGGLLKAGVGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTATAAT-EP 60

Query: 61  PSDLDLTSASVRRPIDRGYLINPDLQRDIWSNLFTSLLHVNPSNSSLLLTEPLFTLPSIQ 120
            SDLDLTSASVRRPIDRGYLINPDLQRDIWS+LF+SLLHVNPSNSSLLLTEPLFTLPSIQ
Sbjct: 61  LSDLDLTSASVRRPIDRGYLINPDLQRDIWSHLFSSLLHVNPSNSSLLLTEPLFTLPSIQ 120

Query: 121 GATDELVFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVF 180
            ATDELVFEDFNF+SLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVF
Sbjct: 121 RATDELVFEDFNFSSLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVF 180

Query: 181 QNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDLQ 240
           QNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDLQ
Sbjct: 181 QNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDLQ 240

Query: 241 IARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRFLSLTDE-ASSPSLGVKKDVIELD 300
           IARKPGK+N FRCTYVLPDGISYTRGFVKNPDEAKR+LSLTDE ASSPSLGVKKD IELD
Sbjct: 241 IARKPGKDNFFRCTYVLPDGISYTRGFVKNPDEAKRYLSLTDEKASSPSLGVKKDAIELD 300

Query: 301 VSEKSEKTEDRKRIDLTKNEFDLTNERFLVPEMIFHPADLG 341
           V   SEKTED+KRIDLTKNEFDLTNERFLVPEMIFHPADLG
Sbjct: 301 V---SEKTEDKKRIDLTKNEFDLTNERFLVPEMIFHPADLG 337

[Close]

BLAST of Lsi11G003360 vs. NCBI nr
Match: XP_023545835.1 (actin-related protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 630.9 bits (1626), Expect = 6.3e-177
Identity = 317/340 (93.24%), Postives = 325/340 (95.59%), Query Frame = 0


Query: 1   MSNVVVLDNGGGLLKAGIGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTAAAAAPEA 60
           MSNVVVLDNGGGL+KAG GGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTT   AA EA
Sbjct: 1   MSNVVVLDNGGGLIKAGFGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTTTTAAAEA 60

Query: 61  PSDLDLTSASVRRPIDRGYLINPDLQRDIWSNLFTSLLHVNPSNSSLLLTEPLFTLPSIQ 120
            SDLDLTSASVRRPIDRGYLINPDLQRDIWS+LFTSLLHV+PSNSSLLLTEPLFTLPSIQ
Sbjct: 61  SSDLDLTSASVRRPIDRGYLINPDLQRDIWSHLFTSLLHVSPSNSSLLLTEPLFTLPSIQ 120

Query: 121 GATDELVFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVF 180
            ATDEL+FEDFNF SLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVF
Sbjct: 121 RATDELIFEDFNFGSLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVF 180

Query: 181 QNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDLQ 240
           QNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFI+DDVKEKLCFVSLNVPRDLQ
Sbjct: 181 QNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIIDDVKEKLCFVSLNVPRDLQ 240

Query: 241 IARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRFLSLTDEASSPSLGVKKDVIELDV 300
           IARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKR+LSLTDEASSPSLGVK D  ELDV
Sbjct: 241 IARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRYLSLTDEASSPSLGVKNDETELDV 300

Query: 301 SEKSEKTEDRKRIDLTKNEFDLTNERFLVPEMIFHPADLG 341
              SEKTE+RK+IDLTKNEFDLTNERFLVPEMIFHP DLG
Sbjct: 301 ---SEKTENRKKIDLTKNEFDLTNERFLVPEMIFHPIDLG 337

[Close]

BLAST of Lsi11G003360 vs. TAIR 10
Match: AT3G33520.1 (actin-related protein 6 )

HSP 1 Score: 436.8 bits (1122), Expect = 1.6e-122
Identity = 218/340 (64.12%), Postives = 271/340 (79.71%), Query Frame = 0


Query: 1   MSNVVVLDNGGGLLKAGIGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTAAAAAPEA 60
           MSN+VVLDNGGGL+KAG GG+ DP+ +IPNCLY+PLS+KK++HPSP+   TT +      
Sbjct: 1   MSNIVVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPL---TTLS------ 60

Query: 61  PSDLDLTSASVRRPIDRGYLINPDLQRDIWSNLFTSLLHVNPSNSSLLLTEPLFTLPSIQ 120
             ++DLTSA+VRRPIDRGYLIN DLQR+IWS+LFTSLLH+ PS+SSLLLTE   ++PS+Q
Sbjct: 61  -DEIDLTSAAVRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQ 120

Query: 121 GATDELVFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVF 180
             TDELVFEDF F+SLY++   SLVH YEASR+P S+LS+ QCSLVVDCGFSFTHA PV 
Sbjct: 121 RTTDELVFEDFGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVL 180

Query: 181 QNFTLNYAVKRIDLGGKALTNYLKELVSYRALNVMDETFIMDDVKEKLCFVSLNVPRDLQ 240
            NFTLN+A+KRIDLGGKA TNYLKELVSYR++NVMDETF++DD KEKLCFVSL++ RDL+
Sbjct: 181 HNFTLNHAIKRIDLGGKAFTNYLKELVSYRSINVMDETFLVDDAKEKLCFVSLDLLRDLR 240

Query: 241 IARKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRFLSLTDEASSPSLGVKKDVIELDV 300
           +AR      L + TYVLPDG+++T+G+VK+P  AKRFLSL++         K+ V+ +D 
Sbjct: 241 LAR--NGNTLIKSTYVLPDGVTHTKGYVKDPQAAKRFLSLSE---------KESVVVMD- 300

Query: 301 SEKSEKTEDRKRIDLTKNEFDLTNERFLVPEMIFHPADLG 341
                K  +RK+ D+ KNE DLTNERFLVPE +F PADLG
Sbjct: 301 -----KVGERKKADMNKNEIDLTNERFLVPETLFQPADLG 313

[Close]

BLAST of Lsi11G003360 vs. TAIR 10
Match: AT2G42090.1 (actin 9 )

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-26
Identity = 82/276 (29.71%), Postives = 142/276 (51.45%), Query Frame = 0


Query: 5   VVLDNGGGLLKAGIGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTAAAAAPEAPSDL 64
           +V D G G+++AG  GD  P V+ P  + RP   +  L+P+        +    E  ++ 
Sbjct: 4   IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRP---RDGLNPN-------ESYVGEEGHANR 63

Query: 65  DLTSASVRRPIDRGYLINPDLQRDIWSNLFTSLLHVNPSNSSLLLTEPLFTLPSIQGATD 124
           D+   +++ P++ G + N D    IW   F + L V+P    +LLTE  +   + +    
Sbjct: 64  DI--LTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMT 123

Query: 125 ELVFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVFQNFT 184
           +++FE F+  ++YVS   S+++ Y + R            +V+D G   +H  PV++ + 
Sbjct: 124 QIMFESFDVPAMYVS-MQSVLYLYSSGR---------TTGVVLDLGERVSHTVPVYEGYA 183

Query: 185 LNYAVKRIDLGGKALTNYLKELVSYR--ALNVMDETFIMDDVKEKLCFVSLNVPRDLQIA 244
           L + + R+DLGG+ LT+YL E+++ R        E  I+ D+KEKLC+V+L+  ++++  
Sbjct: 184 LPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSAEREIVRDIKEKLCYVALDYEQEME-- 243

Query: 245 RKPGKENLFRCTYVLPDGISYTRGFVKNPDEAKRFL 279
            K  K      TYVLPDG   T        EA+RF+
Sbjct: 244 -KTTKGWTIDKTYVLPDGQEIT-------IEAERFM 247

[Close]

BLAST of Lsi11G003360 vs. TAIR 10
Match: AT1G49240.1 (actin 8 )

HSP 1 Score: 113.6 bits (283), Expect = 3.1e-25
Identity = 77/264 (29.17%), Postives = 133/264 (50.38%), Query Frame = 0


Query: 5   VVLDNGGGLLKAGIGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTAAAAAPEAPSDL 64
           +V DNG G++KAG  GD  P  + P+ + RP       H   + ++   A    EA S  
Sbjct: 10  IVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRH-----HGVMVGMNQKDAYVGDEAQSKR 69

Query: 65  DLTSASVRRPIDRGYLINPDLQRDIWSNLFTSLLHVNPSNSSLLLTEPLFTLPSIQGATD 124
            +   +++ PI+ G + N D    IW + F + L + P    +LLTE      + +    
Sbjct: 70  GI--LTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 129

Query: 125 ELVFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVFQNFT 184
           +++FE FN  ++YV+    L  +  AS R T         +V+D G   +H  P+++ F+
Sbjct: 130 QIMFETFNSPAMYVAIQAVLSLY--ASGRTT--------GIVLDSGDGVSHTVPIYEGFS 189

Query: 185 LNYAVKRIDLGGKALTNYLKELVSYRA--LNVMDETFIMDDVKEKLCFVSLNVPRDLQIA 244
           L +A+ R+DL G+ LT+YL ++++ R        E  I+ D+KEKL FV+++  ++++ +
Sbjct: 190 LPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETS 249

Query: 245 RKPGKENLFRCTYVLPDGISYTRG 267
           +     +     Y LPDG   T G
Sbjct: 250 K---TSSSIEKNYELPDGQVITIG 253

[Close]

BLAST of Lsi11G003360 vs. TAIR 10
Match: AT3G18780.1 (actin 2 )

HSP 1 Score: 113.6 bits (283), Expect = 3.1e-25
Identity = 77/264 (29.17%), Postives = 133/264 (50.38%), Query Frame = 0


Query: 5   VVLDNGGGLLKAGIGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTAAAAAPEAPSDL 64
           +V DNG G++KAG  GD  P  + P+ + RP       H   + ++   A    EA S  
Sbjct: 10  IVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRH-----HGVMVGMNQKDAYVGDEAQSKR 69

Query: 65  DLTSASVRRPIDRGYLINPDLQRDIWSNLFTSLLHVNPSNSSLLLTEPLFTLPSIQGATD 124
            +   +++ PI+ G + N D    IW + F + L + P    +LLTE      + +    
Sbjct: 70  GI--LTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 129

Query: 125 ELVFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVFQNFT 184
           +++FE FN  ++YV+    L  +  AS R T         +V+D G   +H  P+++ F+
Sbjct: 130 QIMFETFNSPAMYVAIQAVLSLY--ASGRTT--------GIVLDSGDGVSHTVPIYEGFS 189

Query: 185 LNYAVKRIDLGGKALTNYLKELVSYRA--LNVMDETFIMDDVKEKLCFVSLNVPRDLQIA 244
           L +A+ R+DL G+ LT+YL ++++ R        E  I+ D+KEKL FV+++  ++++ +
Sbjct: 190 LPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETS 249

Query: 245 RKPGKENLFRCTYVLPDGISYTRG 267
           +     +     Y LPDG   T G
Sbjct: 250 K---TSSSIEKNYELPDGQVITIG 253

[Close]

BLAST of Lsi11G003360 vs. TAIR 10
Match: AT3G18780.2 (actin 2 )

HSP 1 Score: 113.6 bits (283), Expect = 3.1e-25
Identity = 77/264 (29.17%), Postives = 133/264 (50.38%), Query Frame = 0


Query: 5   VVLDNGGGLLKAGIGGDLDPSVIIPNCLYRPLSAKKWLHPSPISISTTAAAAAPEAPSDL 64
           +V DNG G++KAG  GD  P  + P+ + RP       H   + ++   A    EA S  
Sbjct: 10  IVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRH-----HGVMVGMNQKDAYVGDEAQSKR 69

Query: 65  DLTSASVRRPIDRGYLINPDLQRDIWSNLFTSLLHVNPSNSSLLLTEPLFTLPSIQGATD 124
            +   +++ PI+ G + N D    IW + F + L + P    +LLTE      + +    
Sbjct: 70  GI--LTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 129

Query: 125 ELVFEDFNFASLYVSDSPSLVHFYEASRRPTSLLSRAQCSLVVDCGFSFTHAAPVFQNFT 184
           +++FE FN  ++YV+    L  +  AS R T         +V+D G   +H  P+++ F+
Sbjct: 130 QIMFETFNSPAMYVAIQAVLSLY--ASGRTT--------GIVLDSGDGVSHTVPIYEGFS 189

Query: 185 LNYAVKRIDLGGKALTNYLKELVSYRA--LNVMDETFIMDDVKEKLCFVSLNVPRDLQIA 244
           L +A+ R+DL G+ LT+YL ++++ R        E  I+ D+KEKL FV+++  ++++ +
Sbjct: 190 LPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETS 249

Query: 245 RKPGKENLFRCTYVLPDGISYTRG 267
           +     +     Y LPDG   T G
Sbjct: 250 K---TSSSIEKNYELPDGQVITIG 253

The following BLAST results are available for this feature:

BLAST of Lsi11G003360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LGE3	2.3e-121	64.12	Actin-related protein 6 OS=Arabidopsis thaliana OX=3702 GN=ARP6 PE=1 SV=1	[more]
A2WNB0	2.3e-113	61.06	Actin-related protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=ARP6 PE=3 SV=1	[more]
Q5NBI2	2.3e-113	61.06	Actin-related protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ARP6 PE=2 SV...	[more]
P0CM05	8.6e-44	33.63	Actin-like protein ARP6 OS=Cryptococcus neoformans var. neoformans serotype D (s...	[more]
P0CM04	8.6e-44	33.63	Actin-like protein ARP6 OS=Cryptococcus neoformans var. neoformans serotype D (s...	[more]

BLAST of Lsi11G003360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KEJ1	8.0e-178	93.57	actin-related protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111493625 PE=3 SV=1	[more]
A0A1S4DYD3	2.3e-177	94.43	actin-related protein 6 OS=Cucumis melo OX=3656 GN=LOC103496716 PE=3 SV=1	[more]
A0A5A7V987	2.3e-177	94.43	Actin-related protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1G488	1.5e-176	93.26	actin-related protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111450644 PE=3 SV=1	[more]
A0A5D3BFL4	1.5e-176	94.41	Actin-related protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lsi11G003360 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599388.1	3.3e-178	94.43	Actin-related protein 6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7030374.1	5.7e-178	93.88	Actin-related protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022999158.1	1.7e-177	93.57	actin-related protein 6 [Cucurbita maxima] >XP_022999160.1 actin-related protein...	[more]
XP_016900982.1	4.8e-177	94.43	PREDICTED: actin-related protein 6 [Cucumis melo] >XP_016900983.1 PREDICTED: act...	[more]
XP_023545835.1	6.3e-177	93.24	actin-related protein 6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi11G003360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G33520.1	1.6e-122	64.12	actin-related protein 6	[more]
AT2G42090.1	1.3e-26	29.71	actin 9	[more]
AT1G49240.1	3.1e-25	29.17	actin 8	[more]
AT3G18780.1	3.1e-25	29.17	actin 2	[more]
AT3G18780.2	3.1e-25	29.17	actin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004000	Actin family	SMART	SM00268	actin_3	coord: 2..328 e-value: 8.4E-22 score: 88.4
IPR004000	Actin family	PFAM	PF00022	Actin	coord: 3..340 e-value: 9.0E-62 score: 208.9
IPR004000	Actin family	PANTHER	PTHR11937	ACTIN	coord: 5..336
None	No IPR available	GENE3D	3.30.420.40		coord: 1..177 e-value: 1.5E-29 score: 104.7
None	No IPR available	GENE3D	3.90.640.10	Actin; Chain A, domain 4	coord: 194..341 e-value: 1.4E-23 score: 84.7
IPR030054	Actin-related protein 6	PANTHER	PTHR11937:SF47	ACTIN-RELATED PROTEIN 6	coord: 5..336
IPR043129	ATPase, nucleotide binding domain	SUPERFAMILY	53067	Actin-like ATPase domain	coord: 162..340
IPR043129	ATPase, nucleotide binding domain	SUPERFAMILY	53067	Actin-like ATPase domain	coord: 3..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G003360.1	Lsi11G003360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0043486	histone exchange
biological_process	GO:0009910	negative regulation of flower development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006970	response to osmotic stress
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0009845	seed germination
biological_process	GO:0006338	chromatin remodeling
cellular_component	GO:0000812	Swr1 complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0031491	nucleosome binding