Lsi11G002240 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTTCAAGAACAAACCCACATCAAGCCCTGCTTTGTGAGCGTAAATCATCCCTTCCACCAGTCCCACCATTGTCGAAGCTATTGTGATCTGATTCGCCAGCTTCGCAAATTGCCCTTTCCCACTTTCTCCCATGTAATTCACTTTCCCTAGTAAGGAAAATAACGGGCTCAATCGCCGGACTTCGCCTTCATCGCCGCCGGCGAAGATTGCCAGAGAGGCATTCTTGGCGCCGCGATCGCCGCCTGATACTGGAGCGTCGATTGCCCCACAGCCCTTGGCGGTTGCCGCGGCGGCGATTTCAGAGGCGAGTGAGGGTTCGGAAGTGGTCATGTCGACGAGGACGCCGCCGGGGCGAAGGCCGGCGAGTGCGCCGGAGGTGGGATTGAGGAGGACGGAGCGGACGTCGGAGGGGTAA ATGGCTAAGGAAAATAACGGGCTCAATCGCCGGACTTCGCCTTCATCGCCGCCGGCGAAGATTGCCAGAGAGGCATTCTTGGCGCCGCGATCGCCGCCTGATACTGGAGCGTCGATTGCCCCACAGCCCTTGGCGGTTGCCGCGGCGGCGATTTCAGAGGCGAGTGAGGGTTCGGAAGTGGTCATGTCGACGAGGACGCCGCCGGGGCGAAGGCCGGCGAGTGCGCCGGAGGTGGGATTGAGGAGGACGGAGCGGACGTCGGAGGGGTAA ATGGCTAAGGAAAATAACGGGCTCAATCGCCGGACTTCGCCTTCATCGCCGCCGGCGAAGATTGCCAGAGAGGCATTCTTGGCGCCGCGATCGCCGCCTGATACTGGAGCGTCGATTGCCCCACAGCCCTTGGCGGTTGCCGCGGCGGCGATTTCAGAGGCGAGTGAGGGTTCGGAAGTGGTCATGTCGACGAGGACGCCGCCGGGGCGAAGGCCGGCGAGTGCGCCGGAGGTGGGATTGAGGAGGACGGAGCGGACGTCGGAGGGGTAA MAKENNGLNRRTSPSSPPAKIAREAFLAPRSPPDTGASIAPQPLAVAAAAISEASEGSEVVMSTRTPPGRRPASAPEVGLRRTERTSEG Homology
BLAST of Lsi11G002240 vs. ExPASy TrEMBL
Match: A0A0A9EAU2 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 3.1e-17 Identity = 57/84 (67.86%), Postives = 62/84 (73.81%), Query Frame = 0
BLAST of Lsi11G002240 vs. ExPASy TrEMBL
Match: A0A0A9GN46 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 5.9e-16 Identity = 55/84 (65.48%), Postives = 61/84 (72.62%), Query Frame = 0
BLAST of Lsi11G002240 vs. ExPASy TrEMBL
Match: A0A0P0V844 (Os01g0742350 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0742350 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 5.0e-15 Identity = 54/85 (63.53%), Postives = 59/85 (69.41%), Query Frame = 0
BLAST of Lsi11G002240 vs. ExPASy TrEMBL
Match: C7IY07 (Os01g0742350 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0742350 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 5.0e-15 Identity = 54/85 (63.53%), Postives = 59/85 (69.41%), Query Frame = 0
BLAST of Lsi11G002240 vs. ExPASy TrEMBL
Match: A0A0A9JAG2 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.4e-14 Identity = 53/84 (63.10%), Postives = 59/84 (70.24%), Query Frame = 0
BLAST of Lsi11G002240 vs. NCBI nr
Match: CBI27998.3 (unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 98.6 bits (244), Expect = 2.9e-17 Identity = 56/76 (73.68%), Postives = 58/76 (76.32%), Query Frame = 0
BLAST of Lsi11G002240 vs. NCBI nr
Match: KAF8091058.1 (hypothetical protein N665_0455s0016 [Sinapis alba]) HSP 1 Score: 93.6 bits (231), Expect = 9.3e-16 Identity = 58/86 (67.44%), Postives = 60/86 (69.77%), Query Frame = 0
BLAST of Lsi11G002240 vs. NCBI nr
Match: KAB8083453.1 (hypothetical protein EE612_005646 [Oryza sativa] >BAH91293.1 Os01g0742350 [Oryza sativa Japonica Group] >BAS74285.1 Os01g0742350 [Oryza sativa Japonica Group]) HSP 1 Score: 90.1 bits (222), Expect = 1.0e-14 Identity = 54/85 (63.53%), Postives = 59/85 (69.41%), Query Frame = 0
BLAST of Lsi11G002240 vs. NCBI nr
Match: KAF4390052.1 (hypothetical protein F8388_002994 [Cannabis sativa]) HSP 1 Score: 85.1 bits (209), Expect = 3.3e-13 Identity = 49/73 (67.12%), Postives = 54/73 (73.97%), Query Frame = 0
BLAST of Lsi11G002240 vs. NCBI nr
Match: KAF1862290.1 (hypothetical protein Lal_00026816 [Lupinus albus]) HSP 1 Score: 71.2 bits (173), Expect = 4.9e-09 Identity = 41/57 (71.93%), Postives = 45/57 (78.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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