Lsi11G001620 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G001620
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	stress-response A/B barrel domain-containing protein UP3
Location	chr11: 1742197 .. 1742976 (-)
RNA-Seq Expression	Lsi11G001620
Synteny	Lsi11G001620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTCCTCTTCTCTCCGGACTTTCTCCACGTTATCTTCCACTTCCAGGCATCTCCGCCTCCGCCGCCCAAACCCTTCTCTTTCTTTCCGACCATTCTCCGTCAACATGTCCGCCGCTCACACTCAACCAATCGAGCACGTCGTCCTCTTTAAGGTCAAAGACGGCCTCGATTCCTCCAAGGTAAACGACATACTCACCGGCCTCAATGGCCTCATCTCCCTCGACCAAGTCCTCCATCTCACCGCCGGCCCCATCCTCCGCAACCGCTCCTCCTCCTTCACCTTCACTCACCTCCTTCACAGCCGCTACCCCTCCAAGGAAGATCTCTCCATCTACTCCGCCCACCCCGCCCACATGAACGTGGTCAAGCAATTTGTTCTTCCCATCTGCGATGACATCATGGCTGTTGATTGGGTCGCCGATGCTTTGAAAGGCCCCGTCGTCGCACCTCCTGGCTCTGCCCTTAGACTCACCTTCCTCAAACTCAAGGAGAATCTGGGTGAGGACATTAAGAGCGAGATCTTGGAGGTCATTGCAGGACTGAGGGAGAAATTAGGGCCCAATGTCCAGCTGACGGTGGGCGAGAACTTTTCCCCGGCCAGAGCCAAGGGGTTTTCAATCGCTTCCATTGCAATTTTCCCAGGGCCAAATGAGTTGGAGGCGGCGGCTTCAGACCAAGAAATGGTGGAATTGCAGAAAGAGAAGGTCAGGGAGTATTTGGAGAGTGTAATTGTGCTGGATTACGTGGTTCCGCCGCCGCAAACGGCGAGTCTCTAA

mRNA sequence

ATGCTCTCCTCTTCTCTCCGGACTTTCTCCACGTTATCTTCCACTTCCAGGCATCTCCGCCTCCGCCGCCCAAACCCTTCTCTTTCTTTCCGACCATTCTCCGTCAACATGTCCGCCGCTCACACTCAACCAATCGAGCACGTCGTCCTCTTTAAGGTCAAAGACGGCCTCGATTCCTCCAAGGTAAACGACATACTCACCGGCCTCAATGGCCTCATCTCCCTCGACCAAGTCCTCCATCTCACCGCCGGCCCCATCCTCCGCAACCGCTCCTCCTCCTTCACCTTCACTCACCTCCTTCACAGCCGCTACCCCTCCAAGGAAGATCTCTCCATCTACTCCGCCCACCCCGCCCACATGAACGTGGTCAAGCAATTTGTTCTTCCCATCTGCGATGACATCATGGCTGTTGATTGGGTCGCCGATGCTTTGAAAGGCCCCGTCGTCGCACCTCCTGGCTCTGCCCTTAGACTCACCTTCCTCAAACTCAAGGAGAATCTGGGTGAGGACATTAAGAGCGAGATCTTGGAGGTCATTGCAGGACTGAGGGAGAAATTAGGGCCCAATGTCCAGCTGACGGTGGGCGAGAACTTTTCCCCGGCCAGAGCCAAGGGGTTTTCAATCGCTTCCATTGCAATTTTCCCAGGGCCAAATGAGTTGGAGGCGGCGGCTTCAGACCAAGAAATGGTGGAATTGCAGAAAGAGAAGGTCAGGGAGTATTTGGAGAGTGTAATTGTGCTGGATTACGTGGTTCCGCCGCCGCAAACGGCGAGTCTCTAA

Coding sequence (CDS)

ATGCTCTCCTCTTCTCTCCGGACTTTCTCCACGTTATCTTCCACTTCCAGGCATCTCCGCCTCCGCCGCCCAAACCCTTCTCTTTCTTTCCGACCATTCTCCGTCAACATGTCCGCCGCTCACACTCAACCAATCGAGCACGTCGTCCTCTTTAAGGTCAAAGACGGCCTCGATTCCTCCAAGGTAAACGACATACTCACCGGCCTCAATGGCCTCATCTCCCTCGACCAAGTCCTCCATCTCACCGCCGGCCCCATCCTCCGCAACCGCTCCTCCTCCTTCACCTTCACTCACCTCCTTCACAGCCGCTACCCCTCCAAGGAAGATCTCTCCATCTACTCCGCCCACCCCGCCCACATGAACGTGGTCAAGCAATTTGTTCTTCCCATCTGCGATGACATCATGGCTGTTGATTGGGTCGCCGATGCTTTGAAAGGCCCCGTCGTCGCACCTCCTGGCTCTGCCCTTAGACTCACCTTCCTCAAACTCAAGGAGAATCTGGGTGAGGACATTAAGAGCGAGATCTTGGAGGTCATTGCAGGACTGAGGGAGAAATTAGGGCCCAATGTCCAGCTGACGGTGGGCGAGAACTTTTCCCCGGCCAGAGCCAAGGGGTTTTCAATCGCTTCCATTGCAATTTTCCCAGGGCCAAATGAGTTGGAGGCGGCGGCTTCAGACCAAGAAATGGTGGAATTGCAGAAAGAGAAGGTCAGGGAGTATTTGGAGAGTGTAATTGTGCTGGATTACGTGGTTCCGCCGCCGCAAACGGCGAGTCTCTAA

Protein sequence

MLSSSLRTFSTLSSTSRHLRLRRPNPSLSFRPFSVNMSAAHTQPIEHVVLFKVKDGLDSSKVNDILTGLNGLISLDQVLHLTAGPILRNRSSSFTFTHLLHSRYPSKEDLSIYSAHPAHMNVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTFLKLKENLGEDIKSEILEVIAGLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQKEKVREYLESVIVLDYVVPPPQTASL

Homology

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BLAST of Lsi11G001620 vs. ExPASy Swiss-Prot
Match: Q9SIP1 (Stress-response A/B barrel domain-containing protein UP3 OS=Arabidopsis thaliana OX=3702 GN=UP3 PE=1 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 9.5e-64
Identity = 139/260 (53.46%), Postives = 179/260 (68.85%), Query Frame = 0


Query: 1   MLSSSLR-TFSTLSSTSRHLRLRRPNPSLSFRPFSV-NMSAAHTQPIEHVVLFKVKDGLD 60
           ++SS L  T ST   +  +LRL      L  R FSV + S   +Q IEH+VLFK KD  D
Sbjct: 9   LISSPLAFTISTTKHSRINLRL------LPRRSFSVMSSSTPQSQIIEHIVLFKTKDDAD 68

Query: 61  SSKVNDILTGLNGLISLDQVLHLTAGPILRNRSSSFTFTHLLHSRYPSKEDLSIYSAHPA 120
           S+K+  ++  LN L  LDQVLH++  P L   SS+  FTH+LHSRY SKEDL+ Y+AHP 
Sbjct: 69  STKITSMINNLNALAYLDQVLHISTSP-LHRISSATAFTHVLHSRYESKEDLASYAAHPD 128

Query: 121 HMNVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTFLKLKENLGEDIKSEILEV 180
           H+ VVK+ VLPICDDIMAVDW+AD + G V   PGS  +LT LKLKE++ ++ KSEI  V
Sbjct: 129 HVRVVKESVLPICDDIMAVDWIADRIPGTVAPLPGSVAKLTLLKLKEDVADEAKSEITGV 188

Query: 181 IAGLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQKEKVR 240
           I GL EK     Q+TVGENFSPARAKGFSIASIA F   +E+EA  + +E+V  QK+KVR
Sbjct: 189 IKGLSEKFPGIDQITVGENFSPARAKGFSIASIAYFKDLSEMEAVDAQKELVNSQKDKVR 248

Query: 241 EYLESVIVLDYVVPPPQTAS 259
           +Y++S IV+++VVP    +S
Sbjct: 249 DYVDSTIVVEFVVPSSSQSS 261

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BLAST of Lsi11G001620 vs. ExPASy Swiss-Prot
Match: Q9SYD8 (Stress-response A/B barrel domain-containing protein DABB1 OS=Arabidopsis thaliana OX=3702 GN=DABB1 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.9e-44
Identity = 101/210 (48.10%), Postives = 144/210 (68.57%), Query Frame = 0


Query: 45  IEHVVLFKVK-DGLDSSKVNDILTGLNGLISLDQVLHLTAGPILR-NRSSSFTFTHLLHS 104
           +EHVVLFK+  D +DS K+N ++ G+N L++LDQVLHL  G I R   +++  FTH+LHS
Sbjct: 5   VEHVVLFKLNDDDVDSGKINSMVNGINELVNLDQVLHLYCGSIHRLITTTASDFTHVLHS 64

Query: 105 RYPSKEDLSIYSAHPAHMNVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTFLK 164
           RY SKEDL+ Y+ HP H+ VVK+    I +DIMAVDW+A+     +  P GS  ++T LK
Sbjct: 65  RYRSKEDLNAYAIHPDHVRVVKESE-SIREDIMAVDWIAEQAPEALAPPLGSIGKITLLK 124

Query: 165 LKENLGEDIKSEILEVIAGLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEA 224
           LKEN+ E+ K EI+EV   ++EK     Q+TVGENFSP R+K FSI SI+ F    E+EA
Sbjct: 125 LKENVMEEAKLEIMEV---MKEKFEGIDQITVGENFSPGRSKDFSIGSISYFRDLGEIEA 184

Query: 225 AASDQEMVELQKEKVREYLESVIVLDYVVP 253
                + ++LQ +K+R+Y++  IV+++ VP
Sbjct: 185 V---DDQMKLQNDKIRDYVDDTIVVEFNVP 207

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BLAST of Lsi11G001620 vs. ExPASy Swiss-Prot
Match: Q9LUV2 (Stress-response A/B barrel domain-containing protein HS1 OS=Arabidopsis thaliana OX=3702 GN=HS1 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.9e-06
Identity = 29/99 (29.29%), Postives = 51/99 (51.52%), Query Frame = 0


Query: 44  PIEHVVLFKVKDGLDSSKVNDILTGLNGLISLDQ---VLHLTAGPILRNRSSSFTFTHLL 103
           P++HV+L   KDG+   K+ +++ G   L++L +     H      + N      +TH+ 
Sbjct: 7   PVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQG--YTHIF 66

Query: 104 HSRYPSKEDLSIYSAHPAHMNVVKQFVLPICDDIMAVDW 140
            S + SKE ++ Y AHPAH+     F L   D ++ +D+
Sbjct: 67  ESTFESKEAVAEYIAHPAHVEFATIF-LGSLDKVLVIDY 102

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BLAST of Lsi11G001620 vs. ExPASy TrEMBL
Match: A0A0A0LET1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000190 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 1.1e-118
Identity = 226/259 (87.26%), Postives = 244/259 (94.21%), Query Frame = 0


Query: 1   MLSSSLRTFSTLSSTSRHLRLRRPNPSLSFRPFSVNMSAAHTQPIEHVVLFKVKDGLDSS 60
           MLSS+LRT +TL STSR+LRL R NP  S RPFSV MS AHTQPIEH+VLFKVK+G+DSS
Sbjct: 25  MLSSALRTLTTLPSTSRNLRLLRLNPCPSSRPFSVKMS-AHTQPIEHIVLFKVKEGIDSS 84

Query: 61  KVNDILTGLNGLISLDQVLHLTAGPILRNRSSSFTFTHLLHSRYPSKEDLSIYSAHPAHM 120
           KVND+L GLNGLISLDQVLHLTAGPILRNRSSS +FTHLLHSRYPSKEDLSIYSAHPAHM
Sbjct: 85  KVNDMLNGLNGLISLDQVLHLTAGPILRNRSSSSSFTHLLHSRYPSKEDLSIYSAHPAHM 144

Query: 121 NVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTFLKLKENLGEDIKSEILEVIA 180
           NVVKQFVLPICDDIMAVDWVADAL+G +V PPGSALR+TFLKLKENLG+++K +ILEVIA
Sbjct: 145 NVVKQFVLPICDDIMAVDWVADALQGSLVPPPGSALRVTFLKLKENLGDEVKGQILEVIA 204

Query: 181 GLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQKEKVREY 240
           GLREKLGPNVQLTVGENFSPARAKGFSIASIAI PGPNELEAAASD+EMVELQKEKVRE+
Sbjct: 205 GLREKLGPNVQLTVGENFSPARAKGFSIASIAILPGPNELEAAASDKEMVELQKEKVREH 264

Query: 241 LESVIVLDYVVPPPQTASL 260
           LESVIV+DYVVPPPQTASL
Sbjct: 265 LESVIVVDYVVPPPQTASL 282

[Close]

BLAST of Lsi11G001620 vs. ExPASy TrEMBL
Match: A0A5D3CI21 (Stress-response A/B barrel domain-containing protein UP3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001200 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 7.7e-117
Identity = 225/259 (86.87%), Postives = 244/259 (94.21%), Query Frame = 0


Query: 1   MLSSSLRTFSTLSSTSRHLRLRRPNPSLSFRPFSVNMSAAHTQPIEHVVLFKVKDGLDSS 60
           MLSS+LRT+STL  +SR+LR  R NP  S RPFSVNMS AHTQPIEH+VLFKVKDGLDSS
Sbjct: 1   MLSSALRTWSTLPFSSRNLRRLRLNPCHSSRPFSVNMS-AHTQPIEHIVLFKVKDGLDSS 60

Query: 61  KVNDILTGLNGLISLDQVLHLTAGPILRNRSSSFTFTHLLHSRYPSKEDLSIYSAHPAHM 120
           KVND+L GLNGL SLDQVLHLTAGPILRNRSSS TFTHLLHSRYPSKEDLSIYSAHPAHM
Sbjct: 61  KVNDMLNGLNGLNSLDQVLHLTAGPILRNRSSS-TFTHLLHSRYPSKEDLSIYSAHPAHM 120

Query: 121 NVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTFLKLKENLGEDIKSEILEVIA 180
           NVVKQFVLPICDDIMAVDWVADAL+GP+V  PGSALR+TFLKLKENLG+++K +ILEVIA
Sbjct: 121 NVVKQFVLPICDDIMAVDWVADALQGPLVPSPGSALRVTFLKLKENLGDEVKGQILEVIA 180

Query: 181 GLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQKEKVREY 240
           G+REKLGPNVQLTVG+NFSPARAKGFSIASIAIFPGPNELEAAASD+EMVELQKEKVRE+
Sbjct: 181 GMREKLGPNVQLTVGDNFSPARAKGFSIASIAIFPGPNELEAAASDKEMVELQKEKVREH 240

Query: 241 LESVIVLDYVVPPPQTASL 260
           LESVIV+DYVVPPP+TASL
Sbjct: 241 LESVIVVDYVVPPPKTASL 257

[Close]

BLAST of Lsi11G001620 vs. ExPASy TrEMBL
Match: A0A1S3CBB4 (stress-response A/B barrel domain-containing protein UP3 OS=Cucumis melo OX=3656 GN=LOC103498768 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 7.7e-117
Identity = 225/259 (86.87%), Postives = 244/259 (94.21%), Query Frame = 0


Query: 1   MLSSSLRTFSTLSSTSRHLRLRRPNPSLSFRPFSVNMSAAHTQPIEHVVLFKVKDGLDSS 60
           MLSS+LRT+STL  +SR+LR  R NP  S RPFSVNMS AHTQPIEH+VLFKVKDGLDSS
Sbjct: 1   MLSSALRTWSTLPFSSRNLRRLRLNPCHSSRPFSVNMS-AHTQPIEHIVLFKVKDGLDSS 60

Query: 61  KVNDILTGLNGLISLDQVLHLTAGPILRNRSSSFTFTHLLHSRYPSKEDLSIYSAHPAHM 120
           KVND+L GLNGL SLDQVLHLTAGPILRNRSSS TFTHLLHSRYPSKEDLSIYSAHPAHM
Sbjct: 61  KVNDMLNGLNGLNSLDQVLHLTAGPILRNRSSS-TFTHLLHSRYPSKEDLSIYSAHPAHM 120

Query: 121 NVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTFLKLKENLGEDIKSEILEVIA 180
           NVVKQFVLPICDDIMAVDWVADAL+GP+V  PGSALR+TFLKLKENLG+++K +ILEVIA
Sbjct: 121 NVVKQFVLPICDDIMAVDWVADALQGPLVPSPGSALRVTFLKLKENLGDEVKGQILEVIA 180

Query: 181 GLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQKEKVREY 240
           G+REKLGPNVQLTVG+NFSPARAKGFSIASIAIFPGPNELEAAASD+EMVELQKEKVRE+
Sbjct: 181 GMREKLGPNVQLTVGDNFSPARAKGFSIASIAIFPGPNELEAAASDKEMVELQKEKVREH 240

Query: 241 LESVIVLDYVVPPPQTASL 260
           LESVIV+DYVVPPP+TASL
Sbjct: 241 LESVIVVDYVVPPPKTASL 257

[Close]

BLAST of Lsi11G001620 vs. ExPASy TrEMBL
Match: A0A6J1G4Q8 (stress-response A/B barrel domain-containing protein UP3-like OS=Cucurbita moschata OX=3662 GN=LOC111450717 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.4e-110
Identity = 215/259 (83.01%), Postives = 233/259 (89.96%), Query Frame = 0


Query: 1   MLSSSLRTFSTLSSTSRHLRLRRPNPSLSFRPFSVNMSAAHTQPIEHVVLFKVKDGLDSS 60
           MLS +LRT S L S+SRHLRL RPN   SFRPFSVNMS  HT PIEHVVLFKVKDG+DSS
Sbjct: 1   MLSLALRTISMLPSSSRHLRL-RPNHRPSFRPFSVNMS-THTTPIEHVVLFKVKDGVDSS 60

Query: 61  KVNDILTGLNGLISLDQVLHLTAGPILRNRSSSFTFTHLLHSRYPSKEDLSIYSAHPAHM 120
           KVND+LTGLN L SL+QVLHLTA P+LRN SS+  FTHLLHSRYPSKEDLS YSAH AH+
Sbjct: 61  KVNDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHV 120

Query: 121 NVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTFLKLKENLGEDIKSEILEVIA 180
           +VVKQFVLPICDDIMAVDWVADAL+GPV APPGSALR+TFLKLKENL E++K+EILEVIA
Sbjct: 121 DVVKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIA 180

Query: 181 GLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQKEKVREY 240
           GLREKLGPNVQLTVGENFSP RAKG+SIASIAIFPGP ELEAA+SD EMVEL KEKVRE+
Sbjct: 181 GLREKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREH 240

Query: 241 LESVIVLDYVVPPPQTASL 260
           LESVIV+DYVVPP QTASL
Sbjct: 241 LESVIVVDYVVPPAQTASL 257

[Close]

BLAST of Lsi11G001620 vs. ExPASy TrEMBL
Match: A0A6J1KGF6 (stress-response A/B barrel domain-containing protein UP3-like OS=Cucurbita maxima OX=3661 GN=LOC111493663 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.2e-109
Identity = 213/259 (82.24%), Postives = 233/259 (89.96%), Query Frame = 0


Query: 1   MLSSSLRTFSTLSSTSRHLRLRRPNPSLSFRPFSVNMSAAHTQPIEHVVLFKVKDGLDSS 60
           MLS +LRT STL S+SRHLR  RP+   SFRPFSVNMS  HT PIEHVVLFKVKDG+DSS
Sbjct: 1   MLSLALRTISTLPSSSRHLR-PRPHHRPSFRPFSVNMS-THTPPIEHVVLFKVKDGVDSS 60

Query: 61  KVNDILTGLNGLISLDQVLHLTAGPILRNRSSSFTFTHLLHSRYPSKEDLSIYSAHPAHM 120
           KVND+LTGLN L SL+QVLHLTA P+LRN SS+  FTHLLHSRYPSKEDLS YSAH AH+
Sbjct: 61  KVNDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHV 120

Query: 121 NVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTFLKLKENLGEDIKSEILEVIA 180
           +VVKQFVLPICDDIMAVDWVADAL+GPV APPGSALR+TFLKLKENL +++K+EILEVIA
Sbjct: 121 DVVKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAQEVKNEILEVIA 180

Query: 181 GLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQKEKVREY 240
           GLREKLGPNVQLTVGENFSP RAKG+SIASIAIFPGP ELEAA+SD EMVEL KEKVRE+
Sbjct: 181 GLREKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREH 240

Query: 241 LESVIVLDYVVPPPQTASL 260
           LESVIV+DYVVPP QTASL
Sbjct: 241 LESVIVVDYVVPPAQTASL 257

[Close]

BLAST of Lsi11G001620 vs. NCBI nr
Match: XP_038889133.1 (stress-response A/B barrel domain-containing protein UP3 [Benincasa hispida])

HSP 1 Score: 451.8 bits (1161), Expect = 3.9e-123
Identity = 239/259 (92.28%), Postives = 248/259 (95.75%), Query Frame = 0


Query: 1   MLSSSLRTFSTLSSTSRHLRLRRPNPSLSFRPFSVNMSAAHTQPIEHVVLFKVKDGLDSS 60
           MLSS+LR+FSTL STSRHLRLRR NPS SFRPFSVNMS AHTQPIEHVVLFKVKDGLDSS
Sbjct: 1   MLSSALRSFSTLPSTSRHLRLRRLNPSPSFRPFSVNMS-AHTQPIEHVVLFKVKDGLDSS 60

Query: 61  KVNDILTGLNGLISLDQVLHLTAGPILRNRSSSFTFTHLLHSRYPSKEDLSIYSAHPAHM 120
           KVND+LTGLNGLISLDQVLH+TAGPILRNRSSS TFTHLLHSRY SKEDLSIYSAHPAH 
Sbjct: 61  KVNDMLTGLNGLISLDQVLHITAGPILRNRSSSSTFTHLLHSRYSSKEDLSIYSAHPAHT 120

Query: 121 NVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTFLKLKENLGEDIKSEILEVIA 180
           NVVKQFVLPICDDIMAVDWVADALKGP+VAP GSALRLTFLKLKENLGE++KSEILEVIA
Sbjct: 121 NVVKQFVLPICDDIMAVDWVADALKGPIVAPSGSALRLTFLKLKENLGEEVKSEILEVIA 180

Query: 181 GLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQKEKVREY 240
           GLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAA SDQEMVELQKEKVRE+
Sbjct: 181 GLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAVSDQEMVELQKEKVREH 240

Query: 241 LESVIVLDYVVPPPQTASL 260
           LESVIV+DYVV  PQTASL
Sbjct: 241 LESVIVVDYVV--PQTASL 256

[Close]

BLAST of Lsi11G001620 vs. NCBI nr
Match: XP_011648585.1 (stress-response A/B barrel domain-containing protein UP3 [Cucumis sativus] >KGN60510.1 hypothetical protein Csa_019495 [Cucumis sativus])

HSP 1 Score: 436.0 bits (1120), Expect = 2.2e-118
Identity = 226/259 (87.26%), Postives = 244/259 (94.21%), Query Frame = 0


Query: 1   MLSSSLRTFSTLSSTSRHLRLRRPNPSLSFRPFSVNMSAAHTQPIEHVVLFKVKDGLDSS 60
           MLSS+LRT +TL STSR+LRL R NP  S RPFSV MS AHTQPIEH+VLFKVK+G+DSS
Sbjct: 25  MLSSALRTLTTLPSTSRNLRLLRLNPCPSSRPFSVKMS-AHTQPIEHIVLFKVKEGIDSS 84

Query: 61  KVNDILTGLNGLISLDQVLHLTAGPILRNRSSSFTFTHLLHSRYPSKEDLSIYSAHPAHM 120
           KVND+L GLNGLISLDQVLHLTAGPILRNRSSS +FTHLLHSRYPSKEDLSIYSAHPAHM
Sbjct: 85  KVNDMLNGLNGLISLDQVLHLTAGPILRNRSSSSSFTHLLHSRYPSKEDLSIYSAHPAHM 144

Query: 121 NVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTFLKLKENLGEDIKSEILEVIA 180
           NVVKQFVLPICDDIMAVDWVADAL+G +V PPGSALR+TFLKLKENLG+++K +ILEVIA
Sbjct: 145 NVVKQFVLPICDDIMAVDWVADALQGSLVPPPGSALRVTFLKLKENLGDEVKGQILEVIA 204

Query: 181 GLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQKEKVREY 240
           GLREKLGPNVQLTVGENFSPARAKGFSIASIAI PGPNELEAAASD+EMVELQKEKVRE+
Sbjct: 205 GLREKLGPNVQLTVGENFSPARAKGFSIASIAILPGPNELEAAASDKEMVELQKEKVREH 264

Query: 241 LESVIVLDYVVPPPQTASL 260
           LESVIV+DYVVPPPQTASL
Sbjct: 265 LESVIVVDYVVPPPQTASL 282

[Close]

BLAST of Lsi11G001620 vs. NCBI nr
Match: XP_008459729.1 (PREDICTED: stress-response A/B barrel domain-containing protein UP3 [Cucumis melo] >KAA0061470.1 stress-response A/B barrel domain-containing protein UP3 [Cucumis melo var. makuwa] >TYK10804.1 stress-response A/B barrel domain-containing protein UP3 [Cucumis melo var. makuwa])

HSP 1 Score: 429.9 bits (1104), Expect = 1.6e-116
Identity = 225/259 (86.87%), Postives = 244/259 (94.21%), Query Frame = 0


Query: 1   MLSSSLRTFSTLSSTSRHLRLRRPNPSLSFRPFSVNMSAAHTQPIEHVVLFKVKDGLDSS 60
           MLSS+LRT+STL  +SR+LR  R NP  S RPFSVNMS AHTQPIEH+VLFKVKDGLDSS
Sbjct: 1   MLSSALRTWSTLPFSSRNLRRLRLNPCHSSRPFSVNMS-AHTQPIEHIVLFKVKDGLDSS 60

Query: 61  KVNDILTGLNGLISLDQVLHLTAGPILRNRSSSFTFTHLLHSRYPSKEDLSIYSAHPAHM 120
           KVND+L GLNGL SLDQVLHLTAGPILRNRSSS TFTHLLHSRYPSKEDLSIYSAHPAHM
Sbjct: 61  KVNDMLNGLNGLNSLDQVLHLTAGPILRNRSSS-TFTHLLHSRYPSKEDLSIYSAHPAHM 120

Query: 121 NVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTFLKLKENLGEDIKSEILEVIA 180
           NVVKQFVLPICDDIMAVDWVADAL+GP+V  PGSALR+TFLKLKENLG+++K +ILEVIA
Sbjct: 121 NVVKQFVLPICDDIMAVDWVADALQGPLVPSPGSALRVTFLKLKENLGDEVKGQILEVIA 180

Query: 181 GLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQKEKVREY 240
           G+REKLGPNVQLTVG+NFSPARAKGFSIASIAIFPGPNELEAAASD+EMVELQKEKVRE+
Sbjct: 181 GMREKLGPNVQLTVGDNFSPARAKGFSIASIAIFPGPNELEAAASDKEMVELQKEKVREH 240

Query: 241 LESVIVLDYVVPPPQTASL 260
           LESVIV+DYVVPPP+TASL
Sbjct: 241 LESVIVVDYVVPPPKTASL 257

[Close]

BLAST of Lsi11G001620 vs. NCBI nr
Match: XP_023521400.1 (stress-response A/B barrel domain-containing protein UP3-like [Cucurbita pepo subsp. pepo] >XP_023546924.1 stress-response A/B barrel domain-containing protein UP3-like [Cucurbita pepo subsp. pepo] >KAG6599531.1 Stress-response A/B barrel domain-containing protein UP3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030509.1 Stress-response A/B barrel domain-containing protein UP3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 411.4 bits (1056), Expect = 5.9e-111
Identity = 216/259 (83.40%), Postives = 234/259 (90.35%), Query Frame = 0


Query: 1   MLSSSLRTFSTLSSTSRHLRLRRPNPSLSFRPFSVNMSAAHTQPIEHVVLFKVKDGLDSS 60
           MLS +LRT STL S+SRHLRL RPN   SFRPFSVNMS  HT PIEHVVLFKVKDG+DSS
Sbjct: 1   MLSLALRTISTLPSSSRHLRL-RPNHRPSFRPFSVNMS-THTPPIEHVVLFKVKDGVDSS 60

Query: 61  KVNDILTGLNGLISLDQVLHLTAGPILRNRSSSFTFTHLLHSRYPSKEDLSIYSAHPAHM 120
           KVND+LTGLN L SL+QVLHLTA P+LRN SS+  FTHLLHSRYPSKEDLS YSAH AH+
Sbjct: 61  KVNDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHV 120

Query: 121 NVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTFLKLKENLGEDIKSEILEVIA 180
           +VVKQFVLPICDDIMAVDWVADAL+GPV APPGSALR+TFLKLKENL E++K+EILEVIA
Sbjct: 121 DVVKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIA 180

Query: 181 GLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQKEKVREY 240
           GLREKLGPNVQLTVGENFSP RAKG+SIASIAIFPGP ELEAA+SD EMVEL KEKVRE+
Sbjct: 181 GLREKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREH 240

Query: 241 LESVIVLDYVVPPPQTASL 260
           LESVIV+DYVVPP QTASL
Sbjct: 241 LESVIVVDYVVPPAQTASL 257

[Close]

BLAST of Lsi11G001620 vs. NCBI nr
Match: XP_022946739.1 (stress-response A/B barrel domain-containing protein UP3-like [Cucurbita moschata])

HSP 1 Score: 409.1 bits (1050), Expect = 2.9e-110
Identity = 215/259 (83.01%), Postives = 233/259 (89.96%), Query Frame = 0


Query: 1   MLSSSLRTFSTLSSTSRHLRLRRPNPSLSFRPFSVNMSAAHTQPIEHVVLFKVKDGLDSS 60
           MLS +LRT S L S+SRHLRL RPN   SFRPFSVNMS  HT PIEHVVLFKVKDG+DSS
Sbjct: 1   MLSLALRTISMLPSSSRHLRL-RPNHRPSFRPFSVNMS-THTTPIEHVVLFKVKDGVDSS 60

Query: 61  KVNDILTGLNGLISLDQVLHLTAGPILRNRSSSFTFTHLLHSRYPSKEDLSIYSAHPAHM 120
           KVND+LTGLN L SL+QVLHLTA P+LRN SS+  FTHLLHSRYPSKEDLS YSAH AH+
Sbjct: 61  KVNDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHV 120

Query: 121 NVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTFLKLKENLGEDIKSEILEVIA 180
           +VVKQFVLPICDDIMAVDWVADAL+GPV APPGSALR+TFLKLKENL E++K+EILEVIA
Sbjct: 121 DVVKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIA 180

Query: 181 GLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQKEKVREY 240
           GLREKLGPNVQLTVGENFSP RAKG+SIASIAIFPGP ELEAA+SD EMVEL KEKVRE+
Sbjct: 181 GLREKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREH 240

Query: 241 LESVIVLDYVVPPPQTASL 260
           LESVIV+DYVVPP QTASL
Sbjct: 241 LESVIVVDYVVPPAQTASL 257

[Close]

BLAST of Lsi11G001620 vs. TAIR 10
Match: AT2G31670.1 (Stress responsive alpha-beta barrel domain protein )

HSP 1 Score: 245.0 bits (624), Expect = 6.8e-65
Identity = 139/260 (53.46%), Postives = 179/260 (68.85%), Query Frame = 0


Query: 1   MLSSSLR-TFSTLSSTSRHLRLRRPNPSLSFRPFSV-NMSAAHTQPIEHVVLFKVKDGLD 60
           ++SS L  T ST   +  +LRL      L  R FSV + S   +Q IEH+VLFK KD  D
Sbjct: 9   LISSPLAFTISTTKHSRINLRL------LPRRSFSVMSSSTPQSQIIEHIVLFKTKDDAD 68

Query: 61  SSKVNDILTGLNGLISLDQVLHLTAGPILRNRSSSFTFTHLLHSRYPSKEDLSIYSAHPA 120
           S+K+  ++  LN L  LDQVLH++  P L   SS+  FTH+LHSRY SKEDL+ Y+AHP 
Sbjct: 69  STKITSMINNLNALAYLDQVLHISTSP-LHRISSATAFTHVLHSRYESKEDLASYAAHPD 128

Query: 121 HMNVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTFLKLKENLGEDIKSEILEV 180
           H+ VVK+ VLPICDDIMAVDW+AD + G V   PGS  +LT LKLKE++ ++ KSEI  V
Sbjct: 129 HVRVVKESVLPICDDIMAVDWIADRIPGTVAPLPGSVAKLTLLKLKEDVADEAKSEITGV 188

Query: 181 IAGLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAASDQEMVELQKEKVR 240
           I GL EK     Q+TVGENFSPARAKGFSIASIA F   +E+EA  + +E+V  QK+KVR
Sbjct: 189 IKGLSEKFPGIDQITVGENFSPARAKGFSIASIAYFKDLSEMEAVDAQKELVNSQKDKVR 248

Query: 241 EYLESVIVLDYVVPPPQTAS 259
           +Y++S IV+++VVP    +S
Sbjct: 249 DYVDSTIVVEFVVPSSSQSS 261

[Close]

BLAST of Lsi11G001620 vs. TAIR 10
Match: AT1G51360.1 (dimeric A/B barrel domainS-protein 1 )

HSP 1 Score: 180.3 bits (456), Expect = 2.0e-45
Identity = 101/210 (48.10%), Postives = 144/210 (68.57%), Query Frame = 0


Query: 45  IEHVVLFKVK-DGLDSSKVNDILTGLNGLISLDQVLHLTAGPILR-NRSSSFTFTHLLHS 104
           +EHVVLFK+  D +DS K+N ++ G+N L++LDQVLHL  G I R   +++  FTH+LHS
Sbjct: 5   VEHVVLFKLNDDDVDSGKINSMVNGINELVNLDQVLHLYCGSIHRLITTTASDFTHVLHS 64

Query: 105 RYPSKEDLSIYSAHPAHMNVVKQFVLPICDDIMAVDWVADALKGPVVAPPGSALRLTFLK 164
           RY SKEDL+ Y+ HP H+ VVK+    I +DIMAVDW+A+     +  P GS  ++T LK
Sbjct: 65  RYRSKEDLNAYAIHPDHVRVVKESE-SIREDIMAVDWIAEQAPEALAPPLGSIGKITLLK 124

Query: 165 LKENLGEDIKSEILEVIAGLREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEA 224
           LKEN+ E+ K EI+EV   ++EK     Q+TVGENFSP R+K FSI SI+ F    E+EA
Sbjct: 125 LKENVMEEAKLEIMEV---MKEKFEGIDQITVGENFSPGRSKDFSIGSISYFRDLGEIEA 184

Query: 225 AASDQEMVELQKEKVREYLESVIVLDYVVP 253
                + ++LQ +K+R+Y++  IV+++ VP
Sbjct: 185 V---DDQMKLQNDKIRDYVDDTIVVEFNVP 207

[Close]

BLAST of Lsi11G001620 vs. TAIR 10
Match: AT3G17210.1 (heat stable protein 1 )

HSP 1 Score: 52.8 bits (125), Expect = 4.9e-07
Identity = 29/99 (29.29%), Postives = 51/99 (51.52%), Query Frame = 0


Query: 44  PIEHVVLFKVKDGLDSSKVNDILTGLNGLISLDQ---VLHLTAGPILRNRSSSFTFTHLL 103
           P++HV+L   KDG+   K+ +++ G   L++L +     H      + N      +TH+ 
Sbjct: 7   PVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQG--YTHIF 66

Query: 104 HSRYPSKEDLSIYSAHPAHMNVVKQFVLPICDDIMAVDW 140
            S + SKE ++ Y AHPAH+     F L   D ++ +D+
Sbjct: 67  ESTFESKEAVAEYIAHPAHVEFATIF-LGSLDKVLVIDY 102

The following BLAST results are available for this feature:

BLAST of Lsi11G001620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIP1	9.5e-64	53.46	Stress-response A/B barrel domain-containing protein UP3 OS=Arabidopsis thaliana...	[more]
Q9SYD8	2.9e-44	48.10	Stress-response A/B barrel domain-containing protein DABB1 OS=Arabidopsis thalia...	[more]
Q9LUV2	6.9e-06	29.29	Stress-response A/B barrel domain-containing protein HS1 OS=Arabidopsis thaliana...	[more]

BLAST of Lsi11G001620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LET1	1.1e-118	87.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000190 PE=4 SV=1	[more]
A0A5D3CI21	7.7e-117	86.87	Stress-response A/B barrel domain-containing protein UP3 OS=Cucumis melo var. ma...	[more]
A0A1S3CBB4	7.7e-117	86.87	stress-response A/B barrel domain-containing protein UP3 OS=Cucumis melo OX=3656...	[more]
A0A6J1G4Q8	1.4e-110	83.01	stress-response A/B barrel domain-containing protein UP3-like OS=Cucurbita mosch...	[more]
A0A6J1KGF6	1.2e-109	82.24	stress-response A/B barrel domain-containing protein UP3-like OS=Cucurbita maxim...	[more]

BLAST of Lsi11G001620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889133.1	3.9e-123	92.28	stress-response A/B barrel domain-containing protein UP3 [Benincasa hispida]	[more]
XP_011648585.1	2.2e-118	87.26	stress-response A/B barrel domain-containing protein UP3 [Cucumis sativus] >KGN6...	[more]
XP_008459729.1	1.6e-116	86.87	PREDICTED: stress-response A/B barrel domain-containing protein UP3 [Cucumis mel...	[more]
XP_023521400.1	5.9e-111	83.40	stress-response A/B barrel domain-containing protein UP3-like [Cucurbita pepo su...	[more]
XP_022946739.1	2.9e-110	83.01	stress-response A/B barrel domain-containing protein UP3-like [Cucurbita moschat...	[more]

BLAST of Lsi11G001620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31670.1	6.8e-65	53.46	Stress responsive alpha-beta barrel domain protein	[more]
AT1G51360.1	2.0e-45	48.10	dimeric A/B barrel domainS-protein 1	[more]
AT3G17210.1	4.9e-07	29.29	heat stable protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013097	Stress responsive alpha-beta barrel	SMART	SM00886	Dabb_2	coord: 45..141 e-value: 1.7E-18 score: 77.4 coord: 155..251 e-value: 0.02 score: 18.5
IPR013097	Stress responsive alpha-beta barrel	PFAM	PF07876	Dabb	coord: 157..251 e-value: 2.0E-10 score: 41.1 coord: 45..140 e-value: 1.0E-18 score: 67.8
IPR013097	Stress responsive alpha-beta barrel	PROSITE	PS51502	S_R_A_B_BARREL	coord: 155..249 score: 17.497171
IPR013097	Stress responsive alpha-beta barrel	PROSITE	PS51502	S_R_A_B_BARREL	coord: 45..139 score: 24.068748
None	No IPR available	GENE3D	3.30.70.100		coord: 153..251 e-value: 9.2E-10 score: 40.8 coord: 36..144 e-value: 7.2E-22 score: 79.8
None	No IPR available	PANTHER	PTHR33178:SF3	STRESS-RESPONSE A/B BARREL DOMAIN-CONTAINING PROTEIN UP3	coord: 36..259
IPR044662	Stress-response A/B barrel domain-containing protein HS1/DABB1-like	PANTHER	PTHR33178	FAMILY NOT NAMED	coord: 36..259
IPR011008	Dimeric alpha-beta barrel	SUPERFAMILY	54909	Dimeric alpha+beta barrel	coord: 43..146
IPR011008	Dimeric alpha-beta barrel	SUPERFAMILY	54909	Dimeric alpha+beta barrel	coord: 155..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G001620.1	Lsi11G001620.1	mRNA