
Lsi11G001170 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTAATAACACACTTGAACAACAACAATAATTACCTTCCTCTTGCTCCTTCTTCTTCCACTTCTCTCTCCAAAAGAAACCTTCGTTATCTTTTGTCTTTCTATATATGTATATGTGTATTTGTGTATATATGTACATTGACGTACTGTAACATATGGAGTGGAATGTTGTCTTGTTGCCTTGTTAATCATTTGGTTTCCCTTCGTAAATGAATGATGATACGATCAAGAACCGAACCCAGCCATTCTATTTTTATGTAAATTCTTCTATGTTGTATTTGAAGCAGCCTAGCGTCTTTCTTGGGGTTGATTTAAGGTGTCGTCGTGGTTTCTCGGTTCTGGCTGTATATGATTATTATTTGATTTGATTTGATTTCATATCATATCCTTTTTCTTTTCCTCTTCAATTCAATTCAATTCTGTGATTTGCATGCCCTTCTCCTAGTTTCCCTGAGCCTGGGCCTGTGGTGCGAGGCTCGGGGGATCTGTAGAACATTTTTTTTGCCTAAAAAAATGGCTTCCTTAGAGACTGACCCCTTCTTCTCCTCCAATCCCACCGCATCCTCTGAGAATAACTCATTCTCCACCTTTCCTCTCCCATCCTTGGAAAATGATGCCTACTCCAACTCTGCCGCATCTTCTGATGAGCTTCGGTCTGCCTCTTCTGCTTGTATGCACAAATTCAGGCTCTATGAGACTCGATCGGTAACTACACTTTCTTTCCAATTCTATTTTTACATACCCATTTGGCCATATCCCATCATTTTGTTTCCGTTTCTTTTTGTTCAATTGTACTCTTTTTTCCTTTACTCTCTTACCTTTCGTCTCTCCTTGGTTGTGCTCCTAGAAAGTAACTTTGTAATGTGCTGTATGTTTTTGACATGCTAATTCATACGGTTGCTATTACAGCCTATGGCTTTCTTACATGCGTCTTCTGTTTGCTGTTGTGTAACTTCTAGCTACCCAGATATTCACCCATTCCCTAAATATACTACTATGCAGGCTAATAGTGTTGAGAGAATTTTCTTCTGTAGTAACGTTTCTATGGTTTTGCACATCAACTTGCCATGATTCTGTTATTTATGTGATCTTATGTTATTAAGACAAGTTTTTTGCGGTGGCATTTATAGATAAATTCCTATCTATTTTATTTTTCTTCCTTCCCTCTAAACAGATTCTTTCTTCTGTAGACTGTAGAATCTTGGTTTAGTAAAGGTTGAAGAAACGTTATGTTGGCGATGTATGTCACTTCTTGATGTGGTTGTCGAACTGTATTTATGTATTTGTAGTATTCCTATTTATGATTCTTTTCTTGGTTCTAGAAATTTTACATGGTAGGAAGGGACAAGAGTAGAACATATTGGAGAGTGCTCAAAATTGATAGGATGGATTTGTCTGAGCTAAGCATACGCGAAGATTCTGCTGTATATACAGAAAGTGAATGTTCTGATCTGTTGAGACGCATACATGAGGGTAATAAATCTACTGGCGGACTGAAGTTCGTGACCACTTGTTATGGTATTGTTGGTAAGCCAAATCTTATCTTAAGGTTTTAA ATTAATAACACACTTGAACAACAACAATAATTACCTTCCTCTTGCTCCTTCTTCTTCCACTTCTCTCTCCAAAAGAAACCTTCGTTATCTTTTGTCTTTCTATATATGTATATGTGTATTTGTGTATATATGTACATTGACGTACTGTAACATATGGAGTGGAATGTTGTCTTGTTGCCTTGTTAATCATTTGGTTTCCCTTCGTAAATGAATGATGATACGATCAAGAACCGAACCCAGCCATTCTATTTTTATGTAAATTCTTCTATGTTGTATTTGAAGCAGCCTAGCGTCTTTCTTGGGGTTGATTTAAGGTGTCGTCGTGGTTTCTCGGTTCTGGCTGTATATGATTATTATTTGATTTGATTTGATTTCATATCATATCCTTTTTCTTTTCCTCTTCAATTCAATTCAATTCTGTGATTTGCATGCCCTTCTCCTAGTTTCCCTGAGCCTGGGCCTGTGGTGCGAGGCTCGGGGGATCTGTAGAACATTTTTTTTGCCTAAAAAAATGGCTTCCTTAGAGACTGACCCCTTCTTCTCCTCCAATCCCACCGCATCCTCTGAGAATAACTCATTCTCCACCTTTCCTCTCCCATCCTTGGAAAATGATGCCTACTCCAACTCTGCCGCATCTTCTGATGAGCTTCGGTCTGCCTCTTCTGCTTGTATGCACAAATTCAGGCTCTATGAGACTCGATCGAAATTTTACATGGTAGGAAGGGACAAGAGTAGAACATATTGGAGAGTGCTCAAAATTGATAGGATGGATTTGTCTGAGCTAAGCATACGCGAAGATTCTGCTGTATATACAGAAAGTGAATGTTCTGATCTGTTGAGACGCATACATGAGGGTAATAAATCTACTGGCGGACTGAAGTTCGTGACCACTTGTTATGGTATTGTTGGTAAGCCAAATCTTATCTTAAGGTTTTAA ATGGCTTCCTTAGAGACTGACCCCTTCTTCTCCTCCAATCCCACCGCATCCTCTGAGAATAACTCATTCTCCACCTTTCCTCTCCCATCCTTGGAAAATGATGCCTACTCCAACTCTGCCGCATCTTCTGATGAGCTTCGGTCTGCCTCTTCTGCTTGTATGCACAAATTCAGGCTCTATGAGACTCGATCGAAATTTTACATGGTAGGAAGGGACAAGAGTAGAACATATTGGAGAGTGCTCAAAATTGATAGGATGGATTTGTCTGAGCTAAGCATACGCGAAGATTCTGCTGTATATACAGAAAGTGAATGTTCTGATCTGTTGAGACGCATACATGAGGGTAATAAATCTACTGGCGGACTGAAGTTCGTGACCACTTGTTATGGTATTGTTGGTAAGCCAAATCTTATCTTAAGGTTTTAA MASLETDPFFSSNPTASSENNSFSTFPLPSLENDAYSNSAASSDELRSASSACMHKFRLYETRSKFYMVGRDKSRTYWRVLKIDRMDLSELSIREDSAVYTESECSDLLRRIHEGNKSTGGLKFVTTCYGIVGKPNLILRF Homology
BLAST of Lsi11G001170 vs. ExPASy Swiss-Prot
Match: Q94A27 (Phosphoinositide phosphatase SAC2 OS=Arabidopsis thaliana OX=3702 GN=SAC2 PE=2 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 3.2e-29 Identity = 61/95 (64.21%), Postives = 76/95 (80.00%), Query Frame = 0
BLAST of Lsi11G001170 vs. ExPASy Swiss-Prot
Match: Q7XZU1 (Phosphoinositide phosphatase SAC4 OS=Arabidopsis thaliana OX=3702 GN=SAC4 PE=2 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.1e-24 Identity = 57/105 (54.29%), Postives = 77/105 (73.33%), Query Frame = 0
BLAST of Lsi11G001170 vs. ExPASy Swiss-Prot
Match: Q7XZU2 (Phosphoinositide phosphatase SAC3 OS=Arabidopsis thaliana OX=3702 GN=SAC3 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 9.9e-23 Identity = 53/93 (56.99%), Postives = 71/93 (76.34%), Query Frame = 0
BLAST of Lsi11G001170 vs. ExPASy Swiss-Prot
Match: Q7XZU3 (Phosphatidylinositol-3-phosphatase SAC1 OS=Arabidopsis thaliana OX=3702 GN=SAC1 PE=1 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 5.4e-21 Identity = 58/118 (49.15%), Postives = 78/118 (66.10%), Query Frame = 0
BLAST of Lsi11G001170 vs. ExPASy Swiss-Prot
Match: Q8RW97 (Phosphoinositide phosphatase SAC5 OS=Arabidopsis thaliana OX=3702 GN=SAC5 PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 5.6e-18 Identity = 40/80 (50.00%), Postives = 60/80 (75.00%), Query Frame = 0
BLAST of Lsi11G001170 vs. ExPASy TrEMBL
Match: A0A6J1FFQ8 (phosphoinositide phosphatase SAC3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443619 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 6.6e-62 Identity = 125/133 (93.98%), Postives = 129/133 (96.99%), Query Frame = 0
BLAST of Lsi11G001170 vs. ExPASy TrEMBL
Match: A0A6J1F9Z7 (phosphoinositide phosphatase SAC4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443619 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 6.6e-62 Identity = 125/133 (93.98%), Postives = 129/133 (96.99%), Query Frame = 0
BLAST of Lsi11G001170 vs. ExPASy TrEMBL
Match: A0A6J1I326 (phosphoinositide phosphatase SAC4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470096 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 7.3e-61 Identity = 123/133 (92.48%), Postives = 128/133 (96.24%), Query Frame = 0
BLAST of Lsi11G001170 vs. ExPASy TrEMBL
Match: A0A6J1I5G6 (phosphoinositide phosphatase SAC3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470096 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 7.3e-61 Identity = 123/133 (92.48%), Postives = 128/133 (96.24%), Query Frame = 0
BLAST of Lsi11G001170 vs. ExPASy TrEMBL
Match: A0A0A0KUN1 (SAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G538050 PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.6e-60 Identity = 122/133 (91.73%), Postives = 127/133 (95.49%), Query Frame = 0
BLAST of Lsi11G001170 vs. NCBI nr
Match: XP_023539219.1 (phosphoinositide phosphatase SAC4-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 246.9 bits (629), Expect = 1.0e-61 Identity = 125/133 (93.98%), Postives = 129/133 (96.99%), Query Frame = 0
BLAST of Lsi11G001170 vs. NCBI nr
Match: XP_023539218.1 (phosphoinositide phosphatase SAC3-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 246.9 bits (629), Expect = 1.0e-61 Identity = 125/133 (93.98%), Postives = 129/133 (96.99%), Query Frame = 0
BLAST of Lsi11G001170 vs. NCBI nr
Match: XP_022937301.1 (phosphoinositide phosphatase SAC4-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 246.5 bits (628), Expect = 1.4e-61 Identity = 125/133 (93.98%), Postives = 129/133 (96.99%), Query Frame = 0
BLAST of Lsi11G001170 vs. NCBI nr
Match: XP_022937293.1 (phosphoinositide phosphatase SAC3-like isoform X1 [Cucurbita moschata] >KAG6596155.1 Phosphoinositide phosphatase SAC3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027700.1 Phosphoinositide phosphatase SAC3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 246.5 bits (628), Expect = 1.4e-61 Identity = 125/133 (93.98%), Postives = 129/133 (96.99%), Query Frame = 0
BLAST of Lsi11G001170 vs. NCBI nr
Match: XP_022971340.1 (phosphoinositide phosphatase SAC3-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 243.0 bits (619), Expect = 1.5e-60 Identity = 123/133 (92.48%), Postives = 128/133 (96.24%), Query Frame = 0
BLAST of Lsi11G001170 vs. TAIR 10
Match: AT3G14205.1 (Phosphoinositide phosphatase family protein ) HSP 1 Score: 129.4 bits (324), Expect = 2.3e-30 Identity = 61/95 (64.21%), Postives = 76/95 (80.00%), Query Frame = 0
BLAST of Lsi11G001170 vs. TAIR 10
Match: AT5G20840.1 (Phosphoinositide phosphatase family protein ) HSP 1 Score: 114.4 bits (285), Expect = 7.5e-26 Identity = 57/105 (54.29%), Postives = 77/105 (73.33%), Query Frame = 0
BLAST of Lsi11G001170 vs. TAIR 10
Match: AT3G43220.1 (Phosphoinositide phosphatase family protein ) HSP 1 Score: 107.8 bits (268), Expect = 7.0e-24 Identity = 53/93 (56.99%), Postives = 71/93 (76.34%), Query Frame = 0
BLAST of Lsi11G001170 vs. TAIR 10
Match: AT3G43220.2 (Phosphoinositide phosphatase family protein ) HSP 1 Score: 107.8 bits (268), Expect = 7.0e-24 Identity = 53/93 (56.99%), Postives = 71/93 (76.34%), Query Frame = 0
BLAST of Lsi11G001170 vs. TAIR 10
Match: AT1G22620.1 (Phosphoinositide phosphatase family protein ) HSP 1 Score: 102.1 bits (253), Expect = 3.9e-22 Identity = 58/118 (49.15%), Postives = 78/118 (66.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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