Lsi11G000330 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G000330
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Location	chr11: 350516 .. 352277 (-)
RNA-Seq Expression	Lsi11G000330
Synteny	Lsi11G000330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCAGTATAATGCATCCATCCATAAGCCTTTTCCCAAACTCAAAATTCTACTCAGGCCTGATCTCAGATGGTCCTAATGTCAAAGCCAAAGCCTATAAGAAGACGTTTCTTCCCGGACCGATGTTCGGTTCGTATTCTTTCATAAGCATAAATGGTGGAAGAGAAGAGAAAGATAAGATTGGACACAGTTGGAAAAACATGGTAGAGGTTGATGCTGTGCTCAAAATTGTTCATTCTTTGTCCCAAGGTAGTAATTATTTTTCTATCTTTGTTTTTGGTTTCGTTCTTTAGCTATTTTGTTCGAATATGTTCTTCCTTGAGAAACATGGACACTTTAATTTAGCTAACGTGATTGTATTTGACATGTGTTTGATACTAGTTAGTGCAATAGACATGTTCGACACTATTTGTACAAAGTCAAAATATAAGACTAAACTTTGTTAGACATGCATCATTATGTGCATTGTCATGTCCACGATATTTCATATCCATGTATCTCGCGTATTTGTATCTGTGCTTCATTGATGTTTTTGGTCATCTAATTGCTTTTTTTTTTAATAATATATGTTGTGTAGTATGTGTTCGCTCGAAAGAAAAGATCAGCATTGGTGTAGTGTCTCCTTATTCAGCACAAGTTGTTACCATTCAACATAAAATTGGGAGGAAGTACAATTCTAATGGATTTAATGTCAAAGTGAGCTCAGTTGATGGTTTTCAGGGTGGGGAGGAAGATATCATTATTATTTCCACTGTTCGACCAAATAGAGGATCGTCGATCGGGTTCTTGTCGAGTAATCAAAGAACAAATGTCGCCCTTACAAGAGCTAGGTAACAAACTTCATATACTATCCTTTTTGTTCTAACTCTACTCTTGATAGGTTCTATCAATTTTAACCCTAACCTAGTTTGAGGTTAGGGTTAAAATTGATACAACCGATCAAATTTAGGGTCAACGATGATACTTCCCAAATTCTTAAATGAAAGTTTTGACAAGTAACATTTCTTTTTTAGAACATTAATATGCTTGGTCTGAGAACTCATCAATTTGCTAAAGATTTCTTTGTTCAAAAGTTATATGTCACCTCTATTTGATAATCATTTGATTTTTTAAAATTATATATATTTGTATTCTCGTAATTACAATGGTTTTGAAAACATTTAGATTCTTATCCAAATTCAAAAAACAAAAACAAGTTTTTAAAAACATTTATTTTTTTTAGTTTTCAAAACTTTAGTTTTACTTAATTTTGAAAACATCTCTTAAAAAATAAAATACAGATGGAAGCAAATGCTTAAAAAAAAGACTAGAATTGTTATACTAACCTATTTAAATGGCAATAGATACTGTTTGTGGATATTGGGGAACTTCAAAACACTCTCAAAGAGTAACCCAGTTTGGGAAGAGTTGGTTATTGATGCCAAAAATCGTGGCTGCTTCTTCAAAGCTGATGCCAATGCCATATTCAAAGACGTCGAACGGTTCATTCCGCTACTGGATTACGAGCCAAATGTCGATATTGACGGAGGAGAATGTCGTATTCGGACAATTGAAGCAATTGAAGACAACAAAAAAGAAGAAGAAAAATGCAAAGGAATAAGCTTGGAGATTATGGAGGGAAAGAATATAGTAGAAGAAGCTCAAGACTCCAAGGCTGTTACTAGTTTTTTTAGGCATACAAATTGGCTCATGGTTAAGATCAAGAAGTTCATTGTTCATTGTATCTCTCGATTCATGGGAAAGCTATTGGGAGGAATTTAG

mRNA sequence

ATGTGCAGTATAATGCATCCATCCATAAGCCTTTTCCCAAACTCAAAATTCTACTCAGGCCTGATCTCAGATGGTCCTAATGTCAAAGCCAAAGCCTATAAGAAGACGTTTCTTCCCGGACCGATGTTCGGTTCGTATTCTTTCATAAGCATAAATGGTGGAAGAGAAGAGAAAGATAAGATTGGACACAGTTGGAAAAACATGGTAGAGGTTGATGCTGTGCTCAAAATTGTTCATTCTTTGTCCCAAGTATGTGTTCGCTCGAAAGAAAAGATCAGCATTGGTGTAGTGTCTCCTTATTCAGCACAAGTTGTTACCATTCAACATAAAATTGGGAGGAAGTACAATTCTAATGGATTTAATGTCAAAGTGAGCTCAGTTGATGGTTTTCAGGGTGGGGAGGAAGATATCATTATTATTTCCACTGTTCGACCAAATAGAGGATCGTCGATCGGGTTCTTGTCGAGTAATCAAAGAACAAATGTCGCCCTTACAAGAGCTAGATACTGTTTGTGGATATTGGGGAACTTCAAAACACTCTCAAAGAGTAACCCAGTTTGGGAAGAGTTGGTTATTGATGCCAAAAATCGTGGCTGCTTCTTCAAAGCTGATGCCAATGCCATATTCAAAGACGTCGAACGGTTCATTCCGCTACTGGATTACGAGCCAAATGTCGATATTGACGGAGGAGAATGTCGTATTCGGACAATTGAAGCAATTGAAGACAACAAAAAAGAAGAAGAAAAATGCAAAGGAATAAGCTTGGAGATTATGGAGGGAAAGAATATAGTAGAAGAAGCTCAAGACTCCAAGGCTGTTACTAGTTTTTTTAGGCATACAAATTGGCTCATGGTTAAGATCAAGAAGTTCATTGTTCATTGTATCTCTCGATTCATGGGAAAGCTATTGGGAGGAATTTAG

Coding sequence (CDS)

ATGTGCAGTATAATGCATCCATCCATAAGCCTTTTCCCAAACTCAAAATTCTACTCAGGCCTGATCTCAGATGGTCCTAATGTCAAAGCCAAAGCCTATAAGAAGACGTTTCTTCCCGGACCGATGTTCGGTTCGTATTCTTTCATAAGCATAAATGGTGGAAGAGAAGAGAAAGATAAGATTGGACACAGTTGGAAAAACATGGTAGAGGTTGATGCTGTGCTCAAAATTGTTCATTCTTTGTCCCAAGTATGTGTTCGCTCGAAAGAAAAGATCAGCATTGGTGTAGTGTCTCCTTATTCAGCACAAGTTGTTACCATTCAACATAAAATTGGGAGGAAGTACAATTCTAATGGATTTAATGTCAAAGTGAGCTCAGTTGATGGTTTTCAGGGTGGGGAGGAAGATATCATTATTATTTCCACTGTTCGACCAAATAGAGGATCGTCGATCGGGTTCTTGTCGAGTAATCAAAGAACAAATGTCGCCCTTACAAGAGCTAGATACTGTTTGTGGATATTGGGGAACTTCAAAACACTCTCAAAGAGTAACCCAGTTTGGGAAGAGTTGGTTATTGATGCCAAAAATCGTGGCTGCTTCTTCAAAGCTGATGCCAATGCCATATTCAAAGACGTCGAACGGTTCATTCCGCTACTGGATTACGAGCCAAATGTCGATATTGACGGAGGAGAATGTCGTATTCGGACAATTGAAGCAATTGAAGACAACAAAAAAGAAGAAGAAAAATGCAAAGGAATAAGCTTGGAGATTATGGAGGGAAAGAATATAGTAGAAGAAGCTCAAGACTCCAAGGCTGTTACTAGTTTTTTTAGGCATACAAATTGGCTCATGGTTAAGATCAAGAAGTTCATTGTTCATTGTATCTCTCGATTCATGGGAAAGCTATTGGGAGGAATTTAG

Protein sequence

MCSIMHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEKDKIGHSWKNMVEVDAVLKIVHSLSQVCVRSKEKISIGVVSPYSAQVVTIQHKIGRKYNSNGFNVKVSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTLSKSNPVWEELVIDAKNRGCFFKADANAIFKDVERFIPLLDYEPNVDIDGGECRIRTIEAIEDNKKEEEKCKGISLEIMEGKNIVEEAQDSKAVTSFFRHTNWLMVKIKKFIVHCISRFMGKLLGGI

Homology

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BLAST of Lsi11G000330 vs. ExPASy Swiss-Prot
Match: Q00416 (Helicase SEN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SEN1 PE=1 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 2.0e-28
Identity = 75/201 (37.31%), Postives = 120/201 (59.70%), Query Frame = 0


Query: 5    MHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEKDKIGHS 64
            MHPSIS FP+S+FY G + DGP +     +      P+   Y F  I  GR+E++    S
Sbjct: 1657 MHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQLEPL-APYKFFDIISGRQEQNAKTMS 1716

Query: 65   WKNMVEVDAVLKIVHSLSQVCVRSKEKI----SIGVVSPYSAQVVTIQHKIGRKYNSN-G 124
            + NM E+   +++V  L +   +   KI     IG++SPY  Q+  ++ +  R +     
Sbjct: 1717 YTNMEEIRVAIELVDYLFR---KFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGMIN 1776

Query: 125  FNVKVSSVDGFQGGEEDIIIISTVR-PNRGSSIGFLSSNQRTNVALTRARYCLWILGNFK 184
             ++  +++DGFQG E++II+IS VR  +  SS+GFL   +R NVALTRA+  +W+LG+ +
Sbjct: 1777 KSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQR 1836

Query: 185  TLSKSNPVWEELVIDAKNRGC 200
            +L+KS  +W +L+ DAK+R C
Sbjct: 1837 SLAKSK-LWRDLIEDAKDRSC 1852

[Close]

BLAST of Lsi11G000330 vs. ExPASy Swiss-Prot
Match: B6SFA4 (Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana OX=3702 GN=MAA3 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 9.9e-28
Identity = 71/200 (35.50%), Postives = 114/200 (57.00%), Query Frame = 0


Query: 5   MHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEKDK-IGH 64
           MHP I  FP+ +FY G + DG +++A+   + +     FG + F  I+ G+E +      
Sbjct: 558 MHPEIRSFPSKQFYEGALEDGSDIEAQT-TRDWHKYRCFGPFCFFDIHEGKESQHPGATG 617

Query: 65  SWKNMVEVDAVLKIVHSLSQVCVRSKEKISIGVVSPYSAQVVTIQHKIGRKYNSNGFN-V 124
           S  N+ EV+ VL I H L  +    K    + ++SPY+ QV T + +    + +     V
Sbjct: 618 SRVNLDEVEFVLLIYHRLVTMYPELKSSSQLAIISPYNYQVKTFKDRFKEMFGTEAEKVV 677

Query: 125 KVSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTLSK 184
            +++VDGFQG E+D+ I S VR N    IGFLS+++R NV +TRA+  + ++G+  TL K
Sbjct: 678 DINTVDGFQGREKDVAIFSCVRANENGQIGFLSNSRRMNVGITRAKSSVLVVGSAATL-K 737

Query: 185 SNPVWEELVIDAKNRGCFFK 203
           S+P+W+ L+  A+ R   FK
Sbjct: 738 SDPLWKNLIESAEQRNRLFK 755

[Close]

BLAST of Lsi11G000330 vs. ExPASy Swiss-Prot
Match: O94387 (Uncharacterized ATP-dependent helicase C29A10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC29A10.10c PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.8e-27
Identity = 78/203 (38.42%), Postives = 114/203 (56.16%), Query Frame = 0


Query: 5    MHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEKDKIGHS 64
            M+P IS FP+  FY+  + DGPN+ A    + +   P  G Y F +++G   E      S
Sbjct: 1585 MNPEISRFPSKFFYNSKLLDGPNMSA-VTSRPWHEDPQLGIYRFFNVHG--TEAFSNSKS 1644

Query: 65   WKNMVEVDAVLKIVHSLSQVCVRSKEKISIGVVSPYSAQVVTIQHKIGRKYNSNGF-NVK 124
              N+ E   +L +   L Q  +    +  IGVV+PY +QV  ++ +  RKY S  F ++ 
Sbjct: 1645 LYNVEEASFILLLYERLIQCYLNIDFEGKIGVVTPYRSQVQQLRSQFQRKYGSIIFKHLD 1704

Query: 125  VSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTLSKS 184
            + +VDGFQG E+DIII S VR +    IGFL   +R NVALTRA+  L+I+GN K L + 
Sbjct: 1705 IHTVDGFQGQEKDIIIFSCVRSSMSGGIGFLQDLRRLNVALTRAKSSLYIVGNSKPLMQE 1764

Query: 185  NPVWEELVIDAKNRGCFFKADAN 207
            + ++  L+ DAK RG +    AN
Sbjct: 1765 D-IFYSLIEDAKTRGVWRDLSAN 1783

[Close]

BLAST of Lsi11G000330 vs. ExPASy Swiss-Prot
Match: Q9FJR0 (Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana OX=3702 GN=UPF1 PE=1 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 4.2e-26
Identity = 76/214 (35.51%), Postives = 111/214 (51.87%), Query Frame = 0


Query: 5   MHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEKDKIGHS 64
           MHP++S FP++ FY G + +G  +  +       P P+     F  +  G+EE    G S
Sbjct: 724 MHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYVQLGQEEISASGTS 783

Query: 65  WKNMVEVDAVLKIVHSLSQVCVRSKEKISIGVVSPYSAQ---VVTIQHKIGRKYNSNGFN 124
           + N  E   V K+V +  +  V   +   IGV++PY  Q   +V    + G         
Sbjct: 784 YLNRTEAANVEKLVTAFLKSGVVPSQ---IGVITPYEGQRAYIVNYMARNGSLRQQLYKE 843

Query: 125 VKVSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTLS 184
           ++V+SVD FQG E+D II+S VR N    IGFL+  +R NVALTRARY + ILGN K LS
Sbjct: 844 IEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLS 903

Query: 185 KSNPVWEELVIDAKNRGCFFKADANAIFKDVERF 216
           K  P+W  L+   K   C  +   N + + + +F
Sbjct: 904 K-QPLWNGLLTHYKEHECLVEGPLNNLKQSMVQF 933

[Close]

BLAST of Lsi11G000330 vs. ExPASy Swiss-Prot
Match: Q9HEH1 (Regulator of nonsense transcripts 1 homolog OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=2E4.130 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.1e-26
Identity = 74/198 (37.37%), Postives = 104/198 (52.53%), Query Frame = 0


Query: 5   MHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEKDKIGHS 64
           MHP +S FP++ FY G + +G     +  K    P P+  +      N G EE    G S
Sbjct: 689 MHPCLSEFPSNMFYEGSLQNGVTAAERLRKDVDFPWPVPETPMMFWSNLGNEEISASGTS 748

Query: 65  WKNMVEVDAVLKIVHSLSQVCVRSKEKISIGVVSPYSAQ---VVTIQHKIGRKYNSNGFN 124
           + N  E   V KIV    +  V+  +   IGV++PY  Q   +V      G     +   
Sbjct: 749 YLNRTEAANVEKIVTRFFKAGVKPAD---IGVITPYEGQRSYIVNTMQNTGTFKKESYRE 808

Query: 125 VKVSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTLS 184
           V+V+SVD FQG E+D I++S VR N    IGFLS  +R NVALTRA+Y L I+GN K L 
Sbjct: 809 VEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTRAKYGLVIIGNPKVLC 868

Query: 185 KSNPVWEELVIDAKNRGC 200
           K + +W  L++  K++ C
Sbjct: 869 K-HELWHHLLVHFKDKKC 882

[Close]

BLAST of Lsi11G000330 vs. ExPASy TrEMBL
Match: A0A6J1CTS8 (LOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like OS=Momordica charantia OX=3673 GN=LOC111014153 PE=3 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 1.3e-91
Identity = 187/262 (71.37%), Postives = 200/262 (76.34%), Query Frame = 0


Query: 5   MHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEK-DKIGH 64
           MHPSISLFPNSKFYS  ISDGPNVKAK Y K+FLPGPMFGSYSFI IN GREEK D +GH
Sbjct: 381 MHPSISLFPNSKFYSNQISDGPNVKAKDYTKSFLPGPMFGSYSFIDINHGREEKRDGMGH 440

Query: 65  SWKNMVEVDAVLKIVHSLSQVCVRSKEKISIGVVSPYSAQVVTIQHKIGRKYNS-NGFNV 124
           SW+NM EV  VLKI+H+LS+ CVRSKEKISIGVVSPYSAQV  IQHK+GRKYN+  GF V
Sbjct: 441 SWRNMAEVHIVLKILHTLSKACVRSKEKISIGVVSPYSAQVAAIQHKVGRKYNNCGGFTV 500

Query: 125 KVSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTLSK 184
           KVSSVDGFQGGEEDIIIISTVR N GSSIGFLSSNQR NVALTRARYCLWILGNF  LSK
Sbjct: 501 KVSSVDGFQGGEEDIIIISTVRSNSGSSIGFLSSNQRANVALTRARYCLWILGNFNALSK 560

Query: 185 SNPVWEELVIDAKNRGCFFKADANAIFKDVERFIPLLD-------------------YEP 244
           SN V EELVIDAKNRGCFF+AD  AI + V+   P                       E 
Sbjct: 561 SNSVXEELVIDAKNRGCFFRAD--AILEHVKCSAPSSGPDSESILGNFNTLSKSNSVCES 620

Query: 245 NVDIDGGECRIRTIEAIEDNKK 246
           NVDIDGGEC  + I    D+KK
Sbjct: 621 NVDIDGGECFDQAIVVDGDDKK 640

[Close]

BLAST of Lsi11G000330 vs. ExPASy TrEMBL
Match: A0A1S3CEY4 (uncharacterized protein LOC103500100 OS=Cucumis melo OX=3656 GN=LOC103500100 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 8.0e-81
Identity = 156/203 (76.85%), Postives = 167/203 (82.27%), Query Frame = 0


Query: 5   MHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEKDKIGHS 64
           MHPSIS FPNSKFYS  ISDGPNVK + Y K FL GPMFGSYSF+ IN GREEKD I  S
Sbjct: 616 MHPSISCFPNSKFYSNQISDGPNVKTEGYVKKFLNGPMFGSYSFMDINEGREEKDGITQS 675

Query: 65  WKNMVEVDAVLKIVHSL---SQVCVRSKEKISIGVVSPYSAQVVTIQHKIGRKY-NSNGF 124
           WKNM EVD VL+I+H L   +  CV S EKISIGVVSPYSAQV  I+HK+GR Y NSN F
Sbjct: 676 WKNMAEVDVVLQIIHKLYNKATTCVDSNEKISIGVVSPYSAQVAAIEHKLGRNYNNSNSF 735

Query: 125 NVKVSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTL 184
            V+VSSVDGFQGGEEDIIIISTVR NR SSIGFLSSNQRTNVALTRARYCLWILGNF TL
Sbjct: 736 KVRVSSVDGFQGGEEDIIIISTVRSNRSSSIGFLSSNQRTNVALTRARYCLWILGNFDTL 795

Query: 185 SKSNPVWEELVIDAKNRGCFFKA 204
           S S+ +WE+LV DAKNRGCFF A
Sbjct: 796 SNSDSIWEDLVFDAKNRGCFFNA 818

[Close]

BLAST of Lsi11G000330 vs. ExPASy TrEMBL
Match: A0A5D3CGE7 (Regulator of nonsense transcripts 1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5463G00100 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 5.2e-80
Identity = 160/228 (70.18%), Postives = 178/228 (78.07%), Query Frame = 0


Query: 5   MHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEKDKIGHS 64
           MHPSIS FPNSKFYS  ISDGPNVK + Y K FL GPMFGSYSF+ IN GREEKD I  S
Sbjct: 181 MHPSISCFPNSKFYSNQISDGPNVKTEGYVKKFLNGPMFGSYSFMDINEGREEKDGITQS 240

Query: 65  WKNMVEVDAVLKIVHSL---SQVCVRSKEKISIGVVSPYSAQVVTIQHKIGRKY-NSNGF 124
           WKNM EVD VL+I+H L   +  CV S EKISIGVVSPYSAQV  I++K+GR Y NSN F
Sbjct: 241 WKNMAEVDVVLQIIHKLYNKATTCVDSNEKISIGVVSPYSAQVAAIEYKLGRNYNNSNIF 300

Query: 125 NVKVSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTL 184
            V+VSSVDGFQGGEEDIIIISTVR NR SSIGFLSSNQRTNVALTRARYCLWILGNF TL
Sbjct: 301 KVRVSSVDGFQGGEEDIIIISTVRSNRSSSIGFLSSNQRTNVALTRARYCLWILGNFDTL 360

Query: 185 SKSNPVWEELVIDAKNRGCFFKADANAIFKDVERFIP--LLDYEPNVD 227
           S S+ +WE+LV DAKNRGCFF A  +   KD+   +    +D E ++D
Sbjct: 361 SNSDSIWEDLVFDAKNRGCFFNAKED---KDLANVMSSWKMDVEKSID 405

[Close]

BLAST of Lsi11G000330 vs. ExPASy TrEMBL
Match: A0A6J1CRP9 (uncharacterized protein LOC111014151 OS=Momordica charantia OX=3673 GN=LOC111014151 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.6e-73
Identity = 152/222 (68.47%), Postives = 169/222 (76.13%), Query Frame = 0


Query: 5   MHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEKDKIGHS 64
           MHPSISLFPNSKFY   I DGPNV++ +Y+K +L G MFG YSFI+I  GREEKD IGHS
Sbjct: 646 MHPSISLFPNSKFYYSQILDGPNVQSLSYRKNYLLGSMFGPYSFINIKYGREEKDDIGHS 705

Query: 65  WKNMVEVDAVLKIVHSLSQVCVRSKEKISIGVVSPYSAQVVTIQHKIGRKY-NSNGFNVK 124
            KNM+EV   LKIV +L +V   SKEK+SIGV+SPYSAQV TI+ KIG KY N +GF VK
Sbjct: 706 RKNMLEVAVALKIVRNLYKVWTSSKEKLSIGVISPYSAQVSTIKEKIGHKYDNLDGFKVK 765

Query: 125 VSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTLSKS 184
           V SVDGFQGGEEDIIIISTVR NRGSS+GFLS +QRTNVALTRARYCLWILGN KTLS S
Sbjct: 766 VKSVDGFQGGEEDIIIISTVRSNRGSSVGFLSCDQRTNVALTRARYCLWILGNDKTLSNS 825

Query: 185 NPVWEELVIDAKNRGCFFKAD-----ANAIFKDVERFIPLLD 221
              W  LV DAK RGCFF AD     A AI +  + F  L D
Sbjct: 826 ESSWAHLVSDAKQRGCFFNADDDESLAKAILEVKKEFNQLDD 867

[Close]

BLAST of Lsi11G000330 vs. ExPASy TrEMBL
Match: A0A5C7HIU5 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_017988 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 3.7e-70
Identity = 140/213 (65.73%), Postives = 165/213 (77.46%), Query Frame = 0


Query: 5    MHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEKDKIGHS 64
            MHPSIS FPNSKFY   I DGPNVK+K Y++ +LPG MFG YSFI+I GGREE D++GHS
Sbjct: 883  MHPSISFFPNSKFYHNQILDGPNVKSKCYEQCYLPGGMFGPYSFINILGGREELDEVGHS 942

Query: 65   WKNMVEVDAVLKIVHSLSQVCVRSKEKISIGVVSPYSAQVVTIQHKIGRKY-NSNGFNVK 124
             +NMVEV  V+ I+ +L +  +RSK+K+SIGVVSPY AQVV IQ ++G  Y N NGF +K
Sbjct: 943  RRNMVEVSVVMNILQNLFKAWIRSKKKLSIGVVSPYKAQVVAIQQQLGHMYENRNGFVIK 1002

Query: 125  VSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTLSKS 184
            V SVDGFQGGEEDIIIISTVR N G  IGFLS  +R NVALTRARYCLWILGN +TL++S
Sbjct: 1003 VKSVDGFQGGEEDIIIISTVRCNNGGYIGFLSDPKRVNVALTRARYCLWILGNERTLTRS 1062

Query: 185  NPVWEELVIDAKNRGCFFKADANAIFKDVERFI 217
              VWE LV DAK+R CFF AD +   KD+ R I
Sbjct: 1063 ASVWETLVRDAKDRQCFFNADED---KDLARAI 1092

[Close]

BLAST of Lsi11G000330 vs. NCBI nr
Match: XP_031737582.1 (uncharacterized ATP-dependent helicase C29A10.10c isoform X1 [Cucumis sativus])

HSP 1 Score: 381.3 bits (978), Expect = 7.7e-102
Identity = 201/270 (74.44%), Postives = 217/270 (80.37%), Query Frame = 0


Query: 3   SIMHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEKDKIG 62
           +IMHPSISLFPNSKFYS  ISDGPNVKAKAY+KTFLPGPMF SYSFI+ING REEKD+IG
Sbjct: 11  AIMHPSISLFPNSKFYSSQISDGPNVKAKAYEKTFLPGPMFDSYSFININGAREEKDEIG 70

Query: 63  HSWKNMVEVDAVLKIVHSLSQVCVRSKEKISIGVVSPYSAQVVTIQHKIGRKYNSNGFNV 122
           HS KNMVEVD VLKIVHSLSQ CV SK K+SIGVVSPYSAQVVTIQ KIG+KYN NGFNV
Sbjct: 71  HSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQVVTIQRKIGKKYNCNGFNV 130

Query: 123 KVSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTLSK 182
           KVSSVDGFQGG EDIIIISTV  N GSSIGFLSSNQRTNVALTRARYCLWILGN KTLSK
Sbjct: 131 KVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNIKTLSK 190

Query: 183 SNPVWEELVIDAKNRGCFFKADANAIFKDVERFIPLLDYEPNVDIDGGECRIRTIEAIED 242
           SN VWEELV+DAKN GCFF A+ANAI KD+++ +PLLDY  + D                
Sbjct: 191 SNSVWEELVMDAKNHGCFFNANANAITKDIQQIVPLLDYFNSND---------------- 250

Query: 243 NKKEEEKCKGISLEIMEGKNIVEEAQDSKA 273
                   +G SLEIMEGKN+  E  +SKA
Sbjct: 251 --------EGRSLEIMEGKNV--EDHESKA 254

[Close]

BLAST of Lsi11G000330 vs. NCBI nr
Match: XP_031736102.1 (helicase sen1 isoform X2 [Cucumis sativus] >XP_031736103.1 helicase sen1 isoform X2 [Cucumis sativus] >XP_031736104.1 helicase sen1 isoform X2 [Cucumis sativus] >XP_031736105.1 helicase sen1 isoform X2 [Cucumis sativus])

HSP 1 Score: 378.6 bits (971), Expect = 5.0e-101
Identity = 197/277 (71.12%), Postives = 216/277 (77.98%), Query Frame = 0


Query: 3   SIMHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEKDKIG 62
           +IMHPSISLFPNSKFYS  ISDGPNVK KAY+KTF+ GPMFGSYSFI+ING REEKD+IG
Sbjct: 11  AIMHPSISLFPNSKFYSSQISDGPNVKPKAYEKTFILGPMFGSYSFININGAREEKDEIG 70

Query: 63  HSWKNMVEVDAVLKIVHSLSQVCVRSKEKISIGVVSPYSAQVVTIQHKIGRKYNSNGFNV 122
           HS KNMVEVD VLKIVHSLSQ CV SK K+SIGVVSPYSAQVVTIQ KIG+KYN NGFNV
Sbjct: 71  HSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQVVTIQRKIGKKYNCNGFNV 130

Query: 123 KVSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTLSK 182
           KVSSVDGFQGGEEDIIIISTV  N GSSI FL SNQRTNVALTRARYCLW LGNFKTLSK
Sbjct: 131 KVSSVDGFQGGEEDIIIISTVPCNTGSSIWFLLSNQRTNVALTRARYCLWTLGNFKTLSK 190

Query: 183 SNPVWEELVIDAKNRGCFFKADANAIFKDVERFIPLLDYEPNVDIDGGECRIRTIEAIED 242
           SN VWEELV+DAKNRGCFF A+ANAI KD+++ +PLLDY  + D                
Sbjct: 191 SNSVWEELVMDAKNRGCFFNANANAITKDIQQIVPLLDYFNSND---------------- 250

Query: 243 NKKEEEKCKGISLEIMEGKNIVEEAQDSKAVTSFFRH 280
                   +G SLEIMEGKN+ +    +K +     H
Sbjct: 251 --------EGRSLEIMEGKNVEDHESKAKRLLQLLCH 263

[Close]

BLAST of Lsi11G000330 vs. NCBI nr
Match: XP_031736106.1 (helicase sen1 isoform X3 [Cucumis sativus] >KAE8653666.1 hypothetical protein Csa_007501 [Cucumis sativus])

HSP 1 Score: 377.5 bits (968), Expect = 1.1e-100
Identity = 199/270 (73.70%), Postives = 216/270 (80.00%), Query Frame = 0


Query: 3   SIMHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEKDKIG 62
           +IMHPSISLFPNSKFYS  ISDGPNVK KAY+KTF+ GPMFGSYSFI+ING REEKD+IG
Sbjct: 11  AIMHPSISLFPNSKFYSSQISDGPNVKPKAYEKTFILGPMFGSYSFININGAREEKDEIG 70

Query: 63  HSWKNMVEVDAVLKIVHSLSQVCVRSKEKISIGVVSPYSAQVVTIQHKIGRKYNSNGFNV 122
           HS KNMVEVD VLKIVHSLSQ CV SK K+SIGVVSPYSAQVVTIQ KIG+KYN NGFNV
Sbjct: 71  HSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQVVTIQRKIGKKYNCNGFNV 130

Query: 123 KVSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTLSK 182
           KVSSVDGFQGGEEDIIIISTV  N GSSI FL SNQRTNVALTRARYCLW LGNFKTLSK
Sbjct: 131 KVSSVDGFQGGEEDIIIISTVPCNTGSSIWFLLSNQRTNVALTRARYCLWTLGNFKTLSK 190

Query: 183 SNPVWEELVIDAKNRGCFFKADANAIFKDVERFIPLLDYEPNVDIDGGECRIRTIEAIED 242
           SN VWEELV+DAKNRGCFF A+ANAI KD+++ +PLLDY  + D                
Sbjct: 191 SNSVWEELVMDAKNRGCFFNANANAITKDIQQIVPLLDYFNSND---------------- 250

Query: 243 NKKEEEKCKGISLEIMEGKNIVEEAQDSKA 273
                   +G SLEIMEGKN+  E  +SKA
Sbjct: 251 --------EGRSLEIMEGKNV--EDHESKA 254

[Close]

BLAST of Lsi11G000330 vs. NCBI nr
Match: XP_031736100.1 (helicase sen1 isoform X1 [Cucumis sativus] >XP_031736101.1 helicase sen1 isoform X1 [Cucumis sativus])

HSP 1 Score: 377.5 bits (968), Expect = 1.1e-100
Identity = 199/270 (73.70%), Postives = 216/270 (80.00%), Query Frame = 0


Query: 3   SIMHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEKDKIG 62
           +IMHPSISLFPNSKFYS  ISDGPNVK KAY+KTF+ GPMFGSYSFI+ING REEKD+IG
Sbjct: 11  AIMHPSISLFPNSKFYSSQISDGPNVKPKAYEKTFILGPMFGSYSFININGAREEKDEIG 70

Query: 63  HSWKNMVEVDAVLKIVHSLSQVCVRSKEKISIGVVSPYSAQVVTIQHKIGRKYNSNGFNV 122
           HS KNMVEVD VLKIVHSLSQ CV SK K+SIGVVSPYSAQVVTIQ KIG+KYN NGFNV
Sbjct: 71  HSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQVVTIQRKIGKKYNCNGFNV 130

Query: 123 KVSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTLSK 182
           KVSSVDGFQGGEEDIIIISTV  N GSSI FL SNQRTNVALTRARYCLW LGNFKTLSK
Sbjct: 131 KVSSVDGFQGGEEDIIIISTVPCNTGSSIWFLLSNQRTNVALTRARYCLWTLGNFKTLSK 190

Query: 183 SNPVWEELVIDAKNRGCFFKADANAIFKDVERFIPLLDYEPNVDIDGGECRIRTIEAIED 242
           SN VWEELV+DAKNRGCFF A+ANAI KD+++ +PLLDY  + D                
Sbjct: 191 SNSVWEELVMDAKNRGCFFNANANAITKDIQQIVPLLDYFNSND---------------- 250

Query: 243 NKKEEEKCKGISLEIMEGKNIVEEAQDSKA 273
                   +G SLEIMEGKN+  E  +SKA
Sbjct: 251 --------EGRSLEIMEGKNV--EDHESKA 254

[Close]

BLAST of Lsi11G000330 vs. NCBI nr
Match: XP_022144472.1 (LOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like [Momordica charantia])

HSP 1 Score: 346.3 bits (887), Expect = 2.7e-91
Identity = 187/262 (71.37%), Postives = 200/262 (76.34%), Query Frame = 0


Query: 5   MHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEK-DKIGH 64
           MHPSISLFPNSKFYS  ISDGPNVKAK Y K+FLPGPMFGSYSFI IN GREEK D +GH
Sbjct: 381 MHPSISLFPNSKFYSNQISDGPNVKAKDYTKSFLPGPMFGSYSFIDINHGREEKRDGMGH 440

Query: 65  SWKNMVEVDAVLKIVHSLSQVCVRSKEKISIGVVSPYSAQVVTIQHKIGRKYNS-NGFNV 124
           SW+NM EV  VLKI+H+LS+ CVRSKEKISIGVVSPYSAQV  IQHK+GRKYN+  GF V
Sbjct: 441 SWRNMAEVHIVLKILHTLSKACVRSKEKISIGVVSPYSAQVAAIQHKVGRKYNNCGGFTV 500

Query: 125 KVSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTLSK 184
           KVSSVDGFQGGEEDIIIISTVR N GSSIGFLSSNQR NVALTRARYCLWILGNF  LSK
Sbjct: 501 KVSSVDGFQGGEEDIIIISTVRSNSGSSIGFLSSNQRANVALTRARYCLWILGNFNALSK 560

Query: 185 SNPVWEELVIDAKNRGCFFKADANAIFKDVERFIPLLD-------------------YEP 244
           SN V EELVIDAKNRGCFF+AD  AI + V+   P                       E 
Sbjct: 561 SNSVXEELVIDAKNRGCFFRAD--AILEHVKCSAPSSGPDSESILGNFNTLSKSNSVCES 620

Query: 245 NVDIDGGECRIRTIEAIEDNKK 246
           NVDIDGGEC  + I    D+KK
Sbjct: 621 NVDIDGGECFDQAIVVDGDDKK 640

[Close]

BLAST of Lsi11G000330 vs. TAIR 10
Match: AT1G65810.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 235.0 bits (598), Expect = 8.3e-62
Identity = 124/218 (56.88%), Postives = 155/218 (71.10%), Query Frame = 0


Query: 5   MHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEKDKIGHS 64
           MHPSIS+FPN +FY   I D P+V+ ++Y+K FLP  M+G YSFI+I  GRE+  + G+S
Sbjct: 628 MHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMYGPYSFINIAYGREQFGE-GYS 687

Query: 65  WKNMVEVDAVLKIVHSLSQVCVRSKEKISIGVVSPYSAQVVTIQHKIGRKYNSNG-FNVK 124
            KN+VEV  V +IV  L  V  ++   IS+GV+SPY AQV  IQ +IG KYN+ G F V 
Sbjct: 688 SKNLVEVSVVAEIVSKLYSVSRKTGRTISVGVISPYKAQVFAIQERIGEKYNTEGTFTVS 747

Query: 125 VSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTLSKS 184
           V SVDGFQGGEEDIIIISTVR N   +IGFLS+ QRTNVALTRARYCLWILGN  TL+ +
Sbjct: 748 VRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQRTNVALTRARYCLWILGNEATLTNN 807

Query: 185 NPVWEELVIDAKNRGCFFKADAN-AIFKDVERFIPLLD 221
             VW +LV DAK R CF  A+ + ++ + +ER    LD
Sbjct: 808 RSVWRQLVDDAKARNCFHNAEEDESLAQCIERSTTALD 844

[Close]

BLAST of Lsi11G000330 vs. TAIR 10
Match: AT1G65810.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 235.0 bits (598), Expect = 8.3e-62
Identity = 124/218 (56.88%), Postives = 155/218 (71.10%), Query Frame = 0


Query: 5   MHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEKDKIGHS 64
           MHPSIS+FPN +FY   I D P+V+ ++Y+K FLP  M+G YSFI+I  GRE+  + G+S
Sbjct: 628 MHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMYGPYSFINIAYGREQFGE-GYS 687

Query: 65  WKNMVEVDAVLKIVHSLSQVCVRSKEKISIGVVSPYSAQVVTIQHKIGRKYNSNG-FNVK 124
            KN+VEV  V +IV  L  V  ++   IS+GV+SPY AQV  IQ +IG KYN+ G F V 
Sbjct: 688 SKNLVEVSVVAEIVSKLYSVSRKTGRTISVGVISPYKAQVFAIQERIGEKYNTEGTFTVS 747

Query: 125 VSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTLSKS 184
           V SVDGFQGGEEDIIIISTVR N   +IGFLS+ QRTNVALTRARYCLWILGN  TL+ +
Sbjct: 748 VRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQRTNVALTRARYCLWILGNEATLTNN 807

Query: 185 NPVWEELVIDAKNRGCFFKADAN-AIFKDVERFIPLLD 221
             VW +LV DAK R CF  A+ + ++ + +ER    LD
Sbjct: 808 RSVWRQLVDDAKARNCFHNAEEDESLAQCIERSTTALD 844

[Close]

BLAST of Lsi11G000330 vs. TAIR 10
Match: AT5G37160.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 223.0 bits (567), Expect = 3.3e-58
Identity = 110/203 (54.19%), Postives = 145/203 (71.43%), Query Frame = 0


Query: 5   MHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEKDKIGHS 64
           MHPSIS FPN +FY G I+D  NV+   Y+K FL G MFG++SFI++  G+EE    GHS
Sbjct: 635 MHPSISRFPNKEFYGGRITDAANVQESIYEKRFLQGNMFGTFSFINVGRGKEEFGD-GHS 694

Query: 65  WKNMVEVDAVLKIVHSLSQVCVRSKEKISIGVVSPYSAQVVTIQHKIGRKYNSNG----F 124
            KNMVEV  + KI+ +L +V  + K+K+S+GV+SPY  QV  IQ ++G KYNS      F
Sbjct: 695 PKNMVEVAVISKIISNLFKVSSQRKQKMSVGVISPYKGQVRAIQERVGDKYNSLSVDQLF 754

Query: 125 NVKVSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTL 184
            + V SVDGFQGGE D+IIISTVR N   ++GFLS+ QR NVALTRAR+CLW++GN  TL
Sbjct: 755 TLNVQSVDGFQGGEVDVIIISTVRCNVNGNVGFLSNRQRANVALTRARHCLWVIGNGTTL 814

Query: 185 SKSNPVWEELVIDAKNRGCFFKA 204
           + S  +W EL+ +++ RGCF+ A
Sbjct: 815 ALSGSIWAELISESRTRGCFYDA 836

[Close]

BLAST of Lsi11G000330 vs. TAIR 10
Match: AT5G37150.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 221.5 bits (563), Expect = 9.5e-58
Identity = 112/202 (55.45%), Postives = 141/202 (69.80%), Query Frame = 0


Query: 5   MHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEKDKIGHS 64
           MHPSIS FPN +FY G I D  NVK   Y+K FL G MFGS+SFI++  G+EE    GHS
Sbjct: 602 MHPSISRFPNKEFYGGRIKDAENVKESIYQKRFLQGNMFGSFSFINVGRGKEEFGD-GHS 661

Query: 65  WKNMVEVDAVLKIVHSLSQVCVRSKEKISIGVVSPYSAQVVTIQHKIGRKYNS---NGFN 124
            KNMVEV  V +I+ +L +V    + K+S+GVVSPY  Q+  IQ KIG KY+S     F 
Sbjct: 662 PKNMVEVAVVSEIISNLFKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFA 721

Query: 125 VKVSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTLS 184
           + V SVDGFQGGEEDIIIISTVR N    +GFL++ QR NVALTRAR+CLW++GN  TL+
Sbjct: 722 LNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLNNRQRANVALTRARHCLWVIGNETTLA 781

Query: 185 KSNPVWEELVIDAKNRGCFFKA 204
            S  +W  L+ +++ RGCF+ A
Sbjct: 782 LSGSIWATLISESRTRGCFYDA 802

[Close]

BLAST of Lsi11G000330 vs. TAIR 10
Match: AT5G52090.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 217.6 bits (553), Expect = 1.4e-56
Identity = 111/210 (52.86%), Postives = 141/210 (67.14%), Query Frame = 0


Query: 5   MHPSISLFPNSKFYSGLISDGPNVKAKAYKKTFLPGPMFGSYSFISINGGREEKDKIGHS 64
           MHPSIS FPN +FY G I D  NVK   Y+K FL G MF S+SFI++  G+EE    GHS
Sbjct: 439 MHPSISRFPNKEFYGGRIKDAENVKESIYQKRFLKGNMFDSFSFINVGRGKEEFGD-GHS 498

Query: 65  WKNMVEVDAVLKIVHSLSQVCVRSKEKISIGVVSPYSAQVVTIQHKIGRKYNS---NGFN 124
            KNMVEV  + +I+ +L +V    + K+S+GVVSPY  Q+  IQ KIG KY+S     F 
Sbjct: 499 PKNMVEVAVISEIISNLYKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFT 558

Query: 125 VKVSSVDGFQGGEEDIIIISTVRPNRGSSIGFLSSNQRTNVALTRARYCLWILGNFKTLS 184
           + V SVDGFQGGEEDIIIISTVR N    +GFL++ QR NVALTRAR+CLW++GN  TL+
Sbjct: 559 LNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLA 618

Query: 185 KSNPVWEELVIDAKNRGCFFKADANAIFKD 212
            S  +W  L+ +++ RGCF  A      +D
Sbjct: 619 LSGSIWATLISESRTRGCFHDATDEMNLRD 647

The following BLAST results are available for this feature:

BLAST of Lsi11G000330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q00416	2.0e-28	37.31	Helicase SEN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292...	[more]
B6SFA4	9.9e-28	35.50	Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana OX=3702 GN=MAA3 PE=2 SV=1	[more]
O94387	3.8e-27	38.42	Uncharacterized ATP-dependent helicase C29A10.10c OS=Schizosaccharomyces pombe (...	[more]
Q9FJR0	4.2e-26	35.51	Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana OX=3702 GN=U...	[more]
Q9HEH1	7.1e-26	37.37	Regulator of nonsense transcripts 1 homolog OS=Neurospora crassa (strain ATCC 24...	[more]

BLAST of Lsi11G000330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTS8	1.3e-91	71.37	LOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like OS=Momordica charantia OX=...	[more]
A0A1S3CEY4	8.0e-81	76.85	uncharacterized protein LOC103500100 OS=Cucumis melo OX=3656 GN=LOC103500100 PE=...	[more]
A0A5D3CGE7	5.2e-80	70.18	Regulator of nonsense transcripts 1-like protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1CRP9	1.6e-73	68.47	uncharacterized protein LOC111014151 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A5C7HIU5	3.7e-70	65.73	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_017988 PE=4 SV=1	[more]

BLAST of Lsi11G000330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737582.1	7.7e-102	74.44	uncharacterized ATP-dependent helicase C29A10.10c isoform X1 [Cucumis sativus]	[more]
XP_031736102.1	5.0e-101	71.12	helicase sen1 isoform X2 [Cucumis sativus] >XP_031736103.1 helicase sen1 isoform...	[more]
XP_031736106.1	1.1e-100	73.70	helicase sen1 isoform X3 [Cucumis sativus] >KAE8653666.1 hypothetical protein Cs...	[more]
XP_031736100.1	1.1e-100	73.70	helicase sen1 isoform X1 [Cucumis sativus] >XP_031736101.1 helicase sen1 isoform...	[more]
XP_022144472.1	2.7e-91	71.37	LOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like [Momordica charantia]	[more]

BLAST of Lsi11G000330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65810.1	8.3e-62	56.88	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G65810.2	8.3e-62	56.88	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G37160.1	3.3e-58	54.19	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G37150.1	9.5e-58	55.45	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G52090.1	1.4e-56	52.86	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..214 e-value: 2.4E-56 score: 192.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 5..197
IPR041679	DNA2/NAM7 helicase-like, C-terminal	PFAM	PF13087	AAA_12	coord: 5..176 e-value: 4.1E-47 score: 160.4
IPR041679	DNA2/NAM7 helicase-like, C-terminal	CDD	cd18808	SF1_C_Upf1	coord: 5..195 e-value: 1.77421E-56 score: 178.967
IPR045055	DNA2/NAM7-like helicase	PANTHER	PTHR10887	DNA2/NAM7 HELICASE FAMILY	coord: 5..225
None	No IPR available	PANTHER	PTHR10887:SF474	OS04G0582700 PROTEIN	coord: 5..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G000330.1	Lsi11G000330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007015	actin filament organization
biological_process	GO:0009860	pollen tube growth
biological_process	GO:0030050	vesicle transport along actin filament
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0031982	vesicle
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0000146	microfilament motor activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003723	RNA binding