Lsi10G015690 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATTCGAAGAGCAGAACCTGAAGCATCAGTCTGAACAGATGTGCAGGACTATTGAGGTGGATACAATTGATCACCATCGCACTATTTCGTCGCTAGTCGTAATGGAAGCTTCCGAAGACTGCGACAGAGATGGTGACGGCCTCTATATTCCTCCTCTCAACTTTTCCATGGTTGATAATGGCATTTTCCGCTCCGGTTTCCCTGACTCTGCTAACTTCTCCTTCCTCCAAACCCTAGGTCTCCGTTCCATTATGTATGTATATTCTTTCGTTTGGTTACTTCTCATCGGAGTCTTTCATTTCTTTTGTTTTTTCGATTCAGTATCTATGTTTTGACTTTCTATATTCCTGTATTTGCATCGACTTATGGATGCAGATGTTTATGTCCGGAGCCGTATCCGGAACACAACATGGAGTTCCTCAAGTCGAACGGGATTAGATTGTTTCAATTTGGAATCGAAAGCTATAAGGTGTGTTTTCGTTCATTCTTGGAGTCTCCTTTATCTATTAGAATTGCTGATGTTTTTATTTTAATTGTCTTAGTTAACAACTCAACGCTAATAATTTGATTTCTATATTTGGATTAGGAAATTACTGCGTTAAATGTAGATGCTCAGCCTGTACACTATAGCACGTATTTTAAATTATGTGAAACATTACCAGAGAAGGCATGCGCAATTTAGTATGGAGTTGTTTATTACATAAATCGGTTTTCTTTTATAATTATGAAGTTTGAAAGTTAAAGAAGCTTCCGAGAGGGCAGAAGTACTCTAGATGTCTTGGGCGTAACTGATATTTGTTTCGAACTTTTGCATGATCTTGATATTATGCTGTAGTCATCGTTTGCTGTTATGAAGAATATGTGTTTAAGGATGATAAGTTATGGCGTGTATCGGTACAAATTTTGGCTAATAATTATGTTTGGTATTCGCACTCTTAAGTATATATACTACCAGTGAAAACTTGATCAATTAAGTGGTTATAATTGCGGGAATTGGGCTAATAAAAAAAACTGATACATAATCAGATTGACAAAAGAATTGGAGGGAAAAAAAAAAAAGAAACAATTTGAAATCGCTTATAAGAAGTGGAAATTTATTAAAAAAAATTTCTAATTGGCCTCGGTCCCTTTAAGTTGAGATGCAGTCAGGAGAAATAAGTAACTTGATTTCAGTTCTTCACCTCTGCATCTGCAGACAAACGTTTAATCTATTCAACACTAGACCATGGATACAGCTTGATGGAGATTGATATTTGGAATTTGAAAATATTGATTACTTAACAGCGATGTCATGGGTTATCTTTTGAGGATTAAAGTTTTATGATGAATGCCCACGAGCACTAAATCTATCATTGAACAGCTAGACCGTAAATATGTGATTTGAAACAGAACTAATTTTCTCAGCCAATATGAGCTACATGATTTGATCTACCAGTGTGTTAGACCACTTATCTTTCAGTATGAACGTGGGGGTAAAAAGGGAAAAGAGGTGGTTAACGAGAGTGGAGCGTCATCCACTAGTGGGACGTTGGGATCCACAGTCGGTTAGAGGGAGAGAGAAGTATAGGTAACCTGAGGGAGGGAAAGTTAGGTATCTTGCTTTTCATGTTTACCATTGGTTTCTTCTCTCGAGAGTGGGAAGAAGAATAGGTTGTGCTTGCCTTAAGGCTTTCTTTGAATTCAATAAGAGGACTCTTCTTGATTCCTATCATATTGGTATAAGAGCATCAACCTTGGGAGACTTGGCAAAATGGCGCAGAAGAAATTTGAAAAGAGACTTGATGCAACGAATCAGGAAATTGCTGAAATACGAGTGGAAGTTCAGAAGGTTGAGGGTTAGGAAATTTGAGGTTTTTCACAATGTTTCAAGCTTTAGGCTTACGCCTTGAAGCAAAATTTTAAGTTGTAGCTTCGAAACTTGCGCCTTCGTTGAACCATAAGAGGCTTATGCCTCTCATAGAAGAAGCTTACCTTGTGAAAATGCATCGAGGCTTAAAATCTATGTGCCTCGTCTAATGATTAGAAAAATAATAGTGATTTGCCTAGGTTGAATTAGGACTTTTTTTTATTGTTGTGACTTTAAAAACACTAACGGCAAAAATTTATAGTATAAATCAATCCTATTAATGATAATAGTAGTAGTGATGATAAAGATATCCTTTTAGATTTTTTGATTAAGTAAAAATTGTGGGGGTGACTTTCTTTTTACACTTTTATATGACAATCTTATTTAGCCGTACTTGGTTATACCAATTTAGGATTTTTAAAATGTTTCTTATTCACTATGTGAGGCTTACGCCTCGCCTCTTCAAGAGAAAAAGCCTCGAGGCCGACTTTAGCATTTTGAAACATTAGTTTTTCTGTTTGATACAGTTAGTAATTTGATTTACTATTGTATCATGTGATCTTAGGTTCAATAAAATTGATTACCAAGTATAATGTGTTCTTAAGTTTACGAAATTTGAGGGTTTTGGTTATCATTTTTCGCTTCTCTGTTGATTCAAATATTTACTTCATTGGATCCTTGTAAGCCATAACTCCACTACGCTGTCAGTGAACATCTTTTTCATCCTTTCTATCAGTGCCTCGGATTCTCTATGTTTATACCTCAGTTATGGATGCTTGATTTATGGTAATGTGGAATCAGCCTGCGTGATCTTTTATGGTCCACTTTAAGTGGTACTATGATGCTATGATTTTGTTCTAAATGAGAATACGAGTTACATATCTCTGACTGTGCTAGATTGCATAGTATAGCTATACAGTTATTTGAGTTAATCTACTGTTTTATACATTAATATTATTATTTGTGTATTCAGGAGCCTTTCGTGAACATCCCAGATGATATGATTCGTGAAGCACTGAAAGTTGTCCTTGGTACTACTGAATATCATCTTAAAACTGATTTGACTAAAGTAACTTATCATCCCAGATTATTGTTTCTTAATTAGGTTAAATTTTCTCAATGCAGACGATAGAAATCATCCAGTTCTCATACATTGCAAAAGAGGAAAGGTAGTCACCGTTTCCCCCCTATGCTTCCTTCTCATGAATCCAACTTCACTACTCTCTTAACTAGAAATTCTTCTCTCTCTATCCAGCATCGGACAGGTTGTCTTGTGGGATGCCTGAGAAAAGTGCAGAGGTGGTGCCTCACTTCTGTGTTTGATGAGTACCAGAGATTTGCAGCTGCAAAAGCAAGAATTTCAGACCAGAGGTTCATGGAGTTGTTTGATATCTCTGGCTTGAAGCATCTTCCCATGTCATTCTCATGCTCAAAATAG ATGAAATTCGAAGAGCAGAACCTGAAGCATCAGTCTGAACAGATGTGCAGGACTATTGAGGTGGATACAATTGATCACCATCGCACTATTTCGTCGCTAGTCGTAATGGAAGCTTCCGAAGACTGCGACAGAGATGGTGACGGCCTCTATATTCCTCCTCTCAACTTTTCCATGGTTGATAATGGCATTTTCCGCTCCGGTTTCCCTGACTCTGCTAACTTCTCCTTCCTCCAAACCCTAGGTCTCCGTTCCATTATATGTTTATGTCCGGAGCCGTATCCGGAACACAACATGGAGTTCCTCAAGTCGAACGGGATTAGATTGTTTCAATTTGGAATCGAAAGCTATAAGGAGCCTTTCGTGAACATCCCAGATGATATGATTCGTGAAGCACTGAAAGTTGTCCTTGACGATAGAAATCATCCAGTTCTCATACATTGCAAAAGAGGAAAGCATCGGACAGGTTGTCTTGTGGGATGCCTGAGAAAAGTGCAGAGGTGGTGCCTCACTTCTGTGTTTGATGAGTACCAGAGATTTGCAGCTGCAAAAGCAAGAATTTCAGACCAGAGGTTCATGGAGTTGTTTGATATCTCTGGCTTGAAGCATCTTCCCATGTCATTCTCATGCTCAAAATAG ATGAAATTCGAAGAGCAGAACCTGAAGCATCAGTCTGAACAGATGTGCAGGACTATTGAGGTGGATACAATTGATCACCATCGCACTATTTCGTCGCTAGTCGTAATGGAAGCTTCCGAAGACTGCGACAGAGATGGTGACGGCCTCTATATTCCTCCTCTCAACTTTTCCATGGTTGATAATGGCATTTTCCGCTCCGGTTTCCCTGACTCTGCTAACTTCTCCTTCCTCCAAACCCTAGGTCTCCGTTCCATTATATGTTTATGTCCGGAGCCGTATCCGGAACACAACATGGAGTTCCTCAAGTCGAACGGGATTAGATTGTTTCAATTTGGAATCGAAAGCTATAAGGAGCCTTTCGTGAACATCCCAGATGATATGATTCGTGAAGCACTGAAAGTTGTCCTTGACGATAGAAATCATCCAGTTCTCATACATTGCAAAAGAGGAAAGCATCGGACAGGTTGTCTTGTGGGATGCCTGAGAAAAGTGCAGAGGTGGTGCCTCACTTCTGTGTTTGATGAGTACCAGAGATTTGCAGCTGCAAAAGCAAGAATTTCAGACCAGAGGTTCATGGAGTTGTTTGATATCTCTGGCTTGAAGCATCTTCCCATGTCATTCTCATGCTCAAAATAG MKFEEQNLKHQSEQMCRTIEVDTIDHHRTISSLVVMEASEDCDRDGDGLYIPPLNFSMVDNGIFRSGFPDSANFSFLQTLGLRSIICLCPEPYPEHNMEFLKSNGIRLFQFGIESYKEPFVNIPDDMIREALKVVLDDRNHPVLIHCKRGKHRTGCLVGCLRKVQRWCLTSVFDEYQRFAAAKARISDQRFMELFDISGLKHLPMSFSCSK Homology
BLAST of Lsi10G015690 vs. ExPASy Swiss-Prot
Match: Q9ZVN4 (Tyrosine-protein phosphatase DSP1 OS=Arabidopsis thaliana OX=3702 GN=DSP1 PE=1 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 3.3e-83 Identity = 148/199 (74.37%), Postives = 167/199 (83.92%), Query Frame = 0
BLAST of Lsi10G015690 vs. ExPASy Swiss-Prot
Match: Q940L5 (Probable tyrosine-protein phosphatase DSP4 OS=Arabidopsis thaliana OX=3702 GN=DSP4 PE=2 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 9.4e-78 Identity = 132/169 (78.11%), Postives = 151/169 (89.35%), Query Frame = 0
BLAST of Lsi10G015690 vs. ExPASy Swiss-Prot
Match: Q84MD6 (Tyrosine-protein phosphatase DSP2 OS=Arabidopsis thaliana OX=3702 GN=DSP2 PE=1 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 1.3e-74 Identity = 142/237 (59.92%), Postives = 167/237 (70.46%), Query Frame = 0
BLAST of Lsi10G015690 vs. ExPASy Swiss-Prot
Match: Q0DX67 (Probable tyrosine-protein phosphatase DSP2 OS=Oryza sativa subsp. japonica OX=39947 GN=DSP2 PE=2 SV=2) HSP 1 Score: 248.1 bits (632), Expect = 9.2e-65 Identity = 114/162 (70.37%), Postives = 133/162 (82.10%), Query Frame = 0
BLAST of Lsi10G015690 vs. ExPASy Swiss-Prot
Match: Q681Z2 (Tyrosine-protein phosphatase DSP3 OS=Arabidopsis thaliana OX=3702 GN=DSP3 PE=1 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 3.5e-56 Identity = 103/167 (61.68%), Postives = 127/167 (76.05%), Query Frame = 0
BLAST of Lsi10G015690 vs. ExPASy TrEMBL
Match: A0A6J1D9C9 (probable tyrosine-protein phosphatase At1g05000 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018115 PE=3 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 3.0e-111 Identity = 193/211 (91.47%), Postives = 202/211 (95.73%), Query Frame = 0
BLAST of Lsi10G015690 vs. ExPASy TrEMBL
Match: A0A6J1D8W1 (probable tyrosine-protein phosphatase At1g05000 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018115 PE=3 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 3.0e-111 Identity = 193/211 (91.47%), Postives = 202/211 (95.73%), Query Frame = 0
BLAST of Lsi10G015690 vs. ExPASy TrEMBL
Match: A0A6J1G6R1 (probable tyrosine-protein phosphatase At1g05000 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451380 PE=3 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 5.1e-111 Identity = 193/214 (90.19%), Postives = 205/214 (95.79%), Query Frame = 0
BLAST of Lsi10G015690 vs. ExPASy TrEMBL
Match: A0A6J1G6S0 (probable tyrosine-protein phosphatase At1g05000 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451380 PE=3 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 5.1e-111 Identity = 193/214 (90.19%), Postives = 205/214 (95.79%), Query Frame = 0
BLAST of Lsi10G015690 vs. ExPASy TrEMBL
Match: A0A6J1FUL3 (probable tyrosine-protein phosphatase At1g05000 OS=Cucurbita moschata OX=3662 GN=LOC111448944 PE=3 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 1.1e-110 Identity = 195/211 (92.42%), Postives = 199/211 (94.31%), Query Frame = 0
BLAST of Lsi10G015690 vs. NCBI nr
Match: XP_038901598.1 (probable tyrosine-protein phosphatase DSP4 [Benincasa hispida]) HSP 1 Score: 439.5 bits (1129), Expect = 1.6e-119 Identity = 208/211 (98.58%), Postives = 210/211 (99.53%), Query Frame = 0
BLAST of Lsi10G015690 vs. NCBI nr
Match: XP_022149760.1 (probable tyrosine-protein phosphatase At1g05000 isoform X1 [Momordica charantia] >XP_022149761.1 probable tyrosine-protein phosphatase At1g05000 isoform X1 [Momordica charantia]) HSP 1 Score: 411.0 bits (1055), Expect = 6.2e-111 Identity = 193/211 (91.47%), Postives = 202/211 (95.73%), Query Frame = 0
BLAST of Lsi10G015690 vs. NCBI nr
Match: XP_022149762.1 (probable tyrosine-protein phosphatase At1g05000 isoform X2 [Momordica charantia]) HSP 1 Score: 411.0 bits (1055), Expect = 6.2e-111 Identity = 193/211 (91.47%), Postives = 202/211 (95.73%), Query Frame = 0
BLAST of Lsi10G015690 vs. NCBI nr
Match: KAG6604753.1 (Tyrosine-protein phosphatase DSP1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 411.0 bits (1055), Expect = 6.2e-111 Identity = 193/214 (90.19%), Postives = 205/214 (95.79%), Query Frame = 0
BLAST of Lsi10G015690 vs. NCBI nr
Match: XP_022947544.1 (probable tyrosine-protein phosphatase At1g05000 isoform X1 [Cucurbita moschata] >XP_022947545.1 probable tyrosine-protein phosphatase At1g05000 isoform X1 [Cucurbita moschata] >XP_022947546.1 probable tyrosine-protein phosphatase At1g05000 isoform X1 [Cucurbita moschata]) HSP 1 Score: 410.2 bits (1053), Expect = 1.1e-110 Identity = 193/214 (90.19%), Postives = 205/214 (95.79%), Query Frame = 0
BLAST of Lsi10G015690 vs. TAIR 10
Match: AT1G05000.1 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 309.3 bits (791), Expect = 2.4e-84 Identity = 148/199 (74.37%), Postives = 167/199 (83.92%), Query Frame = 0
BLAST of Lsi10G015690 vs. TAIR 10
Match: AT1G05000.2 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 292.7 bits (748), Expect = 2.3e-79 Identity = 148/231 (64.07%), Postives = 167/231 (72.29%), Query Frame = 0
BLAST of Lsi10G015690 vs. TAIR 10
Match: AT4G03960.1 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 291.2 bits (744), Expect = 6.7e-79 Identity = 132/169 (78.11%), Postives = 151/169 (89.35%), Query Frame = 0
BLAST of Lsi10G015690 vs. TAIR 10
Match: AT2G32960.1 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 280.8 bits (717), Expect = 9.1e-76 Identity = 142/237 (59.92%), Postives = 167/237 (70.46%), Query Frame = 0
BLAST of Lsi10G015690 vs. TAIR 10
Match: AT3G02800.1 (Tyrosine phosphatase family protein ) HSP 1 Score: 219.5 bits (558), Expect = 2.5e-57 Identity = 103/167 (61.68%), Postives = 127/167 (76.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|