Homology
BLAST of Lsi10G013990 vs. ExPASy Swiss-Prot
Match:
Q01587 (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus OX=3659 PE=2 SV=1)
HSP 1 Score: 771.9 bits (1992), Expect = 5.4e-222
Identity = 373/398 (93.72%), Postives = 385/398 (96.73%), Query Frame = 0
Query: 30 NTMQLNNSNYGGLVPNSAFLGSRLKVGSRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL 89
N LNNSNYGGLVPNSAFLGSRLKV SRFTTSKMV GNFKIVAE DEEKQTEKDKWRGL
Sbjct: 12 NRTTLNNSNYGGLVPNSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGL 71
Query: 90 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 149
AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAV+SSYEYISAGLR+Y++DN+VDGFYIA
Sbjct: 72 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIA 131
Query: 150 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 209
PAFMDKL VHIVKNFL LPNIKVPLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 132 PAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 191
Query: 210 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRFGGATQYTVNNQMVNATL 269
ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGR GG TQYTVNNQMVNATL
Sbjct: 192 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATL 251
Query: 270 MNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 329
MNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG
Sbjct: 252 MNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 311
Query: 330 ICTGIFRTDGVPIEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVDSIGRNLV 389
ICTGIFRTDGVP EDI+KLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGV+ IGRNLV
Sbjct: 312 ICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLV 371
Query: 390 NSKEGPPTFDEPKMTLEKLLEYGNMLIMEQENVKRVKL 428
NSKE PPTFD+PKMT+EKLLEYGNML+MEQENVKRVKL
Sbjct: 372 NSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409
BLAST of Lsi10G013990 vs. ExPASy Swiss-Prot
Match:
Q40281 (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica OX=3750 GN=RCA PE=2 SV=1)
HSP 1 Score: 709.5 bits (1830), Expect = 3.3e-203
Identity = 344/417 (82.49%), Postives = 377/417 (90.41%), Query Frame = 0
Query: 34 LNNSNYGGLVPNSAFLGSRL-KVGSRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGLAFD 93
LN S+ VP+S FLGS L KV SRFT SK+ G+ +IVA DE+KQT+KD+W+GLAFD
Sbjct: 18 LNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFD 77
Query: 94 TSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIAPAF 153
TSDDQQDITRGKG D LFQAP G+GTH A+MSSYEYIS GLR+YNFDN++DG+YIAPAF
Sbjct: 78 TSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAF 137
Query: 154 MDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESG 213
MDKL+VHI KNF+ LPN+KVPLILGIWGGKGQGKSFQCELVFAKM I+PIMMSAGELESG
Sbjct: 138 MDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESG 197
Query: 214 NAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRFGGATQYTVNNQMVNATLMNI 273
NAGEPAKLIRQRYREAADII+KGKMC LFINDLDAGAGR GG TQYTVNNQMVNATLMNI
Sbjct: 198 NAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNI 257
Query: 274 ADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGICT 333
ADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGRM+KFYWAPTREDRIG+C
Sbjct: 258 ADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCI 317
Query: 334 GIFRTDGVPIEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVDSIGRNLVNSK 393
GIFR+D V EDI+KLVDTFPGQSIDFFGALRARVYDDEVRKW GVGVDSIG+ LVNSK
Sbjct: 318 GIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSK 377
Query: 394 EGPPTFDEPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANEDVVQFET 450
EGPPTF++PKMT+EKLLEYGNML+ EQENVKRV+LADKYL+EAALGDAN D + T
Sbjct: 378 EGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGT 434
BLAST of Lsi10G013990 vs. ExPASy Swiss-Prot
Match:
Q7X999 (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata OX=66636 GN=RCA2 PE=2 SV=1)
HSP 1 Score: 694.1 bits (1790), Expect = 1.4e-198
Identity = 339/417 (81.29%), Postives = 375/417 (89.93%), Query Frame = 0
Query: 32 MQLNNSN-YGGLVPNSAFLGSRLKVGSRFTTSKMVIGNFKIVA-EHDEEKQTEKDKWRGL 91
+ LN S LVP++AF GS LK S K GNFKIVA E E++QT+KDKW+GL
Sbjct: 16 LSLNGSGARASLVPSTAFFGSSLK-KSAAKFPKASSGNFKIVAQEISEDQQTDKDKWKGL 75
Query: 92 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 151
A+D SDDQQDITRGKG+ D LFQAPM +GTH AVMSSY+YIS GLR+YN DN++DGFYIA
Sbjct: 76 AYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIA 135
Query: 152 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 211
PAFMDKL+VHI KNFL+LPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 136 PAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 195
Query: 212 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRFGGATQYTVNNQMVNATL 271
ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGR GG TQYTVNNQMVNATL
Sbjct: 196 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATL 255
Query: 272 MNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 331
MNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGRM+KFYWAPTREDRIG
Sbjct: 256 MNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIG 315
Query: 332 ICTGIFRTDGVPIEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVDSIGRNLV 391
+C GIFRTD VP EDI+K+VD FPGQSIDFFGALRARVYDDEVRKW VGVD+IG+ LV
Sbjct: 316 VCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLV 375
Query: 392 NSKEGPPTFDEPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANEDVVQ 447
NSKEGPPTF++PKMT++KLL+YGNML+ EQENVKRV+LADKY++EAALGDAN+D ++
Sbjct: 376 NSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIK 431
BLAST of Lsi10G013990 vs. ExPASy Swiss-Prot
Match:
O98997 (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Vigna radiata var. radiata OX=3916 GN=RCA PE=2 SV=2)
HSP 1 Score: 688.0 bits (1774), Expect = 1.0e-196
Identity = 337/420 (80.24%), Postives = 369/420 (87.86%), Query Frame = 0
Query: 32 MQLNNSNYGGLVPNSAFLGSRLK--VGSRFTTSKMVIGNFKIVA---EHDEEKQTEKDKW 91
+ LN S G P SAF G+ LK V SR SK+ G+FKIVA E +E +QT KD+W
Sbjct: 16 LNLNGSGAGASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRW 75
Query: 92 RGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGF 151
+GLA+D SDDQQDITRGKG+ DPLFQAPM GTH AVMSSYEY+S GLR+ DN DGF
Sbjct: 76 KGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGF 135
Query: 152 YIAPAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA 211
YIAPAF+DKL+VHI KNF+ LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA
Sbjct: 136 YIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA 195
Query: 212 GELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRFGGATQYTVNNQMVN 271
GELESGNAGEPAKLIRQRYREAAD+I KGKMC LFINDLDAGAGR GG TQYTVNNQMVN
Sbjct: 196 GELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVN 255
Query: 272 ATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTRED 331
ATLMNIADNPTNVQLPG+YNKEEN RVPIIVTGNDFSTLYAPLIRDGRM+KFYWAPTR+D
Sbjct: 256 ATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDD 315
Query: 332 RIGICTGIFRTDGVPIEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVDSIGR 391
R+G+C GIFRTDGVP EDI KLVDTFPGQSIDFFGALRARVYDDEVRKW GVGVD+ G+
Sbjct: 316 RVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGK 375
Query: 392 NLVNSKEGPPTFDEPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANEDVVQ 447
LVNSKEGPPTFD+PKM+L+KLL+YGNML+ EQENVKRV+LADKYLNEAALG+ANED ++
Sbjct: 376 KLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIK 433
BLAST of Lsi10G013990 vs. ExPASy Swiss-Prot
Match:
O64981 (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris OX=3885 GN=RCA1 PE=2 SV=1)
HSP 1 Score: 684.5 bits (1765), Expect = 1.1e-195
Identity = 333/420 (79.29%), Postives = 372/420 (88.57%), Query Frame = 0
Query: 32 MQLNNSNYGGLVPNSAFLGSRLK--VGSRFTTSKMVIGNFKIVA---EHDEEKQTEKDKW 91
+ LN S G P+SAF G+ LK + SR SK+ G+FKIVA E +E +QTE D+W
Sbjct: 16 LNLNGSGGGASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRW 75
Query: 92 RGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGF 151
RGLA+D SDDQQDITRGKGL D LFQAPM GTH AV+SS++Y+SAGLR+YNFDN DGF
Sbjct: 76 RGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGF 135
Query: 152 YIAPAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA 211
YIAPAF+DKL+VHI KNF+ LPNIKVPLILG+WGGKGQGKSFQCELVFAKMGINPIMMSA
Sbjct: 136 YIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSA 195
Query: 212 GELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRFGGATQYTVNNQMVN 271
GELESGNAGEPAKLIRQRYREA+D+IKKGKMC LFINDLDAGAGR GG TQYTVNNQMVN
Sbjct: 196 GELESGNAGEPAKLIRQRYREASDLIKKGKMCVLFINDLDAGAGRLGGTTQYTVNNQMVN 255
Query: 272 ATLMNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTRED 331
ATLMNIADNPTNVQLPG+YNKE+N RVPIIVTGNDFSTLYAPLIRDGRM+KFYWAPTRED
Sbjct: 256 ATLMNIADNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRED 315
Query: 332 RIGICTGIFRTDGVPIEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVDSIGR 391
RIG+C GIFRTDGVP +DI++LVD PGQSIDFFGALRARVYDDEVRKW GVGVDS+G+
Sbjct: 316 RIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGK 375
Query: 392 NLVNSKEGPPTFDEPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANEDVVQ 447
LVNSKEGPPTFD+PKMTL+KLL Y +ML+ EQENVKRV+LAD+YLNEAALG+ANED ++
Sbjct: 376 KLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIK 435
BLAST of Lsi10G013990 vs. ExPASy TrEMBL
Match:
A0A1S3CKP1 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502060 PE=4 SV=1)
HSP 1 Score: 1067.4 bits (2759), Expect = 2.3e-308
Identity = 550/601 (91.51%), Postives = 575/601 (95.67%), Query Frame = 0
Query: 30 NTMQLNNSNYGGLVPNSAFLGSRLKVGSRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL 89
N LNNSNYGGLVPNSAFLGSRLKV SRFTTSKMV GNFKIVAE +EEKQTEKDKWRGL
Sbjct: 12 NRTTLNNSNYGGLVPNSAFLGSRLKVISRFTTSKMVTGNFKIVAEQEEEKQTEKDKWRGL 71
Query: 90 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 149
AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAV+SSYEYISAGLR+Y++DN+VDGFYIA
Sbjct: 72 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRQYDYDNNVDGFYIA 131
Query: 150 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 209
PAFMDKL VHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 132 PAFMDKLTVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 191
Query: 210 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRFGGATQYTVNNQMVNATL 269
ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGR GG TQYTVNNQMVNATL
Sbjct: 192 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATL 251
Query: 270 MNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 329
MNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG
Sbjct: 252 MNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 311
Query: 330 ICTGIFRTDGVPIEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVDSIGRNLV 389
IC+GIFRTDGVP EDI++LVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGV+ IGRNLV
Sbjct: 312 ICSGIFRTDGVPFEDIVRLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVEHIGRNLV 371
Query: 390 NSKEGPPTFDEPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANEDVVQFET 449
NSKE PPTFD+PKMT+EKLLEYGNMLIMEQENVKRVKLADKYL+EAALGDANED VQF+T
Sbjct: 372 NSKESPPTFDQPKMTIEKLLEYGNMLIMEQENVKRVKLADKYLSEAALGDANEDDVQFKT 431
Query: 450 SQEAALEVANEDVVQSETSNEVALEDANNEDVESGTSNEAALENANEDTVEALIDTNEDV 509
SQEAALEVANEDVVQSETSNE ALEDA NEDVESG+SNE ALENANE+TVEALIDTNEDV
Sbjct: 432 SQEAALEVANEDVVQSETSNEAALEDA-NEDVESGSSNETALENANEETVEALIDTNEDV 491
Query: 510 VQSETSYEVPLGNANEDAIQSKTSYEVAVEDATEDVVQSGTSEESALVDANEDVVQSGTS 569
+ S+E+PLG ANEDA+QSKTSYEVAVEDATEDVVQS SEE AL+DANEDVVQSGT
Sbjct: 492 L----SHEIPLGIANEDAVQSKTSYEVAVEDATEDVVQSEISEEPALMDANEDVVQSGTF 551
Query: 570 IEAASVDANKDVVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTMPQQPDSTTKASSID 629
IEAA+VDANKDVVQSGTSYESMGEEERNKLIS+FLKAVQIHLLKTM QQPDST+KASSID
Sbjct: 552 IEAAAVDANKDVVQSGTSYESMGEEERNKLISMFLKAVQIHLLKTMSQQPDSTSKASSID 607
Query: 630 S 631
S
Sbjct: 612 S 607
BLAST of Lsi10G013990 vs. ExPASy TrEMBL
Match:
C5J0I3 (Chloroplast rubisco activase OS=Cucumis sativus OX=3659 GN=rca PE=2 SV=1)
HSP 1 Score: 1066.2 bits (2756), Expect = 5.2e-308
Identity = 553/602 (91.86%), Postives = 575/602 (95.51%), Query Frame = 0
Query: 30 NTMQLNNSNYGGLVPNSAFLGSRLKVGSRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL 89
N LNNSNYGGLVPNSAFLGSRLKV SRFTTSKMV GNFKIVAE DEEKQTEKDKWRGL
Sbjct: 12 NRTTLNNSNYGGLVPNSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGL 71
Query: 90 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 149
AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAV+SSYEYISAGLR+Y++DN+VDGFYIA
Sbjct: 72 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIA 131
Query: 150 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 209
PAFMDKL VHIVKNFL LPNIKVPLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 132 PAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 191
Query: 210 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRFGGATQYTVNNQMVNATL 269
ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGR GG TQYTVNNQMVNATL
Sbjct: 192 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATL 251
Query: 270 MNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 329
MNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG
Sbjct: 252 MNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 311
Query: 330 ICTGIFRTDGVPIEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVDSIGRNLV 389
ICTGIFRTDGVP EDI+KLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGV+ IGRNLV
Sbjct: 312 ICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLV 371
Query: 390 NSKEGPPTFDEPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANEDVVQFET 449
NSKE PPTFD+PKMT+EKLLEYGNML+MEQENVKRVKLADKYLNEAALGDANED VQF+T
Sbjct: 372 NSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKLADKYLNEAALGDANEDDVQFKT 431
Query: 450 SQEAALEVANEDVVQSETSNEVALEDANNEDVESGTSNEAALENANEDTVEALIDTNEDV 509
SQEAAL+VANEDVVQSETS EVALEDA NEDVESG+SNE ALENA E+TVEALIDTNEDV
Sbjct: 432 SQEAALDVANEDVVQSETSEEVALEDA-NEDVESGSSNETALENAIEETVEALIDTNEDV 491
Query: 510 VQSETSYEVPLGNANEDAIQSKTSYEVAVEDATEDVVQSGTSEESALVDANEDVVQSGTS 569
VQ ETS+EVPLG ANEDA+QSKTSYEVAVEDATEDVVQS SEE AL+ ANEDVVQSG+S
Sbjct: 492 VQLETSHEVPLGIANEDAVQSKTSYEVAVEDATEDVVQSEISEEPALMGANEDVVQSGSS 551
Query: 570 IEAASVDANKD-VVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTMPQQPDSTTKASSI 629
EAA+VDAN+D VVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTM QQPDSTTKASSI
Sbjct: 552 -EAATVDANEDVVVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTMSQQPDSTTKASSI 611
Query: 630 DS 631
DS
Sbjct: 612 DS 611
BLAST of Lsi10G013990 vs. ExPASy TrEMBL
Match:
A0A0A0KH85 (ATPase_AAA_core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G188680 PE=4 SV=1)
HSP 1 Score: 1062.0 bits (2745), Expect = 9.7e-307
Identity = 553/602 (91.86%), Postives = 575/602 (95.51%), Query Frame = 0
Query: 30 NTMQLNNSNYGGLVPNSAFLGSRLKVGSRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL 89
N LNNSNYGGLVPNSAFLGSRLKV SRFTTSKMV GNFKIVAE DEEKQTEKDKWRGL
Sbjct: 12 NRTTLNNSNYGGLVPNSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGL 71
Query: 90 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 149
AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAV+SSYEYISAGLR+Y++DN+VDGFYIA
Sbjct: 72 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIA 131
Query: 150 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 209
PAFMDKL VHIVKNFL LPNIKVPLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 132 PAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 191
Query: 210 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRFGGATQYTVNNQMVNATL 269
ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGR GG TQYTVNNQMVNATL
Sbjct: 192 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATL 251
Query: 270 MNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 329
MNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG
Sbjct: 252 MNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 311
Query: 330 ICTGIFRTDGVPIEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVDSIGRNLV 389
ICTGIFRTDGVP EDI+KLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGV+ IGRNLV
Sbjct: 312 ICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLV 371
Query: 390 NSKEGPPTFDEPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANEDVVQFET 449
NSKE PPTFD+PKMT+EKLLEYGNML+MEQENVKRVKLADKYLNEAALGDANED VQF+T
Sbjct: 372 NSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKLADKYLNEAALGDANEDDVQFKT 431
Query: 450 SQEAALEVANEDVVQSETSNEVALEDANNEDVESGTSNEAALENANEDTVEALIDTNEDV 509
SQEAAL+VANEDVVQSETS EVALEDA NEDVESG+SNE ALENA E+TVEALIDTNEDV
Sbjct: 432 SQEAALDVANEDVVQSETS-EVALEDA-NEDVESGSSNETALENAIEETVEALIDTNEDV 491
Query: 510 VQSETSYEVPLGNANEDAIQSKTSYEVAVEDATEDVVQSGTSEESALVDANEDVVQSGTS 569
VQ ETS+EVPLG ANEDA+QSKTSYEVAVEDATEDVVQS SEE AL+ ANEDVVQSG+S
Sbjct: 492 VQLETSHEVPLGIANEDAVQSKTSYEVAVEDATEDVVQSEISEEPALMGANEDVVQSGSS 551
Query: 570 IEAASVDANKD-VVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTMPQQPDSTTKASSI 629
EAA+VDAN+D VVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTM QQPDSTTKASSI
Sbjct: 552 -EAATVDANEDVVVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTMSQQPDSTTKASSI 610
Query: 630 DS 631
DS
Sbjct: 612 DS 610
BLAST of Lsi10G013990 vs. ExPASy TrEMBL
Match:
A0A1S3CL51 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502060 PE=4 SV=1)
HSP 1 Score: 1061.2 bits (2743), Expect = 1.7e-306
Identity = 549/601 (91.35%), Postives = 574/601 (95.51%), Query Frame = 0
Query: 30 NTMQLNNSNYGGLVPNSAFLGSRLKVGSRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL 89
N LNNSNYGGLVPNSAFLGSRLKV SRFTTSKMV GNFKIVAE +EEKQTEKDKWRGL
Sbjct: 12 NRTTLNNSNYGGLVPNSAFLGSRLKVISRFTTSKMVTGNFKIVAEQEEEKQTEKDKWRGL 71
Query: 90 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 149
AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAV+SSYEYISAGLR+Y++DN+VDGFYIA
Sbjct: 72 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRQYDYDNNVDGFYIA 131
Query: 150 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 209
PAFMDKL VHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 132 PAFMDKLTVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 191
Query: 210 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRFGGATQYTVNNQMVNATL 269
ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGR GG TQYTVNNQMVNATL
Sbjct: 192 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATL 251
Query: 270 MNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 329
MNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG
Sbjct: 252 MNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 311
Query: 330 ICTGIFRTDGVPIEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVDSIGRNLV 389
IC+GIFRTDGVP EDI++LVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGV+ IGRNLV
Sbjct: 312 ICSGIFRTDGVPFEDIVRLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVEHIGRNLV 371
Query: 390 NSKEGPPTFDEPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANEDVVQFET 449
NSKE PPTFD+PKMT+EKLLEYGNMLIMEQENVKRVKLADKYL+EAALGDANED VQF+T
Sbjct: 372 NSKESPPTFDQPKMTIEKLLEYGNMLIMEQENVKRVKLADKYLSEAALGDANEDDVQFKT 431
Query: 450 SQEAALEVANEDVVQSETSNEVALEDANNEDVESGTSNEAALENANEDTVEALIDTNEDV 509
SQEAALEVANEDVVQSETSNE ALEDA NEDVESG+SNE ALENANE+TVEALIDTNEDV
Sbjct: 432 SQEAALEVANEDVVQSETSNEAALEDA-NEDVESGSSNETALENANEETVEALIDTNEDV 491
Query: 510 VQSETSYEVPLGNANEDAIQSKTSYEVAVEDATEDVVQSGTSEESALVDANEDVVQSGTS 569
+ S+E+PLG ANEDA+QSKTSYEVAVEDATEDVVQS SEE AL+DANEDVVQSGT
Sbjct: 492 L----SHEIPLGIANEDAVQSKTSYEVAVEDATEDVVQSEISEEPALMDANEDVVQSGTF 551
Query: 570 IEAASVDANKDVVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTMPQQPDSTTKASSID 629
I AA+VDANKDVVQSGTSYESMGEEERNKLIS+FLKAVQIHLLKTM QQPDST+KASSID
Sbjct: 552 I-AAAVDANKDVVQSGTSYESMGEEERNKLISMFLKAVQIHLLKTMSQQPDSTSKASSID 606
Query: 630 S 631
S
Sbjct: 612 S 606
BLAST of Lsi10G013990 vs. ExPASy TrEMBL
Match:
A0A1S4E4J7 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502060 PE=4 SV=1)
HSP 1 Score: 1061.2 bits (2743), Expect = 1.7e-306
Identity = 549/601 (91.35%), Postives = 574/601 (95.51%), Query Frame = 0
Query: 30 NTMQLNNSNYGGLVPNSAFLGSRLKVGSRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL 89
N LNNSNYGGLVPNSAFLGSRLKV SRFTTSKMV GNFKIVAE +EEKQTEKDKWRGL
Sbjct: 12 NRTTLNNSNYGGLVPNSAFLGSRLKVISRFTTSKMVTGNFKIVAEQEEEKQTEKDKWRGL 71
Query: 90 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 149
AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAV+SSYEYISAGLR+Y++DN+VDGFYIA
Sbjct: 72 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRQYDYDNNVDGFYIA 131
Query: 150 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 209
PAFMDKL VHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 132 PAFMDKLTVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 191
Query: 210 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRFGGATQYTVNNQMVNATL 269
ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGR GG TQYTVNNQMVNATL
Sbjct: 192 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATL 251
Query: 270 MNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 329
MNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG
Sbjct: 252 MNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 311
Query: 330 ICTGIFRTDGVPIEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVDSIGRNLV 389
IC+GIFRTDGVP EDI++LVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGV+ IGRNLV
Sbjct: 312 ICSGIFRTDGVPFEDIVRLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVEHIGRNLV 371
Query: 390 NSKEGPPTFDEPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANEDVVQFET 449
NSKE PPTFD+PKMT+EKLLEYGNMLIMEQENVKRVKLADKYL+EAALGDANED VQF+T
Sbjct: 372 NSKESPPTFDQPKMTIEKLLEYGNMLIMEQENVKRVKLADKYLSEAALGDANEDDVQFKT 431
Query: 450 SQEAALEVANEDVVQSETSNEVALEDANNEDVESGTSNEAALENANEDTVEALIDTNEDV 509
SQEAALEVANEDVVQSETSN ALEDA NEDVESG+SNE ALENANE+TVEALIDTNEDV
Sbjct: 432 SQEAALEVANEDVVQSETSN-AALEDA-NEDVESGSSNETALENANEETVEALIDTNEDV 491
Query: 510 VQSETSYEVPLGNANEDAIQSKTSYEVAVEDATEDVVQSGTSEESALVDANEDVVQSGTS 569
+ S+E+PLG ANEDA+QSKTSYEVAVEDATEDVVQS SEE AL+DANEDVVQSGT
Sbjct: 492 L----SHEIPLGIANEDAVQSKTSYEVAVEDATEDVVQSEISEEPALMDANEDVVQSGTF 551
Query: 570 IEAASVDANKDVVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTMPQQPDSTTKASSID 629
IEAA+VDANKDVVQSGTSYESMGEEERNKLIS+FLKAVQIHLLKTM QQPDST+KASSID
Sbjct: 552 IEAAAVDANKDVVQSGTSYESMGEEERNKLISMFLKAVQIHLLKTMSQQPDSTSKASSID 606
Query: 630 S 631
S
Sbjct: 612 S 606
BLAST of Lsi10G013990 vs. NCBI nr
Match:
XP_038901350.1 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X1 [Benincasa hispida] >XP_038901351.1 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X1 [Benincasa hispida])
HSP 1 Score: 1096.3 bits (2834), Expect = 0.0e+00
Identity = 571/602 (94.85%), Postives = 582/602 (96.68%), Query Frame = 0
Query: 30 NTMQLNNSNYGGLVPNSAFLGSRLKVGSRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL 89
N LNNSNYGGLVPNSAFLGSRLK SRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL
Sbjct: 12 NRTTLNNSNYGGLVPNSAFLGSRLKASSRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL 71
Query: 90 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 149
AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA
Sbjct: 72 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 131
Query: 150 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 209
PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 132 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 191
Query: 210 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRFGGATQYTVNNQMVNATL 269
ESGNAGEPAKL+RQRYREAADIIKKGKMCCLFINDLDAGAGR GG TQYTVNNQMVNATL
Sbjct: 192 ESGNAGEPAKLLRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATL 251
Query: 270 MNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 329
MNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG
Sbjct: 252 MNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 311
Query: 330 ICTGIFRTDGVPIEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVDSIGRNLV 389
ICTGIFRTD VPIEDI+KLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGV+SIGRNLV
Sbjct: 312 ICTGIFRTDDVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVESIGRNLV 371
Query: 390 NSKEGPPTFDEPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANEDVVQFET 449
NSKEGPPTFD+PKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDAN DVVQFET
Sbjct: 372 NSKEGPPTFDQPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANVDVVQFET 431
Query: 450 SQEAALEVANEDVVQSETSNEVALEDANNEDVESGTSNEAALENANEDTVEALIDTNEDV 509
SQEAALEVANEDVVQSETSNEVALEDA NEDVESGT N AALENANEDTVEALIDTNE+V
Sbjct: 432 SQEAALEVANEDVVQSETSNEVALEDA-NEDVESGTPN-AALENANEDTVEALIDTNEEV 491
Query: 510 VQSETSYEVPLGNANEDAIQSKTSYEVAVEDATEDVVQSGTSEESALVDANEDVVQSGTS 569
VQ ETSYEVPLGN NEDA+QSKTS EVAV+DATEDVVQ+GTS ESALVDANEDVVQSGTS
Sbjct: 492 VQPETSYEVPLGNTNEDAVQSKTSNEVAVDDATEDVVQAGTS-ESALVDANEDVVQSGTS 551
Query: 570 IEAASVDANKD-VVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTMPQQPDSTTKASSI 629
E A++DANKD VVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTM QQPDSTTKASSI
Sbjct: 552 NETATIDANKDVVVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTMSQQPDSTTKASSI 610
Query: 630 DS 631
DS
Sbjct: 612 DS 610
BLAST of Lsi10G013990 vs. NCBI nr
Match:
XP_038901352.1 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X2 [Benincasa hispida])
HSP 1 Score: 1094.3 bits (2829), Expect = 0.0e+00
Identity = 570/602 (94.68%), Postives = 581/602 (96.51%), Query Frame = 0
Query: 30 NTMQLNNSNYGGLVPNSAFLGSRLKVGSRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL 89
N LNNSNYGGLVPNSAFLGSRLK SRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL
Sbjct: 12 NRTTLNNSNYGGLVPNSAFLGSRLKASSRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL 71
Query: 90 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 149
AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA
Sbjct: 72 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 131
Query: 150 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 209
PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 132 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 191
Query: 210 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRFGGATQYTVNNQMVNATL 269
ESGNAGEPAKL+RQRYREAADIIKKGKMCCLFINDLDAGAGR GG TQYTVNNQMVNATL
Sbjct: 192 ESGNAGEPAKLLRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATL 251
Query: 270 MNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 329
MNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG
Sbjct: 252 MNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 311
Query: 330 ICTGIFRTDGVPIEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVDSIGRNLV 389
ICTGIFRTD VPIEDI+KLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGV+SIGRNLV
Sbjct: 312 ICTGIFRTDDVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVESIGRNLV 371
Query: 390 NSKEGPPTFDEPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANEDVVQFET 449
NSKEGPPTFD+PKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDAN DVVQFET
Sbjct: 372 NSKEGPPTFDQPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANVDVVQFET 431
Query: 450 SQEAALEVANEDVVQSETSNEVALEDANNEDVESGTSNEAALENANEDTVEALIDTNEDV 509
SQEAALEVANEDVVQSETSNEVALEDA NEDVESGT N ALENANEDTVEALIDTNE+V
Sbjct: 432 SQEAALEVANEDVVQSETSNEVALEDA-NEDVESGTPN--ALENANEDTVEALIDTNEEV 491
Query: 510 VQSETSYEVPLGNANEDAIQSKTSYEVAVEDATEDVVQSGTSEESALVDANEDVVQSGTS 569
VQ ETSYEVPLGN NEDA+QSKTS EVAV+DATEDVVQ+GTS ESALVDANEDVVQSGTS
Sbjct: 492 VQPETSYEVPLGNTNEDAVQSKTSNEVAVDDATEDVVQAGTS-ESALVDANEDVVQSGTS 551
Query: 570 IEAASVDANKD-VVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTMPQQPDSTTKASSI 629
E A++DANKD VVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTM QQPDSTTKASSI
Sbjct: 552 NETATIDANKDVVVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTMSQQPDSTTKASSI 609
Query: 630 DS 631
DS
Sbjct: 612 DS 609
BLAST of Lsi10G013990 vs. NCBI nr
Match:
XP_038901356.1 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X6 [Benincasa hispida])
HSP 1 Score: 1090.5 bits (2819), Expect = 0.0e+00
Identity = 570/602 (94.68%), Postives = 581/602 (96.51%), Query Frame = 0
Query: 30 NTMQLNNSNYGGLVPNSAFLGSRLKVGSRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL 89
N LNNSNYGGLVPNSAFLGSRLK SRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL
Sbjct: 12 NRTTLNNSNYGGLVPNSAFLGSRLKASSRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL 71
Query: 90 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 149
AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA
Sbjct: 72 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 131
Query: 150 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 209
PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 132 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 191
Query: 210 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRFGGATQYTVNNQMVNATL 269
ESGNAGEPAKL+RQRYREAADIIKKGKMCCLFINDLDAGAGR GG TQYTVNNQMVNATL
Sbjct: 192 ESGNAGEPAKLLRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATL 251
Query: 270 MNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 329
MNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG
Sbjct: 252 MNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 311
Query: 330 ICTGIFRTDGVPIEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVDSIGRNLV 389
ICTGIFRTD VPIEDI+KLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGV+SIGRNLV
Sbjct: 312 ICTGIFRTDDVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVESIGRNLV 371
Query: 390 NSKEGPPTFDEPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANEDVVQFET 449
NSKEGPPTFD+PKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDAN DVVQFET
Sbjct: 372 NSKEGPPTFDQPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANVDVVQFET 431
Query: 450 SQEAALEVANEDVVQSETSNEVALEDANNEDVESGTSNEAALENANEDTVEALIDTNEDV 509
SQEAALEVANEDVVQSETSNEVALEDA NEDVESGT N AALENANEDTVEALIDTNE+V
Sbjct: 432 SQEAALEVANEDVVQSETSNEVALEDA-NEDVESGTPN-AALENANEDTVEALIDTNEEV 491
Query: 510 VQSETSYEVPLGNANEDAIQSKTSYEVAVEDATEDVVQSGTSEESALVDANEDVVQSGTS 569
VQ ETSYEVPLGN NEDA+QSKTS VAV+DATEDVVQ+GTS ESALVDANEDVVQSGTS
Sbjct: 492 VQPETSYEVPLGNTNEDAVQSKTS-NVAVDDATEDVVQAGTS-ESALVDANEDVVQSGTS 551
Query: 570 IEAASVDANKD-VVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTMPQQPDSTTKASSI 629
E A++DANKD VVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTM QQPDSTTKASSI
Sbjct: 552 NETATIDANKDVVVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTMSQQPDSTTKASSI 609
Query: 630 DS 631
DS
Sbjct: 612 DS 609
BLAST of Lsi10G013990 vs. NCBI nr
Match:
XP_038901354.1 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X4 [Benincasa hispida])
HSP 1 Score: 1090.1 bits (2818), Expect = 0.0e+00
Identity = 570/602 (94.68%), Postives = 581/602 (96.51%), Query Frame = 0
Query: 30 NTMQLNNSNYGGLVPNSAFLGSRLKVGSRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL 89
N LNNSNYGGLVPNSAFLGSRLK SRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL
Sbjct: 12 NRTTLNNSNYGGLVPNSAFLGSRLKASSRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL 71
Query: 90 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 149
AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA
Sbjct: 72 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 131
Query: 150 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 209
PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 132 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 191
Query: 210 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRFGGATQYTVNNQMVNATL 269
ESGNAGEPAKL+RQRYREAADIIKKGKMCCLFINDLDAGAGR GG TQYTVNNQMVNATL
Sbjct: 192 ESGNAGEPAKLLRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATL 251
Query: 270 MNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 329
MNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG
Sbjct: 252 MNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 311
Query: 330 ICTGIFRTDGVPIEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVDSIGRNLV 389
ICTGIFRTD VPIEDI+KLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGV+SIGRNLV
Sbjct: 312 ICTGIFRTDDVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVESIGRNLV 371
Query: 390 NSKEGPPTFDEPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANEDVVQFET 449
NSKEGPPTFD+PKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDAN DVVQFET
Sbjct: 372 NSKEGPPTFDQPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANVDVVQFET 431
Query: 450 SQEAALEVANEDVVQSETSNEVALEDANNEDVESGTSNEAALENANEDTVEALIDTNEDV 509
SQEAALEVANEDVVQSETSNEVALEDA NEDVESGT N AALENANEDTVEALIDTNE+V
Sbjct: 432 SQEAALEVANEDVVQSETSNEVALEDA-NEDVESGTPN-AALENANEDTVEALIDTNEEV 491
Query: 510 VQSETSYEVPLGNANEDAIQSKTSYEVAVEDATEDVVQSGTSEESALVDANEDVVQSGTS 569
VQ ETSY VPLGN NEDA+QSKTS EVAV+DATEDVVQ+GTS ESALVDANEDVVQSGTS
Sbjct: 492 VQPETSY-VPLGNTNEDAVQSKTSNEVAVDDATEDVVQAGTS-ESALVDANEDVVQSGTS 551
Query: 570 IEAASVDANKD-VVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTMPQQPDSTTKASSI 629
E A++DANKD VVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTM QQPDSTTKASSI
Sbjct: 552 NETATIDANKDVVVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTMSQQPDSTTKASSI 609
Query: 630 DS 631
DS
Sbjct: 612 DS 609
BLAST of Lsi10G013990 vs. NCBI nr
Match:
XP_038901353.1 (ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X3 [Benincasa hispida])
HSP 1 Score: 1090.1 bits (2818), Expect = 0.0e+00
Identity = 570/602 (94.68%), Postives = 581/602 (96.51%), Query Frame = 0
Query: 30 NTMQLNNSNYGGLVPNSAFLGSRLKVGSRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL 89
N LNNSNYGGLVPNSAFLGSRLK SRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL
Sbjct: 12 NRTTLNNSNYGGLVPNSAFLGSRLKASSRFTTSKMVIGNFKIVAEHDEEKQTEKDKWRGL 71
Query: 90 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 149
AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA
Sbjct: 72 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 131
Query: 150 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 209
PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 132 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 191
Query: 210 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRFGGATQYTVNNQMVNATL 269
ESGNAGEPAKL+RQRYREAADIIKKGKMCCLFINDLDAGAGR GG TQYTVNNQMVNATL
Sbjct: 192 ESGNAGEPAKLLRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATL 251
Query: 270 MNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 329
MNIADNPTNVQLPG+YNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG
Sbjct: 252 MNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 311
Query: 330 ICTGIFRTDGVPIEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVDSIGRNLV 389
ICTGIFRTD VPIEDI+KLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGV+SIGRNLV
Sbjct: 312 ICTGIFRTDDVPIEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVESIGRNLV 371
Query: 390 NSKEGPPTFDEPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANEDVVQFET 449
NSKEGPPTFD+PKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDAN DVVQFET
Sbjct: 372 NSKEGPPTFDQPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANVDVVQFET 431
Query: 450 SQEAALEVANEDVVQSETSNEVALEDANNEDVESGTSNEAALENANEDTVEALIDTNEDV 509
SQEAALEVANEDVVQSETSN VALEDA NEDVESGT N AALENANEDTVEALIDTNE+V
Sbjct: 432 SQEAALEVANEDVVQSETSN-VALEDA-NEDVESGTPN-AALENANEDTVEALIDTNEEV 491
Query: 510 VQSETSYEVPLGNANEDAIQSKTSYEVAVEDATEDVVQSGTSEESALVDANEDVVQSGTS 569
VQ ETSYEVPLGN NEDA+QSKTS EVAV+DATEDVVQ+GTS ESALVDANEDVVQSGTS
Sbjct: 492 VQPETSYEVPLGNTNEDAVQSKTSNEVAVDDATEDVVQAGTS-ESALVDANEDVVQSGTS 551
Query: 570 IEAASVDANKD-VVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTMPQQPDSTTKASSI 629
E A++DANKD VVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTM QQPDSTTKASSI
Sbjct: 552 NETATIDANKDVVVQSGTSYESMGEEERNKLISLFLKAVQIHLLKTMSQQPDSTTKASSI 609
Query: 630 DS 631
DS
Sbjct: 612 DS 609
BLAST of Lsi10G013990 vs. TAIR 10
Match:
AT2G39730.1 (rubisco activase )
HSP 1 Score: 669.1 bits (1725), Expect = 3.5e-192
Identity = 325/416 (78.12%), Postives = 365/416 (87.74%), Query Frame = 0
Query: 32 MQLNNSNYGGL-VPNSAFLGSRLKVGSRFTTS-KMVIGNFKIVAEHDEEKQTEKDKWRGL 91
+ LN S G + P S FLG ++ SRF S K G+FK++A E+KQT+ D+WRGL
Sbjct: 16 LSLNGSGSGAVSAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLAV-KEDKQTDGDRWRGL 75
Query: 92 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 151
A+DTSDDQQDITRGKG+ D +FQAPMGTGTH+AV+SSYEY+S GLR+YN DN +DGFYIA
Sbjct: 76 AYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIA 135
Query: 152 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 211
PAFMDKL+VHI KNFL LPNIKVPLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGEL
Sbjct: 136 PAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGEL 195
Query: 212 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRFGGATQYTVNNQMVNATL 271
ESGNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGR GG TQYTVNNQMVNATL
Sbjct: 196 ESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATL 255
Query: 272 MNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 331
MNIADNPTNVQLPG+YNKEEN RVPII TGNDFSTLYAPLIRDGRM+KFYWAPTREDRIG
Sbjct: 256 MNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIG 315
Query: 332 ICTGIFRTDGVPIEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVDSIGRNLV 391
+C GIFRTD + EDI+ LVD FPGQSIDFFGALRARVYDDEVRK+ +GV+ IG+ LV
Sbjct: 316 VCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLV 375
Query: 392 NSKEGPPTFDEPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANEDVV 446
NS+EGPP F++P+MT EKL+EYGNML+MEQENVKRV+LA+ YL++AALGDAN D +
Sbjct: 376 NSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAI 430
BLAST of Lsi10G013990 vs. TAIR 10
Match:
AT2G39730.2 (rubisco activase )
HSP 1 Score: 669.1 bits (1725), Expect = 3.5e-192
Identity = 325/416 (78.12%), Postives = 365/416 (87.74%), Query Frame = 0
Query: 32 MQLNNSNYGGL-VPNSAFLGSRLKVGSRFTTS-KMVIGNFKIVAEHDEEKQTEKDKWRGL 91
+ LN S G + P S FLG ++ SRF S K G+FK++A E+KQT+ D+WRGL
Sbjct: 16 LSLNGSGSGAVSAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLAV-KEDKQTDGDRWRGL 75
Query: 92 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 151
A+DTSDDQQDITRGKG+ D +FQAPMGTGTH+AV+SSYEY+S GLR+YN DN +DGFYIA
Sbjct: 76 AYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIA 135
Query: 152 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 211
PAFMDKL+VHI KNFL LPNIKVPLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGEL
Sbjct: 136 PAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGEL 195
Query: 212 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRFGGATQYTVNNQMVNATL 271
ESGNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGR GG TQYTVNNQMVNATL
Sbjct: 196 ESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATL 255
Query: 272 MNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 331
MNIADNPTNVQLPG+YNKEEN RVPII TGNDFSTLYAPLIRDGRM+KFYWAPTREDRIG
Sbjct: 256 MNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIG 315
Query: 332 ICTGIFRTDGVPIEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVDSIGRNLV 391
+C GIFRTD + EDI+ LVD FPGQSIDFFGALRARVYDDEVRK+ +GV+ IG+ LV
Sbjct: 316 VCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLV 375
Query: 392 NSKEGPPTFDEPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANEDVV 446
NS+EGPP F++P+MT EKL+EYGNML+MEQENVKRV+LA+ YL++AALGDAN D +
Sbjct: 376 NSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAI 430
BLAST of Lsi10G013990 vs. TAIR 10
Match:
AT2G39730.3 (rubisco activase )
HSP 1 Score: 669.1 bits (1725), Expect = 3.5e-192
Identity = 325/416 (78.12%), Postives = 365/416 (87.74%), Query Frame = 0
Query: 32 MQLNNSNYGGL-VPNSAFLGSRLKVGSRFTTS-KMVIGNFKIVAEHDEEKQTEKDKWRGL 91
+ LN S G + P S FLG ++ SRF S K G+FK++A E+KQT+ D+WRGL
Sbjct: 16 LSLNGSGSGAVSAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLAV-KEDKQTDGDRWRGL 75
Query: 92 AFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVMSSYEYISAGLREYNFDNSVDGFYIA 151
A+DTSDDQQDITRGKG+ D +FQAPMGTGTH+AV+SSYEY+S GLR+YN DN +DGFYIA
Sbjct: 76 AYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIA 135
Query: 152 PAFMDKLMVHIVKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 211
PAFMDKL+VHI KNFL LPNIKVPLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGEL
Sbjct: 136 PAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGEL 195
Query: 212 ESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRFGGATQYTVNNQMVNATL 271
ESGNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGR GG TQYTVNNQMVNATL
Sbjct: 196 ESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATL 255
Query: 272 MNIADNPTNVQLPGLYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG 331
MNIADNPTNVQLPG+YNKEEN RVPII TGNDFSTLYAPLIRDGRM+KFYWAPTREDRIG
Sbjct: 256 MNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIG 315
Query: 332 ICTGIFRTDGVPIEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVDSIGRNLV 391
+C GIFRTD + EDI+ LVD FPGQSIDFFGALRARVYDDEVRK+ +GV+ IG+ LV
Sbjct: 316 VCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLV 375
Query: 392 NSKEGPPTFDEPKMTLEKLLEYGNMLIMEQENVKRVKLADKYLNEAALGDANEDVV 446
NS+EGPP F++P+MT EKL+EYGNML+MEQENVKRV+LA+ YL++AALGDAN D +
Sbjct: 376 NSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAI 430
BLAST of Lsi10G013990 vs. TAIR 10
Match:
AT1G73110.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )
HSP 1 Score: 326.6 bits (836), Expect = 4.3e-89
Identity = 164/301 (54.49%), Postives = 220/301 (73.09%), Query Frame = 0
Query: 138 NFDNSVDGFYIAPAFMDKLMVHIVKNFLNLP-NIKVPLILGIWGGKGQGKSFQCELVFAK 197
+F++ +YIAP+F+DK+ VHIVKN+L NIK+PLILGIWGGKGQGK+FQ EL+F
Sbjct: 128 SFEHLQGDYYIAPSFLDKVAVHIVKNYLAPSLNIKIPLILGIWGGKGQGKTFQTELIFKT 187
Query: 198 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIK-KGKMCCLFINDLDAGAGRFGGA 257
MG+ P++MSAGELES AGEP +LIR RYR A+ +I+ +GKM L IND+DAG GRF G
Sbjct: 188 MGVEPVIMSAGELESDRAGEPGRLIRDRYRTASQVIQNQGKMSVLMINDIDAGLGRF-GE 247
Query: 258 TQYTVNNQMVNATLMNIADNPTNVQLPGLYNKEEN-PRVPIIVTGNDFSTLYAPLIRDGR 317
TQ TVNNQ+V TLMN+ADNPT V + + + + RVP+IVTGNDFSTLYAPLIR+GR
Sbjct: 248 TQMTVNNQIVVGTLMNLADNPTRVSVGQEWREADMVNRVPLIVTGNDFSTLYAPLIREGR 307
Query: 318 MDKFYWAPTREDRIGICTGIFRTDGVPIEDIIKLVDTFPGQSIDFFGALRARVYDDEVRK 377
M+KFYW PTRED + I + ++ DG+ +D+I +VD FP Q++DF+GALR+R YD + K
Sbjct: 308 MEKFYWQPTREDIVNIVSRMYEKDGISRKDVISIVDKFPNQALDFYGALRSRTYDRSILK 367
Query: 378 WA-VGVGVDSIGRNLVNSK--EGPPTFDEPKMTLEKLLEYGNMLIMEQENVKRVKLADKY 433
W G++++G+ L+ K + P F P+ T+E LLE G LI EQ+ + KL+ +Y
Sbjct: 368 WVDEAGGMETLGKVLLRRKKTQEVPQFTAPEQTVEALLESGYSLINEQKLIMETKLSKEY 427
BLAST of Lsi10G013990 vs. TAIR 10
Match:
AT2G03670.1 (cell division cycle 48B )
HSP 1 Score: 50.8 bits (120), Expect = 4.6e-06
Identity = 41/163 (25.15%), Postives = 71/163 (43.56%), Query Frame = 0
Query: 170 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 229
+K P L ++G G GK+ V + + I++S + +AGE K++R+ + EA+
Sbjct: 53 LKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEAS 112
Query: 230 DIIKKGKMCCLFINDLDAGAGRFGGATQYTVNNQMVNATLMNIADNPTNVQLPGLYNKEE 289
K +FI+++D R + V TLM+ ++ P++
Sbjct: 113 SHAVSDKPSVIFIDEIDVLCPRRDARREQDVRIASQLFTLMD-SNKPSS----------S 172
Query: 290 NPRVPIIVTGNDFSTLYAPLIRDGRMDKF--YWAPTREDRIGI 331
PRV ++ + N + L R GR D P EDR+ I
Sbjct: 173 APRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKI 204
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q01587 | 5.4e-222 | 93.72 | Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis s... | [more] |
Q40281 | 3.3e-203 | 82.49 | Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus dom... | [more] |
Q7X999 | 1.4e-198 | 81.29 | Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea ... | [more] |
O98997 | 1.0e-196 | 80.24 | Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Vigna rad... | [more] |
O64981 | 1.1e-195 | 79.29 | Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3CKP1 | 2.3e-308 | 91.51 | ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X1 O... | [more] |
C5J0I3 | 5.2e-308 | 91.86 | Chloroplast rubisco activase OS=Cucumis sativus OX=3659 GN=rca PE=2 SV=1 | [more] |
A0A0A0KH85 | 9.7e-307 | 91.86 | ATPase_AAA_core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G18... | [more] |
A0A1S3CL51 | 1.7e-306 | 91.35 | ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X2 O... | [more] |
A0A1S4E4J7 | 1.7e-306 | 91.35 | ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X3 O... | [more] |
Match Name | E-value | Identity | Description | |
XP_038901350.1 | 0.0e+00 | 94.85 | ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X1 [... | [more] |
XP_038901352.1 | 0.0e+00 | 94.68 | ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X2 [... | [more] |
XP_038901356.1 | 0.0e+00 | 94.68 | ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X6 [... | [more] |
XP_038901354.1 | 0.0e+00 | 94.68 | ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X4 [... | [more] |
XP_038901353.1 | 0.0e+00 | 94.68 | ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X3 [... | [more] |