Lsi10G011650 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G011650
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	CEN-like protein 2
Location	chr10: 15920571 .. 15921918 (+)
RNA-Seq Expression	Lsi10G011650
Synteny	Lsi10G011650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATTAACTAACTCTCTCTCAACCCCAACCACCTTTGAAATCTCAACATTCTTCTTCTTCTTCTTTTTCTATGGCAGTGGCGAAGATGTCGTCGGATCCTCTCGTTATCGGAGGTGTGGTCGGAGATGTCGTCGACGCCTTCTGCCCGACGGTAAAGATGACGGTCACTTACCATTCAAATAAGAAGGTGTGCAATGGCCATGAGTTGCTTCCAAATTTTGTAACCCTAAAACCTAAGGTTGAGGTTCTTGGAGGTGACCTTAGATCCTTCTTCACACTGGTCTGATCACATTCAATTACACCCATCTTCTCATTTTCTTTTATATATATATATATATATATAATGCTATTCATCACTTATATAAATTTCCAATTAATTTTTCAGGTCATGACTGATCCAGATGTTCCTGGTCCTAGTGATCCTTACTTGAGAGAGCACCTCCACTGGTATCATCTTCTTTCATCAAACTCCCATTTGGAAGGGTGTAAAAATGAATCCTAATTTTCAAATATATACATATGTATTTTTTATTTTTAATGTGAATTGAACTATGTTAAAGTTAATCATTTTTTTTTTCCAGAAAAAAATCGTACACTACATGGATTAGGAGATTTGAACCTCTAACCTTTTAAGAGAAACAGTAGAACTGGCTAAAAACATACTTTTTTGTTAAAATGTCTTGAATTTATTATCTAATGATCTGAATGACTAAGCATATGTCTCGAGTTTAGAGATGTGTGCTATATATAAACTCTCTAATCTTAGAGTTGCCTCTCTAATATATTTCTCTATGTTAAAAACTGACCTCTCTTTGTCCATAGACGACATGGCTAAAATACTGTTAGTGAATCACATAAATTTCTATGTTGATCTTTACCGTTTATGAATTCTCGTTTACTTTATTTGCCGATTTCCTAACCGTTTTTATATGATCATATGTGTATAACTAATAAAATTTGGATATAACTGTGATTTTTCAGGATAGTTACAGACATCCCAGGAACAACAGATGCCACTTTTGGTAAACCCCAATTTTGTTGTTGTATTTTTTTCTCCTAATTTGGGTTTATTTATTGGAATTTAATGAGAATAATAATTGTTAAAATAGGAAAAGAAGTAGTGAAATATGAAGTTCCAAGTCCCAACATAGGGATTCACAGATTTGTGTTCCTATTGTACAAGCAAAAACGAAGGCAAACAGTGAAGCCACCTCATCCTTCAACTTCAAGAGATGGTTTTAATGCAAGAAAATTTGCACAAGACAATGATCTTTCCCTTCCTGTTGCTGCTGTCTATTTCAATGCTCAAAGGGCTACAGCCGCCAGAAGAAGATAGTAATAATATTT

mRNA sequence

CAAATTAACTAACTCTCTCTCAACCCCAACCACCTTTGAAATCTCAACATTCTTCTTCTTCTTCTTTTTCTATGGCAGTGGCGAAGATGTCGTCGGATCCTCTCGTTATCGGAGGTGTGGTCGGAGATGTCGTCGACGCCTTCTGCCCGACGGTAAAGATGACGGTCACTTACCATTCAAATAAGAAGGTGTGCAATGGCCATGAGTTGCTTCCAAATTTTGTAACCCTAAAACCTAAGGTTGAGGTTCTTGGAGGTGACCTTAGATCCTTCTTCACACTGGTCATGACTGATCCAGATGTTCCTGGTCCTAGTGATCCTTACTTGAGAGAGCACCTCCACTGGTATCATCTTCTTTCATCAAACTCCCATTTGGAAGGGTACATCCCAGGAACAACAGATGCCACTTTTGGAAAAGAAGTAGTGAAATATGAAGTTCCAAGTCCCAACATAGGGATTCACAGATTTGTGTTCCTATTGTACAAGCAAAAACGAAGGCAAACAGTGAAGCCACCTCATCCTTCAACTTCAAGAGATGGTTTTAATGCAAGAAAATTTGCACAAGACAATGATCTTTCCCTTCCTGTTGCTGCTGTCTATTTCAATGCTCAAAGGGCTACAGCCGCCAGAAGAAGATAGTAATAATATTT

Coding sequence (CDS)

ATGGCAGTGGCGAAGATGTCGTCGGATCCTCTCGTTATCGGAGGTGTGGTCGGAGATGTCGTCGACGCCTTCTGCCCGACGGTAAAGATGACGGTCACTTACCATTCAAATAAGAAGGTGTGCAATGGCCATGAGTTGCTTCCAAATTTTGTAACCCTAAAACCTAAGGTTGAGGTTCTTGGAGGTGACCTTAGATCCTTCTTCACACTGGTCATGACTGATCCAGATGTTCCTGGTCCTAGTGATCCTTACTTGAGAGAGCACCTCCACTGGTATCATCTTCTTTCATCAAACTCCCATTTGGAAGGGTACATCCCAGGAACAACAGATGCCACTTTTGGAAAAGAAGTAGTGAAATATGAAGTTCCAAGTCCCAACATAGGGATTCACAGATTTGTGTTCCTATTGTACAAGCAAAAACGAAGGCAAACAGTGAAGCCACCTCATCCTTCAACTTCAAGAGATGGTTTTAATGCAAGAAAATTTGCACAAGACAATGATCTTTCCCTTCCTGTTGCTGCTGTCTATTTCAATGCTCAAAGGGCTACAGCCGCCAGAAGAAGATAG

Protein sequence

MAVAKMSSDPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGGDLRSFFTLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKYEVPSPNIGIHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQRATAARRR

Homology

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BLAST of Lsi10G011650 vs. ExPASy Swiss-Prot
Match: Q41261 (Protein CENTRORADIALIS OS=Antirrhinum majus OX=4151 GN=CEN PE=1 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 7.4e-66
Identity = 127/188 (67.55%), Postives = 144/188 (76.60%), Query Frame = 0


Query: 4   AKMSSDPLVIGGVVGDVVDAFCPTVKMTVTYHSN---KKVCNGHELLPNFVTLKPKVEVL 63
           AK+SSDPLVIG V+GDVVD F  TVKM+V Y+SN   K V NGHEL P+ VT  P+VEV 
Sbjct: 3   AKVSSDPLVIGRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEVH 62

Query: 64  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKY 123
           GGD+RSFFTL+MTDPDVPGPSDPYLREHLHW         +   IPGTTD++FGKEVV Y
Sbjct: 63  GGDMRSFFTLIMTDPDVPGPSDPYLREHLHW---------IVTDIPGTTDSSFGKEVVSY 122

Query: 124 EVPSPNIGIHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQ 183
           E+P PNIGIHRFVFLL+KQK+R       P   RDGFN RKF Q+N+L LPVAAV+FN Q
Sbjct: 123 EMPRPNIGIHRFVFLLFKQKKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNCQ 181

Query: 184 RATAARRR 189
           R TAARRR
Sbjct: 183 RETAARRR 181

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BLAST of Lsi10G011650 vs. ExPASy Swiss-Prot
Match: Q9XH43 (CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.4e-64
Identity = 123/181 (67.96%), Postives = 143/181 (79.01%), Query Frame = 0


Query: 8   SDPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGGDLRSF 67
           SDPLVIG V+G+VVD F P+VKM+VTY+S+K V NGHEL P+ VT KP+VEV GGDLRSF
Sbjct: 6   SDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDLRSF 65

Query: 68  FTLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKYEVPSPNI 127
           FT++M DPDVPGPSDPYLREHLHW         +   IPGTTD +FGKE+V YE+P PNI
Sbjct: 66  FTMIMIDPDVPGPSDPYLREHLHW---------IVTDIPGTTDCSFGKEIVGYEMPRPNI 125

Query: 128 GIHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQRATAARR 187
           GIHRFVFLL+KQK+RQTV       SRD FN RKFA++N+L  PVAAV+FN QR TAARR
Sbjct: 126 GIHRFVFLLFKQKKRQTVLT--APLSRDRFNTRKFAEENELGSPVAAVFFNCQRETAARR 175

Query: 188 R 189
           R
Sbjct: 186 R 175

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BLAST of Lsi10G011650 vs. ExPASy Swiss-Prot
Match: Q9ZNV5 (Protein CENTRORADIALIS-like OS=Arabidopsis thaliana OX=3702 GN=CEN PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 6.9e-64
Identity = 122/186 (65.59%), Postives = 145/186 (77.96%), Query Frame = 0


Query: 3   VAKMSSDPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG 62
           +A++SSDPL++G V+GDVVD     VKMTVTY+S+K+V NGHEL P+ VT KPKVEV GG
Sbjct: 1   MARISSDPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGG 60

Query: 63  DLRSFFTLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKYEV 122
           D+RSFFTLVMTDPDVPGPSDPYLREHLHW         +   IPGTTD +FGKE++ YE+
Sbjct: 61  DMRSFFTLVMTDPDVPGPSDPYLREHLHW---------IVTDIPGTTDVSFGKEIIGYEM 120

Query: 123 PSPNIGIHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQRA 182
           P PNIGIHRFV+LL+KQ RR +V      + RD FN R+FA +NDL LPVAAV+FN QR 
Sbjct: 121 PRPNIGIHRFVYLLFKQTRRGSV--VSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRE 175

Query: 183 TAARRR 189
           TAARRR
Sbjct: 181 TAARRR 175

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BLAST of Lsi10G011650 vs. ExPASy Swiss-Prot
Match: O82088 (Protein SELF-PRUNING OS=Solanum lycopersicum OX=4081 GN=SP PE=2 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.5e-63
Identity = 119/186 (63.98%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 3   VAKMSSDPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG 62
           +A    +PLVIG V+G+VVD FCP+VKM+V Y++NK V NGHE  P+ VT KP+VEV GG
Sbjct: 1   MASKMCEPLVIGRVIGEVVDYFCPSVKMSVVYNNNKHVYNGHEFFPSSVTSKPRVEVHGG 60

Query: 63  DLRSFFTLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKYEV 122
           DLRSFFTL+M DPDVPGPSDPYLREHLHW         +   IPGTTD +FG+EVV YE+
Sbjct: 61  DLRSFFTLIMIDPDVPGPSDPYLREHLHW---------IVTDIPGTTDCSFGREVVGYEM 120

Query: 123 PSPNIGIHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQRA 182
           P PNIGIHRFVFLL+KQK+RQT+       SRD F++RKF+++N+L  PVAAV+FN QR 
Sbjct: 121 PRPNIGIHRFVFLLFKQKKRQTIS--SAPVSRDQFSSRKFSEENELGSPVAAVFFNCQRE 175

Query: 183 TAARRR 189
           TAARRR
Sbjct: 181 TAARRR 175

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BLAST of Lsi10G011650 vs. ExPASy Swiss-Prot
Match: Q9XH42 (CEN-like protein 4 OS=Nicotiana tabacum OX=4097 GN=CET4 PE=2 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 3.4e-63
Identity = 120/181 (66.30%), Postives = 142/181 (78.45%), Query Frame = 0


Query: 8   SDPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGGDLRSF 67
           SDPLVIG V+G+VVD F P+VKM+VTY+S+K V NGHEL P+ VT KP+VEV GGDLRSF
Sbjct: 6   SDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDLRSF 65

Query: 68  FTLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKYEVPSPNI 127
           FTL+M DPDVPGPSDPYLREHLHW         +   IPGTTD +FG+E+V YE+P PNI
Sbjct: 66  FTLIMIDPDVPGPSDPYLREHLHW---------IVTDIPGTTDCSFGREIVGYEMPRPNI 125

Query: 128 GIHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQRATAARR 187
           GIHRFVFLL+KQK+RQT+       SRD FN RKF+++N+L  PVAA +FN QR TAARR
Sbjct: 126 GIHRFVFLLFKQKKRQTLL--SAPLSRDRFNTRKFSEENELGSPVAAAFFNCQRETAARR 175

Query: 188 R 189
           R
Sbjct: 186 R 175

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BLAST of Lsi10G011650 vs. ExPASy TrEMBL
Match: A0A1S3C8A7 (CEN-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103497942 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.3e-81
Identity = 156/188 (82.98%), Postives = 163/188 (86.70%), Query Frame = 0


Query: 1   MAVAKMSSDPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVL 60
           MA+ KM SDPLV+GGVVGDVVDA  PTVKMTVTYHSNKKVCNGHELLPNFVTLKP+VEVL
Sbjct: 1   MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPRVEVL 60

Query: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKY 120
           GGDLRSFFTLVMTDPDVPGPSDPYLREHLHW         +   IPGTTDATFGKE+VKY
Sbjct: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHW---------MVTDIPGTTDATFGKEIVKY 120

Query: 121 EVPSPNIGIHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQ 180
           E P PNIGIHR+VFLLYKQKRRQTVKPP P  SRDGFN+RKFA DN LSLPVAAVYF AQ
Sbjct: 121 EEPCPNIGIHRYVFLLYKQKRRQTVKPP-PQPSRDGFNSRKFALDNHLSLPVAAVYFIAQ 178

Query: 181 RATAARRR 189
           R TAARRR
Sbjct: 181 RPTAARRR 178

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BLAST of Lsi10G011650 vs. ExPASy TrEMBL
Match: A0A0A0KB52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152360 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.7e-81
Identity = 156/186 (83.87%), Postives = 162/186 (87.10%), Query Frame = 0


Query: 3   VAKMSSDPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG 62
           + KM SDPLV+GGVVGDVVDA  PTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG
Sbjct: 1   MGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG 60

Query: 63  DLRSFFTLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKYEV 122
           DLRSFFTLVMTDPDVPGPSDPYLREHLHW         +   IPGTTDATFGKE+VKYE 
Sbjct: 61  DLRSFFTLVMTDPDVPGPSDPYLREHLHW---------IVTDIPGTTDATFGKEIVKYEE 120

Query: 123 PSPNIGIHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQRA 182
           PSPNIGIHR+VFLLYKQKRRQTVKPP P  SRDGFN+RKFA DN LSLPVAAVYF AQR 
Sbjct: 121 PSPNIGIHRYVFLLYKQKRRQTVKPP-PHPSRDGFNSRKFALDNHLSLPVAAVYFIAQRP 176

Query: 183 TAARRR 189
           TAARRR
Sbjct: 181 TAARRR 176

[Close]

BLAST of Lsi10G011650 vs. ExPASy TrEMBL
Match: B9ZYL5 (TFL1-like protein OS=Cucumis sativus OX=3659 GN=CsTFL1d PE=2 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.5e-81
Identity = 156/188 (82.98%), Postives = 162/188 (86.17%), Query Frame = 0


Query: 1   MAVAKMSSDPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVL 60
           MA+ KM SDPLV+GGVVGDVVDA  PTVKMTVTYHS KKVCNGHELLPNFVTLKPKVEVL
Sbjct: 1   MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSYKKVCNGHELLPNFVTLKPKVEVL 60

Query: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKY 120
           GGDLRSFFTLVMTDPDVPGPSDPYLREHLHW         +   IPGTTDATFGKE+VKY
Sbjct: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHW---------IVTDIPGTTDATFGKEIVKY 120

Query: 121 EVPSPNIGIHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQ 180
           E PSPNIG HR+VFLLYKQKRRQTVKPP P  SRDGFN+RKFA DN LSLPVAAVYF AQ
Sbjct: 121 EEPSPNIGTHRYVFLLYKQKRRQTVKPP-PHPSRDGFNSRKFALDNHLSLPVAAVYFIAQ 178

Query: 181 RATAARRR 189
           R TAARRR
Sbjct: 181 RPTAARRR 178

[Close]

BLAST of Lsi10G011650 vs. ExPASy TrEMBL
Match: A0A6J1DHW3 (CEN-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111020644 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.1e-80
Identity = 155/186 (83.33%), Postives = 163/186 (87.63%), Query Frame = 0


Query: 3   VAKMSSDPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG 62
           +A   SDPLV+G V+GDVVDAF PTVKMTVTYHSNKKVCNGHELLP FVTLKPKVEVLGG
Sbjct: 1   MAASMSDPLVVGRVIGDVVDAFSPTVKMTVTYHSNKKVCNGHELLPTFVTLKPKVEVLGG 60

Query: 63  DLRSFFTLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKYEV 122
           DLRSFFTLVMTDPDVPGPSDPYLREHLHW         +   IPGTTD++FGKEVVKYEV
Sbjct: 61  DLRSFFTLVMTDPDVPGPSDPYLREHLHW---------IVTDIPGTTDSSFGKEVVKYEV 120

Query: 123 PSPNIGIHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQRA 182
           PSPNIGIHRFVFLL+KQKRRQTVK   P+ SRDGFNARKFAQDNDL LPVAAVYFNAQRA
Sbjct: 121 PSPNIGIHRFVFLLFKQKRRQTVK-DLPANSRDGFNARKFAQDNDLGLPVAAVYFNAQRA 176

Query: 183 TAARRR 189
           TAARRR
Sbjct: 181 TAARRR 176

[Close]

BLAST of Lsi10G011650 vs. ExPASy TrEMBL
Match: A0A6J1FY68 (CEN-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111448384 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.4e-80
Identity = 153/186 (82.26%), Postives = 163/186 (87.63%), Query Frame = 0


Query: 3   VAKMSSDPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG 62
           +AKM SDPLV+G VVGDV+DAF PTVKMTVTYHSNKKV NGHELLPNF+TLKPKVEV GG
Sbjct: 1   MAKM-SDPLVVGRVVGDVIDAFSPTVKMTVTYHSNKKVSNGHELLPNFITLKPKVEVFGG 60

Query: 63  DLRSFFTLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKYEV 122
           DLRSFFTLVMTDPDVPGPSDPYLREHLHW         +   IPGTTD+TFGKEVVKYEV
Sbjct: 61  DLRSFFTLVMTDPDVPGPSDPYLREHLHW---------IVTDIPGTTDSTFGKEVVKYEV 120

Query: 123 PSPNIGIHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQRA 182
           PSPN+GIHRFVFLLYKQ RRQTVKPP  S SRDGFNAR+FA++N L LPVAAVYFNAQRA
Sbjct: 121 PSPNVGIHRFVFLLYKQARRQTVKPPAASASRDGFNARRFAEENGLGLPVAAVYFNAQRA 176

Query: 183 TAARRR 189
           TAARRR
Sbjct: 181 TAARRR 176

[Close]

BLAST of Lsi10G011650 vs. NCBI nr
Match: XP_038902549.1 (CEN-like protein 2 [Benincasa hispida])

HSP 1 Score: 342.4 bits (877), Expect = 2.4e-90
Identity = 168/188 (89.36%), Postives = 172/188 (91.49%), Query Frame = 0


Query: 1   MAVAKMSSDPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVL 60
           MAVAKMSSDPLV+GGV+GDVVDAF PTVKM VTYHSNKKVCNGHELLPNFVTLKPKVEVL
Sbjct: 35  MAVAKMSSDPLVVGGVIGDVVDAFSPTVKMMVTYHSNKKVCNGHELLPNFVTLKPKVEVL 94

Query: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKY 120
           GGDLRSFFTLVMTDPDVPGPSDPYLREHLHW         +   IPGTTDATFGKE+VKY
Sbjct: 95  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHW---------MVTDIPGTTDATFGKEIVKY 154

Query: 121 EVPSPNIGIHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQ 180
           EVPSPNIGIHRFVFLLYKQKRRQTVKPPHPSTSRDGFN RKFA DNDLSLPVAAVYFNAQ
Sbjct: 155 EVPSPNIGIHRFVFLLYKQKRRQTVKPPHPSTSRDGFNTRKFALDNDLSLPVAAVYFNAQ 213

Query: 181 RATAARRR 189
           RATAARRR
Sbjct: 215 RATAARRR 213

[Close]

BLAST of Lsi10G011650 vs. NCBI nr
Match: KAE8646911.1 (hypothetical protein Csa_021030 [Cucumis sativus])

HSP 1 Score: 315.1 bits (806), Expect = 4.1e-82
Identity = 158/188 (84.04%), Postives = 164/188 (87.23%), Query Frame = 0


Query: 1   MAVAKMSSDPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVL 60
           MA+ KM SDPLV+GGVVGDVVDA  PTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVL
Sbjct: 1   MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVL 60

Query: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKY 120
           GGDLRSFFTLVMTDPDVPGPSDPYLREHLHW         +   IPGTTDATFGKE+VKY
Sbjct: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHW---------IVTDIPGTTDATFGKEIVKY 120

Query: 121 EVPSPNIGIHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQ 180
           E PSPNIGIHR+VFLLYKQKRRQTVKPP P  SRDGFN+RKFA DN LSLPVAAVYF AQ
Sbjct: 121 EEPSPNIGIHRYVFLLYKQKRRQTVKPP-PHPSRDGFNSRKFALDNHLSLPVAAVYFIAQ 178

Query: 181 RATAARRR 189
           R TAARRR
Sbjct: 181 RPTAARRR 178

[Close]

BLAST of Lsi10G011650 vs. NCBI nr
Match: KAG6570484.1 (CEN-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 312.4 bits (799), Expect = 2.7e-81
Identity = 155/188 (82.45%), Postives = 165/188 (87.77%), Query Frame = 0


Query: 1   MAVAKMSSDPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVL 60
           M +AKM SDPLV+G VVGDV+DAF PTVKMTVTYHSNKKV NGHELLPNF+TLKPKVEVL
Sbjct: 1   MVMAKM-SDPLVVGRVVGDVIDAFSPTVKMTVTYHSNKKVSNGHELLPNFITLKPKVEVL 60

Query: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKY 120
           GGDLRSFFTLVMTDPDVPGPSDPYLREHLHW         +   IPGTTD+TFGKEVVKY
Sbjct: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHW---------IVTDIPGTTDSTFGKEVVKY 120

Query: 121 EVPSPNIGIHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQ 180
           EVPSPN+GIHRFVFLLYKQ RRQTVKPP  S SRDGFNAR+FA++N L LPVAAVYFNAQ
Sbjct: 121 EVPSPNVGIHRFVFLLYKQARRQTVKPPAASASRDGFNARRFAEENGLGLPVAAVYFNAQ 178

Query: 181 RATAARRR 189
           RATAARRR
Sbjct: 181 RATAARRR 178

[Close]

BLAST of Lsi10G011650 vs. NCBI nr
Match: XP_008458582.1 (PREDICTED: CEN-like protein 2 [Cucumis melo])

HSP 1 Score: 312.4 bits (799), Expect = 2.7e-81
Identity = 156/188 (82.98%), Postives = 163/188 (86.70%), Query Frame = 0


Query: 1   MAVAKMSSDPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVL 60
           MA+ KM SDPLV+GGVVGDVVDA  PTVKMTVTYHSNKKVCNGHELLPNFVTLKP+VEVL
Sbjct: 1   MAMGKMPSDPLVVGGVVGDVVDAISPTVKMTVTYHSNKKVCNGHELLPNFVTLKPRVEVL 60

Query: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKY 120
           GGDLRSFFTLVMTDPDVPGPSDPYLREHLHW         +   IPGTTDATFGKE+VKY
Sbjct: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHW---------MVTDIPGTTDATFGKEIVKY 120

Query: 121 EVPSPNIGIHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQ 180
           E P PNIGIHR+VFLLYKQKRRQTVKPP P  SRDGFN+RKFA DN LSLPVAAVYF AQ
Sbjct: 121 EEPCPNIGIHRYVFLLYKQKRRQTVKPP-PQPSRDGFNSRKFALDNHLSLPVAAVYFIAQ 178

Query: 181 RATAARRR 189
           R TAARRR
Sbjct: 181 RPTAARRR 178

[Close]

BLAST of Lsi10G011650 vs. NCBI nr
Match: XP_023512960.1 (CEN-like protein 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311.6 bits (797), Expect = 4.6e-81
Identity = 155/188 (82.45%), Postives = 165/188 (87.77%), Query Frame = 0


Query: 1   MAVAKMSSDPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVL 60
           MA+AKM SDPLV+G VVGDV+DAF PTVKMTVTYHSNKKV NGHELLPN +TLKPKVEVL
Sbjct: 1   MAMAKM-SDPLVVGRVVGDVIDAFSPTVKMTVTYHSNKKVSNGHELLPNLITLKPKVEVL 60

Query: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKY 120
           GGDLRSFFTLVMTDPDVPGPSDPYLREHLHW         +   IPGTTD+TFGKEVVKY
Sbjct: 61  GGDLRSFFTLVMTDPDVPGPSDPYLREHLHW---------IVTDIPGTTDSTFGKEVVKY 120

Query: 121 EVPSPNIGIHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQ 180
           EVPSPN+GIHRFVFLLYKQ RRQTVKPP  S SRDGFNAR+FA++N L LPVAAVYFNAQ
Sbjct: 121 EVPSPNVGIHRFVFLLYKQTRRQTVKPPAASASRDGFNARRFAEENGLGLPVAAVYFNAQ 178

Query: 181 RATAARRR 189
           RATAARRR
Sbjct: 181 RATAARRR 178

[Close]

BLAST of Lsi10G011650 vs. TAIR 10
Match: AT2G27550.1 (centroradialis )

HSP 1 Score: 245.0 bits (624), Expect = 4.9e-65
Identity = 122/186 (65.59%), Postives = 145/186 (77.96%), Query Frame = 0


Query: 3   VAKMSSDPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGG 62
           +A++SSDPL++G V+GDVVD     VKMTVTY+S+K+V NGHEL P+ VT KPKVEV GG
Sbjct: 1   MARISSDPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGG 60

Query: 63  DLRSFFTLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKYEV 122
           D+RSFFTLVMTDPDVPGPSDPYLREHLHW         +   IPGTTD +FGKE++ YE+
Sbjct: 61  DMRSFFTLVMTDPDVPGPSDPYLREHLHW---------IVTDIPGTTDVSFGKEIIGYEM 120

Query: 123 PSPNIGIHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQRA 182
           P PNIGIHRFV+LL+KQ RR +V      + RD FN R+FA +NDL LPVAAV+FN QR 
Sbjct: 121 PRPNIGIHRFVYLLFKQTRRGSV--VSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRE 175

Query: 183 TAARRR 189
           TAARRR
Sbjct: 181 TAARRR 175

[Close]

BLAST of Lsi10G011650 vs. TAIR 10
Match: AT5G03840.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 232.3 bits (591), Expect = 3.3e-61
Identity = 116/180 (64.44%), Postives = 141/180 (78.33%), Query Frame = 0


Query: 9   DPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGGDLRSFF 68
           +PL++G VVGDV+D F PT KM V+Y + K+V NGHEL P+ V+ KP+VE+ GGDLRSFF
Sbjct: 10  EPLIMGRVVGDVLDFFTPTTKMNVSY-NKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFF 69

Query: 69  TLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKYEVPSPNIG 128
           TLVM DPDVPGPSDP+L+EHLHW         +   IPGTTDATFGKEVV YE+P P+IG
Sbjct: 70  TLVMIDPDVPGPSDPFLKEHLHW---------IVTNIPGTTDATFGKEVVSYELPRPSIG 129

Query: 129 IHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQRATAARRR 188
           IHRFVF+L++QK+R+ + P  P  SRD FN RKFA + DL LPVAAV+FNAQR TAAR+R
Sbjct: 130 IHRFVFVLFRQKQRRVIFPNIP--SRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177

[Close]

BLAST of Lsi10G011650 vs. TAIR 10
Match: AT5G62040.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 200.3 bits (508), Expect = 1.4e-51
Identity = 101/180 (56.11%), Postives = 128/180 (71.11%), Query Frame = 0


Query: 9   DPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGGDLRSFF 68
           +PL++G V+GDV++ F P+V M VT++SN  V NGHEL P+ +  KP+VE+ G DLRSFF
Sbjct: 6   EPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQDLRSFF 65

Query: 69  TLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKYEVPSPNIG 128
           TL+M DPD P PS+PY+RE+LHW         +   IPGTTDA+FG+E+V+YE P P  G
Sbjct: 66  TLIMMDPDAPSPSNPYMREYLHW---------MVTDIPGTTDASFGREIVRYETPKPVAG 125

Query: 129 IHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQRATAARRR 188
           IHR+VF L+KQ+ RQ VK   P T R+ FN   F+    LS PVAAVYFNAQR TA RRR
Sbjct: 126 IHRYVFALFKQRGRQAVKAA-PET-RECFNTNAFSSYFGLSQPVAAVYFNAQRETAPRRR 174

[Close]

BLAST of Lsi10G011650 vs. TAIR 10
Match: AT1G65480.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 170.2 bits (430), Expect = 1.5e-42
Identity = 91/180 (50.56%), Postives = 118/180 (65.56%), Query Frame = 0


Query: 9   DPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGGDLRSFF 68
           DPL++  VVGDV+D F  ++ + VTY   ++V NG +L P+ V  KP+VE+ G DLR+F+
Sbjct: 7   DPLIVSRVVGDVLDPFNRSITLKVTY-GQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFY 66

Query: 69  TLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKYEVPSPNIG 128
           TLVM DPDVP PS+P+LRE+LHW         L   IP TT  TFG E+V YE PSP  G
Sbjct: 67  TLVMVDPDVPSPSNPHLREYLHW---------LVTDIPATTGTTFGNEIVCYENPSPTAG 126

Query: 129 IHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQRATAARRR 188
           IHR VF+L++Q  RQTV  P     R  FN R+FA+  +L LPVAAV++N QR +    R
Sbjct: 127 IHRVVFILFRQLGRQTVYAP---GWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGR 173

[Close]

BLAST of Lsi10G011650 vs. TAIR 10
Match: AT4G20370.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 162.5 bits (410), Expect = 3.2e-40
Identity = 90/173 (52.02%), Postives = 110/173 (63.58%), Query Frame = 0


Query: 9   DPLVIGGVVGDVVDAFCPTVKMTVTYHSNKKVCNGHELLPNFVTLKPKVEVLGGDLRSFF 68
           DPLV+G VVGDV+D F   V + VTY  +++V NG +L P+ V  KP VE+ G D R+F+
Sbjct: 7   DPLVVGSVVGDVLDPFTRLVSLKVTY-GHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFY 66

Query: 69  TLVMTDPDVPGPSDPYLREHLHWYHLLSSNSHLEGYIPGTTDATFGKEVVKYEVPSPNIG 128
           TLVM DPDVP PS+P+ RE+LHW         L   IP TT   FG EVV YE P P  G
Sbjct: 67  TLVMVDPDVPSPSNPHQREYLHW---------LVTDIPATTGNAFGNEVVCYESPRPPSG 126

Query: 129 IHRFVFLLYKQKRRQTVKPPHPSTSRDGFNARKFAQDNDLSLPVAAVYFNAQR 182
           IHR V +L++Q  RQTV  P     R  FN R+FA+  +L LPVAA YFN QR
Sbjct: 127 IHRIVLVLFRQLGRQTVYAP---GWRQQFNTREFAEIYNLGLPVAASYFNCQR 166

The following BLAST results are available for this feature:

BLAST of Lsi10G011650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q41261	7.4e-66	67.55	Protein CENTRORADIALIS OS=Antirrhinum majus OX=4151 GN=CEN PE=1 SV=1	[more]
Q9XH43	1.4e-64	67.96	CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1	[more]
Q9ZNV5	6.9e-64	65.59	Protein CENTRORADIALIS-like OS=Arabidopsis thaliana OX=3702 GN=CEN PE=2 SV=1	[more]
O82088	1.5e-63	63.98	Protein SELF-PRUNING OS=Solanum lycopersicum OX=4081 GN=SP PE=2 SV=1	[more]
Q9XH42	3.4e-63	66.30	CEN-like protein 4 OS=Nicotiana tabacum OX=4097 GN=CET4 PE=2 SV=1	[more]

BLAST of Lsi10G011650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C8A7	1.3e-81	82.98	CEN-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103497942 PE=3 SV=1	[more]
A0A0A0KB52	1.7e-81	83.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152360 PE=3 SV=1	[more]
B9ZYL5	6.5e-81	82.98	TFL1-like protein OS=Cucumis sativus OX=3659 GN=CsTFL1d PE=2 SV=1	[more]
A0A6J1DHW3	1.1e-80	83.33	CEN-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111020644 PE=3 SV=1	[more]
A0A6J1FY68	1.4e-80	82.26	CEN-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111448384 PE=3 SV=1	[more]

BLAST of Lsi10G011650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902549.1	2.4e-90	89.36	CEN-like protein 2 [Benincasa hispida]	[more]
KAE8646911.1	4.1e-82	84.04	hypothetical protein Csa_021030 [Cucumis sativus]	[more]
KAG6570484.1	2.7e-81	82.45	CEN-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_008458582.1	2.7e-81	82.98	PREDICTED: CEN-like protein 2 [Cucumis melo]	[more]
XP_023512960.1	4.6e-81	82.45	CEN-like protein 2 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi10G011650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27550.1	4.9e-65	65.59	centroradialis	[more]
AT5G03840.1	3.3e-61	64.44	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT5G62040.1	1.4e-51	56.11	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT1G65480.1	1.5e-42	50.56	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT4G20370.1	3.2e-40	52.02	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008914	Phosphatidylethanolamine-binding protein	PFAM	PF01161	PBP	coord: 66..176 e-value: 4.4E-10 score: 40.0
IPR036610	PEBP-like superfamily	GENE3D	3.90.280.10		coord: 2..188 e-value: 3.2E-51 score: 175.5
IPR036610	PEBP-like superfamily	SUPERFAMILY	49777	PEBP-like	coord: 15..181
IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	PANTHER	PTHR11362	PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN	coord: 7..187
IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	CDD	cd00866	PEBP_euk	coord: 28..177 e-value: 3.49062E-39 score: 129.416
None	No IPR available	PANTHER	PTHR11362:SF48	PROTEIN CENTRORADIALIS-LIKE	coord: 7..187
IPR001858	Phosphatidylethanolamine-binding, conserved site	PROSITE	PS01220	PBP	coord: 68..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G011650.1	Lsi10G011650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009910	negative regulation of flower development
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus