Lsi10G010880 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G010880
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ankyrin repeat domain-containing protein 2A isoform X1
Location	chr10: 15181466 .. 15184412 (-)
RNA-Seq Expression	Lsi10G010880
Synteny	Lsi10G010880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGTGGAAACGAATCGATCAGAAGAGCAGAGCATCGTGGAAACGACGATGGATGACATTGAGGCTCTTGTTGATGTACAATCTTCAATCTCTTGCTTTATTGAATCCTCTATTTCTGGTTTGTTCACTTTTCCTTCCATCGCAGAACATCTCCTCATCTTCTTATCGATCTTCTATAAAGTTTTCGGCGGTGCTTTTAAGCGAATTCGCGTTGAAGTTTAGTGAACCGTGGATTTCTTATGCCATATGTTTAAGTGGCTTAGTAATCGTACTCGAATAATTCTCGAGAAACGCATATGTGGTCTTTTTTAGAATTTACACAATATCTGCGGTTCAATGAAACTTTTGGTTTGACTTATAACGAGCGAGTTATTATAAGGTCATTTAACGAGATGGAGAGCACTTTCGTTCCTATTTTGACCATGGAAATGTATGGATAACTAGAATTCTGAAAAGACTTTGGAACAGCAAATTGTTCGCCTATTATTTATGAAATGATTTTAGGTAATTAGTACATCATGCTTGAGAAATTGATCAAGATATTGGCGAGTTAAGGTCCAGTGATGAAGGACTTAGATTTTGTGATGTCACTTGACAGGCTGCTAGATACAATGATTTCGATGATGTAACAAGTCTTGCTTCTGCTGGTGTTTGTCTCGACTCCAAGGATTCCGAGGGCCGAACTGGTAACTTTCTTCCATATTTGACAATATCTTTTTTTATTATTTTTATTTTTTCTGTGCATTACAACTCACAATTTACAATCACTTGATATGAAAATTTTATTATTGGACGAGTTAGTTTCCAACTTATGTACTCCCAGATTTATTAACATTTCAATGGAACCTTCTGTTCCTATTAGGAAAACTTAATTACTCTATTGAACAGAACCATACTCACCAGGTATATTTTGTAATTCAATCTACAAATAGTAAATTCAGTTAGTCATGATTTTCAAAAATAGAACTTCATTGGTTTTATTCTAGCGTATGGGCCTATTTAGAATGACTTTCTAAGTACTTAGAAAATTGTTTTTAAACATTCAGCGAATAAATCCAAATGGGCTCTAAGAATATTTTGCAAATTTAATTTTTTTTATTGAGAATGCAATAAAGTTAAGCTCTTTTATTGTGTCATCTCTGTTATTTGATTGTAGCTCTTCACATGGCTGCTGCGAATGGACATCTTTTGATAGTTGAGTTTCTTATAAATAAAGGAGTGGTGAGACATCTCTACTTCTTGTAATTACCTGCTGCTTGGGTTATGTAGTTCTTTACTGACTAATAATTGACAGAGGGGTTGGTCTTTCTCAAGAAACAAGACTCTTGCATCTGTTTCCCATGCATCTGTGTTATCCATAACGATGATTATATTTATCGTACCATATCATTATTCTCGTCGTCAATCTGCTTGAACTATGAAATGAATAAATTTGGACTGCTACAATTCATTTTCTGGTTGATTTGAACTTAATTAAGTTCTCCAACGAGTCCCGTTATATATATTGTGCCTGCTGTAATTGTGTTTTATCTGGGATACAATACATTCGGAATGTTTATCACCAACTTGCCTTTCTCGATCACTTTCCAATTGATTTTCAGCTTTTGTTTGATGAAAGGCCAATTGGAATTTTTCATTTTAAAACCTTTGATTGGATTCAGCAAAATTTTACAATGCAATCCTTACCCTACCATTATATTGTTAACCTTTTTGAGTGTGAGCAGGATGTGAATGCTTTGAATGCAGAGAAGAATACACCACTACATTGGGCATGTCTGAATGGCCATATTGAGGTAATGCTCTAATAATTTTAAGGTTAAATTATAGGCTTTTATGTTTAATAGGTCTCCGAACTTTAAACAATGTCTAATAGGTTCCTTTAAACACGTAAAATGTTTCCATAAACTTTCAATTTTTAATTGATCCTTTACATATTTTTCATTTTCTGAAACTTAACAAATTTGTTAAACATTGAATTTGAATTTTGTTTCTTGTCTAAAAGAACATTAAACTTTTTTTTCCTCTCTAAAACACCATTGAACTTTTATATCCAATAGGTTCATGAATAAAAGTTTTGAATTGGCCGCATGTCTATTGGACAAAAAATTGAAAGTTCACAAGCCTATTAGATTTCTTACACAAATTTTAAAGTTCATGGGCTAAACTTGTAAGTTAATTTAACTAGTTATTTAACCTAATTTTATTGATGAGCTAGCTTCCATCTTATTCACACATTCCCTTTAGGTGGTGAAGAGGTTGATCTTGGCCGGAGCCAATTTGAGCCTATTGAACAGGTACGTTATGTTTTTTTTATAATTAATTGTGAGATTTAGATTGTAATCAAAATTACTGCAATCATAGTGGATTTCTTTAATTATTGTTATTCATAATTCAAAGAATATTGTTAACTAATTCTCATGGAACCTATTTAAATAGGCTCCACTTTTCATATAATGATTGATTGATTACATTTACTAGGAAGTAAACGTGGCCTTAATTCAAACATTATAACAAGGATCTTTCCTGGGTGGTAAAATTTCAAATGTTATTTGTGTATAGCCATGAGAGAACTCCCATGGATGAAGCTCTGACTCGGGGGAAAATGGATGTCATTGATGCAATCAACACAGCGGTGGCGCAAGTCGAGCTCACTGGAATCAGTGTTTCACCTGTGGAAACATAGTTAAGGGAAATCAAAATTTTGATCTATTGGCTTAATATGTGAGAAAAGATTACGAGTCTTGTGAAGACTGCAGGAAATAGAGATATGATGGTTCTATAAGATTAGAAAAATGCATCCATTAACTCTTATTTAGAGTTTCAAATGACCTTAAAATGATAATTATGCAGTCAACTCCCCTTAGGGTATGTAATATACATTCTTTCGAACCCCACAAATATATTCTTCGTGACCTTTTAAGTTTAATTTGTTTTATTAGTTAAA

mRNA sequence

ATGGTGGTGGAAACGAATCGATCAGAAGAGCAGAGCATCGTGGAAACGACGATGGATGACATTGAGGCTCTTGTTGATGTACAATCTTCAATCTCTTGCTTTATTGAATCCTCTATTTCTGGTTTGTTCACTTTTCCTTCCATCGCAGAACATCTCCTCATCTTCTTATCGATCTTCTATAAAGTTTTCGGCGGTGCTTTTAAGCGAATTCGCGTTGAAGCTGCTAGATACAATGATTTCGATGATGTAACAAGTCTTGCTTCTGCTGGTGTTTGTCTCGACTCCAAGGATTCCGAGGGCCGAACTGGATGTGAATGCTTTGAATGCAGAGAAGAATACACCACTACATTGGGCATCCATGAGAGAACTCCCATGGATGAAGCTCTGACTCGGGGGAAAATGGATGTCATTGATGCAATCAACACAGCGGTGGCGCAAGTCGAGCTCACTGGAATCAGTGTTTCACCTGTGGAAACATAGTTAAGGGAAATCAAAATTTTGATCTATTGGCTTAATATGTGAGAAAAGATTACGAGTCTTGTGAAGACTGCAGGAAATAGAGATATGATGGTTCTATAAGATTAGAAAAATGCATCCATTAACTCTTATTTAGAGTTTCAAATGACCTTAAAATGATAATTATGCAGTCAACTCCCCTTAGGGTATGTAATATACATTCTTTCGAACCCCACAAATATATTCTTCGTGACCTTTTAAGTTTAATTTGTTTTATTAGTTAAA

Coding sequence (CDS)

ATGGTGGTGGAAACGAATCGATCAGAAGAGCAGAGCATCGTGGAAACGACGATGGATGACATTGAGGCTCTTGTTGATGTACAATCTTCAATCTCTTGCTTTATTGAATCCTCTATTTCTGGTTTGTTCACTTTTCCTTCCATCGCAGAACATCTCCTCATCTTCTTATCGATCTTCTATAAAGTTTTCGGCGGTGCTTTTAAGCGAATTCGCGTTGAAGCTGCTAGATACAATGATTTCGATGATGTAACAAGTCTTGCTTCTGCTGGTGTTTGTCTCGACTCCAAGGATTCCGAGGGCCGAACTGGATGTGAATGCTTTGAATGCAGAGAAGAATACACCACTACATTGGGCATCCATGAGAGAACTCCCATGGATGAAGCTCTGACTCGGGGGAAAATGGATGTCATTGATGCAATCAACACAGCGGTGGCGCAAGTCGAGCTCACTGGAATCAGTGTTTCACCTGTGGAAACATAG

Protein sequence

MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFYKVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEGRTGCECFECREEYTTTLGIHERTPMDEALTRGKMDVIDAINTAVAQVELTGISVSPVET

Homology

[Close]

BLAST of Lsi10G010880 vs. ExPASy TrEMBL
Match: A0A6J1JHQ8 (ankyrin repeat domain-containing protein 2A isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484598 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 7.5e-22
Identity = 88/204 (43.14%), Postives = 94/204 (46.08%), Query Frame = 0


Query: 1   MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFY 60
           +VVE NRSEEQS VETTM+DIEAL                                    
Sbjct: 2   VVVEENRSEEQSTVETTMNDIEAL------------------------------------ 61

Query: 61  KVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEGRT------------------ 120
                      VEAARYND DDV SLASAGV LDSKDSEGRT                  
Sbjct: 62  -----------VEAARYNDIDDVVSLASAGVHLDSKDSEGRTALHMAAANGHLSIVEFLI 121

Query: 121 --GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMD 160
             G +      E  T                          L  HE+TPMDEALTRGKMD
Sbjct: 122 SKGVDVNALNAEKNTPLHWACLNGHIEVVEKLILSGANVSLLNSHEKTPMDEALTRGKMD 158

[Close]

BLAST of Lsi10G010880 vs. ExPASy TrEMBL
Match: A0A6J1FU05 (ankyrin repeat domain-containing protein 2A isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448432 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 9.8e-22
Identity = 88/204 (43.14%), Postives = 94/204 (46.08%), Query Frame = 0


Query: 1   MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFY 60
           +VVE NRSEEQS VETTM+DIEAL                                    
Sbjct: 2   VVVEENRSEEQSTVETTMNDIEAL------------------------------------ 61

Query: 61  KVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEGRT------------------ 120
                      VEAARYND DDV SLASAGV LDSKDSEGRT                  
Sbjct: 62  -----------VEAARYNDVDDVVSLASAGVHLDSKDSEGRTALHMAAANGHLSIVEFLI 121

Query: 121 --GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMD 160
             G +      E  T                          L  HE+TPMDEALTRGKMD
Sbjct: 122 SKGVDVNALNAEKNTPLHWACLNGHIEVVKKLILSGANVSLLNSHEKTPMDEALTRGKMD 158

[Close]

BLAST of Lsi10G010880 vs. ExPASy TrEMBL
Match: A0A6J1JCZ1 (ankyrin repeat domain-containing protein 2A isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484598 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.1e-20
Identity = 87/204 (42.65%), Postives = 91/204 (44.61%), Query Frame = 0


Query: 1   MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFY 60
           MVVE NR EEQS V TT DDIEALVD                                  
Sbjct: 1   MVVEENRLEEQSTVGTTTDDIEALVD---------------------------------- 60

Query: 61  KVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEGRT------------------ 120
                        AARYND DDV SLASAGV LDSKDSEGRT                  
Sbjct: 61  -------------AARYNDIDDVVSLASAGVHLDSKDSEGRTALHMAAANGHLSIVEFLI 120

Query: 121 --GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMD 160
             G +      E  T                          L  HE+TPMDEALTRGKMD
Sbjct: 121 SKGVDVNALNAEKNTPLHWACLNGHIEVVEKLILSGANVSLLNSHEKTPMDEALTRGKMD 157

[Close]

BLAST of Lsi10G010880 vs. ExPASy TrEMBL
Match: A0A6J1FVA9 (ankyrin repeat domain-containing protein 2A isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448432 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.4e-20
Identity = 87/204 (42.65%), Postives = 91/204 (44.61%), Query Frame = 0


Query: 1   MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFY 60
           MVVE NR EEQS V TT DDIEALVD                                  
Sbjct: 1   MVVEENRLEEQSTVGTTTDDIEALVD---------------------------------- 60

Query: 61  KVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEGRT------------------ 120
                        AARYND DDV SLASAGV LDSKDSEGRT                  
Sbjct: 61  -------------AARYNDVDDVVSLASAGVHLDSKDSEGRTALHMAAANGHLSIVEFLI 120

Query: 121 --GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMD 160
             G +      E  T                          L  HE+TPMDEALTRGKMD
Sbjct: 121 SKGVDVNALNAEKNTPLHWACLNGHIEVVKKLILSGANVSLLNSHEKTPMDEALTRGKMD 157

[Close]

BLAST of Lsi10G010880 vs. ExPASy TrEMBL
Match: A0A5A7V7Q8 (Ankyrin repeat-containing protein P16F5.05c isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00760 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.7e-19
Identity = 81/204 (39.71%), Postives = 90/204 (44.12%), Query Frame = 0


Query: 1   MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFY 60
           MVVE N+SEEQS V+TTM+DIE LVD                                  
Sbjct: 1   MVVEANQSEEQSTVQTTMNDIEDLVD---------------------------------- 60

Query: 61  KVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEGRT------------------ 120
                        AARYND +DV  L SAGVCLDSKDSEGRT                  
Sbjct: 61  -------------AARYNDLEDVERLTSAGVCLDSKDSEGRTALHMAAANGHLSIVEFLI 120

Query: 121 --GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMD 160
             G +      E  T                          L  HE+TP+DEALTRGKMD
Sbjct: 121 NRGVDVNALNAEKNTPLHWACLNGHIEVVKKLILAGANLSLLNSHEKTPVDEALTRGKMD 157

[Close]

BLAST of Lsi10G010880 vs. NCBI nr
Match: KAG6570418.1 (Ankyrin repeat domain-containing protein 2A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 125.2 bits (313), Expect = 5.1e-25
Identity = 105/245 (42.86%), Postives = 121/245 (49.39%), Query Frame = 0


Query: 1   MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFY 60
           +VVE NRSEEQS VETTM+DIEALVD++SSIS  I+SSIS  FT P+I   + +  + + 
Sbjct: 2   VVVEENRSEEQSTVETTMNDIEALVDLKSSISFRIKSSISE-FT-PNICGSMKLLAARYN 61

Query: 61  KV-----FGGAFKRI------------------------------------RVEAARYND 120
            V        A  R+                                     V+AARYND
Sbjct: 62  DVDNVTRLASAGVRLDSKEFRWPNCGSTMVVEENRLEDLSTVGTTTDDIEALVDAARYND 121

Query: 121 FDDVTSLASAGVCLDSKDSEGRT--------------------GCECFECREEYTT---- 160
            DDV SLASAGV LDSKDSEGRT                    G +      E  T    
Sbjct: 122 VDDVVSLASAGVHLDSKDSEGRTALHMAAANGHLSIVEFLISKGVDVNALNAEKNTPLHW 181

[Close]

BLAST of Lsi10G010880 vs. NCBI nr
Match: XP_038900447.1 (ankyrin repeat-containing protein P16F5.05c isoform X1 [Benincasa hispida])

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-22
Identity = 90/203 (44.33%), Postives = 93/203 (45.81%), Query Frame = 0


Query: 1   MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFY 60
           MV+E NRSEEQS VETTM+DIE LVD                                  
Sbjct: 1   MVMEANRSEEQSTVETTMNDIEDLVD---------------------------------- 60

Query: 61  KVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEGRT------------------ 120
                        AARYNDFDDV SLASAGVCLDSKDS GRT                  
Sbjct: 61  -------------AARYNDFDDVISLASAGVCLDSKDSNGRTALHMAAANGHLSIVEFLI 120

Query: 121 --GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMD 159
             G +      E  T                          L  HERTPMDEALTRGKMD
Sbjct: 121 SKGVDVNALNAEKNTPLHWACLNGHIEVVKRLILAGANLSLLNSHERTPMDEALTRGKMD 156

[Close]

BLAST of Lsi10G010880 vs. NCBI nr
Match: XP_022987034.1 (ankyrin repeat domain-containing protein 2A isoform X2 [Cucurbita maxima])

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-21
Identity = 88/204 (43.14%), Postives = 94/204 (46.08%), Query Frame = 0


Query: 1   MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFY 60
           +VVE NRSEEQS VETTM+DIEAL                                    
Sbjct: 2   VVVEENRSEEQSTVETTMNDIEAL------------------------------------ 61

Query: 61  KVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEGRT------------------ 120
                      VEAARYND DDV SLASAGV LDSKDSEGRT                  
Sbjct: 62  -----------VEAARYNDIDDVVSLASAGVHLDSKDSEGRTALHMAAANGHLSIVEFLI 121

Query: 121 --GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMD 160
             G +      E  T                          L  HE+TPMDEALTRGKMD
Sbjct: 122 SKGVDVNALNAEKNTPLHWACLNGHIEVVEKLILSGANVSLLNSHEKTPMDEALTRGKMD 158

[Close]

BLAST of Lsi10G010880 vs. NCBI nr
Match: XP_022943787.1 (ankyrin repeat domain-containing protein 2A isoform X2 [Cucurbita moschata])

HSP 1 Score: 113.2 bits (282), Expect = 2.0e-21
Identity = 88/204 (43.14%), Postives = 94/204 (46.08%), Query Frame = 0


Query: 1   MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFY 60
           +VVE NRSEEQS VETTM+DIEAL                                    
Sbjct: 2   VVVEENRSEEQSTVETTMNDIEAL------------------------------------ 61

Query: 61  KVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEGRT------------------ 120
                      VEAARYND DDV SLASAGV LDSKDSEGRT                  
Sbjct: 62  -----------VEAARYNDVDDVVSLASAGVHLDSKDSEGRTALHMAAANGHLSIVEFLI 121

Query: 121 --GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMD 160
             G +      E  T                          L  HE+TPMDEALTRGKMD
Sbjct: 122 SKGVDVNALNAEKNTPLHWACLNGHIEVVKKLILSGANVSLLNSHEKTPMDEALTRGKMD 158

[Close]

BLAST of Lsi10G010880 vs. NCBI nr
Match: XP_022987031.1 (ankyrin repeat domain-containing protein 2A isoform X1 [Cucurbita maxima] >XP_022987033.1 ankyrin repeat domain-containing protein 2A isoform X1 [Cucurbita maxima])

HSP 1 Score: 109.8 bits (273), Expect = 2.2e-20
Identity = 87/204 (42.65%), Postives = 91/204 (44.61%), Query Frame = 0


Query: 1   MVVETNRSEEQSIVETTMDDIEALVDVQSSISCFIESSISGLFTFPSIAEHLLIFLSIFY 60
           MVVE NR EEQS V TT DDIEALVD                                  
Sbjct: 1   MVVEENRLEEQSTVGTTTDDIEALVD---------------------------------- 60

Query: 61  KVFGGAFKRIRVEAARYNDFDDVTSLASAGVCLDSKDSEGRT------------------ 120
                        AARYND DDV SLASAGV LDSKDSEGRT                  
Sbjct: 61  -------------AARYNDIDDVVSLASAGVHLDSKDSEGRTALHMAAANGHLSIVEFLI 120

Query: 121 --GCECFECREEYTT-------------------------TLGIHERTPMDEALTRGKMD 160
             G +      E  T                          L  HE+TPMDEALTRGKMD
Sbjct: 121 SKGVDVNALNAEKNTPLHWACLNGHIEVVEKLILSGANVSLLNSHEKTPMDEALTRGKMD 157

[Close]

BLAST of Lsi10G010880 vs. TAIR 10
Match: AT5G12320.1 (ankyrin repeat family protein )

HSP 1 Score: 64.7 bits (156), Expect = 7.7e-11
Identity = 45/129 (34.88%), Postives = 60/129 (46.51%), Query Frame = 0


Query: 72  VEAARYNDFDDVTSLASAGVCLDSKDSEGRTGCECFECR-----EEYTTTLGI------- 131
           +EAARYND DD+ +LAS G+ L S+DS+GRT              EY  + G+       
Sbjct: 16  LEAARYNDIDDLRTLASDGLSLHSRDSQGRTALHMAAANGHMTIVEYLISEGVDINALND 75

Query: 132 ---------------------------------HERTPMDEALTRGKMDVIDAINTAVAQ 156
                                            +ERTPMDEA+   KM++IDAINT VAQ
Sbjct: 76  ENNAPLHWACLNGHVEVVKRLILAGASLSLLNRYERTPMDEAIGAEKMEIIDAINTTVAQ 135

The following BLAST results are available for this feature:

BLAST of Lsi10G010880 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi10G010880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JHQ8	7.5e-22	43.14	ankyrin repeat domain-containing protein 2A isoform X2 OS=Cucurbita maxima OX=36...	[more]
A0A6J1FU05	9.8e-22	43.14	ankyrin repeat domain-containing protein 2A isoform X2 OS=Cucurbita moschata OX=...	[more]
A0A6J1JCZ1	1.1e-20	42.65	ankyrin repeat domain-containing protein 2A isoform X1 OS=Cucurbita maxima OX=36...	[more]
A0A6J1FVA9	1.4e-20	42.65	ankyrin repeat domain-containing protein 2A isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A5A7V7Q8	2.7e-19	39.71	Ankyrin repeat-containing protein P16F5.05c isoform X1 OS=Cucumis melo var. maku...	[more]

BLAST of Lsi10G010880 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570418.1	5.1e-25	42.86	Ankyrin repeat domain-containing protein 2A, partial [Cucurbita argyrosperma sub...	[more]
XP_038900447.1	1.1e-22	44.33	ankyrin repeat-containing protein P16F5.05c isoform X1 [Benincasa hispida]	[more]
XP_022987034.1	1.5e-21	43.14	ankyrin repeat domain-containing protein 2A isoform X2 [Cucurbita maxima]	[more]
XP_022943787.1	2.0e-21	43.14	ankyrin repeat domain-containing protein 2A isoform X2 [Cucurbita moschata]	[more]
XP_022987031.1	2.2e-20	42.65	ankyrin repeat domain-containing protein 2A isoform X1 [Cucurbita maxima] >XP_02...	[more]

BLAST of Lsi10G010880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12320.1	7.7e-11	34.88	ankyrin repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR24134	ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043	coord: 72..103 coord: 115..155
None	No IPR available	PANTHER	PTHR24134:SF7	ANKYRIN REPEAT FAMILY PROTEIN	coord: 72..103 coord: 115..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G010880.1	Lsi10G010880.1	mRNA