Lsi10G010670 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G010670
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Nuclear transcription factor Y subunit
Location	chr10: 14907187 .. 14914731 (+)
RNA-Seq Expression	Lsi10G010670
Synteny	Lsi10G010670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATACGTGGCATGCGCTGCTGTCGCTACTTTAAAGATGCGGTCCCCACTTTTGCGCCAAGCGTTTCCCGGACTTTGCTCGTCAAGTGCGTGTCACGTGGGTCAAAATATATTATCCCAATTTCTGCTTTTTATCCTGAAAATCGAATTTCCATAACCTCACCCGCCTGTGAGATTCAGTAGCTCACGACCCACGTCAACTGGGAACCTGCTTTAGCCGGTTGACTCGTCTCATTGACATCGAAACTTGGATTTCATAGTCCGAAACTGGAAGGGGAGGTTGCCGGTAGAAGAGTAGCTGGAACTGAAATCGGGTCCCGCAGTGGGTGAAGGAACAGTAGCCGTAGCTCTTGAATTTGAGTTCCCAAAAGGGTCGTTGCTTTACTTCAATTACTGTGCTCTCAGTATGAGAATCGCTCAAGAACTGAATTGACTCTTCAATTCTTCTCTTTCTCTTTCTGTTTTTCTTTTTTCCCAGATTCCCAGCGGTTGTTTCCTGAATCTAGGGCTGTGGATTTCCAGAATTTTCCATCCAAGTGAGTTCGTCTCTTTCTCTGACTTGATTTTGCAAGATTCTGGTTTCTTTTTTCTCATCTCTCTCTGTCTCTCACTCGTGTAACTAAATTTACTCTAGGGTTTTCTCAATTCAGTTCTTTCTCTTCCCCTTTTTTGGGTTTTGTTTATGTTCGAGTATTGTTCTCCTTGCATGGAATCGTGTCGGCTTGGGTTTCTTCATTCATGCGACTAGGATTTGGGATTTTGGATCACTAGAGTGGAGAATTTCACTTGGTGGGAATCGAGTGGAATTGGGATCTTGATGGGAATTTAGAAGTCACGAGTTTGGTGATTTTTGCTCTTGTTTTTTAAGATTGAACTCGCGCTATCGTATTCTGTTTTGCTCCCTCGAATTGAAATCTATCCAAGTTTTTGGGTATTGGGTTCTGTTTGTTGTCTGCATGTGGGGATTATGGTTCGAGCAGTCCTTAGTGGCTGAATTTAGGTTGGAATGTCAGTCGCCAAATATAGAAGTGAATGTTTTCTATAGAACGCTATTAGTTACCTCTGCACTTGCATGTGAATCACTGGCATGCTCAACTTAGATGTTAAAGAGGAACTCATTTAATGCAAGATACTAAACTATGATTTGATATTTGGCTGGAGCGTTTAGGAGGATTCACCAATATTATCCTGCAACTTATCCCCCTTTCAGTTATTTATATTTCTCGAGTTGCGGTTTGAAGAGTGATAAAAAGGTCGCCTATGATCATTTCTATTTTAGCCTGGAGACAAATGGAGCCCAAAATAAGATATGACGGAAGTAGATAACAGGAGTTGTTTTGAAATTTGTGCATGGAAATGAATAGAGCTCCACTCAACATTTCGGGAATTTGTTTATGCTTTGAATTAAAGATTATGCTGCACTTCTGTCACTTCAAAATTGAAACTTTAGCGGTTCTAAGTTGTGATTTAACCGAGTCCATAAAGCATTTCCGATTCCAAAATTCTGCAAGCACAAAATAGAAACTGATTTGTTTTCTGTCTTTGATCTTACACTCAATTGATGGATAACTAGATAAGTAACCAGCTTAGCTTGGAAGACCCGAAGAAACTAAAGTTGTAGAGCATTTTACTTCCAATGAAGTGATAAGCCTCATTCAAGTGAAAAATGAGCAATGTTCTGCCGAAGGATACAGTTAAAGTATGATATGGGAAAGATTATGTAATCATAATTGGAAGGAAACAAAAAACATAGTTAATTGTTAAGGATGACGCTGCTGCTTGAGGTTAAGCTTTTCTTGGTTATTATCTCCTAGTCTTTCCCTGTATTTTCTCCCAGCTTCCTGAATAGTGAATACTAAACCTCTCTAATCTGACAGAAAACTATTGCCTCCGCCTTTATCTCAGACCATTGAATTTAAGACTGTAAGCAAAACTGCTTCAGCTGGCTGTTGAATATTCTTTTTAATTTCCTTCTCTCACATGTGTTATTTTAAACCTAAGGAATCAAACTATTTTCCCTTCTCTTCAGAAAAGAATAATGGCCATGGACGATTTTTAAGGTTTTCAAAACAAACAATGCTTCATTTTTCTTCTTTTCCTTTTGATGCATTCTTTTCAGTGCTTTTATCATAGGGTGATGGCTTCTTCTCTGTTTATCCAACATTTGTTTTGCATGGTTTGTGTATTCTAGTTGTTTCCGTGACTCCGTCCTTATATCTTATCTAACATATATATTTGTTCAGAAGGCATGCAGTCAAAGTCTAAAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCATACTAGTAGTTATTCTGAACCTTGGTGGCGTAGCATTGGGTACAATCATATCTCCCCGCCAGCAGCAGGAGGAAATGTGTCAAATTCAACATCACTGGAATGCACTAATGGTGCTTCAGAATCTAATGATGGTCAGTCCATGTCAAATGATGATTTAAATGAAGACGATGATGATGACACCACAAAAGATTCACATGGTATGGCCCTCTTGGCGTTTTTGCTTGCTAAATCATGTTATAGTTCAAAGAAAGGCACTTATGGTTTTTAGCCTCTTTAGTTATGAGTTGGAACTATTGCACATTTGAGGACAATGACAATATTGCCTCATTGGATTGTTAACAAACATGTTATTGTCAAATTCACCAGCAAGTTATGGGCAAGTACAAGACAACTGTCAGCACGCTGTTTCTGCTGCTCCTACAGTGCATGGTGGATGTATCACACAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGTGAGTTCATTTGCAAGTCTGCCTGATTTCTTTTTTACTTTAGACTTTAGAGACATCCTTCTGACTCTAGGAGTCCAGTTTTTTAATACTGAACGACATTCGTGTTTTATTAACCCATCAGATTTAAGATGCTTTTGAATTTGGTAGGATTATTAGTTTATGTTAATATTTTTCAGGCATGTGCATCAAACCCATATCAGGATCCTTATTATGCTGGAGCGATGGCTGCCTACGGGCATCAACCGGTATGTAGGTTAAAATCATAAAAGATCAGGTGATGTGAGATGTACAGATATTATGTATATATTTCTTGTAATCTTTGCACCATATACACAAACATTTTAGGTGTATATTAGCCCTGGGTAATTTTGATGGTACTCTTGCTTTTTGCCTCCTTGTTTTTCACTTTTATTTTTTTCTTTTGCTTTACCTTTTCAATTATTCAGAAACTTCAATGTCTTTCCTTGTCCTGATTTTCGCTTTCTCAAACCATATCGGTTAAAATAACATATGAGTATATCAAGTGAACTAACTGAAAATTTCCAGTTTCTTGGAAGAGATTGTAGTGTGATAATTGTAGTATCTTGGCGTGGAATTATTTATTTCTTTTTTCTTGGCCATAATGACGAGGTCGTATGTCAAGGATGTCTGAGATCATTGTGGAATGTCATCACTTTTTCCTGATATGTAAGAATCGAAGTTTGTCCTTGACAAGTCCTTCTTATGGTAGGGTTATCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTTTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAGTTAGAAAGGTACAACTGCTATTCAGATGATTGCCTTCCATGTACTACAGCTTGTCTCTTATACATGTTAAAGTAGCTGGGAATCTAACAACGCCTTTTTAATTGTATTTTACTTTTAATGAAGTTCATTCTTTCCTATGCTGCAAAATTCTCTTACTGAGTAGTTTTCTATTGTTTAATTACTGTAAACATGTGAGTGAAGGGCAACTAAAAAATTATTTTGTTGTGCTGGACAGTGGAGTGGATGTACTAACATAGGCTTTCTAAACATAGGTATTTCCCTTATCATCAGTGATTTTTCTGGAATATAACTAGATTTATACCTTTTCTACCCTGAATATCTTGTATGCTTTGGATACCATTAGCCAAATTGATTATATTCCAGCTACCCACATTCAAATGGTTTGCTTTATTCTCATAATCAGATTCCGTGCAAGTGGGAAGTAACCTAAATATTCCAGCTTAAACTTGCTATAGGGATTGTTGAGTGCTAAAATGAATATGGTTAGTACCAAACACCTATATGAATTACGAAGTTGTTGTTTCAAGACCTTACAACACTGAAAAAGATTCAAAGGAATTAGGGAAGGCGTAACGTTGCATTGTGATTATGGTTATGTAAGACCAGAGGTTGTCAACTGAAGATAAAAGTATAATAAACCGTCTCGATATAAAATCACAATTGATTCGGGGATCAGAGCATTTATGTTTTAAATTTTGACTTCAGAGCCTTCATTTACATTTCACGTTGGGTGTTGGGGTGACCATGTATGGTCGACTCACACTAATTCAAGTTGAGTTATACTGAGTCGAAGCTGGTCTTTCAAAATTTCATGACTTCTTGTGGCCATATATAGTTCTTAATAGCTAATTCATTGCCCTTTGAGACAAACATGGTTTGGCTGATTCAGAGTGGTTTCTGCATAGTGTTATATATATGTGCAATGTATGTATGGTCCTATGGATGGATGGATGGGCCACGGTTAGATTTGAAAAATCAAATGTTGTTGAGGGTTGGGGCTTTTTCTTTTTGGAACAATTCTTTTGCTATAGCTTATATGCAGGTATGTATGTTTCTGAAGTTCCTTTAATATTTAGCTTGTGTTTTATTGTACACAGCCATATCTTCATGAATCTCGTCACCAGCATGCTATGAGACGGGCCAGGGGTAGTGGTGGACGATTTGCCAAGAAAAATGAAGCTAATTCCTTGAGTTCTACTATGAAGGACAAGGACTCTGGTTCTGGTCAAGCTATCTCGTCGCACTCTGCTGGTTCATCTGGTTCTGAAGCAGCGCCTTGTGCCCTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGCAAGGACCCAGTTGCATGAAGCATATGAAGCTCGAAGTTATGCGAACGGAAGTAGCCAATTCCATAGTTACAGTAGCTTCCAAGCTTCTTCGTATGGTTTACGGTCTGGTGAGAGAGGTGAAGATGGAGACTGCTCGGGACAGCAGCGAAGTATCTCAGAAAATCAGGCTGCACAGAGGCGTCTTGCCATCAAGTGAACCTCCTGGTTGCGAAAATATGGGGTGCCCCTAGGTTATCTTTGGGACTTCATTCCCTGGCAGAACTGCCAGGCGGCAAATCATTCTTGGCTTTGTTCTGGTGCTTGTTTCTTAATCGTAAAGGAGATGGATGATATAAGTTGGCCATTTGGACCCTAGTTCTAGTTAAGTCCTTGGATGCTTTATTCCATCAACCTCCCCCATTTTTAACTTGTGTATGGAACAGACTCCATAGATTCCAAACAGTGTTTTTTTTTAATTTCCAAACCACCTTGCTTAATCGAATGCTTAACTGTTATGTACTTGTGAGTGTGTCTAGAACTTTGATCCATAATTTGGTTGCTAATTTCATCAAAGTTTTCCAGGTACTAAATATATTTCTTGTTACTATATGAATTCTGATTTCAACCTCCACTGGGAATACCGGAAGATGATCTAAACTTCATGTTGCTTATTCAATGTTTCTGATTAGATTTGAGCTGTCGTTTGAACCAAATGAAATTACTTGGACACCGTTTGAACCTAACCATTTCAGATGCTTGTTTAATGGCAGCTTCCATTATGCTTGATTTGTCTTGTGAAGGGTTAAACCTTGAAACTGTGTATTCCCACTTCTGGAAATGAAAGGACACTGATTTCACTTTGAAAACTGTGAATGAAATAAAGTCAAACACTGCGTCTTGTTTTCTTTTCCCTTGTGATCCCTACGTTATTTTTTTAATGCTCTTTTGATTCCGTGGAAGGCCGAAGACCATGTTGGTGGGGAATGGGGATAATATAGAAAAATAGTTTCTTTAATAACAATTATTCGCTCAAACATACTTTTGCTCATATTTTATTAACAGAGAATTGTTTTTAAAATTGCTTTATATTCTGACGCAGGAATGTTTCTGTTTACTTGTCTTATTAGATGTTTGATGTGAAGGACTATTATTATCCCAGGTGGCAGTGAGGACAGCCATATTCTGGATAAGGTTGTGCCTATACTGGTTGCCAAACACACTGCTCACACAGTTATCAGCTTCTTCTTTGTGATGACATAACATTATCCTGAAAGCATCTTCATGTGGCAGTGGTTAATTAGCAGCTCCCAGATGCTTTCCCTTCGGTCTCTCTTCAATCAAAACCAGCGGCCGCCATTGATAGCCACCAAGAAATGCTCTGATGATGTTTTGAGTAGAAGAAATTTCCACTCATTTCATTATTCTGCTTCTCGTTGTTGCATTGTGCGTGCAAGGGAGACAGATTCTCAACAGTTTGAGGTTGACCCAGATAAGGCCAGGCAAGCCCTTCAAGAGCTTGATCAGCAGCTTCAATCTTTCTCCAAGAAACAAGTCACTTCTCCCAAGAAGAAAGGTAACCCCCAGCTTTTGAATCCTAATTCTAAATAAAATTTGTTGTTGTGAAAGTTTGGTTGAAGACTGGATTGAACTTAGTGGTGTATAAACCATCGTGGATTGACCGAGTCATAAATAAAAGGCTTGAGTTTGATAAATGGCTAAAAGATAATGGATTCAATCTATGGTGACCACCTACCTAGGATTTAATATATTACAAGTTTTCTTGACATCCAAACGTTTTATGGTCAGGCAGGTTGTCCTGTGAGATTAGTCGAGATGCACCTAAACTAGTCCGAACACTTACAAAAGAAACTTAGTCGTGTATAGAAGAAATCTCTACTTATGTTGATAGAGGTTTGGATTGTTTCTAACAATTGTGGTTTTAAAAAACTTTTGCAGTTGAAGATAGGAAGCTTCCAAGAAGTCAAATGAGAGGAGAAATGACAGAGATTTCAGGGGCCCTTTTAGCAAATTCAGCTGTTGCTCTCTTCATCTTCTCCATTTTCTACAATGTGCTGTTTTATGCAGTCATAAAGCCTTCCATTGATGGTCCATTACCAAGTTCAGTCAGTTCTGACTTTGAGAGAGAATCTACTGAGCCATCAGTTTTGCAGCAGCTTCCACTTTCATCTGTGTTCATATCCCCCTCACTTCTTAGTTAAATCTTTATAATAAAAAAAAAAAAGATGATATTACAGAAATGTAACATGGCTGCTAAATTGTATACATCAAGAAAAAGTGATTAAAATCACTTTGTTTACAGTATATTGATGGTGAACCGAACAAAGATAGATTCACTGAGTTATACTCGAATTGACATATACATACTAAAGATTCAAACTTTTAGGCAAAATAAAATTGGGCAAAAGCCTGTGGAAGTAGGTTCTTATGTACTTTCTTATTATTGAGGGCTGTAATGTTTCAAAAAAAAAAAAAACATATAAATTTCTATGTTATAAAAAAAATTGAACTTTTAGAATTGGAATAAA

mRNA sequence

ATGGGATACATTCCCAGCGGTTGTTTCCTGAATCTAGGGCTGTGGATTTCCAGAATTTTCCATCCAAGTGAGTTCGTCTCTTTCTCTGACTTGATTTTGCAAGATTCTGAAGGCATGCAGTCAAAGTCTAAAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCATACTAGTAGTTATTCTGAACCTTGGTGGCGTAGCATTGGGTACAATCATATCTCCCCGCCAGCAGCAGGAGGAAATGTGTCAAATTCAACATCACTGGAATGCACTAATGGTGCTTCAGAATCTAATGATGGTCAGTCCATGTCAAATGATGATTTAAATGAAGACGATGATGATGACACCACAAAAGATTCACATGGTATGGCCCTCTTGGCGTTTTTGCTTGCTAAATCATGTTATAGTTCAAAGAAAGGCACTTATGCAAGTTATGGGCAAGTACAAGACAACTGTCAGCACGCTGTTTCTGCTGCTCCTACAGTGCATGGTGGATGTATCACACAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCATATCAGGATCCTTATTATGCTGGAGCGATGGCTGCCTACGGGCATCAACCGGGTTATCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTTTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAATCTCGTCACCAGCATGCTATGAGACGGGCCAGGGGTAGTGGTGGACGATTTGCCAAGAAAAATGAAGCTAATTCCTTGAGTTCTACTATGAAGGACAAGGACTCTGGTTCTGGTCAAGCTATCTCGTCGCACTCTGCTGGTTCATCTGGTTCTGAAGCAGCGCCTTGTGCCCTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGCAAGGACCCAGTTGCATGAAGCATATGAAGCTCGAAGTTATGCGAACGGAAGTAGCCAATTCCATAGTTACAGTAGCTTCCAAGCTTCTTCGTATGGTTTACGGTCTGGTGAGAGAGGTGAAGATGGAGACTGCTCGGGACAGCAGCGAAGTATCTCAGAAAATCAGGCTGCACAGAGGCGTCTTGCCATCAACTCCCAGATGCTTTCCCTTCGGTCTCTCTTCAATCAAAACCAGCGGCCGCCATTGATAGCCACCAAGAAATGCTCTGATGATGTTTTGAGTAGAAGAAATTTCCACTCATTTCATTATTCTGCTTCTCGTTGTTGCATTGTGCGTGCAAGGGAGACAGATTCTCAACAGTTTGAGGTTGACCCAGATAAGGCCAGGCAAGCCCTTCAAGAGCTTGATCAGCAGCTTCAATCTTTCTCCAAGAAACAAGTCACTTCTCCCAAGAAGAAAGTTGAAGATAGGAAGCTTCCAAGAAGTCAAATGAGAGGAGAAATGACAGAGATTTCAGGGGCCCTTTTAGCAAATTCAGCTGTTGCTCTCTTCATCTTCTCCATTTTCTACAATGTGCTGTTTTATGCAGTCATAAAGCCTTCCATTGATGGTCCATTACCAAGTTCAGTCAGTTCTGACTTTGAGAGAGAATCTACTGAGCCATCAGTTTTGCAGCAGCTTCCACTTTCATCTGTGTTCATATCCCCCTCACTTCTTAGTTAAATCTTTATAATAAAAAAAAAAAAGATGATATTACAGAAATGTAACATGGCTGCTAAATTGTATACATCAAGAAAAAGTGATTAAAATCACTTTGTTTACAGTATATTGATGGTGAACCGAACAAAGATAGATTCACTGAGTTATACTCGAATTGACATATACATACTAAAGATTCAAACTTTTAGGCAAAATAAAATTGGGCAAAAGCCTGTGGAAGTAGGTTCTTATGTACTTTCTTATTATTGAGGGCTGTAATGTTTCAAAAAAAAAAAAAACATATAAATTTCTATGTTATAAAAAAAATTGAACTTTTAGAATTGGAATAAA

Coding sequence (CDS)

ATGGGATACATTCCCAGCGGTTGTTTCCTGAATCTAGGGCTGTGGATTTCCAGAATTTTCCATCCAAGTGAGTTCGTCTCTTTCTCTGACTTGATTTTGCAAGATTCTGAAGGCATGCAGTCAAAGTCTAAAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCATACTAGTAGTTATTCTGAACCTTGGTGGCGTAGCATTGGGTACAATCATATCTCCCCGCCAGCAGCAGGAGGAAATGTGTCAAATTCAACATCACTGGAATGCACTAATGGTGCTTCAGAATCTAATGATGGTCAGTCCATGTCAAATGATGATTTAAATGAAGACGATGATGATGACACCACAAAAGATTCACATGGTATGGCCCTCTTGGCGTTTTTGCTTGCTAAATCATGTTATAGTTCAAAGAAAGGCACTTATGCAAGTTATGGGCAAGTACAAGACAACTGTCAGCACGCTGTTTCTGCTGCTCCTACAGTGCATGGTGGATGTATCACACAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCATATCAGGATCCTTATTATGCTGGAGCGATGGCTGCCTACGGGCATCAACCGGGTTATCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTTTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAATCTCGTCACCAGCATGCTATGAGACGGGCCAGGGGTAGTGGTGGACGATTTGCCAAGAAAAATGAAGCTAATTCCTTGAGTTCTACTATGAAGGACAAGGACTCTGGTTCTGGTCAAGCTATCTCGTCGCACTCTGCTGGTTCATCTGGTTCTGAAGCAGCGCCTTGTGCCCTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGCAAGGACCCAGTTGCATGAAGCATATGAAGCTCGAAGTTATGCGAACGGAAGTAGCCAATTCCATAGTTACAGTAGCTTCCAAGCTTCTTCGTATGGTTTACGGTCTGGTGAGAGAGGTGAAGATGGAGACTGCTCGGGACAGCAGCGAAGTATCTCAGAAAATCAGGCTGCACAGAGGCGTCTTGCCATCAACTCCCAGATGCTTTCCCTTCGGTCTCTCTTCAATCAAAACCAGCGGCCGCCATTGATAGCCACCAAGAAATGCTCTGATGATGTTTTGAGTAGAAGAAATTTCCACTCATTTCATTATTCTGCTTCTCGTTGTTGCATTGTGCGTGCAAGGGAGACAGATTCTCAACAGTTTGAGGTTGACCCAGATAAGGCCAGGCAAGCCCTTCAAGAGCTTGATCAGCAGCTTCAATCTTTCTCCAAGAAACAAGTCACTTCTCCCAAGAAGAAAGTTGAAGATAGGAAGCTTCCAAGAAGTCAAATGAGAGGAGAAATGACAGAGATTTCAGGGGCCCTTTTAGCAAATTCAGCTGTTGCTCTCTTCATCTTCTCCATTTTCTACAATGTGCTGTTTTATGCAGTCATAAAGCCTTCCATTGATGGTCCATTACCAAGTTCAGTCAGTTCTGACTTTGAGAGAGAATCTACTGAGCCATCAGTTTTGCAGCAGCTTCCACTTTCATCTGTGTTCATATCCCCCTCACTTCTTAGTTAA

Protein sequence

MGYIPSGCFLNLGLWISRIFHPSEFVSFSDLILQDSEGMQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHGMALLAFLLAKSCYSSKKGTYASYGQVQDNCQHAVSAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYANGSSQFHSYSSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLAINSQMLSLRSLFNQNQRPPLIATKKCSDDVLSRRNFHSFHYSASRCCIVRARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKKVEDRKLPRSQMRGEMTEISGALLANSAVALFIFSIFYNVLFYAVIKPSIDGPLPSSVSSDFERESTEPSVLQQLPLSSVFISPSLLS

Homology

[Close]

BLAST of Lsi10G010670 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.7e-50
Identity = 136/294 (46.26%), Postives = 175/294 (59.52%), Query Frame = 0


Query: 39  MQSKSKSVNQLE-SEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGAS 98
           MQSK    N+ E +    +Q    Y+EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 99  ESNDGQSMSNDDLNEDDDDDTTKDSHGMALLAFLLAKSCYSSKKGTYASYGQVQDNCQHA 158
           ESND  S S D     ++D T KDS               ++   +  ++G   ++   +
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQA-------------ATSSRSVDNHGMEGNDPALS 120

Query: 159 VSAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQP-GYPPFLGMPHA 218
           +     +H   + QPP  ELVGH IAC  NPYQDPYY G M AYGHQ  G+ P+LGMP  
Sbjct: 121 IR---NMHDQPLVQPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRE 180

Query: 219 RMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRAR 278
           R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR
Sbjct: 181 RTALPLDMAQEPVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRAR 240

Query: 279 GSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS 331
            SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Sbjct: 241 ASGGRFAKKSEVEA------GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of Lsi10G010670 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.7e-44
Identity = 157/371 (42.32%), Postives = 194/371 (52.29%), Query Frame = 0


Query: 37  EGMQSKSKS-VNQLESEPPNMQHTSSYS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECT 96
           E M SKS S  N+++SE      +S  S  PW R +   N  S   AG   S S +L   
Sbjct: 4   EDMHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL--- 63

Query: 97  NGASESNDGQSMSNDD--LNEDDDDDTTKDSHGMALLAFLLAKSCYSSKKGTYASYGQVQ 156
             A ESN  +S SN D  +N++    T+  S G            YS K           
Sbjct: 64  --ALESNGSKSPSNRDNTVNKESQVTTSPQSAG-----------DYSDKN---------- 123

Query: 157 DNCQHAVSAAPTVHGGCITQPPQLELVGHSIACA-SNPYQDPYYAGAMAAYGHQP-GYPP 216
                      ++H G    PP  +LVGH++  A SNPYQDPYYAG M AYGH P G+ P
Sbjct: 124 ---------QESLHHGITQPPPHPQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVP 183

Query: 217 FLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQ 276
           + GMPH+RM LP E+ QEPVFVNAKQYQ ILRRRQARAKAE+E KLIK RKPYLHESRHQ
Sbjct: 184 YGGMPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQ 243

Query: 277 HAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNS 336
           HAMRR RG+GGRFAKK   N+ +S  K ++  +G    S S+ +S          E W  
Sbjct: 244 HAMRRPRGTGGRFAKK--TNTEASKRKAEEKSNGHVTQSPSSSNSDQ-------GEAW-- 302

Query: 337 SNGQQEARTQLHEAYEARSYANGSSQFHSYSSFQASSYGLRSGERGEDGDCSGQQ-RSIS 396
                                NG  +       Q+S+Y     +R E+G+CSGQQ  S+S
Sbjct: 304 ---------------------NGDYRTPQGDEMQSSAY-----KRREEGECSGQQWNSLS 302

Query: 397 ENQAAQRRLAI 400
            N  +Q RLAI
Sbjct: 364 SNHPSQARLAI 302

[Close]

BLAST of Lsi10G010670 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 5.8e-21
Identity = 65/140 (46.43%), Postives = 91/140 (65.00%), Query Frame = 0


Query: 180 HSIACASNPYQDPYYAGAMA--AYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 239
           +S+A    PY DPYY    A     +   +   +G+    + LP +  +EPVFVNAKQY 
Sbjct: 51  NSMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYH 110

Query: 240 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF--AKKNEANSLSSTM 299
           GILRRRQ+RA+ E +NK+IK RKPYLHESRH HA+RR RG GGRF  AKK + +   S+ 
Sbjct: 111 GILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSH 170

Query: 300 KDKDS-GSGQAISSHSAGSS 315
           ++K +  +G++  + S+G+S
Sbjct: 171 EEKSNLSAGKSAMAASSGTS 190

[Close]

BLAST of Lsi10G010670 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.3e-20
Identity = 62/128 (48.44%), Postives = 75/128 (58.59%), Query Frame = 0


Query: 188 PYQDPYYAGAMAAYGHQP-GYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRR 247
           PY DPYY    A   + P  YP      +GM    + L  +  +EPVFVNAKQY GILRR
Sbjct: 54  PYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRR 113

Query: 248 RQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF--AKKNEANSLSSTMKDKDS 307
           RQ+RAK E  N+ IK +KPY+HESRH HA+RR RG GGRF  AKK   +         D 
Sbjct: 114 RQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKEEEEATSDE 173

Query: 308 GSGQAISS 309
            + +A SS
Sbjct: 174 NTSEASSS 181

[Close]

BLAST of Lsi10G010670 vs. ExPASy Swiss-Prot
Match: Q9LVJ7 (Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana OX=3702 GN=NFYA6 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 2.9e-20
Identity = 59/106 (55.66%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 192 PYYAGAMA---AYGHQPGYPPFLGMPHARMALPLEVTQ-EPVFVNAKQYQGILRRRQARA 251
           P++ G ++   A  H   +P   G+  +RM LP  + + EP+FVNAKQYQ ILRRR+ RA
Sbjct: 132 PHFNGFLSFPYASQHTVQHPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRERRA 191

Query: 252 KAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF---AKKNEANS 291
           K E +NKLIKVRKPYLHESRH HA++R RGSGGRF    K  E+NS
Sbjct: 192 KLEAQNKLIKVRKPYLHESRHLHALKRVRGSGGRFLNTKKHQESNS 237

[Close]

BLAST of Lsi10G010670 vs. ExPASy TrEMBL
Match: A0A1S3BNK4 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103491506 PE=3 SV=1)

HSP 1 Score: 617.1 bits (1590), Expect = 7.6e-173
Identity = 328/361 (90.86%), Postives = 331/361 (91.69%), Query Frame = 0


Query: 39  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 98
           MQSKSKSVNQ ESEPPNMQ TSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 99  SNDGQSMSNDDLNEDDDDDTTKDSHGMALLAFLLAKSCYSSKKGTYASYGQVQDNCQHAV 158
           SNDGQSMSNDDLNEDDDDDTTKDSH                     ASYGQVQ+NCQHAV
Sbjct: 61  SNDGQSMSNDDLNEDDDDDTTKDSH---------------------ASYGQVQNNCQHAV 120

Query: 159 SAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARM 218
           SAAP VH GCITQPPQLELVGHSIACASNPYQDPYYAG MAAYGHQPGYPPFLGMPHARM
Sbjct: 121 SAAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARM 180

Query: 219 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS 278
           ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS
Sbjct: 181 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS 240

Query: 279 GGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEART 338
           GGRFAKKNE NSL STMKDKDSGSGQAISSHSAGSSGSEAA CALAETWNSSNGQQEART
Sbjct: 241 GGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEART 300

Query: 339 QLHEAYEARSYANGSSQFHSYSSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLA 398
           QLHEAYEARSY NGSSQFH+YSSFQASSYGLRSGERG+DGDCSGQQRSISENQAAQRRLA
Sbjct: 301 QLHEAYEARSYVNGSSQFHNYSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLA 340

Query: 399 I 400
           I
Sbjct: 361 I 340

[Close]

BLAST of Lsi10G010670 vs. ExPASy TrEMBL
Match: A0A0A0KEL9 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_6G439960 PE=3 SV=1)

HSP 1 Score: 613.6 bits (1581), Expect = 8.4e-172
Identity = 324/361 (89.75%), Postives = 332/361 (91.97%), Query Frame = 0


Query: 39  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 98
           MQSKSKSVNQLESEPPNMQ TSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 99  SNDGQSMSNDDLNEDDDDDTTKDSHGMALLAFLLAKSCYSSKKGTYASYGQVQDNCQHAV 158
           SNDGQSMSNDDLNE+DDD+TTKDSH                     AS+GQVQ NCQHAV
Sbjct: 61  SNDGQSMSNDDLNEEDDDETTKDSH---------------------ASFGQVQHNCQHAV 120

Query: 159 SAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARM 218
           SAAP VH GCITQPPQLELVGHSIACASNPYQDPYYAG MAAYGHQPGYPPFLGMPHARM
Sbjct: 121 SAAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARM 180

Query: 219 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS 278
           ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS
Sbjct: 181 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS 240

Query: 279 GGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEART 338
           GGRFAKKNE NSL STMKDKDSGSGQAISSHSAGSSGS+AAPCALAETWNSSNGQQE+RT
Sbjct: 241 GGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRT 300

Query: 339 QLHEAYEARSYANGSSQFHSYSSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLA 398
           QLHEAYEARSY NGSSQFH+YSSFQASSYGLRSGERG+DGDCSGQQRSISENQAAQRRLA
Sbjct: 301 QLHEAYEARSYMNGSSQFHNYSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLA 340

Query: 399 I 400
           I
Sbjct: 361 I 340

[Close]

BLAST of Lsi10G010670 vs. ExPASy TrEMBL
Match: A0A1S4DXQ9 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103491506 PE=3 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 5.6e-168
Identity = 323/361 (89.47%), Postives = 326/361 (90.30%), Query Frame = 0


Query: 39  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 98
           MQSKSKSVNQ ESEPPNMQ TSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 99  SNDGQSMSNDDLNEDDDDDTTKDSHGMALLAFLLAKSCYSSKKGTYASYGQVQDNCQHAV 158
           SNDGQSMSNDDLNEDDDDDTTKDSH                     ASYGQVQ+NCQHAV
Sbjct: 61  SNDGQSMSNDDLNEDDDDDTTKDSH---------------------ASYGQVQNNCQHAV 120

Query: 159 SAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARM 218
           SAAP VH GCITQPPQLEL     ACASNPYQDPYYAG MAAYGHQPGYPPFLGMPHARM
Sbjct: 121 SAAPIVHSGCITQPPQLEL-----ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARM 180

Query: 219 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS 278
           ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS
Sbjct: 181 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS 240

Query: 279 GGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEART 338
           GGRFAKKNE NSL STMKDKDSGSGQAISSHSAGSSGSEAA CALAETWNSSNGQQEART
Sbjct: 241 GGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEART 300

Query: 339 QLHEAYEARSYANGSSQFHSYSSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLA 398
           QLHEAYEARSY NGSSQFH+YSSFQASSYGLRSGERG+DGDCSGQQRSISENQAAQRRLA
Sbjct: 301 QLHEAYEARSYVNGSSQFHNYSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLA 335

Query: 399 I 400
           I
Sbjct: 361 I 335

[Close]

BLAST of Lsi10G010670 vs. ExPASy TrEMBL
Match: A0A6J1JHB5 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111484375 PE=3 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 8.1e-167
Identity = 318/362 (87.85%), Postives = 327/362 (90.33%), Query Frame = 0


Query: 39  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 98
           MQSK +SVNQLESEPPNMQ TSSYSEPWWRSIGYNHIS PAAGGN+SNSTSLEC NGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISSPAAGGNLSNSTSLECPNGASE 60

Query: 99  SNDGQSMSNDDLNEDDDDDTTKDSHGMALLAFLLAKSCYSSKKGTYASYGQVQDNCQHAV 158
           SNDG SMSNDDLNEDDDDDTTKDSH +                    SYGQVQ+NCQHAV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAV--------------------SYGQVQNNCQHAV 120

Query: 159 SAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARM 218
           SAAPTVHGGCITQPPQLELVGHSIACASN YQDPYYAG MAAYGHQPGYPPFLGMPHARM
Sbjct: 121 SAAPTVHGGCITQPPQLELVGHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARM 180

Query: 219 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS 278
           ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGS
Sbjct: 181 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGS 240

Query: 279 GGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEART 338
           GGRFAKKNE NS SST+K+KDSGSGQA SSHSAGSSGSEAAPCALAETWNSSNGQQEART
Sbjct: 241 GGRFAKKNEVNSSSSTVKNKDSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEART 300

Query: 339 QLHEAYEARSYANGSSQFHSYSSFQASSYGLRSGERGEDGDCSGQQR-SISENQAAQRRL 398
           QLHEAYEARSY NGS QFH+YSSFQASSY LRSGERG+DGDCSGQQR SISENQAAQRRL
Sbjct: 301 QLHEAYEARSYVNGSGQFHNYSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRL 342

Query: 399 AI 400
           AI
Sbjct: 361 AI 342

[Close]

BLAST of Lsi10G010670 vs. ExPASy TrEMBL
Match: A0A6J1FTP1 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111448699 PE=3 SV=1)

HSP 1 Score: 593.2 bits (1528), Expect = 1.2e-165
Identity = 317/362 (87.57%), Postives = 326/362 (90.06%), Query Frame = 0


Query: 39  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 98
           MQSK +SVNQLESEPPNMQ TSSYSEPWWRSIGYN ISPPAAGGN+SNSTSLEC NGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE 60

Query: 99  SNDGQSMSNDDLNEDDDDDTTKDSHGMALLAFLLAKSCYSSKKGTYASYGQVQDNCQHAV 158
           SNDG SMSNDDLNEDDDDDTTKDSH +                    SYGQVQ+N QHAV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAV--------------------SYGQVQNNSQHAV 120

Query: 159 SAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARM 218
           SAAPTVHGGCITQPPQLELVGHSIACASN YQDPYYAG MAAYGHQPGYPPFLGMPHARM
Sbjct: 121 SAAPTVHGGCITQPPQLELVGHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARM 180

Query: 219 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS 278
           ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGS
Sbjct: 181 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGS 240

Query: 279 GGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEART 338
           GGRFAKKNE NS SSTMK+KDSGSGQA SSHSAGSSGSEAAPCALAETWNSSNGQQEART
Sbjct: 241 GGRFAKKNEVNSSSSTMKNKDSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEART 300

Query: 339 QLHEAYEARSYANGSSQFHSYSSFQASSYGLRSGERGEDGDCSGQQR-SISENQAAQRRL 398
           QLHEAY+ARSY NGS QFH+YSSFQASSY LRSGERG+DGDCSGQQR SISENQAAQRRL
Sbjct: 301 QLHEAYKARSYVNGSEQFHNYSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRL 342

Query: 399 AI 400
           AI
Sbjct: 361 AI 342

[Close]

BLAST of Lsi10G010670 vs. NCBI nr
Match: XP_008449708.1 (PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo] >XP_008449709.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo])

HSP 1 Score: 617.1 bits (1590), Expect = 1.6e-172
Identity = 328/361 (90.86%), Postives = 331/361 (91.69%), Query Frame = 0


Query: 39  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 98
           MQSKSKSVNQ ESEPPNMQ TSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 99  SNDGQSMSNDDLNEDDDDDTTKDSHGMALLAFLLAKSCYSSKKGTYASYGQVQDNCQHAV 158
           SNDGQSMSNDDLNEDDDDDTTKDSH                     ASYGQVQ+NCQHAV
Sbjct: 61  SNDGQSMSNDDLNEDDDDDTTKDSH---------------------ASYGQVQNNCQHAV 120

Query: 159 SAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARM 218
           SAAP VH GCITQPPQLELVGHSIACASNPYQDPYYAG MAAYGHQPGYPPFLGMPHARM
Sbjct: 121 SAAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARM 180

Query: 219 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS 278
           ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS
Sbjct: 181 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS 240

Query: 279 GGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEART 338
           GGRFAKKNE NSL STMKDKDSGSGQAISSHSAGSSGSEAA CALAETWNSSNGQQEART
Sbjct: 241 GGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEART 300

Query: 339 QLHEAYEARSYANGSSQFHSYSSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLA 398
           QLHEAYEARSY NGSSQFH+YSSFQASSYGLRSGERG+DGDCSGQQRSISENQAAQRRLA
Sbjct: 301 QLHEAYEARSYVNGSSQFHNYSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLA 340

Query: 399 I 400
           I
Sbjct: 361 I 340

[Close]

BLAST of Lsi10G010670 vs. NCBI nr
Match: XP_011657641.1 (nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >XP_011657642.1 nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >XP_031743004.1 nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >XP_031743005.1 nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >KGN48130.1 hypothetical protein Csa_003198 [Cucumis sativus])

HSP 1 Score: 613.6 bits (1581), Expect = 1.7e-171
Identity = 324/361 (89.75%), Postives = 332/361 (91.97%), Query Frame = 0


Query: 39  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 98
           MQSKSKSVNQLESEPPNMQ TSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 99  SNDGQSMSNDDLNEDDDDDTTKDSHGMALLAFLLAKSCYSSKKGTYASYGQVQDNCQHAV 158
           SNDGQSMSNDDLNE+DDD+TTKDSH                     AS+GQVQ NCQHAV
Sbjct: 61  SNDGQSMSNDDLNEEDDDETTKDSH---------------------ASFGQVQHNCQHAV 120

Query: 159 SAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARM 218
           SAAP VH GCITQPPQLELVGHSIACASNPYQDPYYAG MAAYGHQPGYPPFLGMPHARM
Sbjct: 121 SAAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARM 180

Query: 219 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS 278
           ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS
Sbjct: 181 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS 240

Query: 279 GGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEART 338
           GGRFAKKNE NSL STMKDKDSGSGQAISSHSAGSSGS+AAPCALAETWNSSNGQQE+RT
Sbjct: 241 GGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRT 300

Query: 339 QLHEAYEARSYANGSSQFHSYSSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLA 398
           QLHEAYEARSY NGSSQFH+YSSFQASSYGLRSGERG+DGDCSGQQRSISENQAAQRRLA
Sbjct: 301 QLHEAYEARSYMNGSSQFHNYSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLA 340

Query: 399 I 400
           I
Sbjct: 361 I 340

[Close]

BLAST of Lsi10G010670 vs. NCBI nr
Match: XP_038901586.1 (nuclear transcription factor Y subunit A-1-like isoform X1 [Benincasa hispida] >XP_038901587.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Benincasa hispida] >XP_038901588.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Benincasa hispida] >XP_038901589.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 606.3 bits (1562), Expect = 2.8e-169
Identity = 324/361 (89.75%), Postives = 329/361 (91.14%), Query Frame = 0


Query: 39  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 98
           MQSKSKSVNQLESEPPNMQ TS Y+EPWWRSIGYNHISPP AGGN+SNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQLESEPPNMQQTSGYTEPWWRSIGYNHISPP-AGGNLSNSTSLECTNGASE 60

Query: 99  SNDGQSMSNDDLNEDDDDDTTKDSHGMALLAFLLAKSCYSSKKGTYASYGQVQDNCQHAV 158
           SNDGQSMSNDDLNEDDDDDTTKDSH                     ASYGQVQ NCQ AV
Sbjct: 61  SNDGQSMSNDDLNEDDDDDTTKDSH---------------------ASYGQVQHNCQLAV 120

Query: 159 SAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARM 218
           SAAPTVHGGC+TQPPQLELVGHSIACASNPYQDPYYAG MAAYGHQPGYPPFLGMPHARM
Sbjct: 121 SAAPTVHGGCVTQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARM 180

Query: 219 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS 278
           ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS
Sbjct: 181 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS 240

Query: 279 GGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEART 338
           GGRFAKKNEANSLSSTMKDKDS SGQAISSHSAGSSGSEAAPCALAETWNSS+GQQEART
Sbjct: 241 GGRFAKKNEANSLSSTMKDKDSASGQAISSHSAGSSGSEAAPCALAETWNSSSGQQEART 300

Query: 339 QLHEAYEARSYANGSSQFHSYSSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLA 398
           QLHEAYEARSY N  SQFH+YSSFQASSYGLRSGERGEDGDCSGQQRSISENQA QRRLA
Sbjct: 301 QLHEAYEARSYVNHGSQFHNYSSFQASSYGLRSGERGEDGDCSGQQRSISENQAGQRRLA 339

Query: 399 I 400
           I
Sbjct: 361 I 339

[Close]

BLAST of Lsi10G010670 vs. NCBI nr
Match: XP_008449711.1 (PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo] >XP_016900766.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo])

HSP 1 Score: 600.9 bits (1548), Expect = 1.2e-167
Identity = 323/361 (89.47%), Postives = 326/361 (90.30%), Query Frame = 0


Query: 39  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 98
           MQSKSKSVNQ ESEPPNMQ TSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 99  SNDGQSMSNDDLNEDDDDDTTKDSHGMALLAFLLAKSCYSSKKGTYASYGQVQDNCQHAV 158
           SNDGQSMSNDDLNEDDDDDTTKDSH                     ASYGQVQ+NCQHAV
Sbjct: 61  SNDGQSMSNDDLNEDDDDDTTKDSH---------------------ASYGQVQNNCQHAV 120

Query: 159 SAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARM 218
           SAAP VH GCITQPPQLEL     ACASNPYQDPYYAG MAAYGHQPGYPPFLGMPHARM
Sbjct: 121 SAAPIVHSGCITQPPQLEL-----ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARM 180

Query: 219 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS 278
           ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS
Sbjct: 181 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS 240

Query: 279 GGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEART 338
           GGRFAKKNE NSL STMKDKDSGSGQAISSHSAGSSGSEAA CALAETWNSSNGQQEART
Sbjct: 241 GGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEART 300

Query: 339 QLHEAYEARSYANGSSQFHSYSSFQASSYGLRSGERGEDGDCSGQQRSISENQAAQRRLA 398
           QLHEAYEARSY NGSSQFH+YSSFQASSYGLRSGERG+DGDCSGQQRSISENQAAQRRLA
Sbjct: 301 QLHEAYEARSYVNGSSQFHNYSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLA 335

Query: 399 I 400
           I
Sbjct: 361 I 335

[Close]

BLAST of Lsi10G010670 vs. NCBI nr
Match: KAG7010273.1 (Nuclear transcription factor Y subunit A-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 597.8 bits (1540), Expect = 9.8e-167
Identity = 319/362 (88.12%), Postives = 327/362 (90.33%), Query Frame = 0


Query: 39  MQSKSKSVNQLESEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 98
           MQSK +SVNQLESEPPNMQ TSSYSEPWWRSIGYNHISPPAAGGN+SNSTSLEC NGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASE 60

Query: 99  SNDGQSMSNDDLNEDDDDDTTKDSHGMALLAFLLAKSCYSSKKGTYASYGQVQDNCQHAV 158
           SNDG SMSNDDLNEDDDDDTTKDSH +                    SYGQVQ+N QHAV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAV--------------------SYGQVQNNSQHAV 120

Query: 159 SAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQPGYPPFLGMPHARM 218
           SAAPTVHGGCITQPPQLELVGHSIACASN YQDPYYAG MAAYGHQPGYPPFLGMPHARM
Sbjct: 121 SAAPTVHGGCITQPPQLELVGHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARM 180

Query: 219 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGS 278
           ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGS
Sbjct: 181 ALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGS 240

Query: 279 GGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEART 338
           GGRFAKKNE NS SSTMK+KDSGSGQA SSHSAGSSGSEAAPCALAETWNSSNGQQEART
Sbjct: 241 GGRFAKKNEVNSSSSTMKNKDSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEART 300

Query: 339 QLHEAYEARSYANGSSQFHSYSSFQASSYGLRSGERGEDGDCSGQQR-SISENQAAQRRL 398
           QLHEAYEARSY NGS QFH+YSSFQASSY LRSGERG+DGDCSGQQR SISENQAAQRRL
Sbjct: 301 QLHEAYEARSYVNGSGQFHNYSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRL 342

Query: 399 AI 400
           AI
Sbjct: 361 AI 342

[Close]

BLAST of Lsi10G010670 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 203.0 bits (515), Expect = 6.6e-52
Identity = 138/294 (46.94%), Postives = 173/294 (58.84%), Query Frame = 0


Query: 39  MQSKSKSVNQLE-SEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGAS 98
           MQSK    N+ E +    +Q    Y+EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 99  ESNDGQSMSNDDLNEDDDDDTTKDSHGMALLAFLLAKSCYSSKKGTYASYGQVQDNCQHA 158
           ESND  S S D     ++D T KDS           ++  SS+   +   G         
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDS-----------QAATSSRSDNHGMEG------NDP 120

Query: 159 VSAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQP-GYPPFLGMPHA 218
             +   +H   + QPP  ELVGH IAC  NPYQDPYY G M AYGHQ  G+ P+LGMP  
Sbjct: 121 ALSIRNMHDQPLVQPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRE 180

Query: 219 RMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRAR 278
           R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR
Sbjct: 181 RTALPLDMAQEPVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRAR 240

Query: 279 GSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS 331
            SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Sbjct: 241 ASGGRFAKKSEVEA------GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 268

[Close]

BLAST of Lsi10G010670 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 203.0 bits (515), Expect = 6.6e-52
Identity = 138/294 (46.94%), Postives = 173/294 (58.84%), Query Frame = 0


Query: 39  MQSKSKSVNQLE-SEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGAS 98
           MQSK    N+ E +    +Q    Y+EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 99  ESNDGQSMSNDDLNEDDDDDTTKDSHGMALLAFLLAKSCYSSKKGTYASYGQVQDNCQHA 158
           ESND  S S D     ++D T KDS           ++  SS+   +   G         
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDS-----------QAATSSRSDNHGMEG------NDP 120

Query: 159 VSAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQP-GYPPFLGMPHA 218
             +   +H   + QPP  ELVGH IAC  NPYQDPYY G M AYGHQ  G+ P+LGMP  
Sbjct: 121 ALSIRNMHDQPLVQPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRE 180

Query: 219 RMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRAR 278
           R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR
Sbjct: 181 RTALPLDMAQEPVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRAR 240

Query: 279 GSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS 331
            SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Sbjct: 241 ASGGRFAKKSEVEA------GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 268

[Close]

BLAST of Lsi10G010670 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 201.4 bits (511), Expect = 1.9e-51
Identity = 136/294 (46.26%), Postives = 175/294 (59.52%), Query Frame = 0


Query: 39  MQSKSKSVNQLE-SEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGAS 98
           MQSK    N+ E +    +Q    Y+EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 99  ESNDGQSMSNDDLNEDDDDDTTKDSHGMALLAFLLAKSCYSSKKGTYASYGQVQDNCQHA 158
           ESND  S S D     ++D T KDS               ++   +  ++G   ++   +
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQA-------------ATSSRSVDNHGMEGNDPALS 120

Query: 159 VSAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQP-GYPPFLGMPHA 218
           +     +H   + QPP  ELVGH IAC  NPYQDPYY G M AYGHQ  G+ P+LGMP  
Sbjct: 121 IR---NMHDQPLVQPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRE 180

Query: 219 RMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRAR 278
           R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR
Sbjct: 181 RTALPLDMAQEPVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRAR 240

Query: 279 GSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS 331
            SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Sbjct: 241 ASGGRFAKKSEVEA------GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of Lsi10G010670 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 201.4 bits (511), Expect = 1.9e-51
Identity = 136/294 (46.26%), Postives = 175/294 (59.52%), Query Frame = 0


Query: 39  MQSKSKSVNQLE-SEPPNMQHTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGAS 98
           MQSK    N+ E +    +Q    Y+EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 99  ESNDGQSMSNDDLNEDDDDDTTKDSHGMALLAFLLAKSCYSSKKGTYASYGQVQDNCQHA 158
           ESND  S S D     ++D T KDS               ++   +  ++G   ++   +
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQA-------------ATSSRSVDNHGMEGNDPALS 120

Query: 159 VSAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGAMAAYGHQP-GYPPFLGMPHA 218
           +     +H   + QPP  ELVGH IAC  NPYQDPYY G M AYGHQ  G+ P+LGMP  
Sbjct: 121 IR---NMHDQPLVQPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRE 180

Query: 219 RMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRAR 278
           R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR
Sbjct: 181 RTALPLDMAQEPVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRAR 240

Query: 279 GSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS 331
            SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Sbjct: 241 ASGGRFAKKSEVEA------GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of Lsi10G010670 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 182.2 bits (461), Expect = 1.2e-45
Identity = 157/371 (42.32%), Postives = 194/371 (52.29%), Query Frame = 0


Query: 37  EGMQSKSKS-VNQLESEPPNMQHTSSYS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECT 96
           E M SKS S  N+++SE      +S  S  PW R +   N  S   AG   S S +L   
Sbjct: 4   EDMHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL--- 63

Query: 97  NGASESNDGQSMSNDD--LNEDDDDDTTKDSHGMALLAFLLAKSCYSSKKGTYASYGQVQ 156
             A ESN  +S SN D  +N++    T+  S G            YS K           
Sbjct: 64  --ALESNGSKSPSNRDNTVNKESQVTTSPQSAG-----------DYSDKN---------- 123

Query: 157 DNCQHAVSAAPTVHGGCITQPPQLELVGHSIACA-SNPYQDPYYAGAMAAYGHQP-GYPP 216
                      ++H G    PP  +LVGH++  A SNPYQDPYYAG M AYGH P G+ P
Sbjct: 124 ---------QESLHHGITQPPPHPQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVP 183

Query: 217 FLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQ 276
           + GMPH+RM LP E+ QEPVFVNAKQYQ ILRRRQARAKAE+E KLIK RKPYLHESRHQ
Sbjct: 184 YGGMPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQ 243

Query: 277 HAMRRARGSGGRFAKKNEANSLSSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNS 336
           HAMRR RG+GGRFAKK   N+ +S  K ++  +G    S S+ +S          E W  
Sbjct: 244 HAMRRPRGTGGRFAKK--TNTEASKRKAEEKSNGHVTQSPSSSNSDQ-------GEAW-- 302

Query: 337 SNGQQEARTQLHEAYEARSYANGSSQFHSYSSFQASSYGLRSGERGEDGDCSGQQ-RSIS 396
                                NG  +       Q+S+Y     +R E+G+CSGQQ  S+S
Sbjct: 304 ---------------------NGDYRTPQGDEMQSSAY-----KRREEGECSGQQWNSLS 302

Query: 397 ENQAAQRRLAI 400
            N  +Q RLAI
Sbjct: 364 SNHPSQARLAI 302

The following BLAST results are available for this feature:

BLAST of Lsi10G010670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXV5	2.7e-50	46.26	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	1.7e-44	42.32	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	5.8e-21	46.43	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	1.3e-20	48.44	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LVJ7	2.9e-20	55.66	Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Lsi10G010670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BNK4	7.6e-173	90.86	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103491506 P...	[more]
A0A0A0KEL9	8.4e-172	89.75	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_6G43996...	[more]
A0A1S4DXQ9	5.6e-168	89.47	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103491506 P...	[more]
A0A6J1JHB5	8.1e-167	87.85	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114843...	[more]
A0A6J1FTP1	1.2e-165	87.57	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]

BLAST of Lsi10G010670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449708.1	1.6e-172	90.86	PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis m...	[more]
XP_011657641.1	1.7e-171	89.75	nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >XP_0116...	[more]
XP_038901586.1	2.8e-169	89.75	nuclear transcription factor Y subunit A-1-like isoform X1 [Benincasa hispida] >...	[more]
XP_008449711.1	1.2e-167	89.47	PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis m...	[more]
KAG7010273.1	9.8e-167	88.12	Nuclear transcription factor Y subunit A-1 [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Lsi10G010670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12840.2	6.6e-52	46.94	nuclear factor Y, subunit A1	[more]
AT5G12840.4	6.6e-52	46.94	nuclear factor Y, subunit A1	[more]
AT5G12840.1	1.9e-51	46.26	nuclear factor Y, subunit A1	[more]
AT5G12840.3	1.9e-51	46.26	nuclear factor Y, subunit A1	[more]
AT3G20910.1	1.2e-45	42.32	nuclear factor Y, subunit A9	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 228..250 score: 74.15 coord: 259..282 score: 81.94
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 224..285 e-value: 2.3E-35 score: 133.5
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 227..282 e-value: 3.9E-26 score: 91.4
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 68..388
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 225..285 score: 36.156738
None	No IPR available	GENE3D	6.10.250.2430		coord: 225..287 e-value: 6.4E-30 score: 105.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 368..389
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 285..315
None	No IPR available	PANTHER	PTHR12632:SF59	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9	coord: 68..388
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 230..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G010670.1	Lsi10G010670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity