Lsi10G009450 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi10G009450
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCalmodulin
Locationchr10: 13873535 .. 13876556 (+)
RNA-Seq ExpressionLsi10G009450
SyntenyLsi10G009450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAAAGCAATTAATTTGGAGACATAAAAACAAAAGAATAATAATAAAAGGAAAATGGAATAAAAGAGAGGGAAAGGGAAAAAAAATTATATAATTAGAGGAGAGAAGAGGAGGTGATGCCCGAGATTTGGACCACCTCCTCCTCCTCCTCCTTGTTTATGATTCTCCTATTTATATGCCCTTCGCTGCTTTTACCATTCTGACTTCCGCCTCGTCTGGATCTCTCCCTTCTTATTTTCCTCCTCCTTCCCCTTCCACTCTCATTTCCCTTCCACATCAATTTCCATGGCTGACCAGCTCACCGATGATCAGATCTCCGAGTTCAAGGAGGCCTTCAGTTTGTTCGACAAGGACGGCGATGGTTTGTTTCTTTCAGATCCCTTCTCCTTTCGCCTTCTTCTTTTTCTTTTAATGATTTATCATCCTCCCTATTTTAGATCTATTTTCGTGCTCATGGAATTGTTATATCGTCGTTGCTATCTATTATCATACCCCTGTTGCCTATTACGATGAATTATTTTCTTTTTCGATGTGTTTTTGTTTCGTGTTCCTGGGTTTTCTCGATCCGTTTCTGTTATCTTGGATTGTGGATTACGATGAACATTCCGTGATTAGGAAGCTTGGAAATCATGGATGGATGGCATGTTGATTTGAAAATTTTCGTTTGAAGATGATTCTTCATAGGTTGTGTATTATAGTTTGGAATCTGGAGAATGATTCATACGCGCGCGCGCACACACATATATATGGCATTTTAGTTGATATATTATTACCACCGACGCCTCGTCAGGCAGTGGAAATAACCTGTGGATCGTTGCTTTTCTGTACCTTATGACTTTTGAGGCGGTTTACGTTACAGGGAACGATACATTTCTCCACCCTGGCGTCGTTTATGGGCTGCTTGTTTACCCTCCATATATGTTACTATATGATTCATTATGCTTAATAAGTATGCACGTCTGCCCTTCGAGTTCAGGATTAACATGGTAGACATGTCCATTAGTTAGATGGATGTTTGGAATTCATTTAGTAATATATATGGTATGATCAGCAAATCTGGCAATTAGCCCTTGGAATTTATGTAGAATCCTCTCATTAACAGGACTTCTCCCTGTAATTTTATCATCCGTCCTTCATTCTATTTGAAATCAGCTGTGTGTTTTCAAAATAGTTAAAGGTGTGATAGACGGGGTATCTCTAGAGAATGCTGATATATAAACAACGCTAGTCTATGGAAAACAGTTTCTTCCTTTGAACTTTTTTATGAAGTTTTTCTAACAAATTCATAGCTGCATGAGTTGTTAAAGAAAGCAGTTGCGGCCTTCAAGTCTTTCTTGCTTCATTATCTTGTGGGTTTGACTTCCTATTTAAATGTCTTTGTTGTTTTCTGTCTATTAGTGTTTACTGTACGGAGAATCAGCAACTAGACATTTGAAAGTCTCCTATAGGGTTTAAATTCTATGTATTGGACCATGTTGCCTGCATACTGTTTAGCAAATATTAATTGATTTTGCATATTCCATTAAGTGGTAATCTCTCTGTAATGTTGGCCTACGTATTTTGTTTGTGTATCTCTCTCAATTTCAGTCTGAATTGTTAAGCATGGGTTAAAATTAAATTAGATACATTCGTTGGTTTGTAAGGGAACTGAAGCTGTTTGGAACAGTTCACAATGAGCACAAAGATGTGTTCCTAACATTCGCAACTGTAGGAACATTGAGAGGACAAAAAAGATTGGATTTGATTAACAAGTGCTCTTTTGAATTTGCTGGGTCGACTTCCTGACAACATTTAATCCAAGTCTGCTACTACTTTGAGATATCCTACCAAGCACTCGCACTAATTCTTTCCCCTTGTCTCTTTATTGTAACCTGCTCCATTGAATTCATTAAACATTATACTTCTCAAGACTAACTTGTATTTGATCAAACATAAGCACTACTCAACTGGTCAAGGCATATACGTTCAACCAAAAGGTCAAAAGTTCAAATCTGCACCCTGATATGTTGCTTAACTAAAAAAAGACTAACATGATTGCCTAGACCTGTTGGCATTTTATATTACTGGAAGTTTATGCTTACTACATATTTCAGCCACACGCAGATGAACTTTATGTCATTCTCAGTTACTCCATAATCTTTGAAATTTCCATTTTGCTGTAACATATGTTGTCCTCTCAATTTTCGTTCTAGTTTATGGTTATTGGTTCTGCTTGGATAAATCAGATGTTGAGTCTGTCCTATTTTTCTTATCATCTTTTTTTCAATTCTTTATAGGCTGCATCACCACCAAGGAACTGGGGACTGTAATGCGGTCATTGGGCCAGAATCCAACTGAAGCTGAGCTACAAGACATGATCAATGAAGTTGATGCTGATGGAAATGGAACTATTGATTTTCCTGAGTTTCTTAATCTGATGGCAAGAAAAATGAAGGACACTGATTCAGAGGAGGAGCTCAAGGAAGCTTTCCGTGTGTTTGATAAAGATCAGAATGGGTTCATTTCTGCCGCCGAGCTCCGGCATGTAATGACGAATCTTGGTGAGAAGTTGACAGACGAGGAAGTTGATGAAATGATCCGTGAGGCAGATGTTGACGGCGATGGACAAATCAACTATGAGGAATTTGTCAAAGTCATGATGGCCAAGTGAGAATCAATCAACTGAAATCTTAAACCTTAATCTGCTTGAAAATGAAGAGGGATATGGGCAGATAAGTTGATGATATGATTTGTTTTCCCATTTAGGTTGTCTCCATTTTGTTTTACTATCTATGTTTGTCTCTCTCGTTTCCATTATTTGCGGTACTGTTTTTCAGTATCCTGTTTCTTTGCTGCAACGATTTCTGTAGTTTGGCATGGCTGTTCGTGTCGGTAGTCTCTTTAATTTTTAATATTTCTTTTTACCTGTGATGCTATGAACCCAGAAAACCATTGGTTGATCGAATCAGAAGATTTTGCTTGTCTCTAGTTTCCCAAACTTCCCATCCTTTTTTTGGCGATCAAATTTTCCTTTGCCTGAGAA

mRNA sequence

TAAAAAGCAATTAATTTGGAGACATAAAAACAAAAGAATAATAATAAAAGGAAAATGGAATAAAAGAGAGGGAAAGGGAAAAAAAATTATATAATTAGAGGAGAGAAGAGGAGGTGATGCCCGAGATTTGGACCACCTCCTCCTCCTCCTCCTTGTTTATGATTCTCCTATTTATATGCCCTTCGCTGCTTTTACCATTCTGACTTCCGCCTCGTCTGGATCTCTCCCTTCTTATTTTCCTCCTCCTTCCCCTTCCACTCTCATTTCCCTTCCACATCAATTTCCATGGCTGACCAGCTCACCGATGATCAGATCTCCGAGTTCAAGGAGGCCTTCAGTTTGTTCGACAAGGACGGCGATGGGAACGATACATTTCTCCACCCTGGCGTCGTTTATGGGCTGCTTGTTTACCCTCCATATATGTTACTATATGATTCATTATGCTTAATAAGCTGCATCACCACCAAGGAACTGGGGACTGTAATGCGGTCATTGGGCCAGAATCCAACTGAAGCTGAGCTACAAGACATGATCAATGAAGTTGATGCTGATGGAAATGGAACTATTGATTTTCCTGAGTTTCTTAATCTGATGGCAAGAAAAATGAAGGACACTGATTCAGAGGAGGAGCTCAAGGAAGCTTTCCGTGTGTTTGATAAAGATCAGAATGGGTTCATTTCTGCCGCCGAGCTCCGGCATGTAATGACGAATCTTGGTGAGAAGTTGACAGACGAGGAAGTTGATGAAATGATCCGTGAGGCAGATGTTGACGGCGATGGACAAATCAACTATGAGGAATTTGTCAAAGTCATGATGGCCAAGTGAGAATCAATCAACTGAAATCTTAAACCTTAATCTGCTTGAAAATGAAGAGGGATATGGGCAGATAAGTTGATGATATGATTTGTTTTCCCATTTAGGTTGTCTCCATTTTGTTTTACTATCTATGTTTGTCTCTCTCGTTTCCATTATTTGCGGTACTGTTTTTCAGTATCCTGTTTCTTTGCTGCAACGATTTCTGTAGTTTGGCATGGCTGTTCGTGTCGGTAGTCTCTTTAATTTTTAATATTTCTTTTTACCTGTGATGCTATGAACCCAGAAAACCATTGGTTGATCGAATCAGAAGATTTTGCTTGTCTCTAGTTTCCCAAACTTCCCATCCTTTTTTTGGCGATCAAATTTTCCTTTGCCTGAGAA

Coding sequence (CDS)

ATGGCTGACCAGCTCACCGATGATCAGATCTCCGAGTTCAAGGAGGCCTTCAGTTTGTTCGACAAGGACGGCGATGGGAACGATACATTTCTCCACCCTGGCGTCGTTTATGGGCTGCTTGTTTACCCTCCATATATGTTACTATATGATTCATTATGCTTAATAAGCTGCATCACCACCAAGGAACTGGGGACTGTAATGCGGTCATTGGGCCAGAATCCAACTGAAGCTGAGCTACAAGACATGATCAATGAAGTTGATGCTGATGGAAATGGAACTATTGATTTTCCTGAGTTTCTTAATCTGATGGCAAGAAAAATGAAGGACACTGATTCAGAGGAGGAGCTCAAGGAAGCTTTCCGTGTGTTTGATAAAGATCAGAATGGGTTCATTTCTGCCGCCGAGCTCCGGCATGTAATGACGAATCTTGGTGAGAAGTTGACAGACGAGGAAGTTGATGAAATGATCCGTGAGGCAGATGTTGACGGCGATGGACAAATCAACTATGAGGAATTTGTCAAAGTCATGATGGCCAAGTGA

Protein sequence

MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYDSLCLISCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Homology
[Close]
BLAST of Lsi10G009450 vs. ExPASy Swiss-Prot
Match: P62200 (Calmodulin-1/11/16 OS=Daucus carota OX=4039 GN=CAM-1 PE=2 SV=2)

HSP 1 Score: 278.5 bits (711), Expect = 5.4e-74
Identity = 149/179 (83.24%), Postives = 149/179 (83.24%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYDSLCLISCITT 60
           MADQLTDDQISEFKEAFSLFDKDGDG                              CITT
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDG------------------------------CITT 60

Query: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120
           KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF
Sbjct: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120

Query: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 180
           RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]
BLAST of Lsi10G009450 vs. ExPASy Swiss-Prot
Match: P62199 (Calmodulin-1 OS=Petunia hybrida OX=4102 GN=CAM81 PE=1 SV=2)

HSP 1 Score: 278.5 bits (711), Expect = 5.4e-74
Identity = 149/179 (83.24%), Postives = 149/179 (83.24%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYDSLCLISCITT 60
           MADQLTDDQISEFKEAFSLFDKDGDG                              CITT
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDG------------------------------CITT 60

Query: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120
           KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF
Sbjct: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120

Query: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 180
           RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]
BLAST of Lsi10G009450 vs. ExPASy Swiss-Prot
Match: P59220 (Calmodulin-7 OS=Arabidopsis thaliana OX=3702 GN=CAM7 PE=1 SV=2)

HSP 1 Score: 278.5 bits (711), Expect = 5.4e-74
Identity = 149/179 (83.24%), Postives = 149/179 (83.24%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYDSLCLISCITT 60
           MADQLTDDQISEFKEAFSLFDKDGDG                              CITT
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDG------------------------------CITT 60

Query: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120
           KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF
Sbjct: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120

Query: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 180
           RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]
BLAST of Lsi10G009450 vs. ExPASy Swiss-Prot
Match: P62202 (Calmodulin OS=Bryonia dioica OX=3652 PE=2 SV=2)

HSP 1 Score: 278.5 bits (711), Expect = 5.4e-74
Identity = 149/179 (83.24%), Postives = 149/179 (83.24%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYDSLCLISCITT 60
           MADQLTDDQISEFKEAFSLFDKDGDG                              CITT
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDG------------------------------CITT 60

Query: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120
           KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF
Sbjct: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120

Query: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 180
           RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]
BLAST of Lsi10G009450 vs. ExPASy Swiss-Prot
Match: Q7Y052 (Calmodulin OS=Euphorbia characias OX=3991 PE=2 SV=4)

HSP 1 Score: 278.5 bits (711), Expect = 5.4e-74
Identity = 149/179 (83.24%), Postives = 149/179 (83.24%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYDSLCLISCITT 60
           MADQLTDDQISEFKEAFSLFDKDGDG                              CITT
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDG------------------------------CITT 60

Query: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120
           KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF
Sbjct: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120

Query: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 180
           RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]
BLAST of Lsi10G009450 vs. ExPASy TrEMBL
Match: A0A4S4ENA1 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_018768 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.1e-74
Identity = 157/180 (87.22%), Postives = 159/180 (88.33%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYD-SLCLISCIT 60
           MADQLTDDQISEFKEAFSLFDKDGDG    L   +   +  Y  Y LL D S C   CIT
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGQILSLSIYIYIYIFTY-EYDLLSDLSFC---CIT 60

Query: 61  TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEA 120
           TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEA
Sbjct: 61  TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEA 120

Query: 121 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 180
           FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 176

[Close]
BLAST of Lsi10G009450 vs. ExPASy TrEMBL
Match: A0A3N6R346 (Uncharacterized protein OS=Brassica cretica OX=69181 GN=DY000_00013553 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.5e-74
Identity = 154/179 (86.03%), Postives = 158/179 (88.27%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYDSLCLISCITT 60
           MADQLTDDQISEFKEAFSLFDKDGDG  + L P         PP      ++  ISCITT
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGTFSLLQP---------PP------NVRDISCITT 60

Query: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120
           KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF
Sbjct: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120

Query: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 180
           RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMI+EADVDGDGQINYEEFVKVMMAK
Sbjct: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVMMAK 164

[Close]
BLAST of Lsi10G009450 vs. ExPASy TrEMBL
Match: A0A7J8R7W9 (Uncharacterized protein OS=Gossypium davidsonii OX=34287 GN=Godav_010791 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.9e-74
Identity = 155/183 (84.70%), Postives = 162/183 (88.52%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYDSLC----LIS 60
           MADQLTDDQISEFKEAFSLFDKDGDG   FLH  +    L++   ++L+ S       I 
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDG--PFLH--LSLSSLLFSETIVLFPSFVSNTRYIG 60

Query: 61  CITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEEL 120
           CITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEEL
Sbjct: 61  CITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEEL 120

Query: 121 KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 180
           KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVM
Sbjct: 121 KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVM 179

[Close]
BLAST of Lsi10G009450 vs. ExPASy TrEMBL
Match: A0A6N2C353 (Uncharacterized protein OS=Solanum chilense OX=4083 GN=EJD97_000200 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.3e-74
Identity = 156/179 (87.15%), Postives = 157/179 (87.71%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYDSLCLISCITT 60
           MADQLTDDQISEFKEAFSLFDKDGDG             LVY P+  LY     I CITT
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDG-------------LVY-PFRSLY-----IGCITT 60

Query: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120
           KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF
Sbjct: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120

Query: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 180
           RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 160

[Close]
BLAST of Lsi10G009450 vs. ExPASy TrEMBL
Match: A0A151R619 (Calmodulin OS=Cajanus cajan OX=3821 GN=KK1_040824 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.3e-74
Identity = 151/179 (84.36%), Postives = 160/179 (89.39%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYDSLCLISCITT 60
           MADQLTDDQI+EFKEAFSLFDKDGD  D F    +++G  ++  + L   ++    CITT
Sbjct: 1   MADQLTDDQIAEFKEAFSLFDKDGD--DFFC--ALIFGFGIWFSFFLDIFTIVTFCCITT 60

Query: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120
           KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF
Sbjct: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120

Query: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 180
           RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 175

[Close]
BLAST of Lsi10G009450 vs. NCBI nr
Match: KAG6771105.1 (hypothetical protein POTOM_022451 [Populus tomentosa])

HSP 1 Score: 295.4 bits (755), Expect = 3.2e-76
Identity = 156/179 (87.15%), Postives = 160/179 (89.39%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYDSLCLISCITT 60
           MADQLTDDQISEFKEAFSLFDKDGDG    L   +  G+L+   Y+      CLI CITT
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGMFLDLSFALFLGVLLLSLYV-----FCLICCITT 60

Query: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120
           KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF
Sbjct: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120

Query: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 180
           RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 174

[Close]
BLAST of Lsi10G009450 vs. NCBI nr
Match: KAF3652205.1 (Calmodulin [Capsicum annuum])

HSP 1 Score: 290.0 bits (741), Expect = 1.4e-74
Identity = 155/178 (87.08%), Postives = 160/178 (89.89%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYDSLCLISCITT 60
           MADQLTDDQISEFKEAFSLFDKDGDG     +  ++Y LLV     L+   LC I CITT
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGWSKLRNKVILYLLLVGSDSKLI-AKLC-IGCITT 60

Query: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120
           KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA+KMKDTDSEEELKEAF
Sbjct: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDTDSEEELKEAF 120

Query: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 179
           RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA
Sbjct: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 176

[Close]
BLAST of Lsi10G009450 vs. NCBI nr
Match: THG18163.1 (hypothetical protein TEA_018768 [Camellia sinensis var. sinensis])

HSP 1 Score: 289.3 bits (739), Expect = 2.3e-74
Identity = 157/180 (87.22%), Postives = 159/180 (88.33%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYD-SLCLISCIT 60
           MADQLTDDQISEFKEAFSLFDKDGDG    L   +   +  Y  Y LL D S C   CIT
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGQILSLSIYIYIYIFTY-EYDLLSDLSFC---CIT 60

Query: 61  TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEA 120
           TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEA
Sbjct: 61  TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEA 120

Query: 121 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 180
           FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 176

[Close]
BLAST of Lsi10G009450 vs. NCBI nr
Match: KAF3554074.1 (hypothetical protein F2Q69_00014951, partial [Brassica cretica])

HSP 1 Score: 288.9 bits (738), Expect = 3.0e-74
Identity = 154/179 (86.03%), Postives = 158/179 (88.27%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYDSLCLISCITT 60
           MADQLTDDQISEFKEAFSLFDKDGDG  + L P         PP      ++  ISCITT
Sbjct: 10  MADQLTDDQISEFKEAFSLFDKDGDGTFSLLQP---------PP------NVRDISCITT 69

Query: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120
           KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF
Sbjct: 70  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 129

Query: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 180
           RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMI+EADVDGDGQINYEEFVKVMMAK
Sbjct: 130 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVMMAK 173

[Close]
BLAST of Lsi10G009450 vs. NCBI nr
Match: KAF3576228.1 (hypothetical protein DY000_02032454 [Brassica cretica])

HSP 1 Score: 288.9 bits (738), Expect = 3.0e-74
Identity = 154/179 (86.03%), Postives = 158/179 (88.27%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYDSLCLISCITT 60
           MADQLTDDQISEFKEAFSLFDKDGDG  + L P         PP      ++  ISCITT
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGTFSLLQP---------PP------NVRDISCITT 60

Query: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120
           KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF
Sbjct: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120

Query: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 180
           RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMI+EADVDGDGQINYEEFVKVMMAK
Sbjct: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVMMAK 164

[Close]
BLAST of Lsi10G009450 vs. TAIR 10
Match: AT2G41110.2 (calmodulin 2 )

HSP 1 Score: 286.2 bits (731), Expect = 1.8e-77
Identity = 150/179 (83.80%), Postives = 158/179 (88.27%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYDSLCLISCITT 60
           MADQLTDDQISEFKEAFSLFDKDGDG             +++PP+  +     ++ CITT
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDG-------------MLHPPFPSI-----IVGCITT 60

Query: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120
           KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF
Sbjct: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120

Query: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 180
           RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMI+EADVDGDGQINYEEFVKVMMAK
Sbjct: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVMMAK 161

[Close]
BLAST of Lsi10G009450 vs. TAIR 10
Match: AT3G43810.1 (calmodulin 7 )

HSP 1 Score: 278.5 bits (711), Expect = 3.8e-75
Identity = 149/179 (83.24%), Postives = 149/179 (83.24%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYDSLCLISCITT 60
           MADQLTDDQISEFKEAFSLFDKDGDG                              CITT
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDG------------------------------CITT 60

Query: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120
           KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF
Sbjct: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120

Query: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 180
           RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]
BLAST of Lsi10G009450 vs. TAIR 10
Match: AT2G41110.1 (calmodulin 2 )

HSP 1 Score: 277.3 bits (708), Expect = 8.5e-75
Identity = 148/179 (82.68%), Postives = 149/179 (83.24%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYDSLCLISCITT 60
           MADQLTDDQISEFKEAFSLFDKDGDG                              CITT
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDG------------------------------CITT 60

Query: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120
           KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF
Sbjct: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120

Query: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 180
           RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMI+EADVDGDGQINYEEFVKVMMAK
Sbjct: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVMMAK 149

[Close]
BLAST of Lsi10G009450 vs. TAIR 10
Match: AT2G27030.1 (calmodulin 5 )

HSP 1 Score: 277.3 bits (708), Expect = 8.5e-75
Identity = 148/179 (82.68%), Postives = 149/179 (83.24%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYDSLCLISCITT 60
           MADQLTDDQISEFKEAFSLFDKDGDG                              CITT
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDG------------------------------CITT 60

Query: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120
           KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF
Sbjct: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120

Query: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 180
           RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMI+EADVDGDGQINYEEFVKVMMAK
Sbjct: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVMMAK 149

[Close]
BLAST of Lsi10G009450 vs. TAIR 10
Match: AT2G27030.3 (calmodulin 5 )

HSP 1 Score: 277.3 bits (708), Expect = 8.5e-75
Identity = 148/179 (82.68%), Postives = 149/179 (83.24%), Query Frame = 0 

Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGNDTFLHPGVVYGLLVYPPYMLLYDSLCLISCITT 60
           MADQLTDDQISEFKEAFSLFDKDGDG                              CITT
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDG------------------------------CITT 60

Query: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120
           KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF
Sbjct: 61  KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAF 120

Query: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 180
           RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMI+EADVDGDGQINYEEFVKVMMAK
Sbjct: 121 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVMMAK 149

The following BLAST results are available for this feature:
BLAST of Lsi10G009450 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P622005.4e-7483.24Calmodulin-1/11/16 OS=Daucus carota OX=4039 GN=CAM-1 PE=2 SV=2[more]
P621995.4e-7483.24Calmodulin-1 OS=Petunia hybrida OX=4102 GN=CAM81 PE=1 SV=2[more]
P592205.4e-7483.24Calmodulin-7 OS=Arabidopsis thaliana OX=3702 GN=CAM7 PE=1 SV=2[more]
P622025.4e-7483.24Calmodulin OS=Bryonia dioica OX=3652 PE=2 SV=2[more]
Q7Y0525.4e-7483.24Calmodulin OS=Euphorbia characias OX=3991 PE=2 SV=4[more]
BLAST of Lsi10G009450 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A4S4ENA11.1e-7487.22Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0187... [more]
A0A3N6R3461.5e-7486.03Uncharacterized protein OS=Brassica cretica OX=69181 GN=DY000_00013553 PE=4 SV=1[more]
A0A7J8R7W91.9e-7484.70Uncharacterized protein OS=Gossypium davidsonii OX=34287 GN=Godav_010791 PE=4 SV... [more]
A0A6N2C3534.3e-7487.15Uncharacterized protein OS=Solanum chilense OX=4083 GN=EJD97_000200 PE=4 SV=1[more]
A0A151R6197.3e-7484.36Calmodulin OS=Cajanus cajan OX=3821 GN=KK1_040824 PE=4 SV=1[more]
BLAST of Lsi10G009450 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6771105.13.2e-7687.15hypothetical protein POTOM_022451 [Populus tomentosa][more]
KAF3652205.11.4e-7487.08Calmodulin [Capsicum annuum][more]
THG18163.12.3e-7487.22hypothetical protein TEA_018768 [Camellia sinensis var. sinensis][more]
KAF3554074.13.0e-7486.03hypothetical protein F2Q69_00014951, partial [Brassica cretica][more]
KAF3576228.13.0e-7486.03hypothetical protein DY000_02032454 [Brassica cretica][more]
BLAST of Lsi10G009450 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G41110.21.8e-7783.80calmodulin 2 [more]
AT3G43810.13.8e-7583.24calmodulin 7 [more]
AT2G41110.18.5e-7582.68calmodulin 2 [more]
AT2G27030.18.5e-7582.68calmodulin 5 [more]
AT2G27030.38.5e-7582.68calmodulin 5 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 115..143
e-value: 3.1E-8
score: 43.4
coord: 78..106
e-value: 2.5E-8
score: 43.7
coord: 12..40
e-value: 20.0
score: 7.3
coord: 151..179
e-value: 3.0E-9
score: 46.7
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 57..105
e-value: 2.1E-10
score: 40.2
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 113..176
e-value: 1.0E-18
score: 67.5
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 147..179
score: 15.182896
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 111..146
score: 17.554005
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 74..109
score: 14.5413
IPR002048EF-hand domainCDDcd00051EFhcoord: 115..177
e-value: 2.36017E-24
score: 88.3737
IPR002048EF-hand domainCDDcd00051EFhcoord: 12..104
e-value: 2.34562E-16
score: 67.5729
NoneNo IPR availableGENE3D1.10.238.10coord: 154..179
e-value: 3.2E-7
score: 32.2
NoneNo IPR availableGENE3D1.10.238.10coord: 105..153
e-value: 1.2E-26
score: 94.3
NoneNo IPR availableGENE3D1.10.238.10coord: 2..104
e-value: 6.5E-29
score: 101.9
NoneNo IPR availablePANTHERPTHR23050:SF403CALMODULIN-2coord: 2..179
NoneNo IPR availablePANTHERPTHR23050CALCIUM BINDING PROTEINcoord: 2..179
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 160..172
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 87..99
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 124..136
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 3..177

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G009450.1Lsi10G009450.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009846 pollen germination
biological_process GO:0030163 protein catabolic process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding