Lsi10G006960 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi10G006960
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionKxDL motif protein
Locationchr10: 9751417 .. 9755550 (+)
RNA-Seq ExpressionLsi10G006960
SyntenyLsi10G006960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCTCAGACTACCCTTCCCCATCTTCTCTCTCTCGCGCAGCCTCACACCCACGTGCGCCGCCGACAGCCCATGGCGTTTGATTAAGTTTCTTGGATCAATTTTGCTACCCACAACCTAACAACGCTCTATTTGTTAACCCATGGCGTTTTGGTCTTAGATTTTATGTTTTGGGAGATTAAGACCGTTTTCCAGCACTTACCCAATAATATCTAGCGGATTTTCAGTAAGTATCGAAGTATTGTTTTATTTGGATTAATATAGTTGCTGTAATTTGGATTTGTAACCCTTATTTTGGTGCTCAGCTTAGGTTCGAATTATTTATTTGAAGGTTGGAGGTGGTTTTGGATCAAAGAATGGTTTGGGCAAGTTATTTAGGGACTTTTAAGGTTAATTTACAATGTGGGTTAGGCACTAAATATTGGAAGTGATTCTGGCTTATCATTTAGGTGCGGATTGAGGCTTGAGTAAGCTTAAAGGAAGATTATTTGGATATTAATTGAGATTCAATTTTGAGGTAAGTGACACTGTTGTTGGAATGCCTAAGAGCCAGACAAAATTAATATGATATTATTATTGACAAAATTAATATCTACGATATGATTTGTGGTTTGGAGACATTGGTTTTGGTGTCAAAGAAGAAAAGTTTGGTTTCATTTTGGAACTTTAAACCTTGGTTGTGTTGGATGAAAGAAATTGCATGAAGGTTGAAATAAATTGCATTATGTGTTGGTTGTGAAACTCTGTGTTAGCATGTGAATCATTTTCCAAAATAAAGGGTCAGGCAGAGACGACCAGAATGTTGGAAGTGTGCTTCAATAAGCTTCTTCCTTAGCTTAGCAGAAGAGTTAGAGGAGATAATCTAAAGTGGACTTGTTAGTAGCAATAGTTGTTTAGGAACTATTGAAATGAAAGGTTGAGGCTTTATTAGTGAGAAAGTAAATCATTGAAAGTATTAGCAAAGTTTAAGAGATTTTGACTTTGGATGCAAGTTAGAACTAGAAATAGGTGAAGTCAACAATTTGATTGAAAAGAGGAAGTAATTAAGCGTGAAGTAAACCATGAGTTGTACTAGCGTTGAGTATAGTAAGTTAGATCCCCATGATTATCACTATCACAAGAGGTGATCTTGAGAATAGAGTTTGGGTCAAGAGAAACTCCAATTCCCAAGGTTCCTTATAAAGTGGCTTTAGCAGAGTTGGAGTACCCCAAGTCACAGTTACATAAACTATTTGACAGTTTTCATACGCTCTCATGTTTTGTCTTGGGACGCACAAGTTTTGTTTTTTACGAAGAAAGATGGATCTGTGCCACTATTTACCAACTATCAAGAGTTGAATATGGTAACGTAATCAGGTCATCGTGGAGAATGTCGGGGCTGTCAGGTGCTGAATTTTGATTCTGAATCCTAGTTCGAATATTGGGCTTGGGGTGTCAGAAATAGTATGTTATCTTGTATAGACTACAAGTTCATTAATTAAGAGGAGTAAAGATTTTCTCAAGATAGATTTACAAGCTAGGAAGGTGGATATCTCATAGACTGTTTGTAGGATCAAGTTCAATCATTATGAATTTTTGGGGATGTGTTTTGGACTCACCAATGCTACACAGCTTCCATGGACTTCAAGAACCGAGTTTTGAGAGCTCTCTAGACCCGTTTGTAACAATGTCTAATGAGCCATGTGAGTTTATTTCAAGGCTAAAAAGTAACATGAAAATTGTCTCATGTAATTTTTACATCCTTTGGCCGTAGTTAGCTTTATGTCGAGTTTTCTAGTGAGTATGAGACCTAACTGGACAAAATTGTTTCTTAGATGCATAGTGAGTCGGTGACTAAGGAGGGCACCGCAGTTGATGCTCCTAGAGTAGAAGCAATTTGCAGTTGGCCTAGACCCAGTGCAACAATTTAATTTATCAGCTTATTTGGCTGGCAAGTTAATGTAGAAAGTTGTTCAGGAATGTTTCCAGCTTGATAGCACCTTTGACTTGGTTGATGTTGTGTAGTTTGTGTGTGAAAAGCATGATATTGTGATGTATGTTGTTATGCTATATGGTAGCATGTCAAGTGTGAGTTACTTACCCGTACGTGTTGTGTAATAACCCACCAACAGTTTTGTAGGTGATTAAAGTTTCCATAAGCTTGTTGATGCGGAAGGCGAGGCATGACAAAAAAGGACCATATTAGCTAGTTTTATAGTACTTCAGCTAGTTGTATTTCTTAAAGTAATTGGGTTAAGTTGTGGATTGGTTGTTGTTCATTCGTTCTTTATTGTTTGTCTTTTAAGTTTGAATTAGAAATTTGTGTTGGAGTTGTCAAACTGTTTTAGAAGTTCAGTTCTTCTGAGAGGTATATTAAACTTGAATGTCCTTTCGTATGTGTTGGGACTTGATTGGTCATGTCAGGTGGCTTTTGTTTACTGATTTTTATTTCAAAAGTTTTAGATTGTTCATTTTTTGAGTAAAAAAGTAAAGGACTAGTTTCGTTGTTTTAGTTTTGCTGTTGTGCCTGCGTTTAAATAAGTTATAAAATTTGACAATGTTCCCTAATTTATGTGCTAATTTGGGGTTGTTATAAAGATGATGGAGCAGCGAGCGGAGGGGGAGTCGATAAGAGTAGCCTCAGAGGAGCTCTCTCAGGAATTCAAAACTTTGATGAATACTGATGATTTGAACTCTCTCAACCATTTGCAACACCTCATGTAAGTTCTGTTTCTCACTCTTCTGCTTATCAACATCGCTGTCAAACTGTTTGATATTTTTTTAATGAAAATTTGAAGAATATGTAAAATTTATTATTATTATTTTTTGATCGATTGTTCCATTGAATCACATTGCAGATTGGGGAGATTGCAGGATAGCAATGCAGTCCTCTCTCATTTCAACGAGTTTTCGGAGCATTGCTTTGCTGAAGTGTCTGGAGATCTATCTAGAAATACTCGTCTTTTAAACTCTATGAAATCTGACCTTGATTACATATTTCAGAAAATAAGGTATGGTGGTGATCAATTGTTTTTACTCACACATAAGTTCTTTTCATTATTGTTTATGATTTTAGGTGGTGGTTCTGTTCTACCATATCAAAAGTGTTGACTGTTGAAATATTATGGTATCTTTAATCTTTATCCCCCAACCAAAAGAAAAAAATAATACGATGAGACATGGATGATAATATGTTATTATCAAAGAGGATGAGATGAATAGACGTGTCTAATTTCAATTCATTCAACGTATTTCCTTTTCAGAGTATGGAGTTTTATGATCTCTACAGACTACTGATAAGTCTTTCTAAAAGTCCTTGGCCTTTAGCTCTAACAGTTACGAACTCCTTTACCTTATGGATCATCGATGCATTTAAATTTCCAGAAGATTTTCTTGGCACTGATTCTTTTTTATTGTGGAAGAACTACAATAATTTTGTTACCACTTTGTGCATGTTTGAGAGTGAATTTGAAATTGTTAAAATTACTTTTGTCATTTACAAAATCACTCCAAAATATATCTCTAATCACTCAAAATTAATTTAATATTTAATTTTTCACTTATAAATGCAATTTTTATATCACCAAAACTAGTTTTGAATGATTAAAAACATGTTTTCAGAGTGATTTTGAAAAAGTGATTTTAACAATTTTTTATGTTTTCAGAGTGATTCAAGCAACTGAAGAGAATTGGTATTTTCTACCATCTTGCAAGGATCTGACTTTGGTGTCCATAAATCCTTCTTGAAAGCAATTGCTTCTGATTGTGGTTACTTAAAGTTTCTTCTGTGTCTGATGTAATGCACTTGTATTTACTATTTAGTTGTAGTAGAAGGAATTATACGATCCTCTCTGCTCTTTCCTTGCATCTTATTTCACTGCAAGAAACTTCTGAAATGTTATCCTGTCCTAGAAGATCATGACTGATATTTTATTGATCTAATTTTTTTCATTTGTATATATTTTGTGCTTCTACTGGCAAATCCTATCAATTGATTAGATATGGCCATATCTTTCTAGTTTGTTAAGTTCATCCATTTCTCTTTTTTCATCAGGAGCATGAAATCAAGAATTTTGGCTACTTATCCTGATGCATTTCCAGATGAGTCAACAAGTGAAGTTCTTGATAGGAGACCAGACCTTGAAATACCTCGATAA

mRNA sequence

CGCTCAGACTACCCTTCCCCATCTTCTCTCTCTCGCGCAGCCTCACACCCACGTGCGCCGCCGACAGCCCATGGCGTTTGATTAAGTTTCTTGGATCAATTTTGCTACCCACAACCTAACAACGCTCTATTTGTTAACCCATGGCGTTTTGGTCTTAGATTTTATGTTTTGGGAGATTAAGACCGTTTTCCAGCACTTACCCAATAATATCTAGCGGATTTTCAATGATGGAGCAGCGAGCGGAGGGGGAGTCGATAAGAGTAGCCTCAGAGGAGCTCTCTCAGGAATTCAAAACTTTGATGAATACTGATGATTTGAACTCTCTCAACCATTTGCAACACCTCATATTGGGGAGATTGCAGGATAGCAATGCAGTCCTCTCTCATTTCAACGAGTTTTCGGAGCATTGCTTTGCTGAAGTGTCTGGAGATCTATCTAGAAATACTCGTCTTTTAAACTCTATGAAATCTGACCTTGATTACATATTTCAGAAAATAAGGAGCATGAAATCAAGAATTTTGGCTACTTATCCTGATGCATTTCCAGATGAGTCAACAAGTGAAGTTCTTGATAGGAGACCAGACCTTGAAATACCTCGATAA

Coding sequence (CDS)

ATGATGGAGCAGCGAGCGGAGGGGGAGTCGATAAGAGTAGCCTCAGAGGAGCTCTCTCAGGAATTCAAAACTTTGATGAATACTGATGATTTGAACTCTCTCAACCATTTGCAACACCTCATATTGGGGAGATTGCAGGATAGCAATGCAGTCCTCTCTCATTTCAACGAGTTTTCGGAGCATTGCTTTGCTGAAGTGTCTGGAGATCTATCTAGAAATACTCGTCTTTTAAACTCTATGAAATCTGACCTTGATTACATATTTCAGAAAATAAGGAGCATGAAATCAAGAATTTTGGCTACTTATCCTGATGCATTTCCAGATGAGTCAACAAGTGAAGTTCTTGATAGGAGACCAGACCTTGAAATACCTCGATAA

Protein sequence

MMEQRAEGESIRVASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEHCFAEVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEVLDRRPDLEIPR
Homology
[Close]
BLAST of Lsi10G006960 vs. ExPASy Swiss-Prot
Match: Q5M853 (KxDL motif-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Kxd1 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.9e-09
Identity = 38/109 (34.86%), Postives = 61/109 (55.96%), Query Frame = 0 

Query: 14  ASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEHCFAEVSGDLSRN 73
           AS      F +++NTDD+N++   Q  +L R + +N +L +FN  S     ++S     +
Sbjct: 7   ASRVFCGRFLSMVNTDDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSVRLQQMSERFMHH 66

Query: 74  TRLLNSMKSDLDYIFQKIRSMKSRILATYPDAF---PDESTSEVLDRRP 120
           TR L  MK DLD IF++IR++K ++   +P+AF   P+ S  E  D  P
Sbjct: 67  TRTLVDMKRDLDSIFRRIRTLKGKLARQHPEAFSHIPEGSLLEDEDEDP 115

[Close]
BLAST of Lsi10G006960 vs. ExPASy Swiss-Prot
Match: Q80XH1 (KxDL motif-containing protein 1 OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.5e-09
Identity = 38/109 (34.86%), Postives = 61/109 (55.96%), Query Frame = 0 

Query: 14  ASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEHCFAEVSGDLSRN 73
           AS      F +++NTDD+N++   Q  +L R + +N +L +FN  S     ++S     +
Sbjct: 7   ASRVFCGRFLSMVNTDDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSVRLQQMSERFMHH 66

Query: 74  TRLLNSMKSDLDYIFQKIRSMKSRILATYPDAF---PDESTSEVLDRRP 120
           TR L  MK DLD IF++IR++K ++   +P+AF   P+ S  E  D  P
Sbjct: 67  TRTLVDMKRDLDSIFRRIRTLKGKLARQHPEAFSHIPEGSFLEDEDEDP 115

[Close]
BLAST of Lsi10G006960 vs. ExPASy Swiss-Prot
Match: Q6DBR9 (KxDL motif-containing protein 1 OS=Danio rerio OX=7955 GN=kxd1 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.2e-09
Identity = 32/97 (32.99%), Postives = 58/97 (59.79%), Query Frame = 0 

Query: 24  TLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEHCFAEVSGDLSRNTRLLNSMKSD 83
           +++N++D+N++   Q  +L R + +N +L +FN  S     +++     +TR L  MK D
Sbjct: 15  SMVNSEDVNAIIQAQRHMLDRFEKTNEMLINFNGLSNVRLQQMNEHFLMHTRTLIEMKKD 74

Query: 84  LDYIFQKIRSMKSRILATYPDAFPDESTSEVLDRRPD 121
           LD IF++IR++K ++   YP+AF + S S  L+   D
Sbjct: 75  LDSIFRRIRALKGKVAKQYPEAFSNVSESSNLEDDDD 111

[Close]
BLAST of Lsi10G006960 vs. ExPASy Swiss-Prot
Match: Q6DDT0 (KxDL motif-containing protein 1 OS=Xenopus laevis OX=8355 GN=kxd1 PE=2 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 4.2e-09
Identity = 36/117 (30.77%), Postives = 62/117 (52.99%), Query Frame = 0 

Query: 6   AEGESIRVASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEHCFAE 65
           AE  +   AS         ++NT D+N++   Q  +L R + +N +L +FN  S     +
Sbjct: 2   AEQVTEATASGVFCSRILNMVNTGDVNAIILAQRHMLDRFEKTNEMLLNFNGLSNVRLQQ 61

Query: 66  VSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEVLDRRPDLE 123
           +S   + +TR L  MK DLD IF++IR +K ++   YP++F +   S +L+   D +
Sbjct: 62  MSDRFAHHTRTLVEMKKDLDIIFRRIRMLKGKLAKQYPESFNNVHESPILEDDDDFD 118

[Close]
BLAST of Lsi10G006960 vs. ExPASy Swiss-Prot
Match: Q0V9C8 (KxDL motif-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=kxd1 PE=2 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 4.2e-09
Identity = 35/117 (29.91%), Postives = 63/117 (53.85%), Query Frame = 0 

Query: 6   AEGESIRVASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEHCFAE 65
           AE  +   AS         ++N++D+N++   Q  +L R + +N +L +FN  S     +
Sbjct: 2   AEQVTEATASGVFCSRILNMVNSEDVNAIILAQRHMLDRFEKTNEMLLNFNGLSNTRLQQ 61

Query: 66  VSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEVLDRRPDLE 123
           +S   + +TR L  MK DLD IF++IR +K ++   YP++F +   S +L+   D +
Sbjct: 62  MSDRFAHHTRTLVEMKKDLDIIFRRIRMLKGKLAKQYPESFNNVHESPILEDDDDFD 118

[Close]
BLAST of Lsi10G006960 vs. ExPASy TrEMBL
Match: A0A0A0LK01 (KxDL domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G299930 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 7.1e-60
Identity = 122/124 (98.39%), Postives = 123/124 (99.19%), Query Frame = 0 

Query: 2   MEQRAEGESIRVASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 61
           MEQRAEGESIRVASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH
Sbjct: 1   MEQRAEGESIRVASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 60

Query: 62  CFAEVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEVLDRRPDL 121
           CFAEVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKS+ILATYPDAFPDESTSE LDRRPDL
Sbjct: 61  CFAEVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSKILATYPDAFPDESTSEALDRRPDL 120

Query: 122 EIPR 126
           EIPR
Sbjct: 121 EIPR 124

[Close]
BLAST of Lsi10G006960 vs. ExPASy TrEMBL
Match: A0A1S3CER9 (kxDL motif-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103499662 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.0e-59
Identity = 121/124 (97.58%), Postives = 121/124 (97.58%), Query Frame = 0 

Query: 2   MEQRAEGESIRVASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 61
           MEQRAEGESIRVASEELSQEFKTLMN DDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH
Sbjct: 1   MEQRAEGESIRVASEELSQEFKTLMNNDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 60

Query: 62  CFAEVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEVLDRRPDL 121
           CFA VSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSE LDRRPDL
Sbjct: 61  CFAAVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEALDRRPDL 120

Query: 122 EIPR 126
           EIPR
Sbjct: 121 EIPR 124

[Close]
BLAST of Lsi10G006960 vs. ExPASy TrEMBL
Match: A0A5A7TTR7 (KxDL motif-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00930 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.0e-59
Identity = 121/124 (97.58%), Postives = 121/124 (97.58%), Query Frame = 0 

Query: 2   MEQRAEGESIRVASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 61
           MEQRAEGESIRVASEELSQEFKTLMN DDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH
Sbjct: 1   MEQRAEGESIRVASEELSQEFKTLMNNDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 60

Query: 62  CFAEVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEVLDRRPDL 121
           CFA VSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSE LDRRPDL
Sbjct: 61  CFAAVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEALDRRPDL 120

Query: 122 EIPR 126
           EIPR
Sbjct: 121 EIPR 124

[Close]
BLAST of Lsi10G006960 vs. ExPASy TrEMBL
Match: A0A6J1K6F6 (kxDL motif-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111490503 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.8e-56
Identity = 117/124 (94.35%), Postives = 119/124 (95.97%), Query Frame = 0 

Query: 2   MEQRAEGESIRVASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 61
           MEQRAEGESIRVASEELSQEFKTL+ TDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH
Sbjct: 1   MEQRAEGESIRVASEELSQEFKTLIKTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 60

Query: 62  CFAEVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEVLDRRPDL 121
           CFAEVSGDLSRNTRLL SMKSDLDYIF KIRSMKSRILATYPDAFPDESTSE LDRRPDL
Sbjct: 61  CFAEVSGDLSRNTRLLKSMKSDLDYIFLKIRSMKSRILATYPDAFPDESTSEALDRRPDL 120

Query: 122 EIPR 126
           E P+
Sbjct: 121 ERPQ 124

[Close]
BLAST of Lsi10G006960 vs. ExPASy TrEMBL
Match: A0A6J1GS89 (kxDL motif-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111456987 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 8.2e-56
Identity = 116/124 (93.55%), Postives = 119/124 (95.97%), Query Frame = 0 

Query: 2   MEQRAEGESIRVASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 61
           MEQRAEGESIRVASEELS+EFKTL+ TDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH
Sbjct: 1   MEQRAEGESIRVASEELSREFKTLIKTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 60

Query: 62  CFAEVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEVLDRRPDL 121
           CFAEVSGDLSRNTRLL SMKSDLDYIF KIRSMKSRILATYPDAFPDESTSE LDRRPDL
Sbjct: 61  CFAEVSGDLSRNTRLLKSMKSDLDYIFLKIRSMKSRILATYPDAFPDESTSEALDRRPDL 120

Query: 122 EIPR 126
           E P+
Sbjct: 121 ERPQ 124

[Close]
BLAST of Lsi10G006960 vs. NCBI nr
Match: XP_004150678.1 (kxDL motif-containing protein 1 [Cucumis sativus])

HSP 1 Score: 239.6 bits (610), Expect = 1.5e-59
Identity = 122/124 (98.39%), Postives = 123/124 (99.19%), Query Frame = 0 

Query: 2   MEQRAEGESIRVASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 61
           MEQRAEGESIRVASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH
Sbjct: 1   MEQRAEGESIRVASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 60

Query: 62  CFAEVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEVLDRRPDL 121
           CFAEVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKS+ILATYPDAFPDESTSE LDRRPDL
Sbjct: 61  CFAEVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSKILATYPDAFPDESTSEALDRRPDL 120

Query: 122 EIPR 126
           EIPR
Sbjct: 121 EIPR 124

[Close]
BLAST of Lsi10G006960 vs. NCBI nr
Match: XP_038902517.1 (kxDL motif-containing protein 1 [Benincasa hispida] >XP_038902518.1 kxDL motif-containing protein 1 [Benincasa hispida])

HSP 1 Score: 237.7 bits (605), Expect = 5.6e-59
Identity = 120/124 (96.77%), Postives = 123/124 (99.19%), Query Frame = 0 

Query: 2   MEQRAEGESIRVASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 61
           MEQRAEGESIR+ASEELSQEFKTLMN DDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH
Sbjct: 1   MEQRAEGESIRIASEELSQEFKTLMNNDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 60

Query: 62  CFAEVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEVLDRRPDL 121
           C+AEVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEVLD+RPDL
Sbjct: 61  CYAEVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEVLDKRPDL 120

Query: 122 EIPR 126
           EIPR
Sbjct: 121 EIPR 124

[Close]
BLAST of Lsi10G006960 vs. NCBI nr
Match: XP_008460924.1 (PREDICTED: kxDL motif-containing protein 1 [Cucumis melo] >XP_008460925.1 PREDICTED: kxDL motif-containing protein 1 [Cucumis melo] >KAA0045516.1 kxDL motif-containing protein 1 [Cucumis melo var. makuwa] >TYK02105.1 kxDL motif-containing protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 236.5 bits (602), Expect = 1.2e-58
Identity = 121/124 (97.58%), Postives = 121/124 (97.58%), Query Frame = 0 

Query: 2   MEQRAEGESIRVASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 61
           MEQRAEGESIRVASEELSQEFKTLMN DDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH
Sbjct: 1   MEQRAEGESIRVASEELSQEFKTLMNNDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 60

Query: 62  CFAEVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEVLDRRPDL 121
           CFA VSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSE LDRRPDL
Sbjct: 61  CFAAVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEALDRRPDL 120

Query: 122 EIPR 126
           EIPR
Sbjct: 121 EIPR 124

[Close]
BLAST of Lsi10G006960 vs. NCBI nr
Match: XP_022994923.1 (kxDL motif-containing protein 1 [Cucurbita maxima])

HSP 1 Score: 227.6 bits (579), Expect = 5.8e-56
Identity = 117/124 (94.35%), Postives = 119/124 (95.97%), Query Frame = 0 

Query: 2   MEQRAEGESIRVASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 61
           MEQRAEGESIRVASEELSQEFKTL+ TDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH
Sbjct: 1   MEQRAEGESIRVASEELSQEFKTLIKTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 60

Query: 62  CFAEVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEVLDRRPDL 121
           CFAEVSGDLSRNTRLL SMKSDLDYIF KIRSMKSRILATYPDAFPDESTSE LDRRPDL
Sbjct: 61  CFAEVSGDLSRNTRLLKSMKSDLDYIFLKIRSMKSRILATYPDAFPDESTSEALDRRPDL 120

Query: 122 EIPR 126
           E P+
Sbjct: 121 ERPQ 124

[Close]
BLAST of Lsi10G006960 vs. NCBI nr
Match: XP_022954848.1 (kxDL motif-containing protein 1 [Cucurbita moschata] >KAG6573400.1 KxDL motif-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012563.1 KxDL motif-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226.1 bits (575), Expect = 1.7e-55
Identity = 116/124 (93.55%), Postives = 119/124 (95.97%), Query Frame = 0 

Query: 2   MEQRAEGESIRVASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 61
           MEQRAEGESIRVASEELS+EFKTL+ TDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH
Sbjct: 1   MEQRAEGESIRVASEELSREFKTLIKTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEH 60

Query: 62  CFAEVSGDLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEVLDRRPDL 121
           CFAEVSGDLSRNTRLL SMKSDLDYIF KIRSMKSRILATYPDAFPDESTSE LDRRPDL
Sbjct: 61  CFAEVSGDLSRNTRLLKSMKSDLDYIFLKIRSMKSRILATYPDAFPDESTSEALDRRPDL 120

Query: 122 EIPR 126
           E P+
Sbjct: 121 ERPQ 124

[Close]
BLAST of Lsi10G006960 vs. TAIR 10
Match: AT3G29130.1 (CONTAINS InterPro DOMAIN/s: Domain of unknown function KxDL (InterPro:IPR019371); Has 135 Blast hits to 135 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 178.7 bits (452), Expect = 2.9e-45
Identity = 85/117 (72.65%), Postives = 106/117 (90.60%), Query Frame = 0 

Query: 9   ESIRVASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEHCFAEVSG 68
           E+IR AS+E+S EFKTL+  +DLNSL HLQHLILGRLQDSNAVLSH+NEF+E+CF++VS 
Sbjct: 3   ETIRAASQEVSNEFKTLVKVEDLNSLRHLQHLILGRLQDSNAVLSHYNEFAENCFSDVSL 62

Query: 69  DLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEVLDRRPDLEIPR 126
           + +R+TRLL SMK+DLDYIF K+RS+KS+ILATYPDAFPD+STS+  DRRPDLE+P+
Sbjct: 63  EFARSTRLLKSMKADLDYIFLKLRSIKSKILATYPDAFPDDSTSDAFDRRPDLELPQ 119

[Close]
BLAST of Lsi10G006960 vs. TAIR 10
Match: AT3G29130.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Domain of unknown function KxDL (InterPro:IPR019371). )

HSP 1 Score: 178.7 bits (452), Expect = 2.9e-45
Identity = 85/117 (72.65%), Postives = 106/117 (90.60%), Query Frame = 0 

Query: 9   ESIRVASEELSQEFKTLMNTDDLNSLNHLQHLILGRLQDSNAVLSHFNEFSEHCFAEVSG 68
           E+IR AS+E+S EFKTL+  +DLNSL HLQHLILGRLQDSNAVLSH+NEF+E+CF++VS 
Sbjct: 52  ETIRAASQEVSNEFKTLVKVEDLNSLRHLQHLILGRLQDSNAVLSHYNEFAENCFSDVSL 111

Query: 69  DLSRNTRLLNSMKSDLDYIFQKIRSMKSRILATYPDAFPDESTSEVLDRRPDLEIPR 126
           + +R+TRLL SMK+DLDYIF K+RS+KS+ILATYPDAFPD+STS+  DRRPDLE+P+
Sbjct: 112 EFARSTRLLKSMKADLDYIFLKLRSIKSKILATYPDAFPDDSTSDAFDRRPDLELPQ 168

The following BLAST results are available for this feature:
BLAST of Lsi10G006960 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5M8531.9e-0934.86KxDL motif-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Kxd1 PE=1 SV=1[more]
Q80XH12.5e-0934.86KxDL motif-containing protein 1 OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1[more]
Q6DBR94.2e-0932.99KxDL motif-containing protein 1 OS=Danio rerio OX=7955 GN=kxd1 PE=2 SV=1[more]
Q6DDT04.2e-0930.77KxDL motif-containing protein 1 OS=Xenopus laevis OX=8355 GN=kxd1 PE=2 SV=2[more]
Q0V9C84.2e-0929.91KxDL motif-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=kxd1 PE=2 SV=2[more]
BLAST of Lsi10G006960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LK017.1e-6098.39KxDL domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G299930 PE=3 S... [more]
A0A1S3CER96.0e-5997.58kxDL motif-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103499662 PE=3 SV=... [more]
A0A5A7TTR76.0e-5997.58KxDL motif-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A6J1K6F62.8e-5694.35kxDL motif-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111490503 PE=3... [more]
A0A6J1GS898.2e-5693.55kxDL motif-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111456987 PE... [more]
BLAST of Lsi10G006960 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004150678.11.5e-5998.39kxDL motif-containing protein 1 [Cucumis sativus][more]
XP_038902517.15.6e-5996.77kxDL motif-containing protein 1 [Benincasa hispida] >XP_038902518.1 kxDL motif-c... [more]
XP_008460924.11.2e-5897.58PREDICTED: kxDL motif-containing protein 1 [Cucumis melo] >XP_008460925.1 PREDIC... [more]
XP_022994923.15.8e-5694.35kxDL motif-containing protein 1 [Cucurbita maxima][more]
XP_022954848.11.7e-5593.55kxDL motif-containing protein 1 [Cucurbita moschata] >KAG6573400.1 KxDL motif-co... [more]
BLAST of Lsi10G006960 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G29130.12.9e-4572.65CONTAINS InterPro DOMAIN/s: Domain of unknown function KxDL (InterPro:IPR019371)... [more]
AT3G29130.22.9e-4572.65FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019371Uncharacterised domain KxDLPFAMPF10241KxDLcoord: 22..106
e-value: 2.1E-24
score: 85.6
IPR039843KxDL motif-containing protein 1-likePANTHERPTHR13511UNCHARACTERIZEDcoord: 5..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G006960.1Lsi10G006960.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032418 lysosome localization
cellular_component GO:0099078 BORC complex