Lsi10G006000 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi10G006000
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionB3 domain-containing transcription factor VRN1-like
Locationchr10: 8622330 .. 8624838 (+)
RNA-Seq ExpressionLsi10G006000
SyntenyLsi10G006000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TACCTTCATATTCTTCTGTTCCCTTCACAAACAAACTTCAAGAAAAGAAAAACAAACTAAAGCTTCCAACCACAGCCATGGCTTCCTCAACGCCTCCCCACTTCTTCAAAGTCATTCTTTCTTACACACTCACTCAACAGAAGCTTGTAAGTCAAATATCTTCCACTTTAACTTCTTTAATTTATTTCATAAAACTGAGTTTAAACGAACCTTACTTCCCTCTTTTCATGGCCTTCAAGTTCTTGACCTCTTTGAACCCCTCCACATACATTAAGCAATATTTTTCCTAAATTTAAGCTTTGGTTTATCTTGTTCTATTTAAAACTTTTGGTTTTGTCAATTCTTGTTTTCTCATTGTTAATAATGTTTAACTTGTATTTAACTAACTTTTGAACTACTCTCATTCTGCCACGTGTTAGGGTTTTCTCTTTATTGACAGCTTTCTCCTTTTGTGCATTATGAAAATACAGCCCCATTTTTCTTTTTTATTCAAAGTTTCAGCCTTTAGTTTTTGTTTTGTTTGTAATGCCTTATATTCATACAACTCAAAATTCATTGTATTCTTAGTTTAATTTAAAACAAAAAAGAAAAAGAAAAAAGAAAAAAATTGAAAACTATTCTTTTACTTTTCAAAACTGGGACATGATGAGGATGCTAAAGATGTGTCAACTTAGTTGAGATATCTGGGTGCATCTACTAATCCCGCACTCCTCTTCTATTTGGTTAAAAAAAAAAAAAAAATAGCTTAGTTTTTGAAAACATAAGTGTAAATGGGATATTAAATTTCAATTTTTTTTTCTTTCTAATTCAGGAAGTTCCAACTAAATTTGTGAGATTATATGGAGAAGCTCTGAAATCTGAGGAGATTTGGCTTAAAGTAGTGAATGGAGTAAGGTGGAAAATAGGATTAGAAAAAAGTAACCAAAAAGTATGGTTAAAAAAAGGGTGGGCAGAGTTTGTAAGGTTTTATTCTATTAATATTGGTCATTTTATAGTATTCACATATGAAGGCAACTCTTGCTTTCATGTTCTTATATTTGATAAAACTGCTACTGGGATTGAATATCCAATTGCTTCTAGAGAATTTCATAACAAAAAAAGGTCTGAGGAAGGGGGAAATATTAAAGACTTTCAAATAATGTCTGTTAAAAGAGAGAAAGAATTTGAAGAAAATGGATGTGCCCAAATATTGGGCAACAACAAGAGATCAAGAAAGGAAGATAAAAGTAATAATGTTGCTCAAAATTTGCATTCACTGAATCCTAAGAACATGAAAAGAAGTGATCAAGCAGGTGGGAGTAAAGTCATTTGCAAAAAAGTGGAGCTGAAGAAGGAAGATTTACACTCTTCTGGATTGAAAATAGGTACAATGCATACTTATTTTTTATTCTATTTTCATGAAATTATAATAACCCTAGCTCTTAAACTATAATGGTATTAGATAAACATAAGATTTTTATCTCGAAACAAATTGATAATGAAAAAAAATAGTCCATGTATCGTATAAAAATTGTGAGGTATCCCTCCACACACATATATATTTGTATCTTAGTCTTTATTGTTAGCTTTTCATTGATTATTTATGTATGCAAGTCTAGGAAGCAATTTTTCTTTTAAACTGACAAACTTTTTGAATGCCAGATTGGAAACCCTTCCAAGAGAGAAATAAAGTGAAGAAGCCAACAATTGCAACCCAAGAAGCAAGAATAAATAATGAAAAAGCTTCAAAATTCAAATCACTAACCAAAAATCCTTCTTTTATGGTTACAATAGGTTCTTCATACCTACATACAGGTAGAGGTTATGTGGTAAGTTATCTATCATATATTTTTAGGTTTAAATACTACTTCGGTCCCTGTACTTTTGGCTTTGGTTCATTTTGGTCCCTGTACTTTTAAAATGTTCGTCTTGATCCCTATACTTTTAACTTTGGTTCATTTTGGTTCTTGAACTTTTAAAAAGTGACAATTTTGGTACCTTAGAAATGAAGTAAAAATGAAAATGGAGAGACCAAAATGGTCACTTTTTTAAAAGTACAAGGACCAAAAAATGAACATTATGAAAGTATAGGAACCAAAATGAACCAAAGTTGATAGTATATGGACCAAAATGAACAAAAAAAAAACAAAAGTACGGGGACCAAAGTAGTATTTAAACCTACATTTCTACTTGCCCTTAAAAATTCAATAAAAAAAATTGTTAAAATCACTCTAAAACATACCTTTAATTAAACTAGTTTGCTCGAATCATTATGCAGTGTATTCCAATAGGTTTTGGAAATACTCACTTGAGGAAGAACAAAAAATTGACTCTGCAAGTTTCAGATGGAAATTGTTGGAAGGTTAAGTGTGTTGAACGTTGGTATTCCAATATACAAAGATTTGAAATGGGTAATGGTTGGAGGAAATTTGCAAGAGATAATAATTTGAAAGAAGGTGATATTTGTGTTTTTGAATTGATGAAAAACATTCAAATATCCTTTAAAACTACCATTTTCCGATTGGATTTG

mRNA sequence

TACCTTCATATTCTTCTGTTCCCTTCACAAACAAACTTCAAGAAAAGAAAAACAAACTAAAGCTTCCAACCACAGCCATGGCTTCCTCAACGCCTCCCCACTTCTTCAAAGTCATTCTTTCTTACACACTCACTCAACAGAAGCTTGAAGTTCCAACTAAATTTGTGAGATTATATGGAGAAGCTCTGAAATCTGAGGAGATTTGGCTTAAAGTAGTGAATGGAGTAAGGTGGAAAATAGGATTAGAAAAAAGTAACCAAAAAGTATGGTTAAAAAAAGGGTGGGCAGAGTTTGTAAGGTTTTATTCTATTAATATTGGTCATTTTATAGTATTCACATATGAAGGCAACTCTTGCTTTCATGTTCTTATATTTGATAAAACTGCTACTGGGATTGAATATCCAATTGCTTCTAGAGAATTTCATAACAAAAAAAGGTCTGAGGAAGGGGGAAATATTAAAGACTTTCAAATAATGTCTGTTAAAAGAGAGAAAGAATTTGAAGAAAATGGATGTGCCCAAATATTGGGCAACAACAAGAGATCAAGAAAGGAAGATAAAAGTAATAATGTTGCTCAAAATTTGCATTCACTGAATCCTAAGAACATGAAAAGAAGTGATCAAGCAGGTGGGAGTAAAGTCATTTGCAAAAAAGTGGAGCTGAAGAAGGAAGATTTACACTCTTCTGGATTGAAAATAGATTGGAAACCCTTCCAAGAGAGAAATAAAGTGAAGAAGCCAACAATTGCAACCCAAGAAGCAAGAATAAATAATGAAAAAGCTTCAAAATTCAAATCACTAACCAAAAATCCTTCTTTTATGTGTATTCCAATAGGTTTTGGAAATACTCACTTGAGGAAGAACAAAAAATTGACTCTGCAAGTTTCAGATGGAAATTGTTGGAAGGTTAAGTGTGTTGAACGTTGGTATTCCAATATACAAAGATTTGAAATGGGTAATGGTTGGAGGAAATTTGCAAGAGATAATAATTTGAAAGAAGGTGATATTTGTGTTTTTGAATTGATGAAAAACATTCAAATATCCTTTAAAACTACCATTTTCCGATTGGATTTG

Coding sequence (CDS)

ATGGCTTCCTCAACGCCTCCCCACTTCTTCAAAGTCATTCTTTCTTACACACTCACTCAACAGAAGCTTGAAGTTCCAACTAAATTTGTGAGATTATATGGAGAAGCTCTGAAATCTGAGGAGATTTGGCTTAAAGTAGTGAATGGAGTAAGGTGGAAAATAGGATTAGAAAAAAGTAACCAAAAAGTATGGTTAAAAAAAGGGTGGGCAGAGTTTGTAAGGTTTTATTCTATTAATATTGGTCATTTTATAGTATTCACATATGAAGGCAACTCTTGCTTTCATGTTCTTATATTTGATAAAACTGCTACTGGGATTGAATATCCAATTGCTTCTAGAGAATTTCATAACAAAAAAAGGTCTGAGGAAGGGGGAAATATTAAAGACTTTCAAATAATGTCTGTTAAAAGAGAGAAAGAATTTGAAGAAAATGGATGTGCCCAAATATTGGGCAACAACAAGAGATCAAGAAAGGAAGATAAAAGTAATAATGTTGCTCAAAATTTGCATTCACTGAATCCTAAGAACATGAAAAGAAGTGATCAAGCAGGTGGGAGTAAAGTCATTTGCAAAAAAGTGGAGCTGAAGAAGGAAGATTTACACTCTTCTGGATTGAAAATAGATTGGAAACCCTTCCAAGAGAGAAATAAAGTGAAGAAGCCAACAATTGCAACCCAAGAAGCAAGAATAAATAATGAAAAAGCTTCAAAATTCAAATCACTAACCAAAAATCCTTCTTTTATGTGTATTCCAATAGGTTTTGGAAATACTCACTTGAGGAAGAACAAAAAATTGACTCTGCAAGTTTCAGATGGAAATTGTTGGAAGGTTAAGTGTGTTGAACGTTGGTATTCCAATATACAAAGATTTGAAATGGGTAATGGTTGGAGGAAATTTGCAAGAGATAATAATTTGAAAGAAGGTGATATTTGTGTTTTTGAATTGATGAAAAACATTCAAATATCCTTTAAAACTACCATTTTCCGATTGGATTTG

Protein sequence

MASSTPPHFFKVILSYTLTQQKLEVPTKFVRLYGEALKSEEIWLKVVNGVRWKIGLEKSNQKVWLKKGWAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATGIEYPIASREFHNKKRSEEGGNIKDFQIMSVKREKEFEENGCAQILGNNKRSRKEDKSNNVAQNLHSLNPKNMKRSDQAGGSKVICKKVELKKEDLHSSGLKIDWKPFQERNKVKKPTIATQEARINNEKASKFKSLTKNPSFMCIPIGFGNTHLRKNKKLTLQVSDGNCWKVKCVERWYSNIQRFEMGNGWRKFARDNNLKEGDICVFELMKNIQISFKTTIFRLDL
Homology
BLAST of Lsi10G006000 vs. ExPASy Swiss-Prot
Match: Q8L3W1 (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.7e-26
Identity = 103/355 (29.01%), Postives = 168/355 (47.32%), Query Frame = 0

Query: 7   PHFFKVILSYTLTQQKLEVPTKFVRLYGEALKSEEIWLKVVNGVRWKIGLEKSNQKVWLK 66
           P F K+I S T+ +++L VP KFV  + + L S  + L V +G  W++GL K++ K+W +
Sbjct: 4   PFFHKLIFSSTIQEKRLRVPDKFVSKFKDEL-SVAVALTVPDGHVWRVGLRKADNKIWFQ 63

Query: 67  KGWAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATGIEYPIASREFHNKKRSEEGGN 126
            GW EFV  YSI IG+ ++F YEGNS F V IF+ + + I Y       H+    +   N
Sbjct: 64  DGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINY-------HSTGLMDSAHN 123

Query: 127 IKDFQIMSVKREKEFE--ENGCAQILGNNKRSRKEDKSNNVAQN-------LHSLNPKNM 186
                    KR + FE  E+  A+++  +         + V  N       + +L    +
Sbjct: 124 -------HFKRARLFEDLEDEDAEVIFPSSVYPSPLPESTVPANKGYASSAIQTLFTGPV 183

Query: 187 KRSDQAGGSKVICKKVELKK----EDLHSSGLKID----WKPFQERNKVKKPTIATQE-- 246
           K  +     K+  K+   KK    E+++SS  + D       F E    +K T+  +E  
Sbjct: 184 KAEEPTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAEERE 243

Query: 247 ----ARINNEKASKFKSLTKNPSF------MCIPIGFGNTHLRK-NKKLTLQVSDGNCWK 306
               A    E  + F  +   PS+      M +P GF   +L   +  + +Q+++   W 
Sbjct: 244 RAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQ-WP 303

Query: 307 VKCVERWYSNIQRFEMGNGWRKFARDNNLKEGDICVFELMKNIQISFKTTIFRLD 332
           V+C+ +      R +   GW +F  +NNL EGD+CVFEL++      K T FR++
Sbjct: 304 VRCLYK----AGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFRVN 338

BLAST of Lsi10G006000 vs. ExPASy Swiss-Prot
Match: Q9XIB4 (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49475 PE=2 SV=2)

HSP 1 Score: 88.2 bits (217), Expect = 1.9e-16
Identity = 48/149 (32.21%), Postives = 85/149 (57.05%), Query Frame = 0

Query: 5   TPPHFFKVILSYTLTQQKLEVPTKFVRLYGEALKSEEIWLKVVNGVRWKIGLEKSNQKVW 64
           T   F K+IL   + ++ ++VP +FVR +G  L ++ + L+   G +  I +++   +VW
Sbjct: 30  TVKKFIKIILLSRIIEKMMKVPARFVR-FGPKL-TDNVTLQTPVGFKRSIRIKRIGDEVW 89

Query: 65  LKKGWAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATGIEYPIASRE---------- 124
            +KGW+EF   +S++ GHF+ F YEG+SCF V+IFD +A+ IEYP+   +          
Sbjct: 90  FEKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNREEVMDDD 149

Query: 125 ---FHNKKRSEEGGNIKDFQIMSVKREKE 141
              F   + S++ G + D   +  K++K+
Sbjct: 150 EQGFTGFESSDDDGEVVDMDELLKKKKKK 176

BLAST of Lsi10G006000 vs. ExPASy Swiss-Prot
Match: Q9ZSH7 (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01580 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.3e-14
Identity = 47/154 (30.52%), Postives = 80/154 (51.95%), Query Frame = 0

Query: 9   FFKVILSYTLTQQKLEVPTKFVRLYGEALKSEEIWLKVVNGVRWKIGLEKSNQKVWLKKG 68
           FFK++L  T+  + + +P +FV+L G  L SE + L    G +  I L++  +++W  +G
Sbjct: 30  FFKLVLPSTMKDKMMRIPPRFVKLQGSKL-SEVVTLVTPAGYKRSIKLKRIGEEIWFHEG 89

Query: 69  WAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATGIEYP---------------IASR 128
           W+EF   +SI  GHF++F Y+ NS F V+IF+ +A    YP               I  +
Sbjct: 90  WSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPLDAVHIIDSDDDVIEITGK 149

Query: 129 EFHNKKRSEEGGN-------IKDFQIMSVKREKE 141
           EF  + +S++          + D  +M V +E+E
Sbjct: 150 EFDTEHKSKKRPRDIEFDKILHDVDVMQVLKEEE 182

BLAST of Lsi10G006000 vs. ExPASy Swiss-Prot
Match: Q84R27 (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18960 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 8.9e-14
Identity = 50/174 (28.74%), Postives = 94/174 (54.02%), Query Frame = 0

Query: 9   FFKVILSYTLTQQKLEVPTKFVRLYGEALKSEEIWLKVVNGVRWKIGLEKSNQKVWLKKG 68
           FFK++L  T+  + +++P +FV+L G  L SE + L+   G +  I L++  +++W  +G
Sbjct: 30  FFKLVLPSTMKDKMMKIPPRFVKLQGSKL-SEVVTLETPAGFKRSIKLKRIGEEIWFHEG 89

Query: 69  WAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATGIEYPIASREFHNKKRSEEGGNIK 128
           W+EF   +SI  GHF++F Y+ NS F V+IF+ +A   +YP+ +    +          K
Sbjct: 90  WSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPLDAVHIIDSDDDIIDITGK 149

Query: 129 DFQIMSVKREKEFEENGCAQILGNNKRSRKEDKSNNVAQNLHSLNPKNMKRSDQ 183
           +F      R+     NG      + KRSR + + + +  +L  +NP ++ + ++
Sbjct: 150 EFVGTQGTRKNNQSVNGGDTEHKSKKRSR-DIELDKILHDLDVMNPMHVLKEEE 201

BLAST of Lsi10G006000 vs. ExPASy Swiss-Prot
Match: Q2R9D2 (B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0197600 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.6e-13
Identity = 106/381 (27.82%), Postives = 161/381 (42.26%), Query Frame = 0

Query: 9   FFKVILSYTLTQQKLEVPTKFVRLYGEALKSEE---IWLKVVNGVRWKIGLEKSNQKVWL 68
           FF+V+L+   + +++++P+ F     + L+++    + L   +G +W   L   ++  + 
Sbjct: 32  FFRVLLTLQ-SLERMKIPSSF----NQCLQNQPTGMVSLVDRSGNKWSAELTSDSEGFFF 91

Query: 69  KKGWAEFVRFYSINIGHFIVFTYEGNSCFHVLIF-----DKTATGIEYPIASREFHNKKR 128
             GW EFVR  SI  G F+VFTY+  S F V +F     DK +T   +P  S+    K  
Sbjct: 92  VHGWKEFVRDNSIQCGQFLVFTYDKRSQFSVTVFEPSGIDKISTFSAHP--SKNVIIKTE 151

Query: 129 SEEGGNIKDFQIMSVKREKEFEENGCAQILGNNKRSRKED----------KSNNVAQNLH 188
           S+EGG +    I + K     +EN         KR+R  D          K ++ A    
Sbjct: 152 SDEGGMV-TAAITTEKMAPALKENNGI----TGKRTRDVDYLMEDRVVVFKKSSEANVCE 211

Query: 189 SLNPKNMKRSDQAGGSKVICKKVELKK-----EDLHSSGLKIDWKPFQER---------- 248
           S   K    S  AG SKV        +      D  +S  K    PF  R          
Sbjct: 212 SSRRKRAGAS--AGKSKVTSTSHNSTRGSSCSSDEDNSSSKSPNPPFLMRFLSGEVSRRG 271

Query: 249 ----NKVKKPTIATQEARINN-------EKASKFKSLTKNP--------------SFMCI 308
                  ++ T+ +Q   +         ++A +FKS  KNP               FM I
Sbjct: 272 RCVSKGQRQLTVISQRRPVTEAEKDHALQRAREFKS--KNPFAVQIMMESYVYVGFFMNI 331

Query: 309 PIGFGNTHL-RKNKKLTLQVSDGNCWKVKCVERWYSNIQRFEMGNGWRKFARDNNLKEGD 331
           P  F    L   NK++TL    G  W+V  V  +YS+        GW KFA  NNL++ D
Sbjct: 332 PCEFVRECLPHTNKRITLWDPQGKAWEVNYV--YYSDRSVGSFSGGWGKFAVGNNLEKFD 391

BLAST of Lsi10G006000 vs. ExPASy TrEMBL
Match: A0A1S4E1R2 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=LOC107991566 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.0e-57
Identity = 146/311 (46.95%), Postives = 182/311 (58.52%), Query Frame = 0

Query: 46  VVNGVRWKIGLEKSNQKVWLKKGWAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATG 105
           +V+G +WK+GL+KSN+KVW +KGW EFV+F+SI+ GHF+ F YEGNSCF V+IFD+TAT 
Sbjct: 1   MVSGAKWKVGLKKSNEKVWFEKGWEEFVKFHSIDYGHFLTFRYEGNSCFQVVIFDQTATE 60

Query: 106 IEYPIA-SREFHNKKRSEEGGNIKDFQIMSVKREKEFEENGCAQILGNNKRSRKEDKSNN 165
           IEYPI+   +F NKK  EE        +   +  KE  E+ C                  
Sbjct: 61  IEYPISFKNQFDNKKMFEEKRKSVQETLPIKRARKEVHEDEC------------------ 120

Query: 166 VAQNLHSLNPKNMKRSDQAGGSKVI-----CKKVELKK--EDLHSSGLKIDWKPFQERNK 225
           V Q L+    K MK SD+ G +KVI      ++VE+KK  EDL SS L            
Sbjct: 121 VPQTLY----KKMKTSDEVGANKVIWRSHELQEVEMKKNTEDLKSSDL------------ 180

Query: 226 VKKPTIATQEARINNEKASKFKSLTKNPSFMC-------------IPIGFGNTHLRKNKK 285
            KK  I ++ +     KASKFK +T NPSFM              IP GF +T+L++ K 
Sbjct: 181 -KKGKIWSKRSSTIFAKASKFKEITTNPSFMVTMGRSYLHTSNLNIPTGFASTYLKETKD 240

Query: 286 LTLQVS--DGNCWKVKCVERWY--SNIQRFEMGNGWRKFARDNNLKEGDICVFELMKNIQ 330
           L L VS  D   WK+ CVERW    + QRFEM  GWR+FARDN+LKEGDICVFELMKNIQ
Sbjct: 241 LILYVSSDDQKVWKILCVERWLYARSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQ 276

BLAST of Lsi10G006000 vs. ExPASy TrEMBL
Match: A0A6J1E0D8 (B3 domain-containing protein At4g01580-like OS=Momordica charantia OX=3673 GN=LOC111024773 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.0e-57
Identity = 143/343 (41.69%), Postives = 193/343 (56.27%), Query Frame = 0

Query: 3   SSTPPHFFKVILSYTLTQQKLEVPTKFVRLYGEALKSEEIWLKVVNGVRWKIGLEKSNQK 62
           +S  PHFFKVIL + LTQ+KL VP KFV  +GEAL++EE++LKV NG  WK+G+EKSN K
Sbjct: 14  TSATPHFFKVILPHILTQRKLNVPKKFVSRHGEALQNEEVFLKVANGAEWKVGVEKSNGK 73

Query: 63  VWLKKGWAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATGIEYPIASREFHNKKRSE 122
           VW +KGW +FV FYSI +G+F+ F YE N+CFHV IFD +A+ IEYP+           E
Sbjct: 74  VWFEKGWQQFVEFYSIGVGYFLTFRYETNACFHVTIFDPSASEIEYPM-----------E 133

Query: 123 EGGNIKDFQIMSVKREKEFEENGCAQILGNNKRSRKEDKSNNVAQNLHSLNPKNMKRSDQ 182
           + G+I+          +EFE+    QIL   +R   +    N+    H    K     D+
Sbjct: 134 DFGDIR-------SESEEFED----QILVYKRRREGKITQTNLYSVAHHKKMKISNDHDE 193

Query: 183 AGGSKVICKKVELKKEDLHSSGLKIDWKPFQERNKVKKPTIATQEARINNEKASKFKSLT 242
                       L+ ED  SS        F++R KV K        R   E+AS F+S+T
Sbjct: 194 V-----------LRNEDFQSS-------KFKDRLKVIK---CENGLRSVTERASTFQSMT 253

Query: 243 KNPSFMC---------------IPIGFGNTHLRKNKKLTLQVSDGNCWKVKCVERWYSNI 302
            N SFM                IP  F   H++K+++++L+ SDG  WK+ C  R   N+
Sbjct: 254 PNHSFMITMGPSYIHTGKGDPNIPKSFAKIHVKKSQEISLEDSDGRVWKIWCGVRPSQNV 313

Query: 303 QR-FEMGNGWRKFARDNNLKEGDICVFELMKNIQISFKTTIFR 330
            +  EM  GW+ FARDN+L+EG ICVFELMK  ++SFK TIFR
Sbjct: 314 NKSVEMRGGWKAFARDNSLEEGHICVFELMKGTKLSFKVTIFR 313

BLAST of Lsi10G006000 vs. ExPASy TrEMBL
Match: A0A6J1I6H9 (B3 domain-containing transcription factor VRN1-like OS=Cucurbita maxima OX=3661 GN=LOC111470377 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 3.9e-57
Identity = 135/341 (39.59%), Postives = 170/341 (49.85%), Query Frame = 0

Query: 4   STPPHFFKVILSYTLTQQKLEVPTKFVRLYGEALKSEEIWLKVVNGVRWKIGLEKSNQKV 63
           S  PHFFKVIL  TL Q KL +P KFVR +GEAL++EE+ LKV +G  WK+GL K+++K+
Sbjct: 7   SATPHFFKVILPQTLIQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEKI 66

Query: 64  WLKKGWAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATGIEYPIASREFHNKKRSEE 123
           W +KGW EFV+FYS+ IGHF+ F YEGNSCFHV+IFDKTA+ IEYP+             
Sbjct: 67  WFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPL------------- 126

Query: 124 GGNIKDFQIMSVKREKEFEENGCAQILGNNKRSRKEDKSNNVAQNLHSLNPKNMKRSDQA 183
                                GC                                     
Sbjct: 127 ---------------------GC------------------------------------- 186

Query: 184 GGSKVICKKVELKKEDLHSSGLKIDWKPFQERNKVKKPTIATQEARINNEKASKFKSLTK 243
           GG                               KVKK     +E     E+A+KF+SLT 
Sbjct: 187 GG-------------------------------KVKK-----RERFSITEEATKFQSLTM 240

Query: 244 NPSFM---------------CIPIGFGNTHLRKNKKLTLQVSDGNCWKVKCVERWYSNIQ 303
           NPSFM                IP+ F N H+   K++ ++VSDG  WK+ C ERW   ++
Sbjct: 247 NPSFMVTMGASYLHTGKSYLSIPLWFANAHMESPKEMNVEVSDGRVWKILCGERWPLGVK 240

Query: 304 RFEMGNGWRKFARDNNLKEGDICVFELMKNIQISFKTTIFR 330
           R EM  GWR FARDN LK+GDICVFELM+  ++SFK TIFR
Sbjct: 307 RVEMRGGWRDFARDNGLKKGDICVFELMETSELSFKATIFR 240

BLAST of Lsi10G006000 vs. ExPASy TrEMBL
Match: A0A6J1EJA7 (B3 domain-containing transcription factor VRN1-like OS=Cucurbita moschata OX=3662 GN=LOC111434979 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 5.2e-57
Identity = 135/341 (39.59%), Postives = 171/341 (50.15%), Query Frame = 0

Query: 4   STPPHFFKVILSYTLTQQKLEVPTKFVRLYGEALKSEEIWLKVVNGVRWKIGLEKSNQKV 63
           S  PHFFKVIL  TL Q KL +P KFVR +GEAL++EE+ LKV +G  WK+GL K+++K+
Sbjct: 7   SATPHFFKVILPQTLNQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEKI 66

Query: 64  WLKKGWAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATGIEYPIASREFHNKKRSEE 123
           W +KGW EFV+FYS+ IGHF+ F YEGNSCFHV+IFDKTA+ IEYP+             
Sbjct: 67  WFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPL------------- 126

Query: 124 GGNIKDFQIMSVKREKEFEENGCAQILGNNKRSRKEDKSNNVAQNLHSLNPKNMKRSDQA 183
                                GC                                     
Sbjct: 127 ---------------------GC------------------------------------- 186

Query: 184 GGSKVICKKVELKKEDLHSSGLKIDWKPFQERNKVKKPTIATQEARINNEKASKFKSLTK 243
           GG                               KVKK     +E    +E+A+KF+SLT 
Sbjct: 187 GG-------------------------------KVKK-----RERFSISEEATKFQSLTT 240

Query: 244 NPSFM---------------CIPIGFGNTHLRKNKKLTLQVSDGNCWKVKCVERWYSNIQ 303
           NPSFM                IP  F N H+   K+++++VSDG  WK+ C ERW   ++
Sbjct: 247 NPSFMVTMGASYLHTGKSYLSIPQWFANAHMESPKEMSVEVSDGRVWKILCGERWPHGVK 240

Query: 304 RFEMGNGWRKFARDNNLKEGDICVFELMKNIQISFKTTIFR 330
           R EM  GWR FARDN LK+GDICVFELM+  ++SFK TIFR
Sbjct: 307 RVEMRGGWRDFARDNGLKKGDICVFELMETSELSFKATIFR 240

BLAST of Lsi10G006000 vs. ExPASy TrEMBL
Match: A0A5A7TS22 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002630 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.7e-47
Identity = 128/355 (36.06%), Postives = 189/355 (53.24%), Query Frame = 0

Query: 3   SSTPPHFFKVILSYTLTQQKLEVPTKFVRLYGEALKSEEIWLKVVNGVRWKIGLEKSNQK 62
           SS  PHFFKVIL  TLTQQKLE+P KFV+  G ++   ++ L + +G  WKI L+KS+ K
Sbjct: 6   SSPNPHFFKVILHQTLTQQKLELPNKFVKNNGGSMLFNKVTLFLPDGANWKIQLKKSDGK 65

Query: 63  VWLKKGWAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATGIEYPIAS-REFHNKKRS 122
           ++ ++GW EFV+FYS+  G+F+VF  +G  CF+VLIFD +AT I+YPI    +   K R+
Sbjct: 66  IFFRRGWPEFVQFYSVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPIRGLLDIIPKSRN 125

Query: 123 ---EEGGNIKDFQIMSVKREKEFEENGCAQILGNNKRSRKEDKSNNVAQNL--------H 182
              EE   I +  ++  +R ++ EE    + L   K+  +++    +A+N          
Sbjct: 126 EDEEESIQILNEMVLKKRRMEKEEETPAYRSLRGLKKMMRKNAKVKIAKNRGITSDEDEE 185

Query: 183 SLNPKNMKRSDQAGGSKVICKKVELKKEDLHSSGLKIDWKPFQERNKVKKPTIATQEARI 242
            L   N +R     G+                   ++  +  +  N  K P   T+    
Sbjct: 186 DLETDNSRRQSNHRGTAY-----------NEGDDGRVSPESMRPMNPRKTPPALTENQLA 245

Query: 243 NNEKASKFKSLTKNPSFM--------------CIPIGFGNTHLRKNKKLTLQVSDGNCWK 302
             ++AS+FKS   NPSFM               +P  FG  +++++  + L+V DG  W+
Sbjct: 246 VKKRASRFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGERYIKESVDVKLEVGDGRSWR 305

Query: 303 VKCVERWYSNIQRFEMGNGWRKFARDNNLKEGDICVFELM-KNIQISFKTTIFRL 331
           V C  RW    +R E+  GW++FA DN LKEGDICVFELM KN  + FK  IFRL
Sbjct: 306 VWCGVRWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMEKNDAVLFKVAIFRL 349

BLAST of Lsi10G006000 vs. NCBI nr
Match: XP_016902166.1 (PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo])

HSP 1 Score: 233.8 bits (595), Expect = 2.1e-57
Identity = 146/311 (46.95%), Postives = 182/311 (58.52%), Query Frame = 0

Query: 46  VVNGVRWKIGLEKSNQKVWLKKGWAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATG 105
           +V+G +WK+GL+KSN+KVW +KGW EFV+F+SI+ GHF+ F YEGNSCF V+IFD+TAT 
Sbjct: 1   MVSGAKWKVGLKKSNEKVWFEKGWEEFVKFHSIDYGHFLTFRYEGNSCFQVVIFDQTATE 60

Query: 106 IEYPIA-SREFHNKKRSEEGGNIKDFQIMSVKREKEFEENGCAQILGNNKRSRKEDKSNN 165
           IEYPI+   +F NKK  EE        +   +  KE  E+ C                  
Sbjct: 61  IEYPISFKNQFDNKKMFEEKRKSVQETLPIKRARKEVHEDEC------------------ 120

Query: 166 VAQNLHSLNPKNMKRSDQAGGSKVI-----CKKVELKK--EDLHSSGLKIDWKPFQERNK 225
           V Q L+    K MK SD+ G +KVI      ++VE+KK  EDL SS L            
Sbjct: 121 VPQTLY----KKMKTSDEVGANKVIWRSHELQEVEMKKNTEDLKSSDL------------ 180

Query: 226 VKKPTIATQEARINNEKASKFKSLTKNPSFMC-------------IPIGFGNTHLRKNKK 285
            KK  I ++ +     KASKFK +T NPSFM              IP GF +T+L++ K 
Sbjct: 181 -KKGKIWSKRSSTIFAKASKFKEITTNPSFMVTMGRSYLHTSNLNIPTGFASTYLKETKD 240

Query: 286 LTLQVS--DGNCWKVKCVERWY--SNIQRFEMGNGWRKFARDNNLKEGDICVFELMKNIQ 330
           L L VS  D   WK+ CVERW    + QRFEM  GWR+FARDN+LKEGDICVFELMKNIQ
Sbjct: 241 LILYVSSDDQKVWKILCVERWLYARSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQ 276

BLAST of Lsi10G006000 vs. NCBI nr
Match: XP_023513190.1 (B3 domain-containing transcription factor VRN1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233.4 bits (594), Expect = 2.8e-57
Identity = 136/341 (39.88%), Postives = 172/341 (50.44%), Query Frame = 0

Query: 4   STPPHFFKVILSYTLTQQKLEVPTKFVRLYGEALKSEEIWLKVVNGVRWKIGLEKSNQKV 63
           S  PHFFKVIL  TLTQ KL +P KFVR +GEAL++EE+ LKV +G  WK+GL K+++K+
Sbjct: 7   SATPHFFKVILPQTLTQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEKI 66

Query: 64  WLKKGWAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATGIEYPIASREFHNKKRSEE 123
           W +KGW EFV+FYS+ IGHF+ F YEGNSCFHV+IFDKTA+ IEYP+             
Sbjct: 67  WFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPL------------- 126

Query: 124 GGNIKDFQIMSVKREKEFEENGCAQILGNNKRSRKEDKSNNVAQNLHSLNPKNMKRSDQA 183
                                GC                                     
Sbjct: 127 ---------------------GC------------------------------------- 186

Query: 184 GGSKVICKKVELKKEDLHSSGLKIDWKPFQERNKVKKPTIATQEARINNEKASKFKSLTK 243
           GG                               KVKK     +E    +E+A+KF+SLT 
Sbjct: 187 GG-------------------------------KVKK-----RERFSISEEATKFQSLTM 240

Query: 244 NPSFM---------------CIPIGFGNTHLRKNKKLTLQVSDGNCWKVKCVERWYSNIQ 303
           NPSFM                IP  F N H+   K+++++VSDG  WK+ C ERW   ++
Sbjct: 247 NPSFMVTMGASYLHTGKSYLSIPQWFANAHMESPKEMSVEVSDGRVWKILCGERWPHGVK 240

Query: 304 RFEMGNGWRKFARDNNLKEGDICVFELMKNIQISFKTTIFR 330
           R EM  GWR FARDN LK+GDICVFELM+  ++SFK TIFR
Sbjct: 307 RVEMRGGWRDFARDNGLKKGDICVFELMETSELSFKATIFR 240

BLAST of Lsi10G006000 vs. NCBI nr
Match: XP_022158241.1 (B3 domain-containing protein At4g01580-like [Momordica charantia])

HSP 1 Score: 232.3 bits (591), Expect = 6.2e-57
Identity = 143/343 (41.69%), Postives = 193/343 (56.27%), Query Frame = 0

Query: 3   SSTPPHFFKVILSYTLTQQKLEVPTKFVRLYGEALKSEEIWLKVVNGVRWKIGLEKSNQK 62
           +S  PHFFKVIL + LTQ+KL VP KFV  +GEAL++EE++LKV NG  WK+G+EKSN K
Sbjct: 14  TSATPHFFKVILPHILTQRKLNVPKKFVSRHGEALQNEEVFLKVANGAEWKVGVEKSNGK 73

Query: 63  VWLKKGWAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATGIEYPIASREFHNKKRSE 122
           VW +KGW +FV FYSI +G+F+ F YE N+CFHV IFD +A+ IEYP+           E
Sbjct: 74  VWFEKGWQQFVEFYSIGVGYFLTFRYETNACFHVTIFDPSASEIEYPM-----------E 133

Query: 123 EGGNIKDFQIMSVKREKEFEENGCAQILGNNKRSRKEDKSNNVAQNLHSLNPKNMKRSDQ 182
           + G+I+          +EFE+    QIL   +R   +    N+    H    K     D+
Sbjct: 134 DFGDIR-------SESEEFED----QILVYKRRREGKITQTNLYSVAHHKKMKISNDHDE 193

Query: 183 AGGSKVICKKVELKKEDLHSSGLKIDWKPFQERNKVKKPTIATQEARINNEKASKFKSLT 242
                       L+ ED  SS        F++R KV K        R   E+AS F+S+T
Sbjct: 194 V-----------LRNEDFQSS-------KFKDRLKVIK---CENGLRSVTERASTFQSMT 253

Query: 243 KNPSFMC---------------IPIGFGNTHLRKNKKLTLQVSDGNCWKVKCVERWYSNI 302
            N SFM                IP  F   H++K+++++L+ SDG  WK+ C  R   N+
Sbjct: 254 PNHSFMITMGPSYIHTGKGDPNIPKSFAKIHVKKSQEISLEDSDGRVWKIWCGVRPSQNV 313

Query: 303 QR-FEMGNGWRKFARDNNLKEGDICVFELMKNIQISFKTTIFR 330
            +  EM  GW+ FARDN+L+EG ICVFELMK  ++SFK TIFR
Sbjct: 314 NKSVEMRGGWKAFARDNSLEEGHICVFELMKGTKLSFKVTIFR 313

BLAST of Lsi10G006000 vs. NCBI nr
Match: XP_022971710.1 (B3 domain-containing transcription factor VRN1-like [Cucurbita maxima])

HSP 1 Score: 231.9 bits (590), Expect = 8.1e-57
Identity = 135/341 (39.59%), Postives = 170/341 (49.85%), Query Frame = 0

Query: 4   STPPHFFKVILSYTLTQQKLEVPTKFVRLYGEALKSEEIWLKVVNGVRWKIGLEKSNQKV 63
           S  PHFFKVIL  TL Q KL +P KFVR +GEAL++EE+ LKV +G  WK+GL K+++K+
Sbjct: 7   SATPHFFKVILPQTLIQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEKI 66

Query: 64  WLKKGWAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATGIEYPIASREFHNKKRSEE 123
           W +KGW EFV+FYS+ IGHF+ F YEGNSCFHV+IFDKTA+ IEYP+             
Sbjct: 67  WFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPL------------- 126

Query: 124 GGNIKDFQIMSVKREKEFEENGCAQILGNNKRSRKEDKSNNVAQNLHSLNPKNMKRSDQA 183
                                GC                                     
Sbjct: 127 ---------------------GC------------------------------------- 186

Query: 184 GGSKVICKKVELKKEDLHSSGLKIDWKPFQERNKVKKPTIATQEARINNEKASKFKSLTK 243
           GG                               KVKK     +E     E+A+KF+SLT 
Sbjct: 187 GG-------------------------------KVKK-----RERFSITEEATKFQSLTM 240

Query: 244 NPSFM---------------CIPIGFGNTHLRKNKKLTLQVSDGNCWKVKCVERWYSNIQ 303
           NPSFM                IP+ F N H+   K++ ++VSDG  WK+ C ERW   ++
Sbjct: 247 NPSFMVTMGASYLHTGKSYLSIPLWFANAHMESPKEMNVEVSDGRVWKILCGERWPLGVK 240

Query: 304 RFEMGNGWRKFARDNNLKEGDICVFELMKNIQISFKTTIFR 330
           R EM  GWR FARDN LK+GDICVFELM+  ++SFK TIFR
Sbjct: 307 RVEMRGGWRDFARDNGLKKGDICVFELMETSELSFKATIFR 240

BLAST of Lsi10G006000 vs. NCBI nr
Match: XP_022928091.1 (B3 domain-containing transcription factor VRN1-like [Cucurbita moschata])

HSP 1 Score: 231.5 bits (589), Expect = 1.1e-56
Identity = 135/341 (39.59%), Postives = 171/341 (50.15%), Query Frame = 0

Query: 4   STPPHFFKVILSYTLTQQKLEVPTKFVRLYGEALKSEEIWLKVVNGVRWKIGLEKSNQKV 63
           S  PHFFKVIL  TL Q KL +P KFVR +GEAL++EE+ LKV +G  WK+GL K+++K+
Sbjct: 7   SATPHFFKVILPQTLNQSKLAIPHKFVRKHGEALETEEVRLKVASGAEWKVGLTKNDEKI 66

Query: 64  WLKKGWAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATGIEYPIASREFHNKKRSEE 123
           W +KGW EFV+FYS+ IGHF+ F YEGNSCFHV+IFDKTA+ IEYP+             
Sbjct: 67  WFEKGWEEFVKFYSVEIGHFLTFRYEGNSCFHVVIFDKTASEIEYPL------------- 126

Query: 124 GGNIKDFQIMSVKREKEFEENGCAQILGNNKRSRKEDKSNNVAQNLHSLNPKNMKRSDQA 183
                                GC                                     
Sbjct: 127 ---------------------GC------------------------------------- 186

Query: 184 GGSKVICKKVELKKEDLHSSGLKIDWKPFQERNKVKKPTIATQEARINNEKASKFKSLTK 243
           GG                               KVKK     +E    +E+A+KF+SLT 
Sbjct: 187 GG-------------------------------KVKK-----RERFSISEEATKFQSLTT 240

Query: 244 NPSFM---------------CIPIGFGNTHLRKNKKLTLQVSDGNCWKVKCVERWYSNIQ 303
           NPSFM                IP  F N H+   K+++++VSDG  WK+ C ERW   ++
Sbjct: 247 NPSFMVTMGASYLHTGKSYLSIPQWFANAHMESPKEMSVEVSDGRVWKILCGERWPHGVK 240

Query: 304 RFEMGNGWRKFARDNNLKEGDICVFELMKNIQISFKTTIFR 330
           R EM  GWR FARDN LK+GDICVFELM+  ++SFK TIFR
Sbjct: 307 RVEMRGGWRDFARDNGLKKGDICVFELMETSELSFKATIFR 240

BLAST of Lsi10G006000 vs. TAIR 10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 119.4 bits (298), Expect = 5.5e-27
Identity = 103/355 (29.01%), Postives = 168/355 (47.32%), Query Frame = 0

Query: 7   PHFFKVILSYTLTQQKLEVPTKFVRLYGEALKSEEIWLKVVNGVRWKIGLEKSNQKVWLK 66
           P F K+I S T+ +++L VP KFV  + + L S  + L V +G  W++GL K++ K+W +
Sbjct: 4   PFFHKLIFSSTIQEKRLRVPDKFVSKFKDEL-SVAVALTVPDGHVWRVGLRKADNKIWFQ 63

Query: 67  KGWAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATGIEYPIASREFHNKKRSEEGGN 126
            GW EFV  YSI IG+ ++F YEGNS F V IF+ + + I Y       H+    +   N
Sbjct: 64  DGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINY-------HSTGLMDSAHN 123

Query: 127 IKDFQIMSVKREKEFE--ENGCAQILGNNKRSRKEDKSNNVAQN-------LHSLNPKNM 186
                    KR + FE  E+  A+++  +         + V  N       + +L    +
Sbjct: 124 -------HFKRARLFEDLEDEDAEVIFPSSVYPSPLPESTVPANKGYASSAIQTLFTGPV 183

Query: 187 KRSDQAGGSKVICKKVELKK----EDLHSSGLKID----WKPFQERNKVKKPTIATQE-- 246
           K  +     K+  K+   KK    E+++SS  + D       F E    +K T+  +E  
Sbjct: 184 KAEEPTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAEERE 243

Query: 247 ----ARINNEKASKFKSLTKNPSF------MCIPIGFGNTHLRK-NKKLTLQVSDGNCWK 306
               A    E  + F  +   PS+      M +P GF   +L   +  + +Q+++   W 
Sbjct: 244 RAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQ-WP 303

Query: 307 VKCVERWYSNIQRFEMGNGWRKFARDNNLKEGDICVFELMKNIQISFKTTIFRLD 332
           V+C+ +      R +   GW +F  +NNL EGD+CVFEL++      K T FR++
Sbjct: 304 VRCLYK----AGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFRVN 338

BLAST of Lsi10G006000 vs. TAIR 10
Match: AT1G49475.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-17
Identity = 48/149 (32.21%), Postives = 85/149 (57.05%), Query Frame = 0

Query: 5   TPPHFFKVILSYTLTQQKLEVPTKFVRLYGEALKSEEIWLKVVNGVRWKIGLEKSNQKVW 64
           T   F K+IL   + ++ ++VP +FVR +G  L ++ + L+   G +  I +++   +VW
Sbjct: 30  TVKKFIKIILLSRIIEKMMKVPARFVR-FGPKL-TDNVTLQTPVGFKRSIRIKRIGDEVW 89

Query: 65  LKKGWAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATGIEYPIASRE---------- 124
            +KGW+EF   +S++ GHF+ F YEG+SCF V+IFD +A+ IEYP+   +          
Sbjct: 90  FEKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNREEVMDDD 149

Query: 125 ---FHNKKRSEEGGNIKDFQIMSVKREKE 141
              F   + S++ G + D   +  K++K+
Sbjct: 150 EQGFTGFESSDDDGEVVDMDELLKKKKKK 176

BLAST of Lsi10G006000 vs. TAIR 10
Match: AT4G01580.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.7e-15
Identity = 47/154 (30.52%), Postives = 80/154 (51.95%), Query Frame = 0

Query: 9   FFKVILSYTLTQQKLEVPTKFVRLYGEALKSEEIWLKVVNGVRWKIGLEKSNQKVWLKKG 68
           FFK++L  T+  + + +P +FV+L G  L SE + L    G +  I L++  +++W  +G
Sbjct: 30  FFKLVLPSTMKDKMMRIPPRFVKLQGSKL-SEVVTLVTPAGYKRSIKLKRIGEEIWFHEG 89

Query: 69  WAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATGIEYP---------------IASR 128
           W+EF   +SI  GHF++F Y+ NS F V+IF+ +A    YP               I  +
Sbjct: 90  WSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPLDAVHIIDSDDDVIEITGK 149

Query: 129 EFHNKKRSEEGGN-------IKDFQIMSVKREKE 141
           EF  + +S++          + D  +M V +E+E
Sbjct: 150 EFDTEHKSKKRPRDIEFDKILHDVDVMQVLKEEE 182

BLAST of Lsi10G006000 vs. TAIR 10
Match: AT3G18960.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 79.3 bits (194), Expect = 6.3e-15
Identity = 50/174 (28.74%), Postives = 94/174 (54.02%), Query Frame = 0

Query: 9   FFKVILSYTLTQQKLEVPTKFVRLYGEALKSEEIWLKVVNGVRWKIGLEKSNQKVWLKKG 68
           FFK++L  T+  + +++P +FV+L G  L SE + L+   G +  I L++  +++W  +G
Sbjct: 30  FFKLVLPSTMKDKMMKIPPRFVKLQGSKL-SEVVTLETPAGFKRSIKLKRIGEEIWFHEG 89

Query: 69  WAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATGIEYPIASREFHNKKRSEEGGNIK 128
           W+EF   +SI  GHF++F Y+ NS F V+IF+ +A   +YP+ +    +          K
Sbjct: 90  WSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPLDAVHIIDSDDDIIDITGK 149

Query: 129 DFQIMSVKREKEFEENGCAQILGNNKRSRKEDKSNNVAQNLHSLNPKNMKRSDQ 183
           +F      R+     NG      + KRSR + + + +  +L  +NP ++ + ++
Sbjct: 150 EFVGTQGTRKNNQSVNGGDTEHKSKKRSR-DIELDKILHDLDVMNPMHVLKEEE 201

BLAST of Lsi10G006000 vs. TAIR 10
Match: AT3G17010.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 71.2 bits (173), Expect = 1.7e-12
Identity = 75/321 (23.36%), Postives = 136/321 (42.37%), Query Frame = 0

Query: 9   FFKVILSYTLTQQKLE-VPTKFVRLYGEALKSEEIWLKVVNGVRWKIGLEKSNQKVWLK- 68
           FFK+     L+   +  +P  F+    E   S ++ ++   G  W + + K+    +++ 
Sbjct: 21  FFKIFQRADLSSDCMRALPYSFISKVSEKDFSYKMVIRAQWGKTWDVEVSKNPTYYYIET 80

Query: 69  KGWAEFVRFYSINIGHFIVFTYEGNSCFHVLIFDKTATGIEYPIASREFHNKKRSEEGGN 128
           +GW  FV   ++    FI FT+ GN  FHV I+++                         
Sbjct: 81  RGWDLFVSDNALGQNEFITFTHRGNMVFHVNIYEQNG----------------------- 140

Query: 129 IKDFQIMSVKREKEFEENGCAQILGNNKRSRKEDKSNNVAQNLHSLNPKNMKRSDQAGGS 188
                 + +++ ++F      Q +G +   +KE+  N++      ++ K  + SD++ G 
Sbjct: 141 ------LEMRKPRKF------QTMGPSSGIKKEEGENSL------IDVKKEEESDESPGR 200

Query: 189 KVICKKVELKKEDLHSSGLKIDWKPFQERNKVKKPTIATQEARINNEKASKFKSLTKNPS 248
                + + K ED  SS  K+       RNKVKK + +  +  ++     K         
Sbjct: 201 AEFLVR-KKKTEDSKSSKKKM------TRNKVKKKSKSKSKQVLDGVPEFKITIRKSYLK 260

Query: 249 FMCIPIGFGNTHL-RKNKKLTLQVSDGNCWKVKCVERWYSNIQRFEMGNGWRKFARDNNL 308
           F+ IP  F + H+  K+K  T++  +G  WKV C+ R    I       G+ K AR+  L
Sbjct: 261 FLAIPKHFVDDHIPNKSKIFTIRHPNGGSWKVLCLVREIRTI----FSGGYSKLAREFPL 289

Query: 309 KEGDICVFELMKNIQISFKTT 327
             GD C F+L+K  +    T+
Sbjct: 321 MVGDKCTFKLIKPFEFVLLTS 289

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8L3W17.7e-2629.01B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G... [more]
Q9XIB41.9e-1632.21B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49... [more]
Q9ZSH72.3e-1430.52B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01... [more]
Q84R278.9e-1428.74B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18... [more]
Q2R9D22.6e-1327.82B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica OX=399... [more]
Match NameE-valueIdentityDescription
A0A1S4E1R21.0e-5746.95B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=L... [more]
A0A6J1E0D83.0e-5741.69B3 domain-containing protein At4g01580-like OS=Momordica charantia OX=3673 GN=LO... [more]
A0A6J1I6H93.9e-5739.59B3 domain-containing transcription factor VRN1-like OS=Cucurbita maxima OX=3661 ... [more]
A0A6J1EJA75.2e-5739.59B3 domain-containing transcription factor VRN1-like OS=Cucurbita moschata OX=366... [more]
A0A5A7TS221.7e-4736.06B3 domain-containing transcription factor VRN1-like OS=Cucumis melo var. makuwa ... [more]
Match NameE-valueIdentityDescription
XP_016902166.12.1e-5746.95PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo][more]
XP_023513190.12.8e-5739.88B3 domain-containing transcription factor VRN1-like [Cucurbita pepo subsp. pepo][more]
XP_022158241.16.2e-5741.69B3 domain-containing protein At4g01580-like [Momordica charantia][more]
XP_022971710.18.1e-5739.59B3 domain-containing transcription factor VRN1-like [Cucurbita maxima][more]
XP_022928091.11.1e-5639.59B3 domain-containing transcription factor VRN1-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT3G18990.15.5e-2729.01AP2/B3-like transcriptional factor family protein [more]
AT1G49475.11.4e-1732.21AP2/B3-like transcriptional factor family protein [more]
AT4G01580.11.7e-1530.52AP2/B3-like transcriptional factor family protein [more]
AT3G18960.16.3e-1528.74AP2/B3-like transcriptional factor family protein [more]
AT3G17010.11.7e-1223.36AP2/B3-like transcriptional factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainSMARTSM01019B3_2coord: 9..102
e-value: 1.8E-15
score: 67.4
coord: 238..331
e-value: 1.0E-8
score: 44.9
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 246..329
e-value: 1.3E-15
score: 57.1
coord: 9..101
e-value: 1.7E-14
score: 53.5
IPR003340B3 DNA binding domainPROSITEPS50863B3coord: 233..331
score: 12.167423
IPR003340B3 DNA binding domainPROSITEPS50863B3coord: 8..102
score: 13.337848
IPR003340B3 DNA binding domainCDDcd10017B3_DNAcoord: 238..329
e-value: 4.64221E-16
score: 70.8197
IPR003340B3 DNA binding domainCDDcd10017B3_DNAcoord: 7..100
e-value: 1.09961E-20
score: 83.5312
IPR015300DNA-binding pseudobarrel domain superfamilyGENE3D2.40.330.10coord: 220..331
e-value: 1.9E-21
score: 78.0
IPR015300DNA-binding pseudobarrel domain superfamilyGENE3D2.40.330.10coord: 1..103
e-value: 1.5E-25
score: 91.0
IPR015300DNA-binding pseudobarrel domain superfamilySUPERFAMILY101936DNA-binding pseudobarrel domaincoord: 3..102
IPR015300DNA-binding pseudobarrel domain superfamilySUPERFAMILY101936DNA-binding pseudobarrel domaincoord: 240..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..184
NoneNo IPR availablePANTHERPTHR31920B3 DOMAIN-CONTAININGcoord: 3..329
NoneNo IPR availablePANTHERPTHR31920:SF51B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR VRN1-LIKEcoord: 3..329

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G006000.1Lsi10G006000.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding