Lsi10G005680 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi10G005680
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionB3 domain-containing protein
Locationchr10: 8295062 .. 8295956 (-)
RNA-Seq ExpressionLsi10G005680
SyntenyLsi10G005680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATACTGATATACTTTATACTATATATTTTTGTCCCTTCCTTTCCCCATGTTGATTTGTAGTCTCTGATGGCATGCTTAGACATGTACAACTCCGACCACAAGTCCCTCCACCGCCGTGCTCCGGCCACCAGCCCTCGAATCTCCTTCTCCAGCGACTTCGTCGACATCCAACAGTCCCTCAAACACCAAGAACAACGCTCCACAGCTGCCCCACCCCCCGTCTCGTCCTCTTCCGATTTCGAATTCTCCGTCTCCAACTACTCTATGATGCCGGCCGACGAGCTCTTCTTCGAGGGCCGCCTTCTCCCTTATAAGGACTCCAACAGGGCGACTACTACTCTTAGAGACGAGCTTCTCGTCGAGGAAGAGGAAGGAGACGACAACGACGACGACAATGACGTTTTGCACCGCCCTACGTCTAGGGGTCGTTGGAAGGGCTTTCTTGGCTTGAAAAAGTCCCACAATAATGCTTCCAAGAAAGGGTGTAGAAATGACGGCTCTAGCGGCAGCCGTGACGTCGGCAGTGGCAAAAGGTCATTCGGTTGGTCGTCCTCTTCACCTAGTACTAGGGCAAACTCCTCCCACCAGGTAAAAAAAACAACCAACGAAAAATTATTCAACGTGACTGTCACTCCTTTTTAACTTTTGTTTGTTGTTAAATTATTGAAAGGGTACTTTTGGAATTTGTATTTTTTTCAGGTACAAAATGAAGGAGAATCAAGTTGCAAAGACGTGGAGATTGATTTCTAGAGAAAGGGAGAAGTTTAGTTAAAGTTTAAAAGGGAATGTAGAGCTTCTTGTTCAATCGGGTTTCAATTTATTTTTTTTTAATTTTTAAATTAACCATTTAGATTTTTGTGTTGTATGATCAATGCTAATGTTTTTCAGATTTGTA

mRNA sequence

ATACTGATATACTTTATACTATATATTTTTGTCCCTTCCTTTCCCCATGTTGATTTGTAGTCTCTGATGGCATGCTTAGACATGTACAACTCCGACCACAAGTCCCTCCACCGCCGTGCTCCGGCCACCAGCCCTCGAATCTCCTTCTCCAGCGACTTCGTCGACATCCAACAGTCCCTCAAACACCAAGAACAACGCTCCACAGCTGCCCCACCCCCCGTCTCGTCCTCTTCCGATTTCGAATTCTCCGTCTCCAACTACTCTATGATGCCGGCCGACGAGCTCTTCTTCGAGGGCCGCCTTCTCCCTTATAAGGACTCCAACAGGGCGACTACTACTCTTAGAGACGAGCTTCTCGTCGAGGAAGAGGAAGGAGACGACAACGACGACGACAATGACGTTTTGCACCGCCCTACGTCTAGGGGTCGTTGGAAGGGCTTTCTTGGCTTGAAAAAGTCCCACAATAATGCTTCCAAGAAAGGGTGTAGAAATGACGGCTCTAGCGGCAGCCGTGACGTCGGCAGTGGCAAAAGGTCATTCGGTTGGTCGTCCTCTTCACCTAGTACTAGGGCAAACTCCTCCCACCAGGTACAAAATGAAGGAGAATCAAGTTGCAAAGACGTGGAGATTGATTTCTAGAGAAAGGGAGAAGTTTAGTTAAAGTTTAAAAGGGAATGTAGAGCTTCTTGTTCAATCGGGTTTCAATTTATTTTTTTTTAATTTTTAAATTAACCATTTAGATTTTTGTGTTGTATGATCAATGCTAATGTTTTTCAGATTTGTA

Coding sequence (CDS)

ATGGCATGCTTAGACATGTACAACTCCGACCACAAGTCCCTCCACCGCCGTGCTCCGGCCACCAGCCCTCGAATCTCCTTCTCCAGCGACTTCGTCGACATCCAACAGTCCCTCAAACACCAAGAACAACGCTCCACAGCTGCCCCACCCCCCGTCTCGTCCTCTTCCGATTTCGAATTCTCCGTCTCCAACTACTCTATGATGCCGGCCGACGAGCTCTTCTTCGAGGGCCGCCTTCTCCCTTATAAGGACTCCAACAGGGCGACTACTACTCTTAGAGACGAGCTTCTCGTCGAGGAAGAGGAAGGAGACGACAACGACGACGACAATGACGTTTTGCACCGCCCTACGTCTAGGGGTCGTTGGAAGGGCTTTCTTGGCTTGAAAAAGTCCCACAATAATGCTTCCAAGAAAGGGTGTAGAAATGACGGCTCTAGCGGCAGCCGTGACGTCGGCAGTGGCAAAAGGTCATTCGGTTGGTCGTCCTCTTCACCTAGTACTAGGGCAAACTCCTCCCACCAGGTACAAAATGAAGGAGAATCAAGTTGCAAAGACGTGGAGATTGATTTCTAG

Protein sequence

MACLDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLKHQEQRSTAAPPPVSSSSDFEFSVSNYSMMPADELFFEGRLLPYKDSNRATTTLRDELLVEEEEGDDNDDDNDVLHRPTSRGRWKGFLGLKKSHNNASKKGCRNDGSSGSRDVGSGKRSFGWSSSSPSTRANSSHQVQNEGESSCKDVEIDF
Homology
BLAST of Lsi10G005680 vs. ExPASy TrEMBL
Match: A0A0A0LJI9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285940 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 7.0e-83
Identity = 169/191 (88.48%), Postives = 175/191 (91.62%), Query Frame = 0

Query: 1   MACLDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLKHQEQRSTAAPPPVSSSSDFEF 60
           MACLDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLK+QEQRS A  PPVSSSSDFEF
Sbjct: 1   MACLDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLKYQEQRSAA--PPVSSSSDFEF 60

Query: 61  SVSNYSMMPADELFFEGRLLPYKDSNRATTTLRDELLVEEEEGDDNDDDNDVLHRPTSRG 120
           SVSNY+MM ADELFFEGRLLPYKDSNR  TTLR+ELLVEEEEG+D +DDND   RPTSRG
Sbjct: 61  SVSNYNMMTADELFFEGRLLPYKDSNRTATTLREELLVEEEEGED-EDDNDASQRPTSRG 120

Query: 121 RWKGFLGLKKSHNNASKKGCRNDGSSGSRDVGSGKRSFGWSSSSPSTRANSSHQVQNEGE 180
           RWKGFLGLKKSHNNASKKGCRNDGSS SRDV SGKR FGWSSSS STRANSSHQVQNEG 
Sbjct: 121 RWKGFLGLKKSHNNASKKGCRNDGSSSSRDVSSGKRPFGWSSSSSSTRANSSHQVQNEGS 180

Query: 181 -SSCKDVEIDF 191
            +SCKDVEIDF
Sbjct: 181 GTSCKDVEIDF 188

BLAST of Lsi10G005680 vs. ExPASy TrEMBL
Match: A0A5A7TUK7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00280 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.5e-82
Identity = 169/192 (88.02%), Postives = 174/192 (90.62%), Query Frame = 0

Query: 1   MACLDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLKHQEQRSTAAPPPVSSSSDFEF 60
           MACLDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLK+QEQRS A  PPVSSSSDFEF
Sbjct: 1   MACLDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLKYQEQRSAA--PPVSSSSDFEF 60

Query: 61  SVSNYSMMPADELFFEGRLLPYKDSNRATTTLRDELLVEEEEGDDNDDDNDVLHRPTSR- 120
           SVSNY+MM ADELFFEGRLLPYKDSNR  TTLR+ELLVEEEEGDD DD++D   RPTSR 
Sbjct: 61  SVSNYNMMTADELFFEGRLLPYKDSNRTVTTLREELLVEEEEGDDEDDNDDASQRPTSRP 120

Query: 121 GRWKGFLGLKKSH-NNASKKGCRNDGSSGSRDVGSGKRSFGWSSSSPSTRANSSHQVQNE 180
           GRWKGFLGLKKSH NNASKKGCRNDGSSGSRDV  GKR FGWSSSS STRANSS QVQNE
Sbjct: 121 GRWKGFLGLKKSHNNNASKKGCRNDGSSGSRDVSGGKRPFGWSSSSSSTRANSSQQVQNE 180

Query: 181 GESSCKDVEIDF 191
           G SSCKDVEIDF
Sbjct: 181 GGSSCKDVEIDF 190

BLAST of Lsi10G005680 vs. ExPASy TrEMBL
Match: A0A1S3C600 (uncharacterized protein LOC103497420 OS=Cucumis melo OX=3656 GN=LOC103497420 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.5e-82
Identity = 169/192 (88.02%), Postives = 174/192 (90.62%), Query Frame = 0

Query: 1   MACLDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLKHQEQRSTAAPPPVSSSSDFEF 60
           MACLDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLK+QEQRS A  PPVSSSSDFEF
Sbjct: 1   MACLDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLKYQEQRSAA--PPVSSSSDFEF 60

Query: 61  SVSNYSMMPADELFFEGRLLPYKDSNRATTTLRDELLVEEEEGDDNDDDNDVLHRPTSR- 120
           SVSNY+MM ADELFFEGRLLPYKDSNR  TTLR+ELLVEEEEGDD DD++D   RPTSR 
Sbjct: 61  SVSNYNMMTADELFFEGRLLPYKDSNRTVTTLREELLVEEEEGDDEDDNDDASQRPTSRP 120

Query: 121 GRWKGFLGLKKSH-NNASKKGCRNDGSSGSRDVGSGKRSFGWSSSSPSTRANSSHQVQNE 180
           GRWKGFLGLKKSH NNASKKGCRNDGSSGSRDV  GKR FGWSSSS STRANSS QVQNE
Sbjct: 121 GRWKGFLGLKKSHNNNASKKGCRNDGSSGSRDVSGGKRPFGWSSSSSSTRANSSQQVQNE 180

Query: 181 GESSCKDVEIDF 191
           G SSCKDVEIDF
Sbjct: 181 GGSSCKDVEIDF 190

BLAST of Lsi10G005680 vs. ExPASy TrEMBL
Match: A0A6J1KZD6 (uncharacterized protein LOC111499636 OS=Cucurbita maxima OX=3661 GN=LOC111499636 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.8e-60
Identity = 146/183 (79.78%), Postives = 155/183 (84.70%), Query Frame = 0

Query: 1   MACLDMYNSD-HKSLHRRAPATSPRISFSSDFVDIQQSLKHQEQRSTAAPPPVSSSSDFE 60
           MACLDMYNSD HKSLHRRAPA SPRISFSSDFVDIQQSLKHQE RS AAP PVSSSSDFE
Sbjct: 1   MACLDMYNSDHHKSLHRRAPA-SPRISFSSDFVDIQQSLKHQE-RSAAAPAPVSSSSDFE 60

Query: 61  FSVSNYSMMPADELFFEGRLLPYKDSNRATTTLRDELLVEEEEGDDNDDDNDVLHRPTSR 120
           FSVSNYSMM ADELFFEGRLLP+KDS+R  TTLR+ELLVEEEE  D     DV ++  SR
Sbjct: 61  FSVSNYSMMSADELFFEGRLLPFKDSHRTATTLREELLVEEEEEGD-----DVSNQRPSR 120

Query: 121 GRWKGFLGLKKSHNNASKKGCRNDGSSGSRDVGSGKRSFGWSSSSPSTRANSSHQVQNEG 180
           GRWKGFLGLKKSH NASKKG RNDGSSGSR+   GKR+FGWS SS  TRANSS +VQNE 
Sbjct: 121 GRWKGFLGLKKSH-NASKKGGRNDGSSGSRNGEDGKRAFGWSPSS-GTRANSS-EVQNEE 173

Query: 181 ESS 183
           ES+
Sbjct: 181 ESN 173

BLAST of Lsi10G005680 vs. ExPASy TrEMBL
Match: A0A6J1EMU8 (uncharacterized protein LOC111434969 OS=Cucurbita moschata OX=3662 GN=LOC111434969 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 4.1e-59
Identity = 145/189 (76.72%), Postives = 152/189 (80.42%), Query Frame = 0

Query: 1   MACLDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLKHQEQRSTAAPPPVSSSSDFEF 60
           MACLDMYNSDHKSLH RAPA SPRISFSSDFVDIQQSLK QEQRS AAP PV SSSDFEF
Sbjct: 1   MACLDMYNSDHKSLHHRAPA-SPRISFSSDFVDIQQSLKRQEQRSCAAPGPV-SSSDFEF 60

Query: 61  SVSNYSMMPADELFFEGRLLPYKDSNRATTTLRDELLVEEEEGDDNDDDNDVLHRPTSRG 120
           SVSNYSMM ADELFFEGRLLP+KDS+RA TTLRDELLVEEEE +D +++NDV  RP SRG
Sbjct: 61  SVSNYSMMTADELFFEGRLLPFKDSHRAATTLRDELLVEEEEEED-EEENDVSQRP-SRG 120

Query: 121 RWKGFLGLKKSHNNASKKGCRNDGSSGSRDVGSGKRSFGWSSSSPSTRANSSHQVQNEGE 180
            WKGFLGLKKS  NASKK               GKRS GW S SPST ANSS QVQNEG 
Sbjct: 121 SWKGFLGLKKS-QNASKK------------ASGGKRSLGW-SPSPSTTANSS-QVQNEGG 170

Query: 181 SSCKDVEID 190
           SSCKDVEI+
Sbjct: 181 SSCKDVEIE 170

BLAST of Lsi10G005680 vs. NCBI nr
Match: XP_038902682.1 (uncharacterized protein LOC120089319 [Benincasa hispida])

HSP 1 Score: 330.5 bits (846), Expect = 9.6e-87
Identity = 173/191 (90.58%), Postives = 178/191 (93.19%), Query Frame = 0

Query: 1   MACLDMY-NSDHKSLHRRAPATSPRISFSSDFVDIQQSLKHQEQRSTAAPPPVSSSSDFE 60
           MACLDMY NSDHKSLHRRAPA+SPRISFSSDFVDIQQSLKHQEQRS AAP PVSSSSDFE
Sbjct: 1   MACLDMYNNSDHKSLHRRAPASSPRISFSSDFVDIQQSLKHQEQRSAAAPAPVSSSSDFE 60

Query: 61  FSVSNYSMMPADELFFEGRLLPYKDSNRATTTLRDELLVEEEEGDDNDDDNDVLHRPTSR 120
           FSVSNY+MM ADELFFEGRLLPYKD+NR  TTLRDELL+EEEEGD+ DDDND L RPTSR
Sbjct: 61  FSVSNYNMMTADELFFEGRLLPYKDTNRTATTLRDELLIEEEEGDE-DDDNDALQRPTSR 120

Query: 121 GRWKGFLGLKKSHNNASKKGCRNDGSSGSRDVGSGKRSFGWSSSSPSTRANSSHQVQNEG 180
           GRWKGFLGLKKS NNASKKGCRNDGSSGSRDVG GKRSFGWSSSSPSTRANSSHQVQN G
Sbjct: 121 GRWKGFLGLKKSQNNASKKGCRNDGSSGSRDVGGGKRSFGWSSSSPSTRANSSHQVQNAG 180

Query: 181 ESSCKDVEIDF 191
            SSCKDVEIDF
Sbjct: 181 GSSCKDVEIDF 190

BLAST of Lsi10G005680 vs. NCBI nr
Match: XP_004148034.1 (uncharacterized protein LOC101205218 [Cucumis sativus] >KGN62010.1 hypothetical protein Csa_006289 [Cucumis sativus])

HSP 1 Score: 316.6 bits (810), Expect = 1.4e-82
Identity = 169/191 (88.48%), Postives = 175/191 (91.62%), Query Frame = 0

Query: 1   MACLDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLKHQEQRSTAAPPPVSSSSDFEF 60
           MACLDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLK+QEQRS A  PPVSSSSDFEF
Sbjct: 1   MACLDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLKYQEQRSAA--PPVSSSSDFEF 60

Query: 61  SVSNYSMMPADELFFEGRLLPYKDSNRATTTLRDELLVEEEEGDDNDDDNDVLHRPTSRG 120
           SVSNY+MM ADELFFEGRLLPYKDSNR  TTLR+ELLVEEEEG+D +DDND   RPTSRG
Sbjct: 61  SVSNYNMMTADELFFEGRLLPYKDSNRTATTLREELLVEEEEGED-EDDNDASQRPTSRG 120

Query: 121 RWKGFLGLKKSHNNASKKGCRNDGSSGSRDVGSGKRSFGWSSSSPSTRANSSHQVQNEGE 180
           RWKGFLGLKKSHNNASKKGCRNDGSS SRDV SGKR FGWSSSS STRANSSHQVQNEG 
Sbjct: 121 RWKGFLGLKKSHNNASKKGCRNDGSSSSRDVSSGKRPFGWSSSSSSTRANSSHQVQNEGS 180

Query: 181 -SSCKDVEIDF 191
            +SCKDVEIDF
Sbjct: 181 GTSCKDVEIDF 188

BLAST of Lsi10G005680 vs. NCBI nr
Match: XP_008457833.1 (PREDICTED: uncharacterized protein LOC103497420 [Cucumis melo] >KAA0045816.1 uncharacterized protein E6C27_scaffold243G003410 [Cucumis melo var. makuwa] >TYJ99465.1 uncharacterized protein E5676_scaffold123G00280 [Cucumis melo var. makuwa])

HSP 1 Score: 313.9 bits (803), Expect = 9.3e-82
Identity = 169/192 (88.02%), Postives = 174/192 (90.62%), Query Frame = 0

Query: 1   MACLDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLKHQEQRSTAAPPPVSSSSDFEF 60
           MACLDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLK+QEQRS A  PPVSSSSDFEF
Sbjct: 1   MACLDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLKYQEQRSAA--PPVSSSSDFEF 60

Query: 61  SVSNYSMMPADELFFEGRLLPYKDSNRATTTLRDELLVEEEEGDDNDDDNDVLHRPTSR- 120
           SVSNY+MM ADELFFEGRLLPYKDSNR  TTLR+ELLVEEEEGDD DD++D   RPTSR 
Sbjct: 61  SVSNYNMMTADELFFEGRLLPYKDSNRTVTTLREELLVEEEEGDDEDDNDDASQRPTSRP 120

Query: 121 GRWKGFLGLKKSH-NNASKKGCRNDGSSGSRDVGSGKRSFGWSSSSPSTRANSSHQVQNE 180
           GRWKGFLGLKKSH NNASKKGCRNDGSSGSRDV  GKR FGWSSSS STRANSS QVQNE
Sbjct: 121 GRWKGFLGLKKSHNNNASKKGCRNDGSSGSRDVSGGKRPFGWSSSSSSTRANSSQQVQNE 180

Query: 181 GESSCKDVEIDF 191
           G SSCKDVEIDF
Sbjct: 181 GGSSCKDVEIDF 190

BLAST of Lsi10G005680 vs. NCBI nr
Match: XP_023007016.1 (uncharacterized protein LOC111499636 [Cucurbita maxima])

HSP 1 Score: 241.5 bits (615), Expect = 5.9e-60
Identity = 146/183 (79.78%), Postives = 155/183 (84.70%), Query Frame = 0

Query: 1   MACLDMYNSD-HKSLHRRAPATSPRISFSSDFVDIQQSLKHQEQRSTAAPPPVSSSSDFE 60
           MACLDMYNSD HKSLHRRAPA SPRISFSSDFVDIQQSLKHQE RS AAP PVSSSSDFE
Sbjct: 1   MACLDMYNSDHHKSLHRRAPA-SPRISFSSDFVDIQQSLKHQE-RSAAAPAPVSSSSDFE 60

Query: 61  FSVSNYSMMPADELFFEGRLLPYKDSNRATTTLRDELLVEEEEGDDNDDDNDVLHRPTSR 120
           FSVSNYSMM ADELFFEGRLLP+KDS+R  TTLR+ELLVEEEE  D     DV ++  SR
Sbjct: 61  FSVSNYSMMSADELFFEGRLLPFKDSHRTATTLREELLVEEEEEGD-----DVSNQRPSR 120

Query: 121 GRWKGFLGLKKSHNNASKKGCRNDGSSGSRDVGSGKRSFGWSSSSPSTRANSSHQVQNEG 180
           GRWKGFLGLKKSH NASKKG RNDGSSGSR+   GKR+FGWS SS  TRANSS +VQNE 
Sbjct: 121 GRWKGFLGLKKSH-NASKKGGRNDGSSGSRNGEDGKRAFGWSPSS-GTRANSS-EVQNEE 173

Query: 181 ESS 183
           ES+
Sbjct: 181 ESN 173

BLAST of Lsi10G005680 vs. NCBI nr
Match: XP_023534650.1 (uncharacterized protein LOC111796161 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 239.2 bits (609), Expect = 2.9e-59
Identity = 145/183 (79.23%), Postives = 154/183 (84.15%), Query Frame = 0

Query: 1   MACLDMYNSD-HKSLHRRAPATSPRISFSSDFVDIQQSLKHQEQRSTAAPPPVSSSSDFE 60
           MACLDMYNSD HKSLHRRAPA SPRISFSSDFVDIQQSLKHQE RS AAP PVSSSSDFE
Sbjct: 1   MACLDMYNSDHHKSLHRRAPA-SPRISFSSDFVDIQQSLKHQE-RSAAAPAPVSSSSDFE 60

Query: 61  FSVSNYSMMPADELFFEGRLLPYKDSNRATTTLRDELLVEEEEGDDNDDDNDVLHRPTSR 120
           FSVSNYSMM ADELFFEGRLLP+KDS+R  TTLR+ELLVEEEE DD     DV ++  S 
Sbjct: 61  FSVSNYSMMSADELFFEGRLLPFKDSHRTATTLREELLVEEEEEDD-----DVSNQRPST 120

Query: 121 GRWKGFLGLKKSHNNASKKGCRNDGSSGSRDVGSGKRSFGWSSSSPSTRANSSHQVQNEG 180
           GRWKGFLGLKKSH NASKKG RNDGSSGSR+   GKR+FGWS SS  TRANSS +VQNE 
Sbjct: 121 GRWKGFLGLKKSH-NASKKGGRNDGSSGSRNGEDGKRAFGWSPSS-GTRANSS-EVQNEE 173

Query: 181 ESS 183
            S+
Sbjct: 181 GSN 173

BLAST of Lsi10G005680 vs. TAIR 10
Match: AT5G66800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 113.6 bits (283), Expect = 1.7e-25
Identity = 68/147 (46.26%), Postives = 92/147 (62.59%), Query Frame = 0

Query: 1   MACLDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLKHQEQRSTAAPPPVSSSS---D 60
           MACL+MYNS+           SPRISFS+DFV+I+       + S  +    SSSS   +
Sbjct: 1   MACLEMYNSNGGG----GTPMSPRISFSNDFVEIRPETTKTTRSSPLSKQEGSSSSFSDN 60

Query: 61  FEFSVSNYSMMPADELFFEGRLLPYKDSNRATTTLRDELLVEEEEGDDNDDDNDVL---- 120
           FEFSVSNY+MMPADELF +G+LLP+K++N+   TLR+ELLVEE+E +   D  ++     
Sbjct: 61  FEFSVSNYTMMPADELFSKGKLLPFKETNQVQRTLREELLVEEDEEEGPRDATNIFSLKP 120

Query: 121 --------HRPTSRGRWKGFLGLKKSH 133
                      +S+GRWKG LGLK++H
Sbjct: 121 PIFSSSSSSSSSSKGRWKGLLGLKRAH 143

BLAST of Lsi10G005680 vs. TAIR 10
Match: AT3G50640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66800.1); Has 67 Blast hits to 67 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 79.3 bits (194), Expect = 3.6e-15
Identity = 53/146 (36.30%), Postives = 85/146 (58.22%), Query Frame = 0

Query: 1   MACLDMYNSDHKSLHRRAPATSPRISFSSDFVDIQQSLKHQEQRSTAAPPPVS-SSSDFE 60
           MA L+M+NS +          + RISFS++FV+I+    + +  +  +    S  S+DF 
Sbjct: 1   MARLEMHNSMN---------GAARISFSNEFVEIRSEKSNAKSNNINSRSSFSMPSADFA 60

Query: 61  FSVSNYSMMPADELFFEGRLLPYKDSNRATTTLRDELLVEEEEGDDNDDDNDVLHRP--- 120
           FSV++YSM+PADE+F +G++LP+K+++    TL +ELL EEE      D N    RP   
Sbjct: 61  FSVTDYSMIPADEIFLKGKILPFKETSHVHRTLGEELLTEEE--GSMVDGNTFSLRPILL 120

Query: 121 -----TSRGRWKGFLGLKKSHNNASK 138
                +++G W+  LGLK++H  + K
Sbjct: 121 SSSSFSTKGTWRELLGLKRTHVRSKK 135

BLAST of Lsi10G005680 vs. TAIR 10
Match: AT4G34419.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19200.1). )

HSP 1 Score: 63.5 bits (153), Expect = 2.0e-10
Identity = 51/122 (41.80%), Postives = 65/122 (53.28%), Query Frame = 0

Query: 23  PRISFSSDFVDIQQSLKHQEQRSTAAPPPVSSSSDFEFSVSNYSMMPADELFFEGRLLPY 82
           PRISFSS F     + KH+  +   AP    SS DFEF V N+SM  ADE+FF+G +LP 
Sbjct: 18  PRISFSSGFA----ATKHEMIKYKEAP---VSSDDFEFGVENFSMTTADEIFFDGMILPL 77

Query: 83  KDSNRAT---TTLRDELLVEEEEGDDNDDDNDVLHRPTSRGRWKGFLGL-----KKSHNN 137
           K+    T   +TLR+EL   EE+GD     +       S G W+  LGL     KK H  
Sbjct: 78  KEEVNTTKRMSTLREEL--SEEDGDSPRSKS-----KGSSGWWRERLGLAFVRSKKDHKK 125

BLAST of Lsi10G005680 vs. TAIR 10
Match: AT3G19200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34419.1); Has 51 Blast hits to 51 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 4.3e-08
Identity = 50/120 (41.67%), Postives = 61/120 (50.83%), Query Frame = 0

Query: 24  RISFSSDFVDIQQSLKHQEQRSTA----APPPVSSSSDFEFSVSNYSM-MPADELFFEGR 83
           RISFS+DF D     KH   R+         PV  SSDF+F+V N+     ADE+FF G 
Sbjct: 18  RISFSNDFAD--SDSKHTASRADGQMKYKEAPV--SSDFKFNVENFGFTSAADEIFFGGV 77

Query: 84  LLPY-KDSNRATTTLRDELLVEEEEGDDNDDDNDVLHRPTSRGRWKGFLGLKKS---HNN 135
           LLP  K + R  TTLRDEL  +        D +  +    SR  WK  LGL KS   H+N
Sbjct: 78  LLPLEKTTQRKVTTLRDELSAQ--------DSDRTISSKGSRNWWK--LGLNKSKKIHSN 123

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LJI97.0e-8388.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285940 PE=4 SV=1[more]
A0A5A7TUK74.5e-8288.02Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3C6004.5e-8288.02uncharacterized protein LOC103497420 OS=Cucumis melo OX=3656 GN=LOC103497420 PE=... [more]
A0A6J1KZD62.8e-6079.78uncharacterized protein LOC111499636 OS=Cucurbita maxima OX=3661 GN=LOC111499636... [more]
A0A6J1EMU84.1e-5976.72uncharacterized protein LOC111434969 OS=Cucurbita moschata OX=3662 GN=LOC1114349... [more]
Match NameE-valueIdentityDescription
XP_038902682.19.6e-8790.58uncharacterized protein LOC120089319 [Benincasa hispida][more]
XP_004148034.11.4e-8288.48uncharacterized protein LOC101205218 [Cucumis sativus] >KGN62010.1 hypothetical ... [more]
XP_008457833.19.3e-8288.02PREDICTED: uncharacterized protein LOC103497420 [Cucumis melo] >KAA0045816.1 unc... [more]
XP_023007016.15.9e-6079.78uncharacterized protein LOC111499636 [Cucurbita maxima][more]
XP_023534650.12.9e-5979.23uncharacterized protein LOC111796161 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT5G66800.11.7e-2546.26unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G50640.13.6e-1536.30unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G34419.12.0e-1041.80unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G19200.14.3e-0841.67unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR31722:SF61SUBFAMILY NOT NAMEDcoord: 12..140
NoneNo IPR availablePANTHERPTHR31722OS06G0675200 PROTEINcoord: 12..140

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G005680.1Lsi10G005680.1mRNA