Lsi10G005570 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G005570
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Precursor of CEP6
Location	chr10: 8129991 .. 8130377 (+)
RNA-Seq Expression	Lsi10G005570
Synteny	Lsi10G005570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATTTACCATTTTCAAGCCATATGCCAATGTGCTATTCTTCTACTCACCATCTTCATAGCCTTTGGAACTCATCAAAGCCAAGGAAGGCCTTTGAAACCTCATTCTTCATCTCAAATTCCTCTCCACTCCTCTCCCGGTTACGGTTTTCGGGAGTCCGACGTGGGTAGCAAAGACGATTTTCGCCCCACGACACCCGGAAACAGCCCCGGAGTCGGCCACCATTCGGTCGGGAGAAGTGGTGTCATCGCTGCCATTGCTGCTGCCGGTCGATCGGTGCACAATACGGAAGGGTTGAAGGATGATTTCCGGCCAACCGCACCGGGACATAGCCCCGGCATTGGCCATGTTCTCCATCGCTTTGCTTCCAAACCAAATGCTTAG

mRNA sequence

ATGGGAATTTACCATTTTCAAGCCATATGCCAATGTGCTATTCTTCTACTCACCATCTTCATAGCCTTTGGAACTCATCAAAGCCAAGGAAGGCCTTTGAAACCTCATTCTTCATCTCAAATTCCTCTCCACTCCTCTCCCGGTTACGGTTTTCGGGAGTCCGACGTGGGTAGCAAAGACGATTTTCGCCCCACGACACCCGGAAACAGCCCCGGAGTCGGCCACCATTCGGTCGGGAGAAGTGGTGTCATCGCTGCCATTGCTGCTGCCGGTCGATCGGTGCACAATACGGAAGGGTTGAAGGATGATTTCCGGCCAACCGCACCGGGACATAGCCCCGGCATTGGCCATGTTCTCCATCGCTTTGCTTCCAAACCAAATGCTTAG

Coding sequence (CDS)

ATGGGAATTTACCATTTTCAAGCCATATGCCAATGTGCTATTCTTCTACTCACCATCTTCATAGCCTTTGGAACTCATCAAAGCCAAGGAAGGCCTTTGAAACCTCATTCTTCATCTCAAATTCCTCTCCACTCCTCTCCCGGTTACGGTTTTCGGGAGTCCGACGTGGGTAGCAAAGACGATTTTCGCCCCACGACACCCGGAAACAGCCCCGGAGTCGGCCACCATTCGGTCGGGAGAAGTGGTGTCATCGCTGCCATTGCTGCTGCCGGTCGATCGGTGCACAATACGGAAGGGTTGAAGGATGATTTCCGGCCAACCGCACCGGGACATAGCCCCGGCATTGGCCATGTTCTCCATCGCTTTGCTTCCAAACCAAATGCTTAG

Protein sequence

MGIYHFQAICQCAILLLTIFIAFGTHQSQGRPLKPHSSSQIPLHSSPGYGFRESDVGSKDDFRPTTPGNSPGVGHHSVGRSGVIAAIAAAGRSVHNTEGLKDDFRPTAPGHSPGIGHVLHRFASKPNA

Homology

[Close]

BLAST of Lsi10G005570 vs. ExPASy Swiss-Prot
Match: B3H5A9 (Precursor of CEP6 OS=Arabidopsis thaliana OX=3702 GN=CEP6 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.8e-10
Identity = 34/73 (46.58%), Postives = 41/73 (56.16%), Query Frame = 0


Query: 56  VGSKDDFRPTTPGNSPGVGHHSVGRSGVIAAIAAAGRSVHNTEGLKDDFRPTAPGHSPGI 115
           VG  DDF PT+PGNSPG+GH                 +  N  G KDDF PT PGHSPG+
Sbjct: 44  VGYTDDFGPTSPGNSPGIGH-------------KMKENEENAGGYKDDFEPTTPGHSPGV 101

Query: 116 GHVLHRFASKPNA 129
           GH +    ++PNA
Sbjct: 104 GHAVKN--NEPNA 101

[Close]

BLAST of Lsi10G005570 vs. ExPASy Swiss-Prot
Match: A0A1I9LMX5 (Precursor of CEP9 OS=Arabidopsis thaliana OX=3702 GN=CEP9 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07
Identity = 33/76 (43.42%), Postives = 38/76 (50.00%), Query Frame = 0


Query: 57  GSKDDFRPTTPGNSPGVGH---------------HSVGRSGVIAAIAAAGRSVHNTEGLK 116
           GS DDF PT+PG+SPGVGH               H  GR      +       H   G  
Sbjct: 93  GSTDDFAPTSPGHSPGVGHKKGNVNVESSEDDFKHKEGRK-----LQQTNGQNHFKTGST 152

Query: 117 DDFRPTAPGHSPGIGH 118
           DDF PT+PG+SPGIGH
Sbjct: 153 DDFAPTSPGNSPGIGH 163

[Close]

BLAST of Lsi10G005570 vs. ExPASy Swiss-Prot
Match: Q9SKW7 (Precursor of CEP10 OS=Arabidopsis thaliana OX=3702 GN=CEP10 PE=3 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 4.2e-04
Identity = 24/59 (40.68%), Postives = 31/59 (52.54%), Query Frame = 0


Query: 60  DDFRPTTPGNSPGVGHHSVGRSGVIAAIAAAGRSVHNTEGLKDDFRPTAPGHSPGIGHV 119
           +DF PT PG++ G+GH  V               ++N      DF PT PGHSPGIGH+
Sbjct: 66  NDFAPTNPGHNSGIGHPKV---------------INNK--FTKDFAPTNPGHSPGIGHL 107

[Close]

BLAST of Lsi10G005570 vs. ExPASy TrEMBL
Match: A0A5A7TR16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00110 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54
Identity = 108/128 (84.38%), Postives = 114/128 (89.06%), Query Frame = 0


Query: 1   MGIYHFQAICQCAILLLTIFIAFGTHQSQGRPLKPHSSSQIPLHSSPGYGFRESDVGSKD 60
           MG YHFQ ICQCAILLLTIFIAFGT+Q QGRPLKPH+SS IP HSS G GFRES+VGSKD
Sbjct: 1   MGNYHFQTICQCAILLLTIFIAFGTYQIQGRPLKPHTSSHIPSHSSLGDGFRESNVGSKD 60

Query: 61  DFRPTTPGNSPGVGHHSVGRSGVIAAIAAAGRSVHNTEGLKDDFRPTAPGHSPGIGHVLH 120
           DFRPTTPGNSPGVGHHSV RSG +AAIA+  + VHNTEGLKDDFRPTAPGHSPGIGHVLH
Sbjct: 61  DFRPTTPGNSPGVGHHSVQRSGTMAAIASNNQLVHNTEGLKDDFRPTAPGHSPGIGHVLH 120

Query: 121 RFASKPNA 129
             ASKPNA
Sbjct: 121 GIASKPNA 128

[Close]

BLAST of Lsi10G005570 vs. ExPASy TrEMBL
Match: A0A1S3C7Z6 (uncharacterized protein LOC103497520 OS=Cucumis melo OX=3656 GN=LOC103497520 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54
Identity = 108/128 (84.38%), Postives = 114/128 (89.06%), Query Frame = 0


Query: 1   MGIYHFQAICQCAILLLTIFIAFGTHQSQGRPLKPHSSSQIPLHSSPGYGFRESDVGSKD 60
           MG YHFQ ICQCAILLLTIFIAFGT+Q QGRPLKPH+SS IP HSS G GFRES+VGSKD
Sbjct: 1   MGNYHFQTICQCAILLLTIFIAFGTYQIQGRPLKPHTSSHIPSHSSLGDGFRESNVGSKD 60

Query: 61  DFRPTTPGNSPGVGHHSVGRSGVIAAIAAAGRSVHNTEGLKDDFRPTAPGHSPGIGHVLH 120
           DFRPTTPGNSPGVGHHSV RSG +AAIA+  + VHNTEGLKDDFRPTAPGHSPGIGHVLH
Sbjct: 61  DFRPTTPGNSPGVGHHSVQRSGTMAAIASNNQLVHNTEGLKDDFRPTAPGHSPGIGHVLH 120

Query: 121 RFASKPNA 129
             ASKPNA
Sbjct: 121 GIASKPNA 128

[Close]

BLAST of Lsi10G005570 vs. ExPASy TrEMBL
Match: A0A0A0LMN4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285370 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.3e-53
Identity = 106/128 (82.81%), Postives = 112/128 (87.50%), Query Frame = 0


Query: 1   MGIYHFQAICQCAILLLTIFIAFGTHQSQGRPLKPHSSSQIPLHSSPGYGFRESDVGSKD 60
           MG YHFQ ICQCAILLLTIFIAFGT+Q QGRP KP +SS IP HSS G GFRESDVGSKD
Sbjct: 1   MGNYHFQTICQCAILLLTIFIAFGTYQIQGRPFKPLTSSHIPSHSSLGDGFRESDVGSKD 60

Query: 61  DFRPTTPGNSPGVGHHSVGRSGVIAAIAAAGRSVHNTEGLKDDFRPTAPGHSPGIGHVLH 120
           DFRPTTPGNSPGVGHHS+ RSG +AAIA+ GR+VH TEGLKDDFRPTAPGHSPGIGHV H
Sbjct: 61  DFRPTTPGNSPGVGHHSIRRSGTMAAIASDGRAVHITEGLKDDFRPTAPGHSPGIGHVQH 120

Query: 121 RFASKPNA 129
             ASKPNA
Sbjct: 121 HIASKPNA 128

[Close]

BLAST of Lsi10G005570 vs. ExPASy TrEMBL
Match: A0A5J5BX94 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_003628 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 7.1e-15
Identity = 48/89 (53.93%), Postives = 53/89 (59.55%), Query Frame = 0


Query: 42  PLHSSPGYGFRESDVGSKDDFRPTTPGNSPGVGHHSVGRSGVIAAIAAAG--RSVHNTEG 101
           P+  +   GF  SD   KDDFRPTTPGNSPGVGH  VG    I A A        H+T G
Sbjct: 74  PMTPNQSLGFGNSDAVYKDDFRPTTPGNSPGVGHTFVGHKDDIQAKALGNDLADSHSTAG 133

Query: 102 LKDDFRPTAPGHSPGIGHVLHRFASKPNA 129
             DDFRPT PGHSPGIGH      ++PNA
Sbjct: 134 DTDDFRPTNPGHSPGIGHSFQNTNAEPNA 162

[Close]

BLAST of Lsi10G005570 vs. ExPASy TrEMBL
Match: A0A5J5BX86 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_003638 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 4.6e-14
Identity = 47/89 (52.81%), Postives = 52/89 (58.43%), Query Frame = 0


Query: 42  PLHSSPGYGFRESDVGSKDDFRPTTPGNSPGVGHHSVGRSGVIAAIAAAG--RSVHNTEG 101
           P+  +   GF  SD   KDDFRPTTPGNSPGVGH  VG    I A A        H+T G
Sbjct: 570 PMTPNQSLGFGNSDAVDKDDFRPTTPGNSPGVGHTFVGHKDDIQAKALGNDPADSHSTAG 629

Query: 102 LKDDFRPTAPGHSPGIGHVLHRFASKPNA 129
             DDFR T PGHSPGIGH      ++PNA
Sbjct: 630 DTDDFRHTNPGHSPGIGHSFQNTNAEPNA 658

[Close]

BLAST of Lsi10G005570 vs. NCBI nr
Match: XP_008457955.1 (PREDICTED: uncharacterized protein LOC103497520 [Cucumis melo] >KAA0045832.1 uncharacterized protein E6C27_scaffold243G003610 [Cucumis melo var. makuwa] >TYJ99451.1 uncharacterized protein E5676_scaffold123G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 222.2 bits (565), Expect = 2.5e-54
Identity = 108/128 (84.38%), Postives = 114/128 (89.06%), Query Frame = 0


Query: 1   MGIYHFQAICQCAILLLTIFIAFGTHQSQGRPLKPHSSSQIPLHSSPGYGFRESDVGSKD 60
           MG YHFQ ICQCAILLLTIFIAFGT+Q QGRPLKPH+SS IP HSS G GFRES+VGSKD
Sbjct: 1   MGNYHFQTICQCAILLLTIFIAFGTYQIQGRPLKPHTSSHIPSHSSLGDGFRESNVGSKD 60

Query: 61  DFRPTTPGNSPGVGHHSVGRSGVIAAIAAAGRSVHNTEGLKDDFRPTAPGHSPGIGHVLH 120
           DFRPTTPGNSPGVGHHSV RSG +AAIA+  + VHNTEGLKDDFRPTAPGHSPGIGHVLH
Sbjct: 61  DFRPTTPGNSPGVGHHSVQRSGTMAAIASNNQLVHNTEGLKDDFRPTAPGHSPGIGHVLH 120

Query: 121 RFASKPNA 129
             ASKPNA
Sbjct: 121 GIASKPNA 128

[Close]

BLAST of Lsi10G005570 vs. NCBI nr
Match: XP_011650158.1 (precursor of CEP9 [Cucumis sativus])

HSP 1 Score: 218.0 bits (554), Expect = 4.7e-53
Identity = 106/128 (82.81%), Postives = 112/128 (87.50%), Query Frame = 0


Query: 1   MGIYHFQAICQCAILLLTIFIAFGTHQSQGRPLKPHSSSQIPLHSSPGYGFRESDVGSKD 60
           MG YHFQ ICQCAILLLTIFIAFGT+Q QGRP KP +SS IP HSS G GFRESDVGSKD
Sbjct: 1   MGNYHFQTICQCAILLLTIFIAFGTYQIQGRPFKPLTSSHIPSHSSLGDGFRESDVGSKD 60

Query: 61  DFRPTTPGNSPGVGHHSVGRSGVIAAIAAAGRSVHNTEGLKDDFRPTAPGHSPGIGHVLH 120
           DFRPTTPGNSPGVGHHS+ RSG +AAIA+ GR+VH TEGLKDDFRPTAPGHSPGIGHV H
Sbjct: 61  DFRPTTPGNSPGVGHHSIRRSGTMAAIASDGRAVHITEGLKDDFRPTAPGHSPGIGHVQH 120

Query: 121 RFASKPNA 129
             ASKPNA
Sbjct: 121 HIASKPNA 128

[Close]

BLAST of Lsi10G005570 vs. NCBI nr
Match: KAE8651918.1 (hypothetical protein Csa_006213 [Cucumis sativus])

HSP 1 Score: 182.6 bits (462), Expect = 2.2e-42
Identity = 87/109 (79.82%), Postives = 95/109 (87.16%), Query Frame = 0


Query: 20  FIAFGTHQSQGRPLKPHSSSQIPLHSSPGYGFRESDVGSKDDFRPTTPGNSPGVGHHSVG 79
           ++AFGT+Q QGRP KP +SS IP HSS G GFRESDVGSKDDFRPTTPGNSPGVGHHS+ 
Sbjct: 7   YLAFGTYQIQGRPFKPLTSSHIPSHSSLGDGFRESDVGSKDDFRPTTPGNSPGVGHHSIR 66

Query: 80  RSGVIAAIAAAGRSVHNTEGLKDDFRPTAPGHSPGIGHVLHRFASKPNA 129
           RSG +AAIA+ GR+VH TEGLKDDFRPTAPGHSPGIGHV H  ASKPNA
Sbjct: 67  RSGTMAAIASDGRAVHITEGLKDDFRPTAPGHSPGIGHVQHHIASKPNA 115

[Close]

BLAST of Lsi10G005570 vs. NCBI nr
Match: KAG6571310.1 (Precursor of CEP6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 156.0 bits (393), Expect = 2.2e-34
Identity = 82/123 (66.67%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 5   HFQAICQCAILLLTIFIAFGTHQSQGRPLKPHSSSQIPLHSSPGYGFRESDVGSKDDFRP 64
           HFQAI  C +LLLTIFIA GTHQ QGRPLKP +          G  FRESD+G KDDF P
Sbjct: 4   HFQAITHCLLLLLTIFIAIGTHQIQGRPLKPPT----------GVSFRESDLGCKDDFNP 63

Query: 65  TTPGNSPGVGHHSVGRSGVIAAIAAAGRSVHNTEGLKDDFRPTAPGHSPGIGHVLHRFAS 124
            T GNSPGVGHHSV R G    +A  GRSVH TEGLK+DFRPT PGHSPGIGH   R AS
Sbjct: 64  ETLGNSPGVGHHSVRRCG----MADVGRSVHYTEGLKNDFRPTVPGHSPGIGHAYPRTAS 112

Query: 125 KPN 128
           KPN
Sbjct: 124 KPN 112

[Close]

BLAST of Lsi10G005570 vs. NCBI nr
Match: KAG7019315.1 (Precursor of CEP6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 153.7 bits (387), Expect = 1.1e-33
Identity = 81/123 (65.85%), Postives = 86/123 (69.92%), Query Frame = 0


Query: 5   HFQAICQCAILLLTIFIAFGTHQSQGRPLKPHSSSQIPLHSSPGYGFRESDVGSKDDFRP 64
           HFQAI  C +LLLTIFIA GTHQ QGRPLKP +          G  FRESD+G K DF P
Sbjct: 4   HFQAITHCLLLLLTIFIAIGTHQIQGRPLKPPT----------GVSFRESDLGCKRDFNP 63

Query: 65  TTPGNSPGVGHHSVGRSGVIAAIAAAGRSVHNTEGLKDDFRPTAPGHSPGIGHVLHRFAS 124
            T GNSPGVGHHSV R G    +A  GRSVH TEGLK+DFRPT PGHSPGIGH   R AS
Sbjct: 64  ETLGNSPGVGHHSVRRCG----MADVGRSVHYTEGLKNDFRPTVPGHSPGIGHAYPRIAS 112

Query: 125 KPN 128
           KPN
Sbjct: 124 KPN 112

[Close]

BLAST of Lsi10G005570 vs. TAIR 10
Match: AT5G66816.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11
Identity = 34/73 (46.58%), Postives = 41/73 (56.16%), Query Frame = 0


Query: 56  VGSKDDFRPTTPGNSPGVGHHSVGRSGVIAAIAAAGRSVHNTEGLKDDFRPTAPGHSPGI 115
           VG  DDF PT+PGNSPG+GH                 +  N  G KDDF PT PGHSPG+
Sbjct: 44  VGYTDDFGPTSPGNSPGIGH-------------KMKENEENAGGYKDDFEPTTPGHSPGV 101

Query: 116 GHVLHRFASKPNA 129
           GH +    ++PNA
Sbjct: 104 GHAVKN--NEPNA 101

[Close]

BLAST of Lsi10G005570 vs. TAIR 10
Match: AT3G50610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66816.1); Has 125 Blast hits to 60 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 10; Fungi - 4; Plants - 97; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 9.9e-09
Identity = 33/76 (43.42%), Postives = 38/76 (50.00%), Query Frame = 0


Query: 57  GSKDDFRPTTPGNSPGVGH---------------HSVGRSGVIAAIAAAGRSVHNTEGLK 116
           GS DDF PT+PG+SPGVGH               H  GR      +       H   G  
Sbjct: 79  GSTDDFAPTSPGHSPGVGHKKGNVNVESSEDDFKHKEGRK-----LQQTNGQNHFKTGST 138

Query: 117 DDFRPTAPGHSPGIGH 118
           DDF PT+PG+SPGIGH
Sbjct: 139 DDFAPTSPGNSPGIGH 149

The following BLAST results are available for this feature:

BLAST of Lsi10G005570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3H5A9	1.8e-10	46.58	Precursor of CEP6 OS=Arabidopsis thaliana OX=3702 GN=CEP6 PE=1 SV=1	[more]
A0A1I9LMX5	1.4e-07	43.42	Precursor of CEP9 OS=Arabidopsis thaliana OX=3702 GN=CEP9 PE=1 SV=1	[more]
Q9SKW7	4.2e-04	40.68	Precursor of CEP10 OS=Arabidopsis thaliana OX=3702 GN=CEP10 PE=3 SV=2	[more]

BLAST of Lsi10G005570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TR16	1.2e-54	84.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C7Z6	1.2e-54	84.38	uncharacterized protein LOC103497520 OS=Cucumis melo OX=3656 GN=LOC103497520 PE=...	[more]
A0A0A0LMN4	2.3e-53	82.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285370 PE=3 SV=1	[more]
A0A5J5BX94	7.1e-15	53.93	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_003628 PE=3 SV=1	[more]
A0A5J5BX86	4.6e-14	52.81	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_003638 PE=4 SV=1	[more]

BLAST of Lsi10G005570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457955.1	2.5e-54	84.38	PREDICTED: uncharacterized protein LOC103497520 [Cucumis melo] >KAA0045832.1 unc...	[more]
XP_011650158.1	4.7e-53	82.81	precursor of CEP9 [Cucumis sativus]	[more]
KAE8651918.1	2.2e-42	79.82	hypothetical protein Csa_006213 [Cucumis sativus]	[more]
KAG6571310.1	2.2e-34	66.67	Precursor of CEP6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7019315.1	1.1e-33	65.85	Precursor of CEP6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lsi10G005570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66816.1	1.2e-11	46.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G50610.1	9.9e-09	43.42	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..78
None	No IPR available	PANTHER	PTHR33348:SF29	PRECURSOR OF CEP1-RELATED	coord: 44..128
IPR033250	C-terminally encoded peptide	PANTHER	PTHR33348	PRECURSOR OF CEP5	coord: 44..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G005570.1	Lsi10G005570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902025	nitrate import
biological_process	GO:1901371	regulation of leaf morphogenesis
biological_process	GO:2000280	regulation of root development
biological_process	GO:0007165	signal transduction
biological_process	GO:0048364	root development
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005179	hormone activity