Lsi10G004510 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G004510
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	auxin-responsive protein SAUR24-like
Location	chr10: 6623257 .. 6623550 (+)
RNA-Seq Expression	Lsi10G004510
Synteny	Lsi10G004510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTGGCAGTTTATGTAGGAGAAATCCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACCATCCGTCGTTTCAACAACTGCTCAGCCACGCAGAGGAAGAGTTTGGCTTCCATCATCCTAAAGGAGGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTAGCTTGA

mRNA sequence

ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTGGCAGTTTATGTAGGAGAAATCCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACCATCCGTCGTTTCAACAACTGCTCAGCCACGCAGAGGAAGAGTTTGGCTTCCATCATCCTAAAGGAGGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTAGCTTGA

Coding sequence (CDS)

ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTGGCAGTTTATGTAGGAGAAATCCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACCATCCGTCGTTTCAACAACTGCTCAGCCACGCAGAGGAAGAGTTTGGCTTCCATCATCCTAAAGGAGGCCTAACAATTCCTTGCAAAGAAGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTAGCTTGA

Protein sequence

MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA

Homology

[Close]

BLAST of Lsi10G004510 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-23
Identity = 54/84 (64.29%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 12 AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK+IL   +G        PKG +AVYVGE Q KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPKGGLTIPCKEDAFIDLTSRLQ 96
           HP GGLTIPC ED FI++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Lsi10G004510 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 6.8e-23
Identity = 52/79 (65.82%), Postives = 59/79 (74.68%), Query Frame = 0


Query: 17 KMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKG 76
          K+ S  T      PKG +AVYVGE Q KR++VPISYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Lsi10G004510 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-22
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFID 89
          PKG +AVYVGE Q KR++VP+SYLN PSFQ LLS +E+EFGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of Lsi10G004510 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.0e-22
Identity = 51/81 (62.96%), Postives = 63/81 (77.78%), Query Frame = 0


Query: 19 QSGFTKNQ-----LDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHH 78
          ++ F+ NQ     +DV KG++AVYVGE +M+RFV+P+SYLN PSFQ LLS AEEEFG+HH
Sbjct: 10 KASFSANQASSKAVDVEKGYLAVYVGE-KMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHH 69

Query: 79 PKGGLTIPCKEDAFIDLTSRL 95
          P GGLTIPC ED F  +TS L
Sbjct: 70 PNGGLTIPCSEDVFQHITSFL 89

[Close]

BLAST of Lsi10G004510 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.6e-22
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFID 89
          PKG +AVYVGE Q KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC ED FI+
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 83 VTSRLQ 88

[Close]

BLAST of Lsi10G004510 vs. ExPASy TrEMBL
Match: A0A6J1JHE3 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.0e-47
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LLSHAEE+FGFHHP+GGLTIPCKEDAFIDLTSRLQV+
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Lsi10G004510 vs. ExPASy TrEMBL
Match: A0A6J1FVI4 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448832 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.0e-47
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LLSHAEE+FGFHHP+GGLTIPCKEDAFIDLTSRLQV+
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Lsi10G004510 vs. ExPASy TrEMBL
Match: A0A6J1FU83 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448831 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.6e-46
Identity = 92/97 (94.85%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRF+VPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFMVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LLSHAEE+FGFHHP+GGLTIPCKEDAFIDLTSRLQV+
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Lsi10G004510 vs. ExPASy TrEMBL
Match: A0A6J1FU85 (auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC111448836 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.0e-45
Identity = 91/97 (93.81%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQ GFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LLSHAEE+FGFHHP+GGLTIPCKEDAFIDLTSRL V+
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS 97

[Close]

BLAST of Lsi10G004510 vs. ExPASy TrEMBL
Match: A0A6J1G6T7 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111451395 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.9e-45
Identity = 90/97 (92.78%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQILKMQSGFTK+QLDVPKGHVAVYVGEIQ KRF+VPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LLSHAEEEFGFHHP+GGLTIPCKEDAFIDLTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Lsi10G004510 vs. NCBI nr
Match: XP_038901159.1 (auxin-responsive protein SAUR24-like [Benincasa hispida])

HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LL HAEEEFGFHHP+GGLTIPCKEDAFIDLTSRLQV+
Sbjct: 61 LLRHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Lsi10G004510 vs. NCBI nr
Match: XP_022944365.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022986731.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986733.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986734.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986735.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >KAG6571048.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196.1 bits (497), Expect = 1.4e-46
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LLSHAEE+FGFHHP+GGLTIPCKEDAFIDLTSRLQV+
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Lsi10G004510 vs. NCBI nr
Match: XP_022944366.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6571052.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 194.9 bits (494), Expect = 3.2e-46
Identity = 92/97 (94.85%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRF+VPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFMVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LLSHAEE+FGFHHP+GGLTIPCKEDAFIDLTSRLQV+
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Lsi10G004510 vs. NCBI nr
Match: XP_023512611.1 (auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.9 bits (494), Expect = 3.2e-46
Identity = 92/97 (94.85%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LL+HAEE+FGFHHP+GGLTIPCKEDAFIDLTSRLQV+
Sbjct: 61 LLNHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Lsi10G004510 vs. NCBI nr
Match: KAG6571056.1 (Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.0 bits (489), Expect = 1.2e-45
Identity = 92/97 (94.85%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          LLSHAEE+FGFHH +GGLTIPCKEDAFIDLTSRLQV+
Sbjct: 61 LLSHAEEKFGFHHAQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Lsi10G004510 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.8 bits (299), Expect = 1.2e-27
Identity = 59/97 (60.82%), Postives = 71/97 (73.20%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILK----MQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHP 60
          M IR   ++  +KQIL+    + S  + + LDVPKG++AVYVGE  MKRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSR 94
          SFQ LL  AEEEFGF HP GGLTIPC E+ FIDL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of Lsi10G004510 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.1 bits (292), Expect = 8.0e-27
Identity = 61/105 (58.10%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 1   MGIRFLSLVPHAKQILKMQSGFTKNQLD------VPKGHVAVYVG---EIQMKRFVVPIS 60
           MG+   ++    KQILK+ S   +N+        VPKGHVAVYVG   E++ KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDL-TSRLQ 96
           +LNHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of Lsi10G004510 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 116.3 bits (290), Expect = 1.4e-26
Identity = 57/98 (58.16%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE-IQMKRFVVPISYLNHPSFQ 60
          M IR   ++  +KQ+LK  S  + N + +PKGH+AVYVGE +Q +RFVVP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLS-HSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQVA 98
          +LL  AEEEFGF HP GGLTIPC E  FIDL SRL  +
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Lsi10G004510 vs. TAIR 10
Match: AT4G34790.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.2 bits (274), Expect = 9.7e-25
Identity = 57/102 (55.88%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 7   SLVPHAKQILKMQSGFTKNQLD-----------VPKGHVAVYVGE-IQMKRFVVPISYLN 66
           S++P+AKQI K QS   KN              VPKGHVAVYVGE ++ KRFVVPISYLN
Sbjct: 6   SMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVVPISYLN 65

Query: 67  HPSFQQLLSHAEEEFGFHHPKGGLTIPCKEDAFIDLTSRLQV 97
           HP F++ L+ AEEE GFHH  GGLTIPC+E++F+ L +  Q+
Sbjct: 66  HPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQL 107

[Close]

BLAST of Lsi10G004510 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.2 bits (274), Expect = 9.7e-25
Identity = 54/84 (64.29%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 12 AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK+IL   +G        PKG +AVYVGE Q KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPKGGLTIPCKEDAFIDLTSRLQ 96
           HP GGLTIPC ED FI++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

The following BLAST results are available for this feature:

BLAST of Lsi10G004510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK62	1.4e-23	64.29	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	6.8e-23	65.82	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	1.5e-22	72.73	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
P33083	2.0e-22	62.96	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q9FJF9	2.6e-22	72.73	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]

BLAST of Lsi10G004510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JHE3	7.0e-47	95.88	auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398...	[more]
A0A6J1FVI4	7.0e-47	95.88	auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A6J1FU83	1.6e-46	94.85	auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A6J1FU85	1.0e-45	93.81	auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A6J1G6T7	2.9e-45	92.78	auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114513...	[more]

BLAST of Lsi10G004510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901159.1	1.1e-46	95.88	auxin-responsive protein SAUR24-like [Benincasa hispida]	[more]
XP_022944365.1	1.4e-46	95.88	auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-...	[more]
XP_022944366.1	3.2e-46	94.85	auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6571052.1 Auxin-re...	[more]
XP_023512611.1	3.2e-46	94.85	auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]	[more]
KAG6571056.1	1.2e-45	94.85	Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lsi10G004510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	1.2e-27	60.82	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	8.0e-27	58.10	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	1.4e-26	58.16	SAUR-like auxin-responsive protein family	[more]
AT4G34790.1	9.7e-25	55.88	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	9.7e-25	64.29	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 e-value: 1.8E-26 score: 92.1
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..95
None	No IPR available	PANTHER	PTHR31929:SF121	AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE	coord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G004510.1	Lsi10G004510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin