Lsi10G002870 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi10G002870
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionexpressed protein localized to the inner membrane of the chloroplast.
Locationchr10: 4621438 .. 4630992 (-)
RNA-Seq ExpressionLsi10G002870
SyntenyLsi10G002870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCGGTCAACTTGGGGGTTCGCTTCCTGATCGGGGAAGCTACTCGATTTTGGGGAGATTTTTGCTAATACTACCAAGAGATATATGGTTCGAATTTTCGATGTTGATTTGAAAGAGTGATAAATGTATAATTAATAATCTAGTTATATAATACAAAAATGGTAATAGAGGTGAACAAAAGCCGGCTATCTTCAACACTCTCTTGTTCGTTCTGCCTCGTTTCTCTCTCTCTCCAATTCTCTCTAGATCTCTCCTCTGAGTCCTCTCCTTCCACATGGCCGCCTGCTTTTCTCCGTCACTCTCCGTATCTGGTATATCTTCTCTTTTCTCTCTTAACATAGCAGTTCTAGGTTTTCCTTTCCATATGCATATTCACATGATTGTGCGTTTGTTTCGAGTGATCGAGTTGGTTCAACTATATCCTTAGTAATTATCGCCTGTTAGGTTTTCTTTAAAAAGCTCTGGAAATGGATGGATTAAGAAGAAAATAATTTTGTATTCAATGTCTTGAACTTTATTAGGCATGCCCTTACGTTGATGGATTTTGGATTAACATTGAGTTCGATGTAGATTGCTGTTCTGGAAGTTTTATAATTTCGAGAAGTTTTTTGAATGTTAGATTGTTGATTTTTTTTTTTTTTTTTTACTCTTTGTCCCCTCGTTTTTAACGACAGATTTTCTTGGAAACAACTTTAGAAAGTTATGATTTCTTCGAATTTTGTGTGAATTTCTGGACGAAAATTGAAGGTGGTAATCTCGACTGCTTTTGAAACTTGATCGATTAAAATTTTAGTTCTATTTCTCTTTGCTTAGCTTGTTTGTTTTCACAAGGTAATCCATCTGTACTTCGTTCTTAATTTTCCTTTTTTTTTTTTTTTTCGTTCTTTCATTCTTTCCTTCTGTGTTTAGGGGGACTGGTCAAGGCCTCAGATCTCTCCTCAAAGTCCATTTCCTTTGGGCAAGCACCAAAAGTCGCCATTCAGAGGAAGTGCTCGAGAACCAACCACAAGTTATCAGTCCGTGCTGAGTACAAGTACGTTGTAGTTTAAAGAACAAGGCTTACTAAACTTAATTTTTTCATGGTTGAAATATTTTGTTCTTATTAAAGTCACGTAGGCTGTATTTCAGCATGAACTGAGATGGATACGAGGGATTTATCTTTTAGTGTTGGACTTCTAAAGTTTCATGAATCTGAAATTATTTCGGAGAGCTGGCTTTTTGAGCGATATTAGTTACTAAAAATTCAAGTTAGTGGAAGAATGTCGTGCAGTTGCAATACCAATCAAACATGCTTATCAGAAAAGAAGGTGCTGGGTGAGAGTAGGGATGAGCAGTTAGGAGAACATGTAAAATAAGAAAGAATGACGATTCTTTTTGTTCTTTGTTTTGTTTTTTTATGTATATATAAAACATAAAGCAAGACCTACTGAGTAATTAAAAAAAAACCTTTGCAATTGAAGTCTGAAGAGAAACATGAAATCTAGCGAGGGACCACACATTACTCAAGTCTCTTTCCAAGCCTCTCAACACTCTATTTTTCCTCTCACTAGAAAGATTCCACCATAAAGCACACATTCTGGCAAGCCACAAGAAATGACCATTTTTCCTAAAAGGCGGATGAAGAAGGAACTCCTCAATCATCTTATTTAGGTCTCTATGGCAGGCCAACTGAAAGTCGTATGTCTCAAAGAAATAACTCCATACGAGCATGCAAAATCACACCTCCAAAGGAAATGATCTAGGTCTTCCTTCGCCTTCCGATAGAGGATACAACAAAATGAGGCAATGAATGGATGCCACTTTCTTGAAAGCCGATCCATAATGTTAACATGACCTATAACTCTTACCAGACAAAGAACTCAATATTTTTTGGAATCTTGATCTTCCAGAGACCCGAGAAAATAGAGTCTAATGGGAGAAGGGTCTAGTAAGTAACAAAAGAAGGAACTACAAGAGAAGCCTCCCGAAGGGTTAGGACTCCAAATACACACATCTCTTCTCCCAATCCTAAAATTAACCTTTCGTATCAAAGATAGGGGCACTATAACATCCTTTGTTTTCCTGTTGGACAAAGGGTGACATAACTCGAACGAAAAAGAGAGAGCTCTCAGCTCTTAGACCTACTAAGCCACATTTTTTTTAAATAAAAAAAAACACAATGGACAAGATGAGAGAATGAGGGGAGCTCAGAGGAAATATCCTTACACAAATTTCTGTGTTTTCCTTTAATCTAATTCAACCACCACTCAAAGGAGTGAGACCCATACTTACTCGTAATGACCCTCCACTACAGGGAACTAGATTTGAGGGGAAAATGCCAAAACCATTTTGCCAACAGGGCTTTGTTACAAGTCTGTAAATTCCCTAGTTCAAGCCCTCCCATGTCACTGGCTCAGCCCACAAGGTGGGTTCCTCACCTTTATCTACCCCTTCCTACAAGAAGTCCCTCATAAGCTTCTCTATACTTTTACAAATTGAACAAGGAGCTCTTAAGAGGGAGAAGTAGTAAATTGGGACACCGCTCAACACATACATGATAAGTGTATGTCTACTGCCTTTTGAAAAGAAAAAACTACTTTTCCAAGAGGCGAACATCTTTTTAACCTTGTCCATGACTAGATTTCTAAGAAATCTTTCTGGGGTTATTTCCAAGGGGAAGGCGAAAATACGAGTAGGTGAAGGATGACGATTGTGAACACATAGTGAAAAGGAGAGCAGTGTTCTCAATTTTTAAAACCTAGGTCAAAAAGTACATTTGGTCCTTGAATTTTAGTTGGTAACGATTTAGTCTATACTTTTAAATTTGTAACAATTTAGTCATAGAACTTTAACATGTAACAATTTAGTTTTTGTATTTTACAATTTATAATGTTAAGGTCCTTATTGTGAAAAATATTATTAAGATTTAATGAAATTTCTTACGCATGTCGATTGATAAATTGATCGAGAATCTCTCCCCCCCCCCCCCCCCCCCCCCCTTTTTTTATTTTTTTTATTTTTATTTTAAATAAACTATAAAAACCAAGTCACTACATGATAAAAGTTGACACTTAATCTTGAAGAGATTTTTCATGATAGGATTAAATTGTTATGAATTTCAAAGTAGGGACTAAATTGTTACTTGTTAAAGTTTAGAAACAAAATTTGGAAGTACAGAGACTAAATGTTACCAATTAAAGTTCAAGGACTAAATTGTTACTTCTATGAAAGTTTAGGGACCAAAAGTGTTTTTTAACCTAAAACCTAGACTTTTCAAGATGAAGGATTCTACTATGATGCATTATTAGTAGATTCTTATCAATAGGTTAATGAGAATACAATCCCAAATTGAATTTTACTGTATAACTTGAGGGATCCATCTCTAGTGAAGCATGCCTCATTTATTTATGAGGTAAGCGCCATGGTTCTTTTCCTTAGATTTTCAAGCTTAAGACCACCAGTTTTTTTAATCTATAGAAACTATGTTGCAGTTGAAAAGATGAATTCCATCCTCCTTTCCCCTACTAGAAGGCCCAAATAAATTTCCTTATATATTCTCCAAAGATGAACTACCATTTCATGGGTTTTGAAAAAAGAGGGTAAATTGGAGTTAACCATCATGGGTTGGCCTAGTGGTAAAAAGGAGACAAAGTCTCAATAAATGGCTAAGAGGTCATGGGTTTAATCCATTGCGGCCACCTACTTAGGAATTAATTTCCTATGAGTTTCCTTGACACCCAAATGTTGTAAGGTCAGGCGGGTTGTCCCGTGAGATTAGTCGAGGTGCGCGTAAGTTGGCCCGGACACTCACGGATATCAAAAGAAAAAAAAAAAAGAAAAGAGAGAGTAAATTGGAGTAATATTAATTTTTTATCCCTAAATGTAAAAAAAGAAAAAAAAAAGGCACAACTTTATTTTGTTCTAGGGAGGAAACTGTACTTTATATGAAGAGATAGAATTAACAATAAGGAGAGAAGACAAAGGATCCTTTCTTGAGATGTTAAAAGGAGATTACCATCATGGGTTAACCGGGTGGTAAATAGGGGGCATAACCTTGATAAAGGGCTAAGAAGTCATGGGTTCAATCTATGGTGGCATGACTACCTACCTAGGATTTAATATCCTACGAGTTTCCTTGACACCCAAATGTTGTAGGGTCAGGCGGGTTGTTGTGAGATTAATAGAGGTGTATATAAGTTAGCTGGCTGGGACACTTACAGATATCCCAAAAAAAAAAAAAACTCTCAGTTTAAAGTTTTAGTTTTTTTTTGTTCTTTGTTTTTTGTTTTATTTTTAAATTTAGATGTATGTAGACCTAGAAAGCACGGACACGTGTCCGACACCGACACGCCGACATGCGCCGGACACGTGTCAGACACGCGGAATTTCGTGTCCCTTTTTTTTTTTAAACTCGACACGCGCGGACACGCTCGAGACACGCGGGGGACATGCGCCAGACTTTTTTTTTTAAAAAAATTATTTTATTCTTTTTTTTAAATACCAAAACCCTATCAGACCTCTGAATGTCAATACCCTCTGGCCTCTCAGTTTCAGCCGCACCTTCTCTCTATCTCTGCTGCTCGTGGTCTCGCCGGACGCCACCGTATCTTGCCGGACGCCGCCGCCACGCCATATCTCGCCAGACCCATCTGAGGCTCCGGACGCAGCCGCCACGCCATTTCTCGCCAGACCCATCTGAGGCTCCGACTCTCACCTTTCCGGCTTTCCCTTTCCGCCGCTCAAGCCTCTAAGGTTTCTTTCCCCCGTTTTTTTTTTTTTCCCTTCAGTTCTCTTGATTCTCATTTCTCACTTTTGAAGCTCGATTTGAACCCTAGTTTTTTTAATTAGTGGATATTTTTTAAGAATGAAAAAAAATTAGTAGGTTATATTTTTTTTTTAACTCATCCATTCAATTTTCTTTATTAGATGACATCTTCCTCTTCATCTACATCTAGTAATACTGGTCAATCATCAACAATTCCTTCAATTCTAAACCCTATTAGACAACCAATGTACTCTTTATTTATGTTTTAAAGAAGTATTGTATGTTCAATATATGATATTAATTTATCTACAAGTATTATCACATATATTATTTTTAAAAAAATATATAAAAAATATAACGTGTCCCCAACGTGGCGTGTCGTACATTTCTAGAAATTGGCGTGTCGTCGTGTCGCATCGCGTGTCAGTGTCCGTGCTTCCTAGATGTAGACCATAACACGCCTGTTGAATGTGAAATTTATACTTCCATTTTAGTACATAGAATTTTTAAAAGTTTCTAATTAATGTAATAGTCTTTTACATTGTTTGACTCGAATAGTTGTAACTATTTGAAGAAAGAGACAAAATAAGAATTTATGAGATTTTAAGGGGTAAAGGACGTGATTGTTTGTTCAAACATATCTCCATAGTTAGATTGTGATGTTTCATCTCTATTGTCTAACTGATATTCATACACATATGATATACCACTTCATCATGTAGCCACTTTGACTCGAATAGTTCTAATGGAGGAAAGGACATGACTGTCTGTTCAAACATATCTCCACCGTTAGATCAGGATGGTTCATGTCAATGGTCTATGTGACACACTCATATAGGAAAGGATATATCACTTCGTCGTGTAATCATTTTGACCCAATATTTGTAACGAGGCAAAGAACATGATTTGTCTATCCAAACATATCTTCTCCATTAGATGGTGAAGTTTCATATCTTTAGTTTATATCATACTCATACACATACTCATACACCACTTCGCGTGCAGCCACCTCAACCTGCATAGCTCTAATGAAGTATATTGTAGACATTATCAAAAGATGTAAGGGCAAAATGGGAATGTAAAGATTCTCTCCTCATAGTTATTTTTTATATATAGTATAGATTTTAGATTTTCAATTTTACAAATGAATTTTAGTATTAATAAATTGTCACATAAAAATGATATTTCATTATAGACATTTGTTTACTCCTGTAGTAGCTTTTTCCTCTGGGTACTTGAAAGTTAAAGTTCTGGATGTTGTTTCGTCTGGTTTGCCTTTGTTACTAGTTCCTTACTGTTCAGCATGAATACCAAAACTCCATTGATGAGGTTTCATTAAAACAAGAACCCAACAAGGCATTCTCAAGACAGAGAAATTAATTGCAATAAGAAAGGACTGTATGATATCAAACTCCTTTGTAAATCTTGTTGTTTCTTTCCTACGGTTCTAGATTATCAGAATGATAAATTCAGCTTAGCCTTGGATGCAAATACATTTAATGATCCGTTTAAAAAGTTATATAAGCTCTTCTAAGTTTTGAAAGCAGCCCAATTCTATTTACTCCAGGAATTTATTCCCTATGAGGAAATTCTTTATTTTCTTCCTGAAGGGTAGTTGGACTAATAGTTACGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTATTAAGATTTATACATAATTGAAAGCTTAAGAACATATTAGATATCATCTAGAAAAGTTTATTATTTTTTAATTTAACTTAAATATTAATTTAGAAAAATGCTTGAGAAACTCGTTCAATAAAAAGCCCAACAAACTAGTTTACAGGCCAGGCTTCACTTATTTTAATGGGCCCATTTTAATTTCCCGGCAGAAGCCCAACAAACACGTCGTAACTCTACAATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTACAGTGATGGTGGTAGAAGTGGAGGTGGGGATTTTGTGGCTGGTTTTCTTCTTGGGGGTGCTGTATTTGGAACCTTAGCTTATATTTTTGCTCCGCAGGTGATTGAATGTTTTGTTCTAAAGTTTCTTCTCCGGCAATAAAAATCATAATGTAATCATTTGGTTTCATATAACCATTGATCTGATTCAGCTAGGGTATAATTTAAATGTTCGCAGAAACATGTCTGTTTAGATGATTTCATGAAGCTAACAATGTCCTTTCAAGTCATTTTCAACTTTATATGCGAGATCTCGAGGCTGATTATTTCTTTGCCTCACATATGTTCCATTGTAGCGTTTGGTTACACAACTTTGTTTGAATTTCAGAAATGGAATGCGATGTGAGCTGCTGTTTGTTAGTTATAGGAAATTCACGTCCTCTGTGTGCAATACTCTGGCTTTTTCTTAATTGTCTTTGAGTGAGTCATATGGTTTCTCAGAGGCTTGAATATCTATTTATTGGCTTTCTGCTTATATGCACGTAATGCAGATCAGGAGATCTCTACTAAATGAAGACGAGTACGGTTTTAGGAGGGCTAAGCGTCCAATCTACTACGACGAAGGTCTAGAGGTAACTATAAATTATAAGTCCTCGAGTTTATTTCATCTCTAAATTTCCAAAGGGATTCAGTTACATCTATACATTATTTAGTTGATAGTCTGTAAAAGAATAGGATGTAGTGCTATTTTATATTGTTCAATGGCTTGCTTCTTGTTAAAGCGTGTCAAATTATCCCATGTTTGTCAAATAGGAACAAGCATAGTTTATAGGTTAATTAAGTGTCTAACAGCAACTATCATGGGTTGGCCTAGTGGTAAAAAAAGGAGACAAAGTCTCAATAATTGGCTAAGAGGTCATGGGTTCAATAATCCATGGTGGCCACTTACCTAAGAATTAATTTCCTACGAGCGGGTTGCGCGTTAGCTGGCCTGGACACTCACGGATATAAAAAAAAATTAAGTGTCTAACAACAAAAACTATAAAGAAACAGTATCACAATTTAAAATGATTTCTATAATTTAACCCCAAAAAAAGAGAGTAAAAGTTCATTTTTGTGAAATGCAGAAAACCAGACAGACGTTGAATGCAAAAATAAGCCAATTGAATTCTGCGATTGATAACGTATCTTCACGTCTGAGAGGTGGCAACAATACTCCGGCTGTGCCAGTTGAAGCTGATCCTGAGATAGAAGCTACCATGTAAATTCAATTTCGACATAATTGAAAAGGTTTGAAATTTTCACATCTTAGAGACCATATATTCATGTGACACATATGCCACCATTTTTAATTGAAAGTTTTTTGGATTGATCAAGATTAAAGTGGATTGTTTGTTACGGTTAAATTAGAATTGTTGGAAATATTGGAATACAAGCACTTAGTTTAGGGCTAATAATTAAGTGTATAACAGCATTTTTAAAGAATTCAAATACAGGAAAATCTACCAATGATAGATTCTATTGTTGAATTGCAAATACAGGAAAATCTACCAATGATAGATTCTATTGTTAATAGATTCCTATTAGTAATAGTATCATTGATAGACTCTGAGAATTGGATCTT

mRNA sequence

CTTCGGTCAACTTGGGGGTTCGCTTCCTGATCGGGGAAGCTACTCGATTTTGGGGAGATTTTTGCTAATACTACCAAGAGATATATGGTTCGAATTTTCGATGTTGATTTGAAAGAGTGATAAATGTATAATTAATAATCTAGTTATATAATACAAAAATGGTAATAGAGGTGAACAAAAGCCGGCTATCTTCAACACTCTCTTGTTCGTTCTGCCTCGTTTCTCTCTCTCTCCAATTCTCTCTAGATCTCTCCTCTGAGTCCTCTCCTTCCACATGGCCGCCTGCTTTTCTCCGTCACTCTCCGTATCTGGCATGCCCTTACGTTGATGGATTTTGGATTAACATTGAGTTCGATGTAGATTGCTGTTCTGGAAGGGGACTGGTCAAGGCCTCAGATCTCTCCTCAAAGTCCATTTCCTTTGGGCAAGCACCAAAAGTCGCCATTCAGAGGAAGTGCTCGAGAACCAACCACAAGTTATCAGTCCGTGCTGAGTACAATGATGGTGGTAGAAGTGGAGGTGGGGATTTTGTGGCTGGTTTTCTTCTTGGGGGTGCTGTATTTGGAACCTTAGCTTATATTTTTGCTCCGCAGATCAGGAGATCTCTACTAAATGAAGACGAGTACGGTTTTAGGAGGGCTAAGCGTCCAATCTACTACGACGAAGGTCTAGAGAAAACCAGACAGACGTTGAATGCAAAAATAAGCCAATTGAATTCTGCGATTGATAACGTATCTTCACGTCTGAGAGGTGGCAACAATACTCCGGCTGTGCCAGTTGAAGCTGATCCTGAGATAGAAGCTACCATGTAAATTCAATTTCGACATAATTGAAAAGGTTTGAAATTTTCACATCTTAGAGACCATATATTCATGTGACACATATGCCACCATTTTTAATTGAAAGTTTTTTGGATTGATCAAGATTAAAGTGGATTGTTTGTTACGGTTAAATTAGAATTGTTGGAAATATTGGAATACAAGCACTTAGTTTAGGGCTAATAATTAAGTGTATAACAGCATTTTTAAAGAATTCAAATACAGGAAAATCTACCAATGATAGATTCTATTGTTGAATTGCAAATACAGGAAAATCTACCAATGATAGATTCTATTGTTAATAGATTCCTATTAGTAATAGTATCATTGATAGACTCTGAGAATTGGATCTT

Coding sequence (CDS)

ATGGTAATAGAGGTGAACAAAAGCCGGCTATCTTCAACACTCTCTTGTTCGTTCTGCCTCGTTTCTCTCTCTCTCCAATTCTCTCTAGATCTCTCCTCTGAGTCCTCTCCTTCCACATGGCCGCCTGCTTTTCTCCGTCACTCTCCGTATCTGGCATGCCCTTACGTTGATGGATTTTGGATTAACATTGAGTTCGATGTAGATTGCTGTTCTGGAAGGGGACTGGTCAAGGCCTCAGATCTCTCCTCAAAGTCCATTTCCTTTGGGCAAGCACCAAAAGTCGCCATTCAGAGGAAGTGCTCGAGAACCAACCACAAGTTATCAGTCCGTGCTGAGTACAATGATGGTGGTAGAAGTGGAGGTGGGGATTTTGTGGCTGGTTTTCTTCTTGGGGGTGCTGTATTTGGAACCTTAGCTTATATTTTTGCTCCGCAGATCAGGAGATCTCTACTAAATGAAGACGAGTACGGTTTTAGGAGGGCTAAGCGTCCAATCTACTACGACGAAGGTCTAGAGAAAACCAGACAGACGTTGAATGCAAAAATAAGCCAATTGAATTCTGCGATTGATAACGTATCTTCACGTCTGAGAGGTGGCAACAATACTCCGGCTGTGCCAGTTGAAGCTGATCCTGAGATAGAAGCTACCATGTAA

Protein sequence

MVIEVNKSRLSSTLSCSFCLVSLSLQFSLDLSSESSPSTWPPAFLRHSPYLACPYVDGFWINIEFDVDCCSGRGLVKASDLSSKSISFGQAPKVAIQRKCSRTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
Homology
[Close]
BLAST of Lsi10G002870 vs. ExPASy TrEMBL
Match: A0A6J1JGK4 (uncharacterized protein LOC111484314 OS=Cucurbita maxima OX=3661 GN=LOC111484314 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.1e-68
Identity = 134/144 (93.06%), Postives = 141/144 (97.92%), Query Frame = 0 

Query: 74  GLVKASDLSSKSISFGQAPKVAIQRKCSRTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGA 133
           GL+KASDLSSKSISFGQAPK+AIQRKCSR+NHKLSVRAEYNDGGRSGGG+FVAGFLLGGA
Sbjct: 14  GLIKASDLSSKSISFGQAPKLAIQRKCSRSNHKLSVRAEYNDGGRSGGGEFVAGFLLGGA 73

Query: 134 VFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVS 193
           VFGTLAYIFAPQIRRS+LNEDEYGFRRA+RPIYYD+GLEKTRQTLN KI QLNSAIDNVS
Sbjct: 74  VFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVS 133

Query: 194 SRLRGGNNTPAVPVEADPEIEATM 218
           SRLRGGN TPAVPVEADPEIEATM
Sbjct: 134 SRLRGGNKTPAVPVEADPEIEATM 157

[Close]
BLAST of Lsi10G002870 vs. ExPASy TrEMBL
Match: A0A6J1FVP6 (uncharacterized protein LOC111448897 OS=Cucurbita moschata OX=3662 GN=LOC111448897 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 3.2e-68
Identity = 133/144 (92.36%), Postives = 141/144 (97.92%), Query Frame = 0 

Query: 74  GLVKASDLSSKSISFGQAPKVAIQRKCSRTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGA 133
           GL+KASDLSSKSISFGQAPK+AIQRKCSRT+HKLSVRAEYNDGGR+GGG+FVAGFLLGGA
Sbjct: 14  GLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGA 73

Query: 134 VFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVS 193
           VFGTLAYIFAPQIRRS+LNEDEYGFRRA+RPIYYD+GLEKTRQTLN KI QLNSAIDNVS
Sbjct: 74  VFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVS 133

Query: 194 SRLRGGNNTPAVPVEADPEIEATM 218
           SRLRGGN TPAVPVEADPEIEATM
Sbjct: 134 SRLRGGNKTPAVPVEADPEIEATM 157

[Close]
BLAST of Lsi10G002870 vs. ExPASy TrEMBL
Match: A0A5D3CQ66 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00050 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.2e-67
Identity = 133/145 (91.72%), Postives = 143/145 (98.62%), Query Frame = 0 

Query: 74  GLVKASDLSSKSISFGQAPKVAIQRKCSRTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGA 133
           GL+KASDLSSKS+SFGQ PK+AI+RKCS+TNHKLSVRAEYNDGGRSGGGDFVAGFLLGGA
Sbjct: 14  GLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGA 73

Query: 134 VFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVS 193
           VFGTLAY+FAPQIRRS+LNEDE+GFRRAKRP+YYDEGLEKTRQTLNAKISQLNSAIDNVS
Sbjct: 74  VFGTLAYLFAPQIRRSILNEDEHGFRRAKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVS 133

Query: 194 SRLRGGNNTPAVPV-EADPEIEATM 218
           SRLRGGNNTPAVPV EA+PEIEATM
Sbjct: 134 SRLRGGNNTPAVPVEEAEPEIEATM 158

[Close]
BLAST of Lsi10G002870 vs. ExPASy TrEMBL
Match: A0A1S3C9M4 (uncharacterized protein LOC103498395 OS=Cucumis melo OX=3656 GN=LOC103498395 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.2e-67
Identity = 133/145 (91.72%), Postives = 143/145 (98.62%), Query Frame = 0 

Query: 74  GLVKASDLSSKSISFGQAPKVAIQRKCSRTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGA 133
           GL+KASDLSSKS+SFGQ PK+AI+RKCS+TNHKLSVRAEYNDGGRSGGGDFVAGFLLGGA
Sbjct: 14  GLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGA 73

Query: 134 VFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVS 193
           VFGTLAY+FAPQIRRS+LNEDE+GFRRAKRP+YYDEGLEKTRQTLNAKISQLNSAIDNVS
Sbjct: 74  VFGTLAYLFAPQIRRSILNEDEHGFRRAKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVS 133

Query: 194 SRLRGGNNTPAVPV-EADPEIEATM 218
           SRLRGGNNTPAVPV EA+PEIEATM
Sbjct: 134 SRLRGGNNTPAVPVEEAEPEIEATM 158

[Close]
BLAST of Lsi10G002870 vs. ExPASy TrEMBL
Match: A0A6J1D647 (uncharacterized protein LOC111017273 OS=Momordica charantia OX=3673 GN=LOC111017273 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 3.0e-66
Identity = 134/144 (93.06%), Postives = 138/144 (95.83%), Query Frame = 0 

Query: 74  GLVKASDLSSKSISFGQAPKVAIQRKCSRTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGA 133
           GL+KASDLSSKSI+FGQAPK+AIQ+KC RTN KLSVRAEYND GR GGGDFVAGFLLGGA
Sbjct: 14  GLIKASDLSSKSITFGQAPKLAIQKKCLRTNRKLSVRAEYND-GRGGGGDFVAGFLLGGA 73

Query: 134 VFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVS 193
           VFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKI QLNSAIDNVS
Sbjct: 74  VFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKIGQLNSAIDNVS 133

Query: 194 SRLRGGNNTPAVPVEADPEIEATM 218
           SRLRGGNNTPAVPVEADPE EATM
Sbjct: 134 SRLRGGNNTPAVPVEADPEKEATM 156

[Close]
BLAST of Lsi10G002870 vs. NCBI nr
Match: XP_038902580.1 (uncharacterized protein LOC120089235 [Benincasa hispida])

HSP 1 Score: 271.9 bits (694), Expect = 4.6e-69
Identity = 139/144 (96.53%), Postives = 141/144 (97.92%), Query Frame = 0 

Query: 74  GLVKASDLSSKSISFGQAPKVAIQRKCSRTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGA 133
           GL+KASDLSSKSISFGQAPK+AIQRK SRTN KLSVRAEYNDG RSGGGDFVAGFLLGGA
Sbjct: 14  GLIKASDLSSKSISFGQAPKLAIQRKSSRTNQKLSVRAEYNDGDRSGGGDFVAGFLLGGA 73

Query: 134 VFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVS 193
           VFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVS
Sbjct: 74  VFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVS 133

Query: 194 SRLRGGNNTPAVPVEADPEIEATM 218
           SRLRGGNNTPAVPVEADPEIEATM
Sbjct: 134 SRLRGGNNTPAVPVEADPEIEATM 157

[Close]
BLAST of Lsi10G002870 vs. NCBI nr
Match: XP_023512433.1 (uncharacterized protein LOC111777191 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 269.6 bits (688), Expect = 2.3e-68
Identity = 134/144 (93.06%), Postives = 140/144 (97.22%), Query Frame = 0 

Query: 74  GLVKASDLSSKSISFGQAPKVAIQRKCSRTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGA 133
           GL+KASDLSSKSISFGQ PK+AIQRKCSRTNHKLSVRAEYNDGGRSGGG+FVAGFLLGGA
Sbjct: 14  GLIKASDLSSKSISFGQTPKLAIQRKCSRTNHKLSVRAEYNDGGRSGGGEFVAGFLLGGA 73

Query: 134 VFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVS 193
           VFGTLAYIFAPQIRRS+LNEDEYGFRRA+RPIYYD+GLEKTRQTLN KI QLNSAIDNVS
Sbjct: 74  VFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVS 133

Query: 194 SRLRGGNNTPAVPVEADPEIEATM 218
           SRLRGGN TPAVPVEADPEIEATM
Sbjct: 134 SRLRGGNKTPAVPVEADPEIEATM 157

[Close]
BLAST of Lsi10G002870 vs. NCBI nr
Match: XP_022986629.1 (uncharacterized protein LOC111484314 [Cucurbita maxima])

HSP 1 Score: 269.6 bits (688), Expect = 2.3e-68
Identity = 134/144 (93.06%), Postives = 141/144 (97.92%), Query Frame = 0 

Query: 74  GLVKASDLSSKSISFGQAPKVAIQRKCSRTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGA 133
           GL+KASDLSSKSISFGQAPK+AIQRKCSR+NHKLSVRAEYNDGGRSGGG+FVAGFLLGGA
Sbjct: 14  GLIKASDLSSKSISFGQAPKLAIQRKCSRSNHKLSVRAEYNDGGRSGGGEFVAGFLLGGA 73

Query: 134 VFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVS 193
           VFGTLAYIFAPQIRRS+LNEDEYGFRRA+RPIYYD+GLEKTRQTLN KI QLNSAIDNVS
Sbjct: 74  VFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVS 133

Query: 194 SRLRGGNNTPAVPVEADPEIEATM 218
           SRLRGGN TPAVPVEADPEIEATM
Sbjct: 134 SRLRGGNKTPAVPVEADPEIEATM 157

[Close]
BLAST of Lsi10G002870 vs. NCBI nr
Match: KAG7010970.1 (hypothetical protein SDJN02_27768, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268.9 bits (686), Expect = 3.9e-68
Identity = 133/144 (92.36%), Postives = 141/144 (97.92%), Query Frame = 0 

Query: 74  GLVKASDLSSKSISFGQAPKVAIQRKCSRTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGA 133
           GL+KASDLSSKSISFGQAPK+AIQRKCSRTNHKLSVRAEYNDGGR+GGG+FVAGFLLGGA
Sbjct: 14  GLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNGGGEFVAGFLLGGA 73

Query: 134 VFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVS 193
           VFGTLAYIFAPQIRRS+LNEDEYGFRRA+RPIYYD+GLEKTRQTLN KI QLNSAIDNVS
Sbjct: 74  VFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVS 133

Query: 194 SRLRGGNNTPAVPVEADPEIEATM 218
           SRLRGGN TP+VPVEADPEIEATM
Sbjct: 134 SRLRGGNKTPSVPVEADPEIEATM 157

[Close]
BLAST of Lsi10G002870 vs. NCBI nr
Match: XP_022944447.1 (uncharacterized protein LOC111448897 [Cucurbita moschata])

HSP 1 Score: 268.1 bits (684), Expect = 6.7e-68
Identity = 133/144 (92.36%), Postives = 141/144 (97.92%), Query Frame = 0 

Query: 74  GLVKASDLSSKSISFGQAPKVAIQRKCSRTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGA 133
           GL+KASDLSSKSISFGQAPK+AIQRKCSRT+HKLSVRAEYNDGGR+GGG+FVAGFLLGGA
Sbjct: 14  GLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNGGGEFVAGFLLGGA 73

Query: 134 VFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVS 193
           VFGTLAYIFAPQIRRS+LNEDEYGFRRA+RPIYYD+GLEKTRQTLN KI QLNSAIDNVS
Sbjct: 74  VFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNEKIGQLNSAIDNVS 133

Query: 194 SRLRGGNNTPAVPVEADPEIEATM 218
           SRLRGGN TPAVPVEADPEIEATM
Sbjct: 134 SRLRGGNKTPAVPVEADPEIEATM 157

[Close]
BLAST of Lsi10G002870 vs. TAIR 10
Match: AT5G16660.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 165.6 bits (418), Expect = 4.4e-41
Identity = 98/148 (66.22%), Postives = 112/148 (75.68%), Query Frame = 0 

Query: 76  VKASDLS--SKSISFGQAPKVAIQRKCSRTNHKLSVRAEYNDGGRSG-GGDFVAGFLLGG 135
           VKA+ LS  +K  S  +   + I +K +RT  K SV A Y DG RSG  GDF+AGFLLGG
Sbjct: 21  VKANGLSTTTKLSSICKTSDLTIHKKSNRT-RKFSVSAGYRDGSRSGSSGDFIAGFLLGG 80

Query: 136 AVFGTLAYIFAPQIRRSLLN-EDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDN 195
           AVFG +AYIFAPQIRRS+LN EDEYGF + K+P YYDEGLEKTR+TLN KI QLNSAIDN
Sbjct: 81  AVFGAVAYIFAPQIRRSVLNEEDEYGFEKPKQPTYYDEGLEKTRETLNEKIGQLNSAIDN 140

Query: 196 VSSRLRG-GNNTPA--VPVEADPEIEAT 217
           VSSRLRG   NT +  VPVE DPE+EAT
Sbjct: 141 VSSRLRGREKNTSSLNVPVETDPEVEAT 167

[Close]
BLAST of Lsi10G002870 vs. TAIR 10
Match: AT5G16660.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 106 Blast hits to 106 proteins in 32 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 158.7 bits (400), Expect = 5.3e-39
Identity = 97/148 (65.54%), Postives = 111/148 (75.00%), Query Frame = 0 

Query: 76  VKASDLS--SKSISFGQAPKVAIQRKCSRTNHKLSVRAEYNDGGRSG-GGDFVAGFLLGG 135
           VKA+ LS  +K  S  +   + I +K +RT  K SV A   DG RSG  GDF+AGFLLGG
Sbjct: 21  VKANGLSTTTKLSSICKTSDLTIHKKSNRT-RKFSVSA--GDGSRSGSSGDFIAGFLLGG 80

Query: 136 AVFGTLAYIFAPQIRRSLLN-EDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDN 195
           AVFG +AYIFAPQIRRS+LN EDEYGF + K+P YYDEGLEKTR+TLN KI QLNSAIDN
Sbjct: 81  AVFGAVAYIFAPQIRRSVLNEEDEYGFEKPKQPTYYDEGLEKTRETLNEKIGQLNSAIDN 140

Query: 196 VSSRLRG-GNNTPA--VPVEADPEIEAT 217
           VSSRLRG   NT +  VPVE DPE+EAT
Sbjct: 141 VSSRLRGREKNTSSLNVPVETDPEVEAT 165

[Close]
BLAST of Lsi10G002870 vs. TAIR 10
Match: AT3G02900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast hits to 80 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 151.4 bits (381), Expect = 8.5e-37
Identity = 81/131 (61.83%), Postives = 100/131 (76.34%), Query Frame = 0 

Query: 94  VAIQRKCSRTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLN 153
           + +Q K +R +HKLSV A Y  G + GG  DFV GFLLG AVFGTLAYIFAPQIRRS+L+
Sbjct: 32  LTVQTKSNR-SHKLSVSAGYRGGSKGGGSSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLS 91

Query: 154 EDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGG-------NNTPAV 213
           E+EYGF++ ++P+YYDEGLE+ R+ LN KI QLNSAID VSSRL+GG        ++P+V
Sbjct: 92  ENEYGFKKPEQPMYYDEGLEERREILNEKIGQLNSAIDKVSSRLKGGRSGSSKNTSSPSV 151

Query: 214 PVEADPEIEAT 217
           PVE D E EAT
Sbjct: 152 PVETDAEAEAT 161

[Close]
BLAST of Lsi10G002870 vs. TAIR 10
Match: AT3G02900.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1). )

HSP 1 Score: 151.4 bits (381), Expect = 8.5e-37
Identity = 81/131 (61.83%), Postives = 100/131 (76.34%), Query Frame = 0 

Query: 94  VAIQRKCSRTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLN 153
           + +Q K +R +HKLSV A Y  G + GG  DFV GFLLG AVFGTLAYIFAPQIRRS+L+
Sbjct: 31  LTVQTKSNR-SHKLSVSAGYRGGSKGGGSSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLS 90

Query: 154 EDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGG-------NNTPAV 213
           E+EYGF++ ++P+YYDEGLE+ R+ LN KI QLNSAID VSSRL+GG        ++P+V
Sbjct: 91  ENEYGFKKPEQPMYYDEGLEERREILNEKIGQLNSAIDKVSSRLKGGRSGSSKNTSSPSV 150

Query: 214 PVEADPEIEAT 217
           PVE D E EAT
Sbjct: 151 PVETDAEAEAT 160

[Close]
BLAST of Lsi10G002870 vs. TAIR 10
Match: AT1G42960.1 (expressed protein localized to the inner membrane of the chloroplast. )

HSP 1 Score: 86.7 bits (213), Expect = 2.6e-17
Identity = 56/135 (41.48%), Postives = 76/135 (56.30%), Query Frame = 0 

Query: 85  SISFGQAPKVAIQRKCSRTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYIFA 144
           S+SFG      +     RT   L++++ Y D   SG  G FV GF+LGG + G L  ++A
Sbjct: 34  SVSFGLNHSNKLHISAPRTKRILTIQSAYRDDDGSGSTGLFVGGFILGGLIVGALGCVYA 93

Query: 145 PQIRRSLLNEDEYGFRRAKRPIYYDE--GLEKTRQTLNAKISQLNSAIDNVSSRLRGGNN 204
           PQI +++   D     R      YDE   LEKTR+ L  KI+QLNSAID+VSS+L+   +
Sbjct: 94  PQISKAIAGADRKDLMRKLPKFIYDEEKALEKTRKVLAEKIAQLNSAIDDVSSQLK-SED 153

Query: 205 TPAVPVEADPEIEAT 217
           TP     +  EIEAT
Sbjct: 154 TPNGAALSTDEIEAT 167

The following BLAST results are available for this feature:
BLAST of Lsi10G002870 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi10G002870 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JGK41.1e-6893.06uncharacterized protein LOC111484314 OS=Cucurbita maxima OX=3661 GN=LOC111484314... [more]
A0A6J1FVP63.2e-6892.36uncharacterized protein LOC111448897 OS=Cucurbita moschata OX=3662 GN=LOC1114488... [more]
A0A5D3CQ661.2e-6791.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3C9M41.2e-6791.72uncharacterized protein LOC103498395 OS=Cucumis melo OX=3656 GN=LOC103498395 PE=... [more]
A0A6J1D6473.0e-6693.06uncharacterized protein LOC111017273 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
BLAST of Lsi10G002870 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038902580.14.6e-6996.53uncharacterized protein LOC120089235 [Benincasa hispida][more]
XP_023512433.12.3e-6893.06uncharacterized protein LOC111777191 [Cucurbita pepo subsp. pepo][more]
XP_022986629.12.3e-6893.06uncharacterized protein LOC111484314 [Cucurbita maxima][more]
KAG7010970.13.9e-6892.36hypothetical protein SDJN02_27768, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022944447.16.7e-6892.36uncharacterized protein LOC111448897 [Cucurbita moschata][more]
BLAST of Lsi10G002870 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G16660.14.4e-4166.22unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G16660.25.3e-3965.54unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G02900.18.5e-3761.83unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G02900.28.5e-3761.83unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G42960.12.6e-1741.48expressed protein localized to the inner membrane of the chloroplast. [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 175..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..217
NoneNo IPR availablePANTHERPTHR34048LOW-DENSITY RECEPTOR-LIKE PROTEINcoord: 71..217
NoneNo IPR availablePANTHERPTHR34048:SF3LOW-DENSITY RECEPTOR-LIKE PROTEINcoord: 71..217

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G002870.1Lsi10G002870.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0016021 integral component of membrane