Lsi10G001540 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAAGCCCAATATCTAAAAGCCCATATATAGTAGGAATCCAGGTGGAGTCGCCGTTGCCGGGTTCACCACGTCCTGTTTCTTCCCCCGCGGGGCGACGGGGAAAAATAGGGGAAACTAAAAAATCGGGGCATTAATAATTCCATCACTTGTATCCACCATTGACGCCATCGCTCGCTTCCTTCTGCTGTTTTTCCAAATTCTTCTACTGCCCAACCAACTTTGACGCCCCAATATAATAATACCCGAGCTCTTCCAGTTCTCCCATGGCCGAAACTTCTTCCAAAGACGACCTACTTGAGCTCATCAAGCGCTTTGGGGCTTATCTCACTCTCAAGATGTCCAATTTCTTCCCGATCTCTCTCCAGAATCTGGTCCTAATTTCTTTCCCTGTTTTTTCTTCTTCTGTTCGTTTTTCGATGGATCTGACCGCCTTTAGCTTTCTGCTTCTGGGTTTTCTTTTTTACGCTGAATATTTGATAGATTTGATACCCCAATTCCTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTGGGTTGTGTATTCTGTTTTTTGCTGAACCCTTTGGTTTGAGGTGTGGACTATTTCCTATAAATTCCATGCTTCAATTACATAATAGTTTCTGTTGTTCGATTTTCATTATTGTAGTCCATAATTCAACAACACGCTGCCAAAATGATGAGAAAACTTTTTTTCCCCTTGAATTGGGCCTGTGTGATACTATTAAACCTTGCAAAGCTGTTGTGTGCGTTACCGAAGTGATTACTATTCCTTTTATTCTTCAGTACTTGCGCTTCGAAGATGGTATATTACTGTCATATTAGGCCCCGTGCCAATTTGCAATTCTTTTAATTGTTACTCCCAAATCTTTCTCCCACAAAGATATGGTCAGCAATGAAGTGTTGAGTCGTTATGTAGAGAAAGAAGTAGAAAGGAAAAAATGTCCAAGATTCTTTTGATCTTCTTAATGGCCTCTAGTTTTTGGATCTTTTAGGTATTGAGATACGAAGCTTCGTGTCAGGAAACTAGATGTTCAGCTTCATTATTTTCTTTTTTCATTTGGGTGTTCAAAAAATCCTAAGAATAGATCAATGAAACGTCTGAGCCAAATCGGTCATTTTGGTGGTCTAGATTGTTTCAAATATTTATGGTCCTTTTCATTTGGGTGTTTGAAAATTGCTTCAGTTTTTGTGCCTTTTTGGTCTGTTCGGTTCAAATGTAAATAAAAATCAATAGCTCAATTCACTTTCTGTTTTGGTTTAAATAACTTGAATACTTTTTATGCTGACGGCTTCTAATTTGTCTGGTAGAACATTATGTTGTTTCTCCTATGTTACCAATCAACAAACAAGGGGAAAAGGCAATATGGTGTCTAACTAAATCTTTGAAATTTTATCAGGATTCACGATCTGTTGGGGCTATTGCTGGATTTGCAGTTGCAATAATTTTCACATGGAGACTGATGAGATCTTCTAATGGACATCAGAGACGACAACCAAGTAGTTCTACTTCTAGTGTTGGGTTAAATTCAAATGCACAATTGATAACTTCCGGAGTTTGTTCATCTTCAGAGGATTTAAGAGCACACAATGTTGTTGATGACTTCTTCCAGCCAGTCAAGGTCAGAGCTCAAATTATTGCCTATATCTTGTCCTGGCTTTTCAATTTTATTCCATTCACATGACACACTTTTAAGATTTTCCACTCTTACTTTTTCCTTGTAGCCAACTCTGGGTCAGATTGTGAGGCAAAAATTGAGTGAAGGAAGAAAGGTAACCAATATCTCAACCCTTGTTGTCTATCTTTATCAATATATTTTGGTGAAATATCAATATATGACATTGTATGAGGTAAGTGATATAAGGTAAGAAAGAGTCCAAGTTTTGGTACTGAAAATGTGTTATGCTTAGGTTACATGTCGTTTACTTGGAATAATTCTAGAGGAAAGCAGTCCGGAGGATCTGCAGGTATGTAGCGTTTTCCTCTCAACAAATTTTGTGCTTGAAACTGCTTTTGGGAATGTCTAATTTGGTTTCCTTTGTTTTGCATCAGAAACAAACCACTGTGAGGTCCTCGGTATTGGAAGTACTGTTGGAGATAACGAAATATTGTGATCTTTATCTCATGGAAACGGTGCTGGATGATGAGAGCGAAGTGAGTGCGATGCTTTATGGAATTTTTTTATTGGTCCTACTTAGTATCTTGATAAATTTAAATATATGGTTGCTGATGTGTGATTGGTGTAGTTCTAATGACGGTAGTGCCTCCTTAAAAAAGGGGTGTCACCTTGAAGTTGAAATCTCTCCCCATACTTGTTTACTTTACTGCAAGAATATTTATAGGATGTCAGGTTATTTTTTATCCCTCACAGGCTCGAAAATCTATCAAACTGGCCAAACTGCGCAATCAACAGTTTGCTTGCAGTGTCAGGTCTTGCATGTCCATGTTTCCTCAGGAATTTTGGGTGGTTCTATATTCTTCTATCCTCCAGTCGTAAGAGGAGTACCTGGACTCAATTTGTCAATTTTAAGTTTAAAGTCTCAATTTCTTCCAAATAGACCCTAAACTTGAACTAGTGGAGCAATTAATACTGCTTCAAAACTAAACTCAAAAGAAGAAAAAAGAAAACTTTTTAGTTTGACTTAATTGAGGGTGCTAAATGTTGATTTATTGAAGTTAAGGGGTTTGGCTGGATGCAATTGATAGGAGAGCGTCAAAATCTTGAAAGCTCTATATCATATGGCAAAAAAACTAAAAATTTGATCGAAGAAGGGCCGTCATCAACTTGATTCTGCATATTGACTTCCACCTTGATTCTTTTTTTGAAATGGGGTGTTAGGGACCTAGTTTTTGGGTCATCTTTCGTCAGTAGTGATCTTCATGAAGCTCGGCCTTTTTCCTTTTAGATGTGCTTCATCATTGTGTCTCCATGCTGCATTTGTATTGGGGCCCTCTGCTTTTTTGTTTTTATCCAACACATTTGGTTGTACATCTTCTTTTCATCCTTTTTGGTTGTAATCTTTCCTTCTCGTTTGGGCCTCTTCTGTATTTTTTGGATGATTTCATTCATCGATGAAGTGTTTCTAAAAAAAAAAAAAAAAAAAAAAAAAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAGACCGGATGCAATTGATAGTATAAGTTTAACATTGTCAAACTGAATGGGGGAAAATGATTTCCTCTTATTCTTTTAGATGTACTCTTTTTAAAATATCATAGAAACCTGTTTTCTTATAACTGATTGGTGCCTGATACAATGTATCAATATTTTTTGTTGTTGTTTTTCTTCTTGTTGATCTCACATGCTATATGTTATTCGTCTTTCTAATAAAAGACATTATAAACTATTATGCAGAAAAGAGTTCTTTCAGCACTCGAAGATGCAGGAGTTTTCACATCTGGTGGTTTGGTCAAAGACAAGGTACCTAAGATGTTGAATCTCGGATTGTTTTGATTTTGACTGTATTGAAACAATTCTGATGATTTTAGTTTTTTTGTCTCTGAAGTACTGAAAGTACAAAGTTTAGGCACACTTTAGTCATTAAGTGGGTGTCTGGGACTGAATTGGTTATTATAGTCAGTGGCTATTATAGTCTATGAGTTATGATAGTTTGTGACTATACAAAGAGGGATTTGAAATAGTAACATTATAGTTAATTGTGGATTATAATAGTTAGAGCTCCAAACATGGAGTAGGCTATAATAGTCTACTTCACCCACTTAAAGTCGAGGGCCCAAACAGCCCCTAAGTTATTTTCTGGGTTTCTAAGAAAGATATAACGGAGAGTAGCTGGAGGTAGGAAATCTGTTTAATATTTTTCATGTTCCAAGTTTCCAAACCTTAAACATGTAACAAACGGCAGCTTATGGTATCTCTGACTCCCTTAACTGGAACTTCTCTGAAAAGTTGCTGACATCGTAATTGCACAAGTTTTGGTTGAAGCAAATAATCTCTTGAATTGTTTGGTGTTGGCCTGGAGAAAAATAGGGACGGCCACATTTGCCAACCTGCTTTTCTTGTAATTAACTGAGGATTATTTGTAGGTTCTTTTCTGTAGCACGGAGAACGGGCGAACATCTTTCGTGCGTCAACTGGAACCCGATTGGCATATAGATTCCAATCCTGAAATCATTACTCAGTTAGCTGTAAGTTAATCAACCCATTAGCTTGGCAAGTTTATTGTTCTGTAACATCTGTAAATGCATGGTGATTACTGATACTTTTTCTATAACCATCATCAGAGGTTCATCAAATATCAACTTCATGTAGCTCCAATCCGACATGAACGGACCGCTTCTAACGTTTTCAGCTCTCCATCCTTGGAACAGTTCTTTGGAAACATTTAACTTGAAACCAGTTCAAGAATGGAATGAATTTTCAAATATATTTTTTTTCCCATTTTATTTGGGCCTTGTTGGTTGCAAGTGCAATGGTTCTCTTTGGGAACTAAGCAAAGAGAAAAGATAGATGTATCAGGTTTTTCTTTTTTCTTTACGTTTCTGCAAAGATCTTTTTTTTGGGTTGATCTTGTGTTGTCTTTGACATAGTTACTTCATGCCCCACTAAAAGCTCCTAATTTAGCTGATGTATGTAATTTATATATATTTATTAGATCATCTCAGCCAGGATAAATACCATTTGGGTCACCAGTTTTCGGTGTCACTTTTGTTGGACTAATCTTCAAAAGTGTTTGAAATCAATGAATGAAAATGGATGCACTGTATGTACA GGAAGCCCAATATCTAAAAGCCCATATATAGTAGGAATCCAGGTGGAGTCGCCGTTGCCGGGTTCACCACGTCCTGTTTCTTCCCCCGCGGGGCGACGGGGAAAAATAGGGGAAACTAAAAAATCGGGGCATTAATAATTCCATCACTTGTATCCACCATTGACGCCATCGCTCGCTTCCTTCTGCTGTTTTTCCAAATTCTTCTACTGCCCAACCAACTTTGACGCCCCAATATAATAATACCCGAGCTCTTCCAGTTCTCCCATGGCCGAAACTTCTTCCAAAGACGACCTACTTGAGCTCATCAAGCGCTTTGGGGCTTATCTCACTCTCAAGATGTCCAATTTCTTCCCGATCTCTCTCCAGAATCTGGATTCACGATCTGTTGGGGCTATTGCTGGATTTGCAGTTGCAATAATTTTCACATGGAGACTGATGAGATCTTCTAATGGACATCAGAGACGACAACCAAGTAGTTCTACTTCTAGTGTTGGGTTAAATTCAAATGCACAATTGATAACTTCCGGAGTTTGTTCATCTTCAGAGGATTTAAGAGCACACAATGTTGTTGATGACTTCTTCCAGCCAGTCAAGCCAACTCTGGGTCAGATTGTGAGGCAAAAATTGAGTGAAGGAAGAAAGGTTACATGTCGTTTACTTGGAATAATTCTAGAGGAAAGCAGTCCGGAGGATCTGCAGAAACAAACCACTGTGAGGTCCTCGGTATTGGAAGTACTGTTGGAGATAACGAAATATTGTGATCTTTATCTCATGGAAACGGTGCTGGATGATGAGAGCGAAAAAAGAGTTCTTTCAGCACTCGAAGATGCAGGAGTTTTCACATCTGGTGGTTTGGTCAAAGACAAGGTTCTTTTCTGTAGCACGGAGAACGGGCGAACATCTTTCGTGCGTCAACTGGAACCCGATTGGCATATAGATTCCAATCCTGAAATCATTACTCAGTTAGCTAGGTTCATCAAATATCAACTTCATGTAGCTCCAATCCGACATGAACGGACCGCTTCTAACGTTTTCAGCTCTCCATCCTTGGAACAGTTCTTTGGAAACATTTAACTTGAAACCAGTTCAAGAATGGAATGAATTTTCAAATATATTTTTTTTCCCATTTTATTTGGGCCTTGTTGGTTGCAAGTGCAATGGTTCTCTTTGGGAACTAAGCAAAGAGAAAAGATAGATGTATCAGGTTTTTCTTTTTTCTTTACGTTTCTGCAAAGATCTTTTTTTTGGGTTGATCTTGTGTTGTCTTTGACATAGTTACTTCATGCCCCACTAAAAGCTCCTAATTTAGCTGATGTATGTAATTTATATATATTTATTAGATCATCTCAGCCAGGATAAATACCATTTGGGTCACCAGTTTTCGGTGTCACTTTTGTTGGACTAATCTTCAAAAGTGTTTGAAATCAATGAATGAAAATGGATGCACTGTATGTACA ATGGCCGAAACTTCTTCCAAAGACGACCTACTTGAGCTCATCAAGCGCTTTGGGGCTTATCTCACTCTCAAGATGTCCAATTTCTTCCCGATCTCTCTCCAGAATCTGGATTCACGATCTGTTGGGGCTATTGCTGGATTTGCAGTTGCAATAATTTTCACATGGAGACTGATGAGATCTTCTAATGGACATCAGAGACGACAACCAAGTAGTTCTACTTCTAGTGTTGGGTTAAATTCAAATGCACAATTGATAACTTCCGGAGTTTGTTCATCTTCAGAGGATTTAAGAGCACACAATGTTGTTGATGACTTCTTCCAGCCAGTCAAGCCAACTCTGGGTCAGATTGTGAGGCAAAAATTGAGTGAAGGAAGAAAGGTTACATGTCGTTTACTTGGAATAATTCTAGAGGAAAGCAGTCCGGAGGATCTGCAGAAACAAACCACTGTGAGGTCCTCGGTATTGGAAGTACTGTTGGAGATAACGAAATATTGTGATCTTTATCTCATGGAAACGGTGCTGGATGATGAGAGCGAAAAAAGAGTTCTTTCAGCACTCGAAGATGCAGGAGTTTTCACATCTGGTGGTTTGGTCAAAGACAAGGTTCTTTTCTGTAGCACGGAGAACGGGCGAACATCTTTCGTGCGTCAACTGGAACCCGATTGGCATATAGATTCCAATCCTGAAATCATTACTCAGTTAGCTAGGTTCATCAAATATCAACTTCATGTAGCTCCAATCCGACATGAACGGACCGCTTCTAACGTTTTCAGCTCTCCATCCTTGGAACAGTTCTTTGGAAACATTTAA MAETSSKDDLLELIKRFGAYLTLKMSNFFPISLQNLDSRSVGAIAGFAVAIIFTWRLMRSSNGHQRRQPSSSTSSVGLNSNAQLITSGVCSSSEDLRAHNVVDDFFQPVKPTLGQIVRQKLSEGRKVTCRLLGIILEESSPEDLQKQTTVRSSVLEVLLEITKYCDLYLMETVLDDESEKRVLSALEDAGVFTSGGLVKDKVLFCSTENGRTSFVRQLEPDWHIDSNPEIITQLARFIKYQLHVAPIRHERTASNVFSSPSLEQFFGNI Homology
BLAST of Lsi10G001540 vs. ExPASy Swiss-Prot
Match: Q9LSX7 (Peroxisome biogenesis protein 22 OS=Arabidopsis thaliana OX=3702 GN=PEX22 PE=1 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 4.7e-98 Identity = 192/283 (67.84%), Postives = 225/283 (79.51%), Query Frame = 0
BLAST of Lsi10G001540 vs. ExPASy TrEMBL
Match: A0A5A7TGS1 (Peroxisome biogenesis protein 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold266G00120 PE=4 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 1.2e-136 Identity = 256/276 (92.75%), Postives = 263/276 (95.29%), Query Frame = 0
BLAST of Lsi10G001540 vs. ExPASy TrEMBL
Match: A0A5D3BET8 (Peroxisome biogenesis protein 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00260 PE=4 SV=1) HSP 1 Score: 494.2 bits (1271), Expect = 3.5e-136 Identity = 255/276 (92.39%), Postives = 263/276 (95.29%), Query Frame = 0
BLAST of Lsi10G001540 vs. ExPASy TrEMBL
Match: A0A1S3C2J1 (peroxisome biogenesis protein 22 OS=Cucumis melo OX=3656 GN=LOC103495938 PE=4 SV=1) HSP 1 Score: 494.2 bits (1271), Expect = 3.5e-136 Identity = 255/276 (92.39%), Postives = 263/276 (95.29%), Query Frame = 0
BLAST of Lsi10G001540 vs. ExPASy TrEMBL
Match: A0A0A0LN81 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G422040 PE=4 SV=1) HSP 1 Score: 488.0 bits (1255), Expect = 2.5e-134 Identity = 250/276 (90.58%), Postives = 260/276 (94.20%), Query Frame = 0
BLAST of Lsi10G001540 vs. ExPASy TrEMBL
Match: A0A6J1JAW0 (peroxisome biogenesis protein 22-like OS=Cucurbita maxima OX=3661 GN=LOC111484124 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 2.7e-133 Identity = 250/276 (90.58%), Postives = 259/276 (93.84%), Query Frame = 0
BLAST of Lsi10G001540 vs. NCBI nr
Match: KAA0042433.1 (peroxisome biogenesis protein 22 [Cucumis melo var. makuwa]) HSP 1 Score: 495.7 bits (1275), Expect = 2.5e-136 Identity = 256/276 (92.75%), Postives = 263/276 (95.29%), Query Frame = 0
BLAST of Lsi10G001540 vs. NCBI nr
Match: XP_038902771.1 (peroxisome biogenesis protein 22 [Benincasa hispida]) HSP 1 Score: 495.4 bits (1274), Expect = 3.2e-136 Identity = 255/276 (92.39%), Postives = 262/276 (94.93%), Query Frame = 0
BLAST of Lsi10G001540 vs. NCBI nr
Match: XP_008455836.1 (PREDICTED: peroxisome biogenesis protein 22 [Cucumis melo] >TYJ98310.1 peroxisome biogenesis protein 22 [Cucumis melo var. makuwa]) HSP 1 Score: 494.2 bits (1271), Expect = 7.1e-136 Identity = 255/276 (92.39%), Postives = 263/276 (95.29%), Query Frame = 0
BLAST of Lsi10G001540 vs. NCBI nr
Match: XP_004151875.1 (peroxisome biogenesis protein 22 [Cucumis sativus] >KGN63273.1 hypothetical protein Csa_022570 [Cucumis sativus]) HSP 1 Score: 488.0 bits (1255), Expect = 5.1e-134 Identity = 250/276 (90.58%), Postives = 260/276 (94.20%), Query Frame = 0
BLAST of Lsi10G001540 vs. NCBI nr
Match: XP_022986361.1 (peroxisome biogenesis protein 22-like [Cucurbita maxima]) HSP 1 Score: 484.6 bits (1246), Expect = 5.7e-133 Identity = 250/276 (90.58%), Postives = 259/276 (93.84%), Query Frame = 0
BLAST of Lsi10G001540 vs. TAIR 10
Match: AT3G21865.1 (peroxin 22 ) HSP 1 Score: 359.0 bits (920), Expect = 3.3e-99 Identity = 192/283 (67.84%), Postives = 225/283 (79.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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