Homology
BLAST of Lsi10G000520 vs. ExPASy Swiss-Prot
Match:
Q9SJ41 (Zinc finger CCCH domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=At2g05160 PE=2 SV=1)
HSP 1 Score: 337.8 bits (865), Expect = 2.0e-91
Identity = 210/432 (48.61%), Postives = 271/432 (62.73%), Query Frame = 0
Query: 21 MEFPESTEFVFDRIFKLEPEYASIILEYLIL--NINEDDMIRLALSSDTFIQCLIIKVKS 80
M F ES V RI +LEPE A+ I YL+L DMIRLA D+ + +I VK
Sbjct: 1 MNFTESMNVVHARIQQLEPENAAKIFGYLLLMQENGNRDMIRLAFCPDSVMCSVINCVKY 60
Query: 81 DLGITQMAAPVPAS----APTLSSVSISDPNLQFSSYTRAPSSRQLLPHST--FPLQNLM 140
+L P S P S + S P S P +ST LQN +
Sbjct: 61 ELARNSHHYHSPPSDHIPTPKFGSFTGSSP---LSVSVSPPMKTGFWENSTEMDTLQNNL 120
Query: 141 QYLSLDDQLESVNPVGPDHSTHCSGFYS-EQGMVGVRSNRRC----GLPVKVCHYFNKGY 200
Q+L+ +D L S P+ S +GF+S E+ + +R++RR PVK+CHYFNKG+
Sbjct: 121 QFLNFEDPLTS-----PEFS---NGFFSQERQCLPLRTSRRSPSLPEFPVKICHYFNKGF 180
Query: 201 CKHGSKCRYFHGQVTGE-----------SGNEEQQIVIRSRNLENLEMEIVELLKSRRGI 260
CKHG+ CRYFHGQ+ E + +++ V+ +LE LE EI+ELLK RRG
Sbjct: 181 CKHGNNCRYFHGQIIPERESFAQMFNPNNNLSDEEHVVSPVSLEKLEGEIIELLKLRRGA 240
Query: 261 PISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASL-NSICVLDRPHGQHS 320
PISIASLPM+YYE+YG++LQA+GYLTESQR+GKAG+SLTKLLA L N+I ++DRPHGQHS
Sbjct: 241 PISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNTIRLVDRPHGQHS 300
Query: 321 VILAEDARKYIEFSEN---------SARQIYLTFPAESTFTEQDVSNYFSKYGPVQDVRI 380
VILAEDA K++E++ +RQIYLTFPAES+FTE DVS YF+ YG V+DVRI
Sbjct: 301 VILAEDASKFVEYTGERNEHGAILAGSRQIYLTFPAESSFTEHDVSIYFTSYGHVEDVRI 360
Query: 381 PCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPL 419
PCQQ RMYGFVTF ET KHIL+ HF+C A+VLVKPY+EKS+ S+ + KP +
Sbjct: 361 PCQQKRMYGFVTFASSETVKHILAKGNPHFICNARVLVKPYREKSRSSRYLDNYKPLHGM 420
BLAST of Lsi10G000520 vs. ExPASy Swiss-Prot
Match:
Q6ZK57 (Zinc finger CCCH domain-containing protein 54 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0126700 PE=2 SV=2)
HSP 1 Score: 268.5 bits (685), Expect = 1.5e-70
Identity = 147/265 (55.47%), Postives = 178/265 (67.17%), Query Frame = 0
Query: 168 RSNRRCGLPV-KVCHYFNKGYCKHGSKCRYFHGQV-----TGESGN----EEQQIVIRSR 227
R+ R GL + CHYF+KG CK+G C Y H QV G + N Q +
Sbjct: 253 RARRSNGLSTRRPCHYFSKGICKNGQNCHYSHHQVYQDALAGAAINGDVYNHQPGGVTPG 312
Query: 228 NLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKL 287
+LE LEMEI ELL SRRG P+SIASLP +Y E+YGK LQADGYLTESQR+GKAG+SLT+L
Sbjct: 313 SLETLEMEITELLNSRRGQPVSIASLPTLYGEKYGKGLQADGYLTESQRHGKAGYSLTRL 372
Query: 288 LASLNSICVLDRPHGQHSVILAEDARKYIEFSEN-------------SARQIYLTFPAES 347
L+ LN I V++RPHGQHSV+LAEDA KY++F S+ QIYLTFPAES
Sbjct: 373 LSRLNKIRVIERPHGQHSVVLAEDAAKYMDFRGGGGGGGGDTGSVPASSHQIYLTFPAES 432
Query: 348 TFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLV 407
TF E DV+NYF +YGPV+DVRIPCQ+ RM+GFV+F ET IL HF+CG++VLV
Sbjct: 433 TFAEDDVANYFGQYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLV 492
BLAST of Lsi10G000520 vs. ExPASy Swiss-Prot
Match:
Q84ZT0 (Putative zinc finger CCCH domain-containing protein 51 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0583300 PE=4 SV=1)
HSP 1 Score: 204.9 bits (520), Expect = 2.0e-51
Identity = 115/231 (49.78%), Postives = 153/231 (66.23%), Query Frame = 0
Query: 178 KVCHY-FNKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSRNLENLEMEIVELLKSRRGI 237
K CH+ F +GYCK G C++FHG V E N Q V +L L+MEI ELL GI
Sbjct: 180 KPCHFHFFRGYCKKGVNCQFFHGSVP-ELHNPRQ--VHPFASLSKLDMEIRELL---IGI 239
Query: 238 --PISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQH 297
P+++ LP +Y+E+YGK L+ DG+LTESQ++G+ G SLT LL LN+I V++R HGQ+
Sbjct: 240 PPPVAVDRLPSMYFEKYGKPLRPDGWLTESQQHGRTGCSLTSLLMGLNTIRVVEREHGQY 299
Query: 298 SVILAEDAR-KYIEF-----------SENSARQIYLTFPAESTFTEQDVSNYFSKYGPVQ 357
V+L EDAR KY++ + + QIY+TFP S FT+ DV NYF ++GPV
Sbjct: 300 HVVLVEDARKKYMDCLGLAHSCNLMDTGTGSNQIYMTFPVHSKFTDDDVENYFKQFGPVS 359
Query: 358 DVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKL 394
VRIP Q+ RM+GFV+F+Y ET + ILS T HF+CG +VLVK Y EKS+L
Sbjct: 360 GVRIPYQEKRMFGFVSFLYTETVRLILSKGTAHFICGLRVLVKRYMEKSEL 404
BLAST of Lsi10G000520 vs. ExPASy Swiss-Prot
Match:
Q0D3J9 (Zinc finger CCCH domain-containing protein 53 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0682400 PE=2 SV=1)
HSP 1 Score: 156.8 bits (395), Expect = 6.2e-37
Identity = 141/467 (30.19%), Postives = 204/467 (43.68%), Query Frame = 0
Query: 21 MEFPESTEFVFDRIFKLEPEYASIILEYLIL-NINEDDMIRLALSSDTFIQCLIIKVKSD 80
M+ E+T+ VF RI L+P++A+ I+ +L++ + E +MIRLA + + ++ K + +
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60
Query: 81 LGI----------TQMAAPVPASAPTL-------------SSVSISDPN----------- 140
LG+ + AA A +P + S +S+S P+
Sbjct: 61 LGLLPASGPGTPTSVAAAAAAAHSPFMLSRQNSGRCGTAPSPLSVSSPSSWAPPPVFSRN 120
Query: 141 -----------LQFSSYTRAPSSRQLLPHSTFPLQNLMQYLSLDDQLESVN--------- 200
+ +P++ P F LM L L DQL +N
Sbjct: 121 NSISNGAGEEMVGLGDELISPANGGGPPSPFFGGDPLMDELQLQDQLAFLNEGGVPAGHQ 180
Query: 201 -----------PVGPDHSTHCSGFYSEQGMVGVRSNRRC---------GLPVKVCHYFNK 260
P G D G G R + GL K C Y+ +
Sbjct: 181 MPMFDGGECRSPGGGDGGLFSYNLGWANGGPGHRRSASVSELCLGGADGLGWKPCLYYAR 240
Query: 261 GYCKHGSKCRYFHGQVTGESGNE------EQQ---IVIRSRNLENLEMEIVELLKSRRGI 320
GYCK+GS CR+ HG + ++ + EQQ +IRS+ + + S G
Sbjct: 241 GYCKNGSACRFVHGGLPDDAAGKMDPSAVEQQCQDFLIRSK---SQRLAAAAFPYSPTG- 300
Query: 321 PISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSV 380
S+ P + LQ ESQR A + +L + + RP + +
Sbjct: 301 --SLPGSPSAATKCLSLLLQQQQQQNESQR---AAAAAALMLGGDEAHKFMGRPRLERA- 360
Query: 381 ILAEDARKYIEFSENSARQIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGF 404
+ +RQIYLTFPA+STF E+DVSNYFS YGPV DVRIP QQ RM+GF
Sbjct: 361 -------DFASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGF 420
BLAST of Lsi10G000520 vs. ExPASy Swiss-Prot
Match:
Q9SV09 (Zinc finger CCCH domain-containing protein 46 OS=Arabidopsis thaliana OX=3702 GN=At3g51950 PE=1 SV=1)
HSP 1 Score: 156.0 bits (393), Expect = 1.1e-36
Identity = 131/382 (34.29%), Postives = 184/382 (48.17%), Query Frame = 0
Query: 21 MEFPESTEFVFDRIFKLEPEYASIILEYLIL-NINEDDMIRLALSSDTFIQCLIIKVKSD 80
M+ E+T V RI L+PE AS I+ L+L + E +MIRLA +T + +I+K K +
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 81 LGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQLLPHSTFPLQNLMQYLSLDD 140
LG+ + + L IS N + SS P+S + ++L L D
Sbjct: 61 LGLMNCSRSPWSHQDEL----ISPKNNRGSSLN--PASLPFYANGGRSSRDLTNDFELMD 120
Query: 141 QL--ESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYF 200
+ S + +G H+ S G G G+P C YF +G+CK+G+ CR+
Sbjct: 121 DMNSRSTDFLGSVHARSGSCVLDGLGYGGDSDLGFGGVP---CSYFARGFCKNGASCRFV 180
Query: 201 HGQVTGESGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQA 260
H + +I + N ++ + +R +P + G +LQ
Sbjct: 181 HSDGGADLVGSPSRIELLRSN--SVPPRLAHHFMTRSSLP---------SFSTKGVNLQQ 240
Query: 261 DGYLTESQRNGKA---GFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSAR 320
+ + QR A G L KL RP +A A +R
Sbjct: 241 N----DVQRAAAALMIGDELQKLGRW--------RPERIDLSAMACPA----------SR 300
Query: 321 QIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTT 380
QIYLTFPA+S F E+DVSNYFS +GPVQDVRIP QQ RM+GFVTFVY ET K IL+
Sbjct: 301 QIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKSILAKGNP 340
Query: 381 HFVCGAQVLVKPYKEKSKLSQR 397
HFVC ++VLVKPYKEK K+ +
Sbjct: 361 HFVCDSRVLVKPYKEKGKVPDK 340
BLAST of Lsi10G000520 vs. ExPASy TrEMBL
Match:
A0A6J1J5W0 (zinc finger CCCH domain-containing protein 18-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483739 PE=4 SV=1)
HSP 1 Score: 454.9 bits (1169), Expect = 4.1e-124
Identity = 250/403 (62.03%), Postives = 290/403 (71.96%), Query Frame = 0
Query: 21 MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDL 80
ME PE T +F RI +L+ E A+ I+EY+ILN ++ DMIRLA DT +Q I KSDL
Sbjct: 1 MELPEPTNLLFQRICELDAECATTIIEYIILNTDDRDMIRLAFCPDTVLQSFIEDAKSDL 60
Query: 81 GITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQLLP---HSTFPLQNLMQYLSL 140
GIT+M + LS VSISDP L S Y R PSSR L P +S +QN MQ+LSL
Sbjct: 61 GITEMV------SSALSPVSISDPYLPLSVYRRDPSSR-LFPSESYSDLDIQNPMQFLSL 120
Query: 141 DDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYF 200
+DQ ESVN VG RR P+K+CHYF+KGYCKHGSKCRYF
Sbjct: 121 EDQFESVNTVG---------------------LRR--FPLKICHYFSKGYCKHGSKCRYF 180
Query: 201 HGQVTGESGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQA 260
HGQV N EQ++++R + LENLEMEIV LLKSRRG PISIASLP+VYYE YGK+LQA
Sbjct: 181 HGQVKAAHANHEQRVILRGKALENLEMEIVGLLKSRRGSPISIASLPIVYYEFYGKNLQA 240
Query: 261 DGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY 320
DGYLTE + G+A FSLT+LL+SLNSICVLDRPHGQHS+IL ED KYI+ SEN ARQIY
Sbjct: 241 DGYLTEGRGFGRACFSLTRLLSSLNSICVLDRPHGQHSLILVEDIGKYIDSSENIARQIY 300
Query: 321 LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFV 380
+TFPA STFTEQDVS+YF KYGPVQDV+IP QQSRMYGFVTFVY ETA+H+LS TTHFV
Sbjct: 301 ITFPAASTFTEQDVSSYFDKYGPVQDVKIPYQQSRMYGFVTFVYAETARHVLSIRTTHFV 360
Query: 381 CGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDLEES 421
CGAQVLVKPYKEKS+L QR N E N EG++EE+
Sbjct: 361 CGAQVLVKPYKEKSRLIQRNNAE----------NNREGNMEEA 363
BLAST of Lsi10G000520 vs. ExPASy TrEMBL
Match:
A0A6J1JEP2 (zinc finger CCCH domain-containing protein 18-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483739 PE=4 SV=1)
HSP 1 Score: 454.9 bits (1169), Expect = 4.1e-124
Identity = 250/403 (62.03%), Postives = 290/403 (71.96%), Query Frame = 0
Query: 21 MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDL 80
ME PE T +F RI +L+ E A+ I+EY+ILN ++ DMIRLA DT +Q I KSDL
Sbjct: 1 MELPEPTNLLFQRICELDAECATTIIEYIILNTDDRDMIRLAFCPDTVLQSFIEDAKSDL 60
Query: 81 GITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQLLP---HSTFPLQNLMQYLSL 140
GIT+M + LS VSISDP L S Y R PSSR L P +S +QN MQ+LSL
Sbjct: 61 GITEMV------SSALSPVSISDPYLPLSVYRRDPSSR-LFPSESYSDLDIQNPMQFLSL 120
Query: 141 DDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYF 200
+DQ ESVN VG RR P+K+CHYF+KGYCKHGSKCRYF
Sbjct: 121 EDQFESVNTVG---------------------LRR--FPLKICHYFSKGYCKHGSKCRYF 180
Query: 201 HGQVTGESGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQA 260
HGQV N EQ++++R + LENLEMEIV LLKSRRG PISIASLP+VYYE YGK+LQA
Sbjct: 181 HGQVKAAHANHEQRVILRGKALENLEMEIVGLLKSRRGSPISIASLPIVYYEFYGKNLQA 240
Query: 261 DGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY 320
DGYLTE + G+A FSLT+LL+SLNSICVLDRPHGQHS+IL ED KYI+ SEN ARQIY
Sbjct: 241 DGYLTEGRGFGRACFSLTRLLSSLNSICVLDRPHGQHSLILVEDIGKYIDSSENIARQIY 300
Query: 321 LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFV 380
+TFPA STFTEQDVS+YF KYGPVQDV+IP QQSRMYGFVTFVY ETA+H+LS TTHFV
Sbjct: 301 ITFPAASTFTEQDVSSYFDKYGPVQDVKIPYQQSRMYGFVTFVYAETARHVLSIRTTHFV 360
Query: 381 CGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDLEES 421
CGAQVLVKPYKEKS+L QR N E N EG++EE+
Sbjct: 361 CGAQVLVKPYKEKSRLIQRNNAE----------NNREGNMEEA 363
BLAST of Lsi10G000520 vs. ExPASy TrEMBL
Match:
A0A6J1FXG9 (zinc finger CCCH domain-containing protein 18-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448478 PE=4 SV=1)
HSP 1 Score: 454.1 bits (1167), Expect = 6.9e-124
Identity = 245/403 (60.79%), Postives = 289/403 (71.71%), Query Frame = 0
Query: 21 MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDL 80
ME PE T +F RI +++ E A+ I+EY+ILN ++ DMIRLA DT +Q I KSDL
Sbjct: 1 MELPEPTNLLFQRICEMDAECATTIIEYIILNTDDRDMIRLAFCPDTVLQSFIEDAKSDL 60
Query: 81 GITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQLLP---HSTFPLQNLMQYLSL 140
GIT+M + LS VSISDP S Y R PSSR L P +S +QN M++LSL
Sbjct: 61 GITEMV------SSALSPVSISDPYFPLSVYRRDPSSR-LFPSESYSDLDIQNPMRFLSL 120
Query: 141 DDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYF 200
+DQ +SVNPVG G P K+CHYF+KGYCKHGSKCRYF
Sbjct: 121 EDQFDSVNPVG-----------------------LRGFPFKICHYFSKGYCKHGSKCRYF 180
Query: 201 HGQVTGESGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQA 260
HGQV + N EQ++++R + LENLEMEIV LLKSRRG PISIASLPMVYY+ YGK+LQA
Sbjct: 181 HGQVKAANANHEQRVILRGKALENLEMEIVGLLKSRRGSPISIASLPMVYYDFYGKNLQA 240
Query: 261 DGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY 320
DGYLTE + G+A FSLT+LL+SLNSICVLDRPHGQHS+IL ED KYI+ SEN ARQIY
Sbjct: 241 DGYLTEGRGFGRACFSLTRLLSSLNSICVLDRPHGQHSLILVEDIGKYIDSSENIARQIY 300
Query: 321 LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFV 380
+TFPA STFTEQDVS+YF KYGPVQDV+IP QQ+RMYGFVTFVY ETA+H+LS TTHFV
Sbjct: 301 ITFPAASTFTEQDVSSYFDKYGPVQDVKIPYQQTRMYGFVTFVYAETARHVLSIRTTHFV 360
Query: 381 CGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDLEES 421
CGAQVLVKPYKEKS+L QR N E N EG++EE+
Sbjct: 361 CGAQVLVKPYKEKSRLIQRNNAE----------NNSEGNMEEA 363
BLAST of Lsi10G000520 vs. ExPASy TrEMBL
Match:
A0A6J1FU98 (zinc finger CCCH domain-containing protein 18-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448478 PE=4 SV=1)
HSP 1 Score: 454.1 bits (1167), Expect = 6.9e-124
Identity = 245/403 (60.79%), Postives = 289/403 (71.71%), Query Frame = 0
Query: 21 MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDL 80
ME PE T +F RI +++ E A+ I+EY+ILN ++ DMIRLA DT +Q I KSDL
Sbjct: 1 MELPEPTNLLFQRICEMDAECATTIIEYIILNTDDRDMIRLAFCPDTVLQSFIEDAKSDL 60
Query: 81 GITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQLLP---HSTFPLQNLMQYLSL 140
GIT+M + LS VSISDP S Y R PSSR L P +S +QN M++LSL
Sbjct: 61 GITEMV------SSALSPVSISDPYFPLSVYRRDPSSR-LFPSESYSDLDIQNPMRFLSL 120
Query: 141 DDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYF 200
+DQ +SVNPVG G P K+CHYF+KGYCKHGSKCRYF
Sbjct: 121 EDQFDSVNPVG-----------------------LRGFPFKICHYFSKGYCKHGSKCRYF 180
Query: 201 HGQVTGESGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQA 260
HGQV + N EQ++++R + LENLEMEIV LLKSRRG PISIASLPMVYY+ YGK+LQA
Sbjct: 181 HGQVKAANANHEQRVILRGKALENLEMEIVGLLKSRRGSPISIASLPMVYYDFYGKNLQA 240
Query: 261 DGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY 320
DGYLTE + G+A FSLT+LL+SLNSICVLDRPHGQHS+IL ED KYI+ SEN ARQIY
Sbjct: 241 DGYLTEGRGFGRACFSLTRLLSSLNSICVLDRPHGQHSLILVEDIGKYIDSSENIARQIY 300
Query: 321 LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFV 380
+TFPA STFTEQDVS+YF KYGPVQDV+IP QQ+RMYGFVTFVY ETA+H+LS TTHFV
Sbjct: 301 ITFPAASTFTEQDVSSYFDKYGPVQDVKIPYQQTRMYGFVTFVYAETARHVLSIRTTHFV 360
Query: 381 CGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDLEES 421
CGAQVLVKPYKEKS+L QR N E N EG++EE+
Sbjct: 361 CGAQVLVKPYKEKSRLIQRNNAE----------NNSEGNMEEA 363
BLAST of Lsi10G000520 vs. ExPASy TrEMBL
Match:
A0A6J1CFC6 (zinc finger CCCH domain-containing protein 18 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011175 PE=4 SV=1)
HSP 1 Score: 442.6 bits (1137), Expect = 2.1e-120
Identity = 245/417 (58.75%), Postives = 303/417 (72.66%), Query Frame = 0
Query: 21 MEFPESTEFVFDRIFKLEPEYASIILEYLILN-INEDDMIRLALSSDTFIQCLIIKVKSD 80
M+F +ST+ V++RI KLEPEY S I+ YL+L+ E DMIR+A S D+ IQ L+ K KS+
Sbjct: 1 MDFSKSTKVVYERIHKLEPEYVSKIIGYLLLHGHGEHDMIRVAFSPDSVIQFLVDKAKSE 60
Query: 81 LGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSS---RQLLPHSTFPLQNLMQYLS 140
LGI ++AAP PA DP LQ S +PS L+ + LQ+ MQ+++
Sbjct: 61 LGIPEIAAPAPA-----------DPYLQLSRLIPSPSPAAYSDLVVSEDYSLQSRMQFMT 120
Query: 141 LDDQLES-VNPVGPDHSTHCSGFYSEQGMVGVRSNRR----CGLPVKVCHYFNKGYCKHG 200
L++QLES +NPVG + S +Y + +G+R +RR PVKVCHYF+KGYCKHG
Sbjct: 121 LEEQLESLMNPVGVEFG---SNWYVPEPPLGLRRSRRSPSVAEFPVKVCHYFSKGYCKHG 180
Query: 201 SKCRYFHGQ--VTGESG----NEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPM 260
+ CRYFH Q ESG E+QI++ LE LEMEI+ELLKSRRG PISIASLPM
Sbjct: 181 NNCRYFHVQPVAVAESGIDQFGNEEQIIVSPGPLEKLEMEIIELLKSRRGAPISIASLPM 240
Query: 261 VYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKY 320
+YYE+YG++LQADGYLTESQR+GKAG+SLTKLLA L I ++DRPHGQHSVILAEDA KY
Sbjct: 241 IYYEKYGRNLQADGYLTESQRHGKAGYSLTKLLARLKCIRLIDRPHGQHSVILAEDAPKY 300
Query: 321 IEFS--ENSARQIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVE 380
+EFS E +RQIYLTFPAES+FTEQDVSNYFSKYG VQDVRIPCQQ RM+GFVTF Y E
Sbjct: 301 MEFSAVETGSRQIYLTFPAESSFTEQDVSNYFSKYGHVQDVRIPCQQKRMFGFVTFTYAE 360
Query: 381 TAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYM-EGDLEE 420
T K ILS H VCGA+VLVKPY+EK +L +RK+ EK P P+ Y+ N+M +GDLE+
Sbjct: 361 TVKEILSKGNPHSVCGARVLVKPYREKPRLFERKSAEKSPLPMHYIHNFMDQGDLEQ 403
BLAST of Lsi10G000520 vs. NCBI nr
Match:
XP_023512132.1 (zinc finger CCCH domain-containing protein 18-like isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 456.8 bits (1174), Expect = 2.2e-124
Identity = 247/403 (61.29%), Postives = 288/403 (71.46%), Query Frame = 0
Query: 21 MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDL 80
ME PE T +F RI +++ E A+ I+EY+ILN ++ DMIRLA DT +Q I KSDL
Sbjct: 1 MELPEPTNLLFQRICEMDAECATTIIEYIILNTDDRDMIRLAFCPDTVLQSFIEDAKSDL 60
Query: 81 GITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQLLP---HSTFPLQNLMQYLSL 140
GIT+M + LS VSISDP S Y R PSSR L P +S +QN MQ+LSL
Sbjct: 61 GITEMV------SSALSPVSISDPYFPLSVYRRDPSSR-LFPSESYSDLDIQNPMQFLSL 120
Query: 141 DDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYF 200
+DQ ESVNPVG G P K+CHYF KGYCKHGSKCRYF
Sbjct: 121 EDQFESVNPVG-----------------------LRGFPFKICHYFRKGYCKHGSKCRYF 180
Query: 201 HGQVTGESGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQA 260
HGQV + N EQ++++R + LENLEMEIV LLKSRRG PISIASLPMVYY+ YGK+LQA
Sbjct: 181 HGQVKAANANHEQRVILRGKALENLEMEIVGLLKSRRGSPISIASLPMVYYDFYGKNLQA 240
Query: 261 DGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY 320
DGYLTE + G+A FSLT+LL+SLNSICVLDRPHGQHS+IL ED K+I+ SEN ARQIY
Sbjct: 241 DGYLTEGRGFGRACFSLTRLLSSLNSICVLDRPHGQHSLILVEDIGKHIDSSENIARQIY 300
Query: 321 LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFV 380
+TFPA STFTEQDVSNYF KYGPVQDV+IP QQ+RMYGFVTFVY ETA+H+LS TTHFV
Sbjct: 301 ITFPAASTFTEQDVSNYFDKYGPVQDVKIPYQQTRMYGFVTFVYAETARHVLSVRTTHFV 360
Query: 381 CGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDLEES 421
CGAQVLVKPYKEKS+L QR N E N EG++EE+
Sbjct: 361 CGAQVLVKPYKEKSRLIQRNNAE----------NNSEGNMEEA 363
BLAST of Lsi10G000520 vs. NCBI nr
Match:
XP_023512131.1 (zinc finger CCCH domain-containing protein 18-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 456.8 bits (1174), Expect = 2.2e-124
Identity = 247/403 (61.29%), Postives = 288/403 (71.46%), Query Frame = 0
Query: 21 MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDL 80
ME PE T +F RI +++ E A+ I+EY+ILN ++ DMIRLA DT +Q I KSDL
Sbjct: 1 MELPEPTNLLFQRICEMDAECATTIIEYIILNTDDRDMIRLAFCPDTVLQSFIEDAKSDL 60
Query: 81 GITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQLLP---HSTFPLQNLMQYLSL 140
GIT+M + LS VSISDP S Y R PSSR L P +S +QN MQ+LSL
Sbjct: 61 GITEMV------SSALSPVSISDPYFPLSVYRRDPSSR-LFPSESYSDLDIQNPMQFLSL 120
Query: 141 DDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYF 200
+DQ ESVNPVG G P K+CHYF KGYCKHGSKCRYF
Sbjct: 121 EDQFESVNPVG-----------------------LRGFPFKICHYFRKGYCKHGSKCRYF 180
Query: 201 HGQVTGESGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQA 260
HGQV + N EQ++++R + LENLEMEIV LLKSRRG PISIASLPMVYY+ YGK+LQA
Sbjct: 181 HGQVKAANANHEQRVILRGKALENLEMEIVGLLKSRRGSPISIASLPMVYYDFYGKNLQA 240
Query: 261 DGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY 320
DGYLTE + G+A FSLT+LL+SLNSICVLDRPHGQHS+IL ED K+I+ SEN ARQIY
Sbjct: 241 DGYLTEGRGFGRACFSLTRLLSSLNSICVLDRPHGQHSLILVEDIGKHIDSSENIARQIY 300
Query: 321 LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFV 380
+TFPA STFTEQDVSNYF KYGPVQDV+IP QQ+RMYGFVTFVY ETA+H+LS TTHFV
Sbjct: 301 ITFPAASTFTEQDVSNYFDKYGPVQDVKIPYQQTRMYGFVTFVYAETARHVLSVRTTHFV 360
Query: 381 CGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDLEES 421
CGAQVLVKPYKEKS+L QR N E N EG++EE+
Sbjct: 361 CGAQVLVKPYKEKSRLIQRNNAE----------NNSEGNMEEA 363
BLAST of Lsi10G000520 vs. NCBI nr
Match:
XP_022985798.1 (zinc finger CCCH domain-containing protein 18-like isoform X2 [Cucurbita maxima])
HSP 1 Score: 454.9 bits (1169), Expect = 8.4e-124
Identity = 250/403 (62.03%), Postives = 290/403 (71.96%), Query Frame = 0
Query: 21 MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDL 80
ME PE T +F RI +L+ E A+ I+EY+ILN ++ DMIRLA DT +Q I KSDL
Sbjct: 1 MELPEPTNLLFQRICELDAECATTIIEYIILNTDDRDMIRLAFCPDTVLQSFIEDAKSDL 60
Query: 81 GITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQLLP---HSTFPLQNLMQYLSL 140
GIT+M + LS VSISDP L S Y R PSSR L P +S +QN MQ+LSL
Sbjct: 61 GITEMV------SSALSPVSISDPYLPLSVYRRDPSSR-LFPSESYSDLDIQNPMQFLSL 120
Query: 141 DDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYF 200
+DQ ESVN VG RR P+K+CHYF+KGYCKHGSKCRYF
Sbjct: 121 EDQFESVNTVG---------------------LRR--FPLKICHYFSKGYCKHGSKCRYF 180
Query: 201 HGQVTGESGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQA 260
HGQV N EQ++++R + LENLEMEIV LLKSRRG PISIASLP+VYYE YGK+LQA
Sbjct: 181 HGQVKAAHANHEQRVILRGKALENLEMEIVGLLKSRRGSPISIASLPIVYYEFYGKNLQA 240
Query: 261 DGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY 320
DGYLTE + G+A FSLT+LL+SLNSICVLDRPHGQHS+IL ED KYI+ SEN ARQIY
Sbjct: 241 DGYLTEGRGFGRACFSLTRLLSSLNSICVLDRPHGQHSLILVEDIGKYIDSSENIARQIY 300
Query: 321 LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFV 380
+TFPA STFTEQDVS+YF KYGPVQDV+IP QQSRMYGFVTFVY ETA+H+LS TTHFV
Sbjct: 301 ITFPAASTFTEQDVSSYFDKYGPVQDVKIPYQQSRMYGFVTFVYAETARHVLSIRTTHFV 360
Query: 381 CGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDLEES 421
CGAQVLVKPYKEKS+L QR N E N EG++EE+
Sbjct: 361 CGAQVLVKPYKEKSRLIQRNNAE----------NNREGNMEEA 363
BLAST of Lsi10G000520 vs. NCBI nr
Match:
XP_022985797.1 (zinc finger CCCH domain-containing protein 18-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 454.9 bits (1169), Expect = 8.4e-124
Identity = 250/403 (62.03%), Postives = 290/403 (71.96%), Query Frame = 0
Query: 21 MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDL 80
ME PE T +F RI +L+ E A+ I+EY+ILN ++ DMIRLA DT +Q I KSDL
Sbjct: 1 MELPEPTNLLFQRICELDAECATTIIEYIILNTDDRDMIRLAFCPDTVLQSFIEDAKSDL 60
Query: 81 GITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQLLP---HSTFPLQNLMQYLSL 140
GIT+M + LS VSISDP L S Y R PSSR L P +S +QN MQ+LSL
Sbjct: 61 GITEMV------SSALSPVSISDPYLPLSVYRRDPSSR-LFPSESYSDLDIQNPMQFLSL 120
Query: 141 DDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYF 200
+DQ ESVN VG RR P+K+CHYF+KGYCKHGSKCRYF
Sbjct: 121 EDQFESVNTVG---------------------LRR--FPLKICHYFSKGYCKHGSKCRYF 180
Query: 201 HGQVTGESGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQA 260
HGQV N EQ++++R + LENLEMEIV LLKSRRG PISIASLP+VYYE YGK+LQA
Sbjct: 181 HGQVKAAHANHEQRVILRGKALENLEMEIVGLLKSRRGSPISIASLPIVYYEFYGKNLQA 240
Query: 261 DGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY 320
DGYLTE + G+A FSLT+LL+SLNSICVLDRPHGQHS+IL ED KYI+ SEN ARQIY
Sbjct: 241 DGYLTEGRGFGRACFSLTRLLSSLNSICVLDRPHGQHSLILVEDIGKYIDSSENIARQIY 300
Query: 321 LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFV 380
+TFPA STFTEQDVS+YF KYGPVQDV+IP QQSRMYGFVTFVY ETA+H+LS TTHFV
Sbjct: 301 ITFPAASTFTEQDVSSYFDKYGPVQDVKIPYQQSRMYGFVTFVYAETARHVLSIRTTHFV 360
Query: 381 CGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDLEES 421
CGAQVLVKPYKEKS+L QR N E N EG++EE+
Sbjct: 361 CGAQVLVKPYKEKSRLIQRNNAE----------NNREGNMEEA 363
BLAST of Lsi10G000520 vs. NCBI nr
Match:
XP_022943887.1 (zinc finger CCCH domain-containing protein 18-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 454.1 bits (1167), Expect = 1.4e-123
Identity = 245/403 (60.79%), Postives = 289/403 (71.71%), Query Frame = 0
Query: 21 MEFPESTEFVFDRIFKLEPEYASIILEYLILNINEDDMIRLALSSDTFIQCLIIKVKSDL 80
ME PE T +F RI +++ E A+ I+EY+ILN ++ DMIRLA DT +Q I KSDL
Sbjct: 1 MELPEPTNLLFQRICEMDAECATTIIEYIILNTDDRDMIRLAFCPDTVLQSFIEDAKSDL 60
Query: 81 GITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQLLP---HSTFPLQNLMQYLSL 140
GIT+M + LS VSISDP S Y R PSSR L P +S +QN M++LSL
Sbjct: 61 GITEMV------SSALSPVSISDPYFPLSVYRRDPSSR-LFPSESYSDLDIQNPMRFLSL 120
Query: 141 DDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYF 200
+DQ +SVNPVG G P K+CHYF+KGYCKHGSKCRYF
Sbjct: 121 EDQFDSVNPVG-----------------------LRGFPFKICHYFSKGYCKHGSKCRYF 180
Query: 201 HGQVTGESGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQA 260
HGQV + N EQ++++R + LENLEMEIV LLKSRRG PISIASLPMVYY+ YGK+LQA
Sbjct: 181 HGQVKAANANHEQRVILRGKALENLEMEIVGLLKSRRGSPISIASLPMVYYDFYGKNLQA 240
Query: 261 DGYLTESQRNGKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIY 320
DGYLTE + G+A FSLT+LL+SLNSICVLDRPHGQHS+IL ED KYI+ SEN ARQIY
Sbjct: 241 DGYLTEGRGFGRACFSLTRLLSSLNSICVLDRPHGQHSLILVEDIGKYIDSSENIARQIY 300
Query: 321 LTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFV 380
+TFPA STFTEQDVS+YF KYGPVQDV+IP QQ+RMYGFVTFVY ETA+H+LS TTHFV
Sbjct: 301 ITFPAASTFTEQDVSSYFDKYGPVQDVKIPYQQTRMYGFVTFVYAETARHVLSIRTTHFV 360
Query: 381 CGAQVLVKPYKEKSKLSQRKNVEKPPPPLCYLQNYMEGDLEES 421
CGAQVLVKPYKEKS+L QR N E N EG++EE+
Sbjct: 361 CGAQVLVKPYKEKSRLIQRNNAE----------NNSEGNMEEA 363
BLAST of Lsi10G000520 vs. TAIR 10
Match:
AT2G05160.1 (CCCH-type zinc fingerfamily protein with RNA-binding domain )
HSP 1 Score: 337.8 bits (865), Expect = 1.4e-92
Identity = 210/432 (48.61%), Postives = 271/432 (62.73%), Query Frame = 0
Query: 21 MEFPESTEFVFDRIFKLEPEYASIILEYLIL--NINEDDMIRLALSSDTFIQCLIIKVKS 80
M F ES V RI +LEPE A+ I YL+L DMIRLA D+ + +I VK
Sbjct: 1 MNFTESMNVVHARIQQLEPENAAKIFGYLLLMQENGNRDMIRLAFCPDSVMCSVINCVKY 60
Query: 81 DLGITQMAAPVPAS----APTLSSVSISDPNLQFSSYTRAPSSRQLLPHST--FPLQNLM 140
+L P S P S + S P S P +ST LQN +
Sbjct: 61 ELARNSHHYHSPPSDHIPTPKFGSFTGSSP---LSVSVSPPMKTGFWENSTEMDTLQNNL 120
Query: 141 QYLSLDDQLESVNPVGPDHSTHCSGFYS-EQGMVGVRSNRRC----GLPVKVCHYFNKGY 200
Q+L+ +D L S P+ S +GF+S E+ + +R++RR PVK+CHYFNKG+
Sbjct: 121 QFLNFEDPLTS-----PEFS---NGFFSQERQCLPLRTSRRSPSLPEFPVKICHYFNKGF 180
Query: 201 CKHGSKCRYFHGQVTGE-----------SGNEEQQIVIRSRNLENLEMEIVELLKSRRGI 260
CKHG+ CRYFHGQ+ E + +++ V+ +LE LE EI+ELLK RRG
Sbjct: 181 CKHGNNCRYFHGQIIPERESFAQMFNPNNNLSDEEHVVSPVSLEKLEGEIIELLKLRRGA 240
Query: 261 PISIASLPMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASL-NSICVLDRPHGQHS 320
PISIASLPM+YYE+YG++LQA+GYLTESQR+GKAG+SLTKLLA L N+I ++DRPHGQHS
Sbjct: 241 PISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNTIRLVDRPHGQHS 300
Query: 321 VILAEDARKYIEFSEN---------SARQIYLTFPAESTFTEQDVSNYFSKYGPVQDVRI 380
VILAEDA K++E++ +RQIYLTFPAES+FTE DVS YF+ YG V+DVRI
Sbjct: 301 VILAEDASKFVEYTGERNEHGAILAGSRQIYLTFPAESSFTEHDVSIYFTSYGHVEDVRI 360
Query: 381 PCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPYKEKSKLSQRKNVEKPPPPL 419
PCQQ RMYGFVTF ET KHIL+ HF+C A+VLVKPY+EKS+ S+ + KP +
Sbjct: 361 PCQQKRMYGFVTFASSETVKHILAKGNPHFICNARVLVKPYREKSRSSRYLDNYKPLHGM 420
BLAST of Lsi10G000520 vs. TAIR 10
Match:
AT3G52980.1 (Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )
HSP 1 Score: 295.4 bits (755), Expect = 7.9e-80
Identity = 182/377 (48.28%), Postives = 244/377 (64.72%), Query Frame = 0
Query: 21 MEFPESTEFVFDRIFKLEPEYASIILEYLIL--NINEDDMIRLALSSDTFIQCLIIKVKS 80
M F E+ V +RI +LEPE AS I+ YL+L + N+ DMIRLA D+ ++ +I VK
Sbjct: 1 MNFTEAMNVVHNRIHQLEPENASKIIGYLLLMQDQNDRDMIRLAFCPDSVMRSMINCVKC 60
Query: 81 DLGITQMAAPVPAS--APTLSSVSISDPNLQFSSYTRAPSSRQLLPHSTFP--------- 140
+L +P+S S+S + Q + +P S + S +
Sbjct: 61 ELAKNSHYNNIPSSDHIQIRKFGSLSGSSNQSLLVSASPPSVLSMGTSFWENTNDMDSSL 120
Query: 141 LQNLMQYLSLDDQLESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRC----GLPVKVCHYF 200
N+ +L +D + S P+ ST S F ++ + +R++RR P+K+CHYF
Sbjct: 121 KDNVQYFLDFEDSVTS-----PEFST--SFFSQKKQSLSLRTSRRSLSLPEFPLKICHYF 180
Query: 201 NKGYCKHGSKCRYFHGQVTGESGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASL 260
NKG+CKHG+ C H ++ +++ V+ +LE LE EI+ELLKSRRG PISIA L
Sbjct: 181 NKGFCKHGNNC---HNNLS------DEEHVVSPGSLEKLEREIIELLKSRRGAPISIAFL 240
Query: 261 PMVYYEQYGKSLQADGYLTESQRNGKAGFSLTKLLASL-NSICVLDRPHGQHSVILAEDA 320
PM+Y+E+YG+SLQA+GYLTESQR+GKAGFSLTKLLA L N+I ++DRPHGQHSVILAED
Sbjct: 241 PMMYHEKYGRSLQAEGYLTESQRHGKAGFSLTKLLARLKNTIRLIDRPHGQHSVILAEDV 300
Query: 321 RKYIEF----SENSA-----RQIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRM 371
K++E+ SE+ A RQ+YLTFPAES+FTE DVSNYFS+ GPV+DVRIPCQQ RM
Sbjct: 301 SKFVEYTGERSEHGAILAGSRQVYLTFPAESSFTEHDVSNYFSEVGPVEDVRIPCQQKRM 360
BLAST of Lsi10G000520 vs. TAIR 10
Match:
AT3G51950.1 (Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )
HSP 1 Score: 156.0 bits (393), Expect = 7.5e-38
Identity = 131/382 (34.29%), Postives = 184/382 (48.17%), Query Frame = 0
Query: 21 MEFPESTEFVFDRIFKLEPEYASIILEYLIL-NINEDDMIRLALSSDTFIQCLIIKVKSD 80
M+ E+T V RI L+PE AS I+ L+L + E +MIRLA +T + +I+K K +
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 81 LGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQLLPHSTFPLQNLMQYLSLDD 140
LG+ + + L IS N + SS P+S + ++L L D
Sbjct: 61 LGLMNCSRSPWSHQDEL----ISPKNNRGSSLN--PASLPFYANGGRSSRDLTNDFELMD 120
Query: 141 QL--ESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYF 200
+ S + +G H+ S G G G+P C YF +G+CK+G+ CR+
Sbjct: 121 DMNSRSTDFLGSVHARSGSCVLDGLGYGGDSDLGFGGVP---CSYFARGFCKNGASCRFV 180
Query: 201 HGQVTGESGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQA 260
H + +I + N ++ + +R +P + G +LQ
Sbjct: 181 HSDGGADLVGSPSRIELLRSN--SVPPRLAHHFMTRSSLP---------SFSTKGVNLQQ 240
Query: 261 DGYLTESQRNGKA---GFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSAR 320
+ + QR A G L KL RP +A A +R
Sbjct: 241 N----DVQRAAAALMIGDELQKLGRW--------RPERIDLSAMACPA----------SR 300
Query: 321 QIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTT 380
QIYLTFPA+S F E+DVSNYFS +GPVQDVRIP QQ RM+GFVTFVY ET K IL+
Sbjct: 301 QIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKSILAKGNP 340
Query: 381 HFVCGAQVLVKPYKEKSKLSQR 397
HFVC ++VLVKPYKEK K+ +
Sbjct: 361 HFVCDSRVLVKPYKEKGKVPDK 340
BLAST of Lsi10G000520 vs. TAIR 10
Match:
AT3G51950.2 (Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )
HSP 1 Score: 156.0 bits (393), Expect = 7.5e-38
Identity = 131/382 (34.29%), Postives = 184/382 (48.17%), Query Frame = 0
Query: 21 MEFPESTEFVFDRIFKLEPEYASIILEYLIL-NINEDDMIRLALSSDTFIQCLIIKVKSD 80
M+ E+T V RI L+PE AS I+ L+L + E +MIRLA +T + +I+K K +
Sbjct: 1 MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60
Query: 81 LGITQMAAPVPASAPTLSSVSISDPNLQFSSYTRAPSSRQLLPHSTFPLQNLMQYLSLDD 140
LG+ + + L IS N + SS P+S + ++L L D
Sbjct: 61 LGLMNCSRSPWSHQDEL----ISPKNNRGSSLN--PASLPFYANGGRSSRDLTNDFELMD 120
Query: 141 QL--ESVNPVGPDHSTHCSGFYSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYF 200
+ S + +G H+ S G G G+P C YF +G+CK+G+ CR+
Sbjct: 121 DMNSRSTDFLGSVHARSGSCVLDGLGYGGDSDLGFGGVP---CSYFARGFCKNGASCRFV 180
Query: 201 HGQVTGESGNEEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQA 260
H + +I + N ++ + +R +P + G +LQ
Sbjct: 181 HSDGGADLVGSPSRIELLRSN--SVPPRLAHHFMTRSSLP---------SFSTKGVNLQQ 240
Query: 261 DGYLTESQRNGKA---GFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSAR 320
+ + QR A G L KL RP +A A +R
Sbjct: 241 N----DVQRAAAALMIGDELQKLGRW--------RPERIDLSAMACPA----------SR 300
Query: 321 QIYLTFPAESTFTEQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTT 380
QIYLTFPA+S F E+DVSNYFS +GPVQDVRIP QQ RM+GFVTFVY ET K IL+
Sbjct: 301 QIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKSILAKGNP 340
Query: 381 HFVCGAQVLVKPYKEKSKLSQR 397
HFVC ++VLVKPYKEK K+ +
Sbjct: 361 HFVCDSRVLVKPYKEKGKVPDK 340
BLAST of Lsi10G000520 vs. TAIR 10
Match:
AT3G21100.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 137.1 bits (344), Expect = 3.6e-32
Identity = 125/434 (28.80%), Postives = 202/434 (46.54%), Query Frame = 0
Query: 21 MEFPESTEFVFDRIFKLEPEYASIILEYLIL-NINEDDMIRLALSSDTFIQCLIIKVKSD 80
M+ + T +F +I LEP++AS I+ YL+L ++ + D++RLAL +T +Q + +K KS
Sbjct: 1 MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGKTDLMRLALGPETLLQSVCLKAKSA 60
Query: 81 LGI-----TQMAAPV-PASAPT---LSSVSISDPNLQFSSYTRAPS--------SRQLLP 140
LG+ + ++P+ P S P S+S S P FS +PS S +
Sbjct: 61 LGLSSNGSSSASSPLNPISRPINIHRHSLSHSSPGNGFSRNPLSPSFATPGSLGSNPNMI 120
Query: 141 HSTFPL------------------------QNLMQYLSLDDQLESVNPVGPDHSTHCSGF 200
S F Q L YLS ++ S N D S GF
Sbjct: 121 SSPFQASSSLFASDGAAAGDSTGNGDFLDEQQLGNYLSFLNESSSKN---NDESLDPFGF 180
Query: 201 YSEQGMVGVRSNRRCGLPVKVCHYFNKGYCKHGSKCRYFHGQV-----------TGESGN 260
++ G ++R C + G R+ HG + + + +
Sbjct: 181 SADNG--DAHLHKRSFSASDACFGSEEPGFGGGGYNRFLHGGLGDDFDSPGGFGSPDYVS 240
Query: 261 EEQQIVIRSRNLENLEMEIVELLKSRRGIPISIASLPMVYYEQYGKSLQADGYLTESQRN 320
+Q+ ++R + + M + L + G P+S Y K L + + R+
Sbjct: 241 RQQEEIVRMKMAQRQRMAAAQYL-AATGSPMS-----------YEKGLNFLLHQRNAHRS 300
Query: 321 GKAGFSLTKLLASLNSICVLDRPHGQHSVILAEDARKYIEFSENSARQIYLTFPAESTFT 380
G F G+H ++ + S ++++QIYLTFPA+S+FT
Sbjct: 301 GAGQFGEEGYWFG---------SPGRHE---RDEFMGMGDKSNSASKQIYLTFPADSSFT 360
Query: 381 EQDVSNYFSKYGPVQDVRIPCQQSRMYGFVTFVYVETAKHILSTTTTHFVCGAQVLVKPY 402
++DVSNYF +GPVQDVRIP QQ RM+GFVTF++ ET + IL+ HF+C ++VLVKPY
Sbjct: 361 DEDVSNYFGNFGPVQDVRIPYQQKRMFGFVTFLHSETVRIILARGNPHFICDSRVLVKPY 405
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SJ41 | 2.0e-91 | 48.61 | Zinc finger CCCH domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN... | [more] |
Q6ZK57 | 1.5e-70 | 55.47 | Zinc finger CCCH domain-containing protein 54 OS=Oryza sativa subsp. japonica OX... | [more] |
Q84ZT0 | 2.0e-51 | 49.78 | Putative zinc finger CCCH domain-containing protein 51 OS=Oryza sativa subsp. ja... | [more] |
Q0D3J9 | 6.2e-37 | 30.19 | Zinc finger CCCH domain-containing protein 53 OS=Oryza sativa subsp. japonica OX... | [more] |
Q9SV09 | 1.1e-36 | 34.29 | Zinc finger CCCH domain-containing protein 46 OS=Arabidopsis thaliana OX=3702 GN... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1J5W0 | 4.1e-124 | 62.03 | zinc finger CCCH domain-containing protein 18-like isoform X1 OS=Cucurbita maxim... | [more] |
A0A6J1JEP2 | 4.1e-124 | 62.03 | zinc finger CCCH domain-containing protein 18-like isoform X2 OS=Cucurbita maxim... | [more] |
A0A6J1FXG9 | 6.9e-124 | 60.79 | zinc finger CCCH domain-containing protein 18-like isoform X2 OS=Cucurbita mosch... | [more] |
A0A6J1FU98 | 6.9e-124 | 60.79 | zinc finger CCCH domain-containing protein 18-like isoform X1 OS=Cucurbita mosch... | [more] |
A0A6J1CFC6 | 2.1e-120 | 58.75 | zinc finger CCCH domain-containing protein 18 isoform X2 OS=Momordica charantia ... | [more] |
Match Name | E-value | Identity | Description | |
XP_023512132.1 | 2.2e-124 | 61.29 | zinc finger CCCH domain-containing protein 18-like isoform X2 [Cucurbita pepo su... | [more] |
XP_023512131.1 | 2.2e-124 | 61.29 | zinc finger CCCH domain-containing protein 18-like isoform X1 [Cucurbita pepo su... | [more] |
XP_022985798.1 | 8.4e-124 | 62.03 | zinc finger CCCH domain-containing protein 18-like isoform X2 [Cucurbita maxima] | [more] |
XP_022985797.1 | 8.4e-124 | 62.03 | zinc finger CCCH domain-containing protein 18-like isoform X1 [Cucurbita maxima] | [more] |
XP_022943887.1 | 1.4e-123 | 60.79 | zinc finger CCCH domain-containing protein 18-like isoform X1 [Cucurbita moschat... | [more] |
Match Name | E-value | Identity | Description | |
AT2G05160.1 | 1.4e-92 | 48.61 | CCCH-type zinc fingerfamily protein with RNA-binding domain | [more] |
AT3G52980.1 | 7.9e-80 | 48.28 | Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ... | [more] |
AT3G51950.1 | 7.5e-38 | 34.29 | Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ... | [more] |
AT3G51950.2 | 7.5e-38 | 34.29 | Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ... | [more] |
AT3G21100.2 | 3.6e-32 | 28.80 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |