Lsi10G000270 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G000270
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	flowering time control protein FPA
Location	chr10: 443476 .. 452150 (-)
RNA-Seq Expression	Lsi10G000270
Synteny	Lsi10G000270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTAATAAAAAGAATTTGAAAATTGTGAACCCTAAGGACGACGAAGATGAGATTTTTGGTGGAGCGAGCGTTGATGAAGAAACTGAGCTTCCAAGAGCTTTTTAAGCTGCTTTCTCCTCGATGTCGTCTCTGAATCGAAGGGAGATCCACTTCCACTAGTATTTTGCTTGGTATTGCTACTTTCAACTTCTTTCTTCAACTTTTCGGAGTAGGTTTGGGGTTTTTGCTGTTTTGTTGCTCGAAACTCAGATACCAACGTTGAAATGGTGAGTTGTTTTTGCTGTTTTCGCTTCACTTCCGAGATGGGTTCGTTCCTCTGATTTGATTTCTTGTTTTTGGTTAGTCGGGCCGGGTTGATGGGGGAAGGGATCGATATCGTAAAGATTATACGTCGAGATATGACGAGAAGTTGCAGTCTGGGCATAGCAATAACAGCAATCCTCCGTCGAGACATCTCTGGGTGGGAAATTTGTCTCATGTTGTAGTGGAGCGTGATCTAAGCCGCTACTTTTCACAGTTTGGAGAGCTCGACAGTATTGCTTTCCAGCCCAGTAGGAGCTATGCTTTCATCAATTTCAAAAGGGATGAAGATGCAATGGCAGCCATCAGAGAGCTTCAAGGTTTTGCTCTTGGAGGGAATCCCATTAGAATTGAGTTTGCCAAGGCGGTTAGTCTTGCCCGAACTTCTATCTGTTACTTTATTCAAATTCTTTTTATGTTTCCTTATTGTACATCTTTGATAGAATATATAACTATTTGTTGGAAAACTTCATTAAGAGAAATGATGACACCACTCCACTTGTGTACCTCTTACTAATCCAAATGCTCTCATAACTCCATTCAAGACAATGCTGACCTCCACTGAATTAAACTCACTGAACTACATCACCTTGATCACTTCTCCACAGTTCTCAGTTTCACAGTAACAAAATTCTAATGTTTTATATAGTCTCAACTCTCAATCAGGTCTCAACTGGCATTACCTTAAACGTTAAAGGTTTAACTTGCTCAAGGTCATATGTAATGCCTTCCACTTCGTCTGCCTTGAAAATTTCTCTGAGTTGATTACATACACAAGATCTATGGATCTCAGTTGACCCATAAGGACGATGATAAACTACAAAGCAAGTGGTATTACATTCTTCAATCAAAATGACGAACACTCAACAAACACAACATTTTTCATCACTAACATGCTTAATTTAACACCCTCAGGCAACAAAAAAATGGCTAGGTCAAGGAGTAGTTTCATTTTTATGTGGTTAGAGAAAAGATAGAAACTTATAATTTGTGATTTCAATAGCATGGACTGTGACAGCTTACAAACGTGCAAGAATCAAGGAGCAATATGAGTTATATTTGCTTCAAAAGATAGACATACATTGTAGTTGAACAGTCCTTTGTTCTTGCACATTCTTTTAGTCATCTTTCTTCATGTTGTGATCTAATCAACCCTCTTATCACACCCTACGAGTTTAGACATGCTTCACAGGTGCAATAACAAATATCAATGACTTCTCAATCTAGAACAATAAAGCATTGTAACTTACCTGCCATTCCTTAATATTTAAATCTATCCTTAATATTTAAATCTATCGTTACATTGACGAATCTCAAGAATATAATGATATTGTATGTTAAGGAAGCTTTTTGCAGTTTCAGAAACAAGTCTTTCAGAATACAATGTAAAAAGTTATTAATTGTTATAAATTGATGTCCAAGAAAATATATATATATATATATATATATATATATATATACACTCTTCATGTTCTTTCATCAAATCCGCACAAGCATCTCCTTTATCAACTGTTGAGACATAACCTAATCAGATTGCTAAGGTTGTAGTGGGTTGTTTCATAGTGTATTATTGAACTGTGTGCCTCTGCCTATGTGCATGTTTATACCTATTAAATGGTAGAAATGTGTGACATATGGAAGATTGGACTTTGTTCCTGAAGGAAGAATTTTTCAAAAAACAGGTTCAGACATTCCTAGTTTGTAGTACCAAAGGTCTTCATAATTTACCAACCACTAGGCAAGCACTTTATCTCAAAATTTCCAATTTAAACTTTCAAGTATCAGGTTCGAACCCCATTATTAAGAAAACCTCAACGTCTCTTGCCTACGAATGACTCAATTTATTGGTATCACTCAGAGAGAAGGTAGTCCATAGATAAAAGGAAAATCTTGACCAATTTACAAGTATAACATAATTTCCAAATTTCCTGCAATATACTCATTTCATCTAATTAAAATGGAAATACTGGGAGCATCTAATTACCTAAAATCTTCAATGAACAAAATTATCAATAGTATTGGACTTCTTTATATCCTTTACCTTTTAAGGGGACATCTTTAGCTTTGACCATCTCTTCCATCATCATATAAGAGGATATTTCAGAAGCTCAAAAAATTGACATCTAAGCTAAGCATTATGTATACAATTGCTCTGAACATGACCACGCATCAAGAGTTCGTCATAGAACTACTTGAATTCAACACCATGTAAGCAATGAAGGGTTTTACATTTGAATTTTTTCCCCCTTTCCATTATCCTTTTTCCTCTTAATCCAGTACATTAATATATTATCCATTATGCTGCTTTATTGTTTTTCTTCTAATGCATCTTTAGGTGTTAGTGTAGCAAATAACAATATGTAAACACGTTTTAGCATAGGAAGAATGGTGATATTACAGTAGAAAATTTGAAATTATTGTGGAAGCTTACTTTTTCTGCTGGTGGATAACGTCCATAATTTGCAGCTTCTCATCATCGAATCAAAGTCTAAGACAGTTGCATAGACTAATCAGATGTTTGCAATTTGACATGACCATTCAATGCATCACAACGCCTCAAAGCTCATAAGACACATTGTCTAATAGACTTCTTTGTGCTGTGCTTTTTGTCTGCAGTAATCAAATATCTACTAGTAAATGGATACTTTTCCACATTAAAAAAATACTCAATATCTAACAAGAAATTTACACTGACTATTCAATTTTGACCATATTTCTCTTTCCATGTCGATACTCTTCGAAGTATGTTGAGAATTCTGAGGATATTCTCAGAAACATGTTGAGAACCCTGGGTACATAATTCATTTTCACTGTTCATCTAATCTTGTTAAACAACACAGAGGATCCTCTTCTCTTCACAAGGTAGAGTGAAGATTTCAATAAGCACAATGAAATTCTGATATAATGGAGATGCATTTTATATGTTGCTTAAACCTTCCAGTGAAGCCTAAGTGTGTATATTGTGCTCAAAGCAATTCCAAGGACACACATATTATGATATTATATAACCTTTGAGATGCACTGGTGGTGTACCTAATATGTTCAAATTAAAAAGAGTATTGTTTGGCACCATACCTGAGCTGTATTAGATTGTTCACACATTTTGTATATGAGAATGAATGAAAGAATACACGGGATATGTGACTTCCCTTGATCAGAAGCAGCTTCTAAGTTTTAATTGAAAACTTTAAAACATTTTACTGAGATCTCTAGTAAAAAAAATGGTAAACTCTTCTTTTCTTTTCTTTTTTTCTTTTTTTCCTTTTTTTTTAAAAAAAAAAAAATGTATAAAGGGATGCAGAGCTAACTTTCTAGTTATAATATAGCTTTAAGTCCTAAGCAATGCATATTCACTGCCCTAGTGGTATGTAGCATTTAGGTGCAAGTGCAAACACTTCATGGAGGCTGGGTTCGTAGTGCTGAGTAAAGCATGGCCTTCAATAAAGTATGGAGTGAGGCAACATGATATATATGATGTCCTTATTTTATTCTAACTATAGAAACACAGAAATCTTAGTGCTTAATTAATAAAAAAAACTAAAAAAATCTCAAGAGTGGTAAATGGTCAATATGTCATACAATAGATACCTCACTACACAGTACACACCAAACCAAAAGTCCTATGGATGGTTGCAGGAGGCTTGCATTTTGTGAAAGGAATGGTCCTTTTGTGCCTGATTTGTGGAAGCCCAGCACATATAATTCTGGTCCTGCAACAGCTGGTGTGGTGTTCTTGATGGATTGTGAGATCCACATGAATATTTGATTACACATATCTATACATTTTCTTCTTTTTAACAGATGTTTTCGCACATGCTCTGACTCATTCAATAAGAATGATTTTTTTTCTTTATTATTATTGTTTTTTTTTTTTTTTTTTGGGGGGGGGGGGGAGATGCGAGCAAAAATGTGATCAGTTGAACATTGTGAATAGTCAGCTCAGAGCACACTGGTCAAAAGACCTCGGTTCCAGAAGCCCATTTGGGTCATCAATTGAGGTATTAAATCATTAGATTGGAGGTCTTTGTGCAACCCCTGTAGCCTTTAGGTTGTTTTTGTTAACCTTTGGGATGGTGTCCAGTAGACAGCCTCAAATTGCATCAGCTAGATTGGAGACCTTCTGTGTGCTTACCCCTTGATATAGGGACTCCTCTCCCGGCCTTTAGGGTGTTTTTGGGGTTGGCTTAATATTGCGTTCTGTGTCTCACGAAATAATAATAATGAAAGAAGAGTTTATGTCTATAAACCTTGGTGAATATGAGCTGATAAAGGTTAAGCTTTGTGGGTGATGGCTACCTTTTGGAGAATTTGTTTTGAGGATTTTTGTTTATCTAGGAATGGTTTACACATCAAGAGTTCGTCATAGAACTACTTGAATTCAACATCATGTAAGCAATGAAGGGTTTTACATTTGAGGGGTTTTTTCCTTTTTTTTTTCTTTTCCATTGTCCTTTTTCCTCTTAATCCAGTACATTAATATATTATCCATTATACTGCTCTATTGTTTTTCTTCTAATGCATCTTTAGGTTTTAGTGTAGCAAATAACAATAGGTAAACACGTTTTAGCATGGGAAGAATTGTGATATTACAGTAGAAAATTTGAGATTATTGTGGAAGCTTACTCTTTCTGCTGGTGGATAACGTCCATAATTTGCAGCTTCTCATCATCGAATCGAAGTCTTAGACAGTTGCATAGACTAAATCAGATGTTTGCAATTTGACATGACCATTCAATGTAACATAACGCCTCAAAGCTCATAAGATATAGTTCAATAGACTTTTTTGCGCTGTGTTTTTTGTCTGCAGTAATCAAATATCTACTCGTAAATGGATACTTCCACATTAAAAGAATACTCAATATCTAACAAGAAATAGACAGACTATTCAATTTTTTGACCATATTTCTCTTTAATAAGAATTTTGCTCGCAGGATAAGCCATCTGCATTGTCACGCGATGAAGACTATTCTCAACATCGAGAGGAAAAATATTATGGAGCAAGGGGTTCCTTCGCACAGGGACGACATGCTAGTCCTGACCAATTTTATCCTGAAAAGTCCAAAATGAGCGATAAAAATACAGAGCCCAGTGAAGTGTTATGGATAGGATTTCCAGCTTTGTTAAAAGTGGATGAAATGATATTAAGGAAGGCCTTTTCACCGTTTGGGGAAATTGATAAGATTACAACATTCCCTGGGCGGACATATGCTTTCGTTCGTTTTCGGGGTGTGGCATCAGCGTGGAGGGCTAAAGAGACTCTACAGGGGAAACTATTTGGAAATCCCCGAGTACATATTTGTTTTGCAAAAAATGATTCTGGTTCATCAAACGGTGGAAGGAGCTCAATGAATGCACCTCTTTCTCCAAGATCTCCTCACCTTTTCTCAAACTTTGATTCTGGAGATTTTGATTCCCGTGGTCTTAATAGGAAAAGTAATTTATGGACTAGTGGGAACAATACGTTTGAAATGAAGAGGTCTGGAGAATTCTCATCAAAATTAGGTCCATCCCAAGATAGGTATGAACATGGTAGTCCAACAAAAGAGAGAGGTCCTCCTTTAAATAACTTTCCTCAAAGTAACTTTCCTCAAAGATTTCCTCAACCTAGTCCATTTTATGAAGATCCATGGGACTTGCCGGAGGATACAAACTTGTATCATGGGTCCAAGAAATTGAAGACTGGACCCTTTCCCCAGGATAAAGAGCTCCCTGAGTACCCATTATCTGATTTGGAACAAGATAAACGTATTATTCCAAAGTTATACCCTGATTTTCCCCCATCAGAAACCTTTGATAAGAAGATGAAGTCTGGGCCACCTCTGGGGTATAAACAGACTCCGGATCGGCCTATAACAATGCCTGTCCCTTATGGGGAAAAGAGTGAACAGTGGAGGGAACCATATGATAATTTTCAGGATCCTGATTTTCTGCCACCCAATGCTGCTGCAAGGAAAAGGTTCTCTCCTGATTCAGAACAGTCATCTGTAAAAGAGTGGAAATGGGAAGGAACTATTGCAAAGGGTGGAACACCTGTTTGTCGTGCTCGCTGCTTTCCTGTGGGAAAGATTCTGGATATGCTGTTGTAAGTATTTGATGTTCCTTCTTAGTCTATGATTAGTGAAGTTTTCGTTAAATGATTTAATTACGATGAGATAATTTGTACTTTCATGGTAGCTGTAGTTTTGAAGATGAAGAATGTTTAAGCAATCCTTCATTCCGAGTTTCGTTTTGTTTTGTTTTTTTTTTAAATGTTTTTGGACTCGTTAATTAGCATTCCAAAGAGCAAAATATTCAGACGATTTCTTCCTGAAACTTCCAACAGTTTTATGTGATCAGATTCGCTTCTGCTGCAATTTGGTTCTTGTTCTCTCTTTAAGTTTCATGGAATTCAGGACTGTCCATAAATTGTGTGCAAATGATTGAAAGGGAAAATTTTCTCTCGCCTACTAAGAATGTCTTATGAACACTTGTATAGATCACTTATGAAACTTATCTCGTATTCTGCAGGCCAGAGTTCTTAGATTGTACTGCAAGAACTGGTCTAGACATGCTTTCAAAGCATTACTATGAAGCAGCTAGTGCTTGGGTTGTTTTCTTTGTACCTGAAAGTGATTCTGACATTGTATTCTACAATGAATTCATGCACTATCTCGGTGAAAAGCAACGAGCAGCTGTTGCCAAGTTGGATGACAGAACCACCTTGTTTCTTGTACCACCATCTGAGTTCTCAGAAAAAGTGCTCAAAGTACCAGGTAAATTGAGCATTTCAGGGGTAGTTCTGAGGTTAGAGCGTCCTGGTAGCATTGCAAGGCCTCCTCCTTATCAAAACGAAACAAAAGACACAAACTTGTTACCTTTACATAGCGAAACAGTATATACAAAATTACCTACGCCTCCAGCTGGTTTTGCCCCTGTATCATCTTTATCTGATCTCAGTAAATCAGGCATCAATAATACATCCTTGCATAGGAATGTCGCTACTTCAGCTTCACCTGTGTTATTTCGTGGTTCAGCCCAATCTGTTGGAAGTTTGTCTGACCAATATATTGAGAACAGACATGAGTATCCAAATCAACAACAGCAAAATGCCATGGGACCTAACTCAACTTCTCACCATCTACAGAATTCAATGTTGGATATTCGAAATATTCAGCCACAAGCTTCCAACAATTCAATGGATCCTGTTATTCAAGAACGTCATTTTGTCATTCCTAGGGAAATTCAGGAAACAGGCTCCAGTAATTATACCGTTGGAAATTCTACTGTTACATCTGGAAACGCTTTATCAACTCAACAAGAAATAAAGCCAGCAGCCTCTTTGGCTACGACTCTTTCCTCCCTACCGCCAGACCAACTGGCACAATTAGCATCATCTCTGCTTGGGCATCAAAGGCAGCCGGGGAGTATGTCGAATGTAACCATGGCTGAAGAATTGAGGCAGCGGAACTTGGTCAATGAATCTGTTGTGCCATTGGCAAGGTCTCAAAATGGTTCTTTCCAGAATAGTCTGATGAACTCTGAGCCTCAGACATCCCAAATGGTTCAAGTTCCACAGATACAGCATGTACAACAACACCAGATGTCGAACGTGACTGCTGGGCAGCTTATGGCACAAAGAGACCTTCAGACAGGGGCTTTAGGCAATAATCATCAGCAAGTACAAAACTCTGATGCGCGTGGGGAAGGAGAAGCAGATCCGCAGAAACGCCTCCAAGCTACGCTTCAGCTGGCAGCTGCTCTTCTCCAGCAAATTCAACAAGGAAAAGGAAATTGATCAGTCTCGCTTGATCATGTGAAATAAACTAATGTGGAGTTCCACAACAATGGGATAGTCATCCTACAGATGATGTGAAGGAATTAACATCTCCCAAGGGGGGAAATAACGAATGCAGAGCATGCATCATCAGCTACTTTGCCAGCGCTAATATTTGTTATCCTAAGTAACAAGTCTCTTTTTCTATTATTATTTTTATTTTTCTAATTTGTTTATAAGATGTTCGATTAGCTAGTTAGTTAGTAGCCCACAGCTTGCTGGTCTGATGCTATTAGAAACAGGAGGCATTTATGGTAGTATTGCTATTTTGTTTAATTCCCATTTTGAAATTTTGTTGTTCTTTCTTTATTTTGTTCCTTAGTAACTATAACTTGGGGAGGAGAGTTCCACTTCGTTGGGTCAACCATTTTCTCATACTGGCCGATCATATGATGTTTCGTAAAACTGTGAATGTGATGATGGGTTTGGCTAGAAATTATGTATGATATTGAAGTTCAGTTCTTGGTTTTGCTGGAATCTTTCCCAAGAATGCCACATTTTTAGTAGATGAGAAAGGGAAGTTCCAAAATGATGAATAATAATAGTCAAAATGCAACAAAT

mRNA sequence

AATTAATAAAAAGAATTTGAAAATTGTGAACCCTAAGGACGACGAAGATGAGATTTTTGGTGGAGCGAGCGTTGATGAAGAAACTGAGCTTCCAAGAGCTTTTTAAGCTGCTTTCTCCTCGATGTCGTCTCTGAATCGAAGGGAGATCCACTTCCACTAGTATTTTGCTTGGTATTGCTACTTTCAACTTCTTTCTTCAACTTTTCGGAGTAGGTTTGGGGTTTTTGCTGTTTTGTTGCTCGAAACTCAGATACCAACGTTGAAATGTCGGGCCGGGTTGATGGGGGAAGGGATCGATATCGTAAAGATTATACGTCGAGATATGACGAGAAGTTGCAGTCTGGGCATAGCAATAACAGCAATCCTCCGTCGAGACATCTCTGGGTGGGAAATTTGTCTCATGTTGTAGTGGAGCGTGATCTAAGCCGCTACTTTTCACAGTTTGGAGAGCTCGACAGTATTGCTTTCCAGCCCAGTAGGAGCTATGCTTTCATCAATTTCAAAAGGGATGAAGATGCAATGGCAGCCATCAGAGAGCTTCAAGGTTTTGCTCTTGGAGGGAATCCCATTAGAATTGAGTTTGCCAAGGCGGATAAGCCATCTGCATTGTCACGCGATGAAGACTATTCTCAACATCGAGAGGAAAAATATTATGGAGCAAGGGGTTCCTTCGCACAGGGACGACATGCTAGTCCTGACCAATTTTATCCTGAAAAGTCCAAAATGAGCGATAAAAATACAGAGCCCAGTGAAGTGTTATGGATAGGATTTCCAGCTTTGTTAAAAGTGGATGAAATGATATTAAGGAAGGCCTTTTCACCGTTTGGGGAAATTGATAAGATTACAACATTCCCTGGGCGGACATATGCTTTCGTTCGTTTTCGGGGTGTGGCATCAGCGTGGAGGGCTAAAGAGACTCTACAGGGGAAACTATTTGGAAATCCCCGAGTACATATTTGTTTTGCAAAAAATGATTCTGGTTCATCAAACGGTGGAAGGAGCTCAATGAATGCACCTCTTTCTCCAAGATCTCCTCACCTTTTCTCAAACTTTGATTCTGGAGATTTTGATTCCCGTGGTCTTAATAGGAAAAGTAATTTATGGACTAGTGGGAACAATACGTTTGAAATGAAGAGGTCTGGAGAATTCTCATCAAAATTAGGTCCATCCCAAGATAGGTATGAACATGGTAGTCCAACAAAAGAGAGAGGTCCTCCTTTAAATAACTTTCCTCAAAGTAACTTTCCTCAAAGATTTCCTCAACCTAGTCCATTTTATGAAGATCCATGGGACTTGCCGGAGGATACAAACTTGTATCATGGGTCCAAGAAATTGAAGACTGGACCCTTTCCCCAGGATAAAGAGCTCCCTGAGTACCCATTATCTGATTTGGAACAAGATAAACGTATTATTCCAAAGTTATACCCTGATTTTCCCCCATCAGAAACCTTTGATAAGAAGATGAAGTCTGGGCCACCTCTGGGGTATAAACAGACTCCGGATCGGCCTATAACAATGCCTGTCCCTTATGGGGAAAAGAGTGAACAGTGGAGGGAACCATATGATAATTTTCAGGATCCTGATTTTCTGCCACCCAATGCTGCTGCAAGGAAAAGGTTCTCTCCTGATTCAGAACAGTCATCTGTAAAAGAGTGGAAATGGGAAGGAACTATTGCAAAGGGTGGAACACCTGTTTGTCGTGCTCGCTGCTTTCCTGTGGGAAAGATTCTGGATATGCTGTTGCCAGAGTTCTTAGATTGTACTGCAAGAACTGGTCTAGACATGCTTTCAAAGCATTACTATGAAGCAGCTAGTGCTTGGGTTGTTTTCTTTGTACCTGAAAGTGATTCTGACATTGTATTCTACAATGAATTCATGCACTATCTCGGTGAAAAGCAACGAGCAGCTGTTGCCAAGTTGGATGACAGAACCACCTTGTTTCTTGTACCACCATCTGAGTTCTCAGAAAAAGTGCTCAAAGTACCAGGTAAATTGAGCATTTCAGGGGTAGTTCTGAGGTTAGAGCGTCCTGGTAGCATTGCAAGGCCTCCTCCTTATCAAAACGAAACAAAAGACACAAACTTGTTACCTTTACATAGCGAAACAGTATATACAAAATTACCTACGCCTCCAGCTGGTTTTGCCCCTGTATCATCTTTATCTGATCTCAGTAAATCAGGCATCAATAATACATCCTTGCATAGGAATGTCGCTACTTCAGCTTCACCTGTGTTATTTCGTGGTTCAGCCCAATCTGTTGGAAGTTTGTCTGACCAATATATTGAGAACAGACATGAGTATCCAAATCAACAACAGCAAAATGCCATGGGACCTAACTCAACTTCTCACCATCTACAGAATTCAATGTTGGATATTCGAAATATTCAGCCACAAGCTTCCAACAATTCAATGGATCCTGTTATTCAAGAACGTCATTTTGTCATTCCTAGGGAAATTCAGGAAACAGGCTCCAGTAATTATACCGTTGGAAATTCTACTGTTACATCTGGAAACGCTTTATCAACTCAACAAGAAATAAAGCCAGCAGCCTCTTTGGCTACGACTCTTTCCTCCCTACCGCCAGACCAACTGGCACAATTAGCATCATCTCTGCTTGGGCATCAAAGGCAGCCGGGGAGTATGTCGAATGTAACCATGGCTGAAGAATTGAGGCAGCGGAACTTGGTCAATGAATCTGTTGTGCCATTGGCAAGGTCTCAAAATGGTTCTTTCCAGAATAGTCTGATGAACTCTGAGCCTCAGACATCCCAAATGGTTCAAGTTCCACAGATACAGCATGTACAACAACACCAGATGTCGAACGTGACTGCTGGGCAGCTTATGGCACAAAGAGACCTTCAGACAGGGGCTTTAGGCAATAATCATCAGCAAGTACAAAACTCTGATGCGCGTGGGGAAGGAGAAGCAGATCCGCAGAAACGCCTCCAAGCTACGCTTCAGCTGGCAGCTGCTCTTCTCCAGCAAATTCAACAAGGAAAAGGAAATTGATCAGTCTCGCTTGATCATGTGAAATAAACTAATGTGGAGTTCCACAACAATGGGATAGTCATCCTACAGATGATGTGAAGGAATTAACATCTCCCAAGGGGGGAAATAACGAATGCAGAGCATGCATCATCAGCTACTTTGCCAGCGCTAATATTTGTTATCCTAAGTAACAAGTCTCTTTTTCTATTATTATTTTTATTTTTCTAATTTGTTTATAAGATGTTCGATTAGCTAGTTAGTTAGTAGCCCACAGCTTGCTGGTCTGATGCTATTAGAAACAGGAGGCATTTATGGTAGTATTGCTATTTTGTTTAATTCCCATTTTGAAATTTTGTTGTTCTTTCTTTATTTTGTTCCTTAGTAACTATAACTTGGGGAGGAGAGTTCCACTTCGTTGGGTCAACCATTTTCTCATACTGGCCGATCATATGATGTTTCGTAAAACTGTGAATGTGATGATGGGTTTGGCTAGAAATTATGTATGATATTGAAGTTCAGTTCTTGGTTTTGCTGGAATCTTTCCCAAGAATGCCACATTTTTAGTAGATGAGAAAGGGAAGTTCCAAAATGATGAATAATAATAGTCAAAATGCAACAAAT

Coding sequence (CDS)

ATGTCGGGCCGGGTTGATGGGGGAAGGGATCGATATCGTAAAGATTATACGTCGAGATATGACGAGAAGTTGCAGTCTGGGCATAGCAATAACAGCAATCCTCCGTCGAGACATCTCTGGGTGGGAAATTTGTCTCATGTTGTAGTGGAGCGTGATCTAAGCCGCTACTTTTCACAGTTTGGAGAGCTCGACAGTATTGCTTTCCAGCCCAGTAGGAGCTATGCTTTCATCAATTTCAAAAGGGATGAAGATGCAATGGCAGCCATCAGAGAGCTTCAAGGTTTTGCTCTTGGAGGGAATCCCATTAGAATTGAGTTTGCCAAGGCGGATAAGCCATCTGCATTGTCACGCGATGAAGACTATTCTCAACATCGAGAGGAAAAATATTATGGAGCAAGGGGTTCCTTCGCACAGGGACGACATGCTAGTCCTGACCAATTTTATCCTGAAAAGTCCAAAATGAGCGATAAAAATACAGAGCCCAGTGAAGTGTTATGGATAGGATTTCCAGCTTTGTTAAAAGTGGATGAAATGATATTAAGGAAGGCCTTTTCACCGTTTGGGGAAATTGATAAGATTACAACATTCCCTGGGCGGACATATGCTTTCGTTCGTTTTCGGGGTGTGGCATCAGCGTGGAGGGCTAAAGAGACTCTACAGGGGAAACTATTTGGAAATCCCCGAGTACATATTTGTTTTGCAAAAAATGATTCTGGTTCATCAAACGGTGGAAGGAGCTCAATGAATGCACCTCTTTCTCCAAGATCTCCTCACCTTTTCTCAAACTTTGATTCTGGAGATTTTGATTCCCGTGGTCTTAATAGGAAAAGTAATTTATGGACTAGTGGGAACAATACGTTTGAAATGAAGAGGTCTGGAGAATTCTCATCAAAATTAGGTCCATCCCAAGATAGGTATGAACATGGTAGTCCAACAAAAGAGAGAGGTCCTCCTTTAAATAACTTTCCTCAAAGTAACTTTCCTCAAAGATTTCCTCAACCTAGTCCATTTTATGAAGATCCATGGGACTTGCCGGAGGATACAAACTTGTATCATGGGTCCAAGAAATTGAAGACTGGACCCTTTCCCCAGGATAAAGAGCTCCCTGAGTACCCATTATCTGATTTGGAACAAGATAAACGTATTATTCCAAAGTTATACCCTGATTTTCCCCCATCAGAAACCTTTGATAAGAAGATGAAGTCTGGGCCACCTCTGGGGTATAAACAGACTCCGGATCGGCCTATAACAATGCCTGTCCCTTATGGGGAAAAGAGTGAACAGTGGAGGGAACCATATGATAATTTTCAGGATCCTGATTTTCTGCCACCCAATGCTGCTGCAAGGAAAAGGTTCTCTCCTGATTCAGAACAGTCATCTGTAAAAGAGTGGAAATGGGAAGGAACTATTGCAAAGGGTGGAACACCTGTTTGTCGTGCTCGCTGCTTTCCTGTGGGAAAGATTCTGGATATGCTGTTGCCAGAGTTCTTAGATTGTACTGCAAGAACTGGTCTAGACATGCTTTCAAAGCATTACTATGAAGCAGCTAGTGCTTGGGTTGTTTTCTTTGTACCTGAAAGTGATTCTGACATTGTATTCTACAATGAATTCATGCACTATCTCGGTGAAAAGCAACGAGCAGCTGTTGCCAAGTTGGATGACAGAACCACCTTGTTTCTTGTACCACCATCTGAGTTCTCAGAAAAAGTGCTCAAAGTACCAGGTAAATTGAGCATTTCAGGGGTAGTTCTGAGGTTAGAGCGTCCTGGTAGCATTGCAAGGCCTCCTCCTTATCAAAACGAAACAAAAGACACAAACTTGTTACCTTTACATAGCGAAACAGTATATACAAAATTACCTACGCCTCCAGCTGGTTTTGCCCCTGTATCATCTTTATCTGATCTCAGTAAATCAGGCATCAATAATACATCCTTGCATAGGAATGTCGCTACTTCAGCTTCACCTGTGTTATTTCGTGGTTCAGCCCAATCTGTTGGAAGTTTGTCTGACCAATATATTGAGAACAGACATGAGTATCCAAATCAACAACAGCAAAATGCCATGGGACCTAACTCAACTTCTCACCATCTACAGAATTCAATGTTGGATATTCGAAATATTCAGCCACAAGCTTCCAACAATTCAATGGATCCTGTTATTCAAGAACGTCATTTTGTCATTCCTAGGGAAATTCAGGAAACAGGCTCCAGTAATTATACCGTTGGAAATTCTACTGTTACATCTGGAAACGCTTTATCAACTCAACAAGAAATAAAGCCAGCAGCCTCTTTGGCTACGACTCTTTCCTCCCTACCGCCAGACCAACTGGCACAATTAGCATCATCTCTGCTTGGGCATCAAAGGCAGCCGGGGAGTATGTCGAATGTAACCATGGCTGAAGAATTGAGGCAGCGGAACTTGGTCAATGAATCTGTTGTGCCATTGGCAAGGTCTCAAAATGGTTCTTTCCAGAATAGTCTGATGAACTCTGAGCCTCAGACATCCCAAATGGTTCAAGTTCCACAGATACAGCATGTACAACAACACCAGATGTCGAACGTGACTGCTGGGCAGCTTATGGCACAAAGAGACCTTCAGACAGGGGCTTTAGGCAATAATCATCAGCAAGTACAAAACTCTGATGCGCGTGGGGAAGGAGAAGCAGATCCGCAGAAACGCCTCCAAGCTACGCTTCAGCTGGCAGCTGCTCTTCTCCAGCAAATTCAACAAGGAAAAGGAAATTGA

Protein sequence

MSGRVDGGRDRYRKDYTSRYDEKLQSGHSNNSNPPSRHLWVGNLSHVVVERDLSRYFSQFGELDSIAFQPSRSYAFINFKRDEDAMAAIRELQGFALGGNPIRIEFAKADKPSALSRDEDYSQHREEKYYGARGSFAQGRHASPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMILRKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGSSNGGRSSMNAPLSPRSPHLFSNFDSGDFDSRGLNRKSNLWTSGNNTFEMKRSGEFSSKLGPSQDRYEHGSPTKERGPPLNNFPQSNFPQRFPQPSPFYEDPWDLPEDTNLYHGSKKLKTGPFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGPPLGYKQTPDRPITMPVPYGEKSEQWREPYDNFQDPDFLPPNAAARKRFSPDSEQSSVKEWKWEGTIAKGGTPVCRARCFPVGKILDMLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMHYLGEKQRAAVAKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGSIARPPPYQNETKDTNLLPLHSETVYTKLPTPPAGFAPVSSLSDLSKSGINNTSLHRNVATSASPVLFRGSAQSVGSLSDQYIENRHEYPNQQQQNAMGPNSTSHHLQNSMLDIRNIQPQASNNSMDPVIQERHFVIPREIQETGSSNYTVGNSTVTSGNALSTQQEIKPAASLATTLSSLPPDQLAQLASSLLGHQRQPGSMSNVTMAEELRQRNLVNESVVPLARSQNGSFQNSLMNSEPQTSQMVQVPQIQHVQQHQMSNVTAGQLMAQRDLQTGALGNNHQQVQNSDARGEGEADPQKRLQATLQLAAALLQQIQQGKGN

Homology

[Close]

BLAST of Lsi10G000270 vs. ExPASy Swiss-Prot
Match: Q8LPQ9 (Flowering time control protein FPA OS=Arabidopsis thaliana OX=3702 GN=FPA PE=1 SV=2)

HSP 1 Score: 217.6 bits (553), Expect = 5.7e-55
Identity = 267/978 (27.30%), Postives = 385/978 (39.37%), Query Frame = 0


Query: 29  SNNSNPPSRHLWVGNLSHVVVERDLSRYFSQFGELDSIAFQPSRSYAFINFKRDEDAMAA 88
           +++S   S +LWVG+L+    E DL+  F ++G++D I    SR +AFI ++  E+A+AA
Sbjct: 10  ADDSGFQSNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAA 69

Query: 89  IRELQGFALGGNPIRIEFAKADKP----------------------SALSRDEDYSQHRE 148
              LQG  L G+ I+IE+A+  KP                      S   + ED+   RE
Sbjct: 70  KEALQGANLNGSQIKIEYARPAKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRE 129

Query: 149 EK-----YYG-------------------ARGSFAQGRHASPDQF--------------- 208
            K     YY                     R  F + +    +Q+               
Sbjct: 130 RKTAFIDYYEMDDALQAKSMNGKPMGGSFLRVDFLRSQAPKKEQWAGSYDNRNGNMNHKP 189

Query: 209 -YPEKSKMSDKNTEPSEVLWIGFP--ALLKVDEMILRKAFSPFGEIDKITTFPGRTYAFV 268
            YP   +    + +PS+VLWIGFP  A    DE IL  A   FGEI+++ ++P R +A V
Sbjct: 190 QYPHSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALV 249

Query: 269 RFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGSSNGGRSSMNAPLSPRSPHLFSNFD 328
            FR    A + KE LQG+LF NPR+ I ++              N  L P      ++F 
Sbjct: 250 EFRSAEEARQCKEGLQGRLFNNPRIKIMYS--------------NDELPPEQDD--TSFY 309

Query: 329 SGDFDSRGLNRKSNLWTSGNNTFEMKRSGEFSSKLGPSQDRYEHGSPTKERGPPLNNFPQ 388
           SG                      MKRS        PS     H +       PL    +
Sbjct: 310 SG----------------------MKRSRTDMFNNDPSFVSSPHSTGIPGSMRPLRGTNE 369

Query: 389 SNFPQRFPQPSPFYEDPWDLPEDTNLYHGSKKLKTG--PFPQDKELPEYPLSDLEQDKRI 448
            ++           E  W  P             TG  P P    +   P     +  R 
Sbjct: 370 RSYNGAEYNDVVGKEPNWRRPSANG---------TGILPSPTGPGILPSPAQGTRRPMRS 429

Query: 449 IPKLYPDFPPSETFDKKMKSGPPLGYKQTPDRPITMPVPYGEKSEQWREPYDNFQDPDFL 508
            P  +  + P++   +  ++          D  +    P G              +  F 
Sbjct: 430 NPDSWEGYDPAQLVRESKRT--------RRDGSVDGFTPMG------------VDERSFG 489

Query: 509 PPNAAARK-RFSPDSEQSSVKEWKWEGTIAKGGTPVCRARCFPVGKILDMLLPEFLDCTA 568
             + AAR  R  PDS+        W G IAKGGTPVC ARC P+GK ++  LPE ++C+A
Sbjct: 490 RGSVAARPIRGPPDSDHI------WRGMIAKGGTPVCCARCVPMGKGIETKLPEVVNCSA 549

Query: 569 RTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMHYLGEKQRAAVAKLDDRTTLFLV 628
           RT L+ML+KHY  A    +VFFVP+ + D   Y EF+ YL  K RA VAKLDD TTLFLV
Sbjct: 550 RTDLNMLAKHYAVAIGCEIVFFVPDREEDFASYTEFLRYLSSKDRAGVAKLDDGTTLFLV 609

Query: 629 PPSEFSEKVLKVPGKLSISGVVLRLERPGSIARPPPYQNETKDTNLLPLHSETVYTKLPT 688
           PPS+F   VL+V  +  + GVVL+L  P ++     Y+ E++     PLH          
Sbjct: 610 PPSDFLTDVLQVTRQERLYGVVLKLP-PPAVPVTASYRQESQSN---PLHY--------M 669

Query: 689 PPAGFAPVSSLSDLSKSGINNTSLHRNVATSASPVLFRGSAQSVGSLSDQYIENRHEYPN 748
             A  +P ++   L     N                 RG+ + + + S   +      PN
Sbjct: 670 DQARDSPANASHSLYPPREN---------------YIRGAPEHLTAASKPSVSEPLRIPN 729

Query: 749 QQQQNAMGPNSTSHHLQNSMLDIRNIQPQASNNSMDP------VIQERHFVIPREIQETG 808
                A G + T   L      +      A+  S  P      V+   H        E  
Sbjct: 730 NAAPQA-GVSLTPELLATLASILPATSQPAAPESHQPMSGPSTVVSTAHQSNGLYNGEAP 789

Query: 809 SSNYTVGNSTVTSGNALSTQQ---EIKPAASLATTLSSLPPDQLAQLASSLLGHQRQPGS 868
           S  +  G  TV   +  S QQ   +  PA  L    S  PP       +S + H      
Sbjct: 790 SQAWKRGPQTVHDASNQSFQQYGNQYTPAGQLPPPPSRYPPASNNPNYTSGMVHGNMQYQ 849

Query: 869 MSNVTMAEELRQRNLV--NESVVPLARSQNGSFQNSLMNSEPQTSQMVQ----VPQIQHV 911
             +V M +     N+   N S+     S +   Q  +   +P+ S   Q    +P  Q  
Sbjct: 850 SQSVNMPQLSPLPNMPHNNYSMYTQGSSNHPVSQPMVQQYQPEASMPNQNYGPIPSYQQA 886

[Close]

BLAST of Lsi10G000270 vs. ExPASy Swiss-Prot
Match: P08579 (U2 small nuclear ribonucleoprotein B'' OS=Homo sapiens OX=9606 GN=SNRPB2 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.5e-10
Identity = 61/222 (27.48%), Postives = 102/222 (45.95%), Query Frame = 0


Query: 35  PSRHLWVGNLSHVVVERDLSR----YFSQFGE-LDSIAFQ--PSRSYAFINFKRDEDAMA 94
           P+  +++ N++  + + +L R     FSQFG  +D +A +    R  AF+ FK    +  
Sbjct: 5   PNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELGSSTN 64

Query: 95  AIRELQGFALGGNPIRIEFAKADK---PSALSRDEDYSQHREEKYYGARGSFAQGRHASP 154
           A+R+LQGF   G P+RI++AK D            D  + +E+K        A   +  P
Sbjct: 65  ALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKKKEKKKAKTVEQTATTTNKKP 124

Query: 155 DQFYPEKSKMSDKNT--------EPSEVLWI-GFPALLKVDEMILRKAFSPFGEIDKITT 214
            Q  P  +     +T         P+ +L++   P   + +EM+L   F+ F    ++  
Sbjct: 125 GQGTPNSANTQGNSTPNPQVPDYPPNYILFLNNLPE--ETNEMMLSMLFNQFPGFKEVRL 184

Query: 215 FPGR-TYAFVRFRGVASAWRAKETLQG-KLFGNPRVHICFAK 236
            PGR   AFV F     A  A++ LQG K+  +  + I +AK
Sbjct: 185 VPGRHDIAFVEFENDGQAGAARDALQGFKITPSHAMKITYAK 224

[Close]

BLAST of Lsi10G000270 vs. ExPASy Swiss-Prot
Match: P31483 (Nucleolysin TIA-1 isoform p40 OS=Homo sapiens OX=9606 GN=TIA1 PE=1 SV=3)

HSP 1 Score: 69.3 bits (168), Expect = 2.5e-10
Identity = 53/190 (27.89%), Postives = 83/190 (43.68%), Query Frame = 0


Query: 38  HLWVGNLSHVVVERDLSRYFSQFGELD------SIAFQPSRSYAFINFKRDEDAMAAIRE 97
           H++VG+LS  +   D+   F+ FG +        +A   S+ Y F++F    DA  AI++
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166

Query: 98  LQGFALGGNPIRIEFAKADKPSALSRDEDYSQHREEKYYGARGSFAQGRHASPDQFYPEK 157
           + G  LGG  IR  +A    P+  S  E                 +  +  S D+   + 
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYE-----------------SNTKQLSYDEVVNQS 226

Query: 158 SKMSDKNTEPSEVLWIGFPALLKVDEMILRKAFSPFGEIDKITTFPGRTYAFVRFRGVAS 217
           S        PS            + E ++R+ FSPFG+I +I  FP + Y+FVRF    S
Sbjct: 227 S--------PSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHES 271

Query: 218 AWRAKETLQG 222
           A  A  ++ G
Sbjct: 287 AAHAIVSVNG 271

[Close]

BLAST of Lsi10G000270 vs. ExPASy Swiss-Prot
Match: P52912 (Nucleolysin TIA-1 OS=Mus musculus OX=10090 GN=Tia1 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.3e-10
Identity = 55/190 (28.95%), Postives = 83/190 (43.68%), Query Frame = 0


Query: 38  HLWVGNLSHVVVERDLSRYFSQFGELD------SIAFQPSRSYAFINFKRDEDAMAAIRE 97
           H++VG+LS  +   D+   F+ FG +        +A   S+ Y F++F    DA  AI++
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166

Query: 98  LQGFALGGNPIRIEFAKADKPSALSRDEDYSQHREEKYYGARGSFAQGRHASPDQFYPEK 157
           + G  LGG  IR  +A    P+  S  E  ++                        Y E 
Sbjct: 167 MGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLS---------------------YDEV 226

Query: 158 SKMSDKNTEPSEVLWIGFPALLKVDEMILRKAFSPFGEIDKITTFPGRTYAFVRFRGVAS 217
              S  N     V   G  + L   E ++R+ FSPFG+I +I  FP + Y+FVRF    S
Sbjct: 227 VSQSSPNN--CTVYCGGVTSGL--TEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHES 271

Query: 218 AWRAKETLQG 222
           A  A  ++ G
Sbjct: 287 AAHAIVSVNG 271

[Close]

BLAST of Lsi10G000270 vs. ExPASy Swiss-Prot
Match: Q01085 (Nucleolysin TIAR OS=Homo sapiens OX=9606 GN=TIAL1 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 7.3e-10
Identity = 54/190 (28.42%), Postives = 87/190 (45.79%), Query Frame = 0


Query: 38  HLWVGNLSHVVVERDLSRYFSQFGELD------SIAFQPSRSYAFINFKRDEDAMAAIRE 97
           H++VG+LS  +   D+   F+ FG++        +A   S+ Y F++F    DA  AI  
Sbjct: 98  HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 157

Query: 98  LQGFALGGNPIRIEFAKADKPSALSRDEDYSQHREEKYYGARGSFAQGRHASPDQFYPEK 157
           + G  LGG  IR  +A    P+  S  E+ ++                      +F    
Sbjct: 158 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQL--------------------RFEDVV 217

Query: 158 SKMSDKNTEPSEVLWIGFPALLKVDEMILRKAFSPFGEIDKITTFPGRTYAFVRFRGVAS 217
           ++ S KN      ++ G  A    D+ ++R+ FSPFG+I +I  FP + Y+FVRF    S
Sbjct: 218 NQSSPKNC----TVYCGGIASGLTDQ-LMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHES 262

Query: 218 AWRAKETLQG 222
           A  A  ++ G
Sbjct: 278 AAHAIVSVNG 262

[Close]

BLAST of Lsi10G000270 vs. ExPASy TrEMBL
Match: A0A0A0KA84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G115600 PE=4 SV=1)

HSP 1 Score: 1631.7 bits (4224), Expect = 0.0e+00
Identity = 822/914 (89.93%), Postives = 851/914 (93.11%), Query Frame = 0


Query: 1   MSGRVDGGRDRYRKDYTSRYDEKLQSGHSNNSNPPSRHLWVGNLSHVVVERDLSRYFSQF 60
           MSGRVDGGRDRYRKDYTSR+DEK QSGHSN+SNPPSRHLWVGNL+HVVVERDLSRYFSQF
Sbjct: 1   MSGRVDGGRDRYRKDYTSRFDEKPQSGHSNSSNPPSRHLWVGNLAHVVVERDLSRYFSQF 60

Query: 61  GELDSIAFQPSRSYAFINFKRDEDAMAAIRELQGFALGGNPIRIEFAKADKPSALSRDED 120
           GELDSIAFQPSRSYAF+NFKRDEDAMAA+RELQGF+LGGNPI+IEF KADKPSA SRDED
Sbjct: 61  GELDSIAFQPSRSYAFVNFKRDEDAMAAMRELQGFSLGGNPIKIEFTKADKPSASSRDED 120

Query: 121 YSQHREEKYYGARGSFAQGRHASPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL 180
           YSQHREEKYYGARGSF+QGRH SPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL
Sbjct: 121 YSQHREEKYYGARGSFSQGRHVSPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL 180

Query: 181 RKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGS 240
           RKAFSPFGEIDKITTFPGRTYAFVRFRGV SAWRAKETLQGKLFGNPRVHICFAKNDSGS
Sbjct: 181 RKAFSPFGEIDKITTFPGRTYAFVRFRGVTSAWRAKETLQGKLFGNPRVHICFAKNDSGS 240

Query: 241 SNGGRSSMNAPLSPRSPHLFSNFDSGDFDSRGLNRKSNLWTSGNNTFEMKRSGEFSSKLG 300
           SNGGRSS+NAPLSPRSPHLFSN DSGDFDSRGLNRKSNLWTSGNN FEMKRSGE SSKLG
Sbjct: 241 SNGGRSSINAPLSPRSPHLFSNMDSGDFDSRGLNRKSNLWTSGNNVFEMKRSGEISSKLG 300

Query: 301 PSQDRYEHGSPTKERGPPLNNFPQSNFPQRFPQPSPFYEDPWDLPEDTNLYHGSKKLKTG 360
           PS DRYEHGSPTKERGPPLN     NFPQRFPQPSPFY+DPWDLPED NLYHGSKKLKTG
Sbjct: 301 PSLDRYEHGSPTKERGPPLN-----NFPQRFPQPSPFYDDPWDLPEDMNLYHGSKKLKTG 360

Query: 361 PFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGPPLGYKQTPDRPITMPV 420
           PFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSG PLGYKQTPDRPITMPV
Sbjct: 361 PFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGLPLGYKQTPDRPITMPV 420

Query: 421 PYGEKSEQWREPYDNFQDPDFLPPNAAARKRFSPDSEQSSVKEWKWEGTIAKGGTPVCRA 480
            YGEKSE WREPYDNFQDPDFLPPN  ARKRFSPDSEQSSVKEWKWEGTIAKGGTPVCRA
Sbjct: 421 SYGEKSEHWREPYDNFQDPDFLPPNDVARKRFSPDSEQSSVKEWKWEGTIAKGGTPVCRA 480

Query: 481 RCFPVGKILDMLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMHY 540
           RCFPVGK+LD+LLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVP+SDSDIVFYNEFMHY
Sbjct: 481 RCFPVGKVLDLLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPQSDSDIVFYNEFMHY 540

Query: 541 LGEKQRAAVAKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGSIARPPPYQN 600
           LGEKQRAAV+KLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPG+IARPPPYQN
Sbjct: 541 LGEKQRAAVSKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGAIARPPPYQN 600

Query: 601 ETKDTNLLPLHSETVYTKLPTPPAGFAPVSSLSDLSKSGINNTSLHRNVATSASPVLFRG 660
           ETKD NLLPLHSET+YTKLPTPPA F PVS LSD SKSGIN+T L RNVATSASPVLF G
Sbjct: 601 ETKDANLLPLHSETLYTKLPTPPARFGPVSPLSDFSKSGINSTPLPRNVATSASPVLFHG 660

Query: 661 SAQSVGSLSDQYIENRHEYPNQQQQNAMGPNSTSHHLQNSMLDIRNIQPQASNNSMDPVI 720
           SAQS GSLSDQY++NRHEYP QQQQNAMGPN+TSHHLQNSMLDIRNI PQ SNNSMDP I
Sbjct: 661 SAQSAGSLSDQYVDNRHEYPIQQQQNAMGPNATSHHLQNSMLDIRNIHPQPSNNSMDPAI 720

Query: 721 QERHFVIPREIQETGSSNYTVGNSTVTSGNALSTQQEIKPAASLATTLSSLPPDQLAQLA 780
           QERH V  REI+ETGSSNY           ALSTQQE+KPAASLATTLSSLPPDQLAQLA
Sbjct: 721 QERHLVDLREIRETGSSNY-----------ALSTQQEMKPAASLATTLSSLPPDQLAQLA 780

Query: 781 SSLLGHQRQPGSMSNVTMAEELRQRNLVNESVVPLARSQNGSFQNSLMNSEPQTSQMVQV 840
           SSLLG QRQP +MS  TM EELRQRN VNESVVPL+R  N  FQN+LMNSEPQTSQ+VQV
Sbjct: 781 SSLLGQQRQPANMSIATMTEELRQRNSVNESVVPLSRYPNVHFQNNLMNSEPQTSQIVQV 840

Query: 841 PQIQHVQQHQMSNVTAGQLMAQRDLQTGALGNNHQQVQNSDARGEGEADPQKRLQATLQL 900
           PQIQHVQQHQM N T GQLMAQR++Q+ ALGNNHQQVQNSD RGE EADPQKRLQATLQL
Sbjct: 841 PQIQHVQQHQMLNATGGQLMAQREVQSEALGNNHQQVQNSDVRGEAEADPQKRLQATLQL 898

Query: 901 AAALLQQIQQGKGN 915
           AAALLQQIQQGKGN
Sbjct: 901 AAALLQQIQQGKGN 898

[Close]

BLAST of Lsi10G000270 vs. ExPASy TrEMBL
Match: A0A5D3BPF5 (Flowering time control protein FPA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G001090 PE=4 SV=1)

HSP 1 Score: 1596.6 bits (4133), Expect = 0.0e+00
Identity = 812/914 (88.84%), Postives = 843/914 (92.23%), Query Frame = 0


Query: 1   MSGRVDGGRDRYRKDYTSRYDEKLQSGHSNNSNPPSRHLWVGNLSHVVVERDLSRYFSQF 60
           MSGRVDGGRDRYRKDY SR+DEK QSGHSN+SNPPSRHLWVGNL+HVVVERDLSRYFSQF
Sbjct: 1   MSGRVDGGRDRYRKDYMSRFDEKPQSGHSNSSNPPSRHLWVGNLAHVVVERDLSRYFSQF 60

Query: 61  GELDSIAFQPSRSYAFINFKRDEDAMAAIRELQGFALGGNPIRIEFAKADKPSALSRDED 120
           GELDSIAFQPSRSYAFINFKRDEDAMAA+RELQGF+LGGNPI+IEF KADKPSA SRDED
Sbjct: 61  GELDSIAFQPSRSYAFINFKRDEDAMAAMRELQGFSLGGNPIKIEFTKADKPSASSRDED 120

Query: 121 YSQHREEKYYGARGSFAQGRHASPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL 180
           YSQHREEKYYGARGSF+QGRH SPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL
Sbjct: 121 YSQHREEKYYGARGSFSQGRHVSPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL 180

Query: 181 RKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGS 240
           RKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGS
Sbjct: 181 RKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGS 240

Query: 241 SNGGRSSMNAPLSPRSPHLFSNFDSGDFDSRGLNRKSNLWTSGNNTFEMKRSGEFSSKLG 300
           SNGGRSS+NAPLSPRSPHLFSN DSGDFDSRG NRKSNLWTSGNN FE+KRSGEFSSKLG
Sbjct: 241 SNGGRSSINAPLSPRSPHLFSNMDSGDFDSRGFNRKSNLWTSGNNGFEIKRSGEFSSKLG 300

Query: 301 PSQDRYEHGSPTKERGPPLNNFPQSNFPQRFPQPSPFYEDPWDLPEDTNLYHGSKKLKTG 360
           PS DRYEHGSPTKERG      P +NFPQR PQPSPFY+DPWDLPED NLYHGSKKLKTG
Sbjct: 301 PSLDRYEHGSPTKERG------PLNNFPQRLPQPSPFYDDPWDLPEDMNLYHGSKKLKTG 360

Query: 361 PFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGPPLGYKQTPDRPITMPV 420
            FPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSG PLGYKQTPDRPITMPV
Sbjct: 361 AFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGLPLGYKQTPDRPITMPV 420

Query: 421 PYGEKSEQWREPYDNFQDPDFLPPNAAARKRFSPDSEQSSVKEWKWEGTIAKGGTPVCRA 480
            YGEKSE WREPYDNFQDPDFLPPN  ARKRFSPDSEQS+VKEWKWEGTIAKGGTPVCRA
Sbjct: 421 SYGEKSEHWREPYDNFQDPDFLPPNDVARKRFSPDSEQSTVKEWKWEGTIAKGGTPVCRA 480

Query: 481 RCFPVGKILDMLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMHY 540
           RCFPVGK+LD+LLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIV YNEFMHY
Sbjct: 481 RCFPVGKVLDILLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVLYNEFMHY 540

Query: 541 LGEKQRAAVAKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGSIARPPPYQN 600
           LGEKQRAAV+KLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPG+I RPPPYQN
Sbjct: 541 LGEKQRAAVSKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGAITRPPPYQN 600

Query: 601 ETKDTNLLPLHSETVYTKLPTPPAGFAPVSSLSDLSKSGINNTSLHRNVATSASPVLFRG 660
           ETKD NLLPLHSET+YTKLP PPA F PVS LSDLSKSGIN+T L RNVATSASPVLF G
Sbjct: 601 ETKDANLLPLHSETLYTKLPVPPARFGPVSPLSDLSKSGINSTPLPRNVATSASPVLFHG 660

Query: 661 SAQSVGSLSDQYIENRHEYPNQQQQNAMGPNSTSHHLQNSMLDIRNIQPQASNNSMDPVI 720
           SAQS GSLSDQY++NRHEY + QQQNAMGPNS+S +LQNSMLDIRNIQPQ SNNSMD VI
Sbjct: 661 SAQSAGSLSDQYVDNRHEY-SIQQQNAMGPNSSSLNLQNSMLDIRNIQPQPSNNSMDSVI 720

Query: 721 QERHFVIPREIQETGSSNYTVGNSTVTSGNALSTQQEIKPAASLATTLSSLPPDQLAQLA 780
           QERHFV  REI+ETGSSNYT           LSTQQE+KPAASLATTLSSLPPDQLAQLA
Sbjct: 721 QERHFVDLREIRETGSSNYT-----------LSTQQEMKPAASLATTLSSLPPDQLAQLA 780

Query: 781 SSLLGHQRQPGSMSNVTMAEELRQRNLVNESVVPLARSQNGSFQNSLMNSEPQTSQMVQV 840
           SSLLG QRQ  +MSN TM EELRQRN VNESVVPLAR QN  FQ +LMNSEPQTSQ+VQ 
Sbjct: 781 SSLLGQQRQTANMSNATMTEELRQRNSVNESVVPLARYQNVPFQINLMNSEPQTSQIVQA 840

Query: 841 PQIQHVQQHQMSNVTAGQLMAQRDLQTGALGNNHQQVQNSDARGEGEADPQKRLQATLQL 900
           P IQHVQQHQM N T GQLMAQR++QT ALGNNHQ+VQNSD RGE EADPQKRLQATLQL
Sbjct: 841 PHIQHVQQHQMLNATGGQLMAQREVQTEALGNNHQEVQNSDVRGEAEADPQKRLQATLQL 896

Query: 901 AAALLQQIQQGKGN 915
           AAALLQQIQQGKGN
Sbjct: 901 AAALLQQIQQGKGN 896

[Close]

BLAST of Lsi10G000270 vs. ExPASy TrEMBL
Match: A0A1S3BJL6 (flowering time control protein FPA OS=Cucumis melo OX=3656 GN=LOC103490426 PE=4 SV=1)

HSP 1 Score: 1596.6 bits (4133), Expect = 0.0e+00
Identity = 812/914 (88.84%), Postives = 843/914 (92.23%), Query Frame = 0


Query: 1   MSGRVDGGRDRYRKDYTSRYDEKLQSGHSNNSNPPSRHLWVGNLSHVVVERDLSRYFSQF 60
           MSGRVDGGRDRYRKDY SR+DEK QSGHSN+SNPPSRHLWVGNL+HVVVERDLSRYFSQF
Sbjct: 1   MSGRVDGGRDRYRKDYMSRFDEKPQSGHSNSSNPPSRHLWVGNLAHVVVERDLSRYFSQF 60

Query: 61  GELDSIAFQPSRSYAFINFKRDEDAMAAIRELQGFALGGNPIRIEFAKADKPSALSRDED 120
           GELDSIAFQPSRSYAFINFKRDEDAMAA+RELQGF+LGGNPI+IEF KADKPSA SRDED
Sbjct: 61  GELDSIAFQPSRSYAFINFKRDEDAMAAMRELQGFSLGGNPIKIEFTKADKPSASSRDED 120

Query: 121 YSQHREEKYYGARGSFAQGRHASPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL 180
           YSQHREEKYYGARGSF+QGRH SPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL
Sbjct: 121 YSQHREEKYYGARGSFSQGRHVSPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL 180

Query: 181 RKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGS 240
           RKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGS
Sbjct: 181 RKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGS 240

Query: 241 SNGGRSSMNAPLSPRSPHLFSNFDSGDFDSRGLNRKSNLWTSGNNTFEMKRSGEFSSKLG 300
           SNGGRSS+NAPLSPRSPHLFSN DSGDFDSRG NRKSNLWTSGNN FE+KRSGEFSSKLG
Sbjct: 241 SNGGRSSINAPLSPRSPHLFSNMDSGDFDSRGFNRKSNLWTSGNNGFEIKRSGEFSSKLG 300

Query: 301 PSQDRYEHGSPTKERGPPLNNFPQSNFPQRFPQPSPFYEDPWDLPEDTNLYHGSKKLKTG 360
           PS DRYEHGSPTKERG      P +NFPQR PQPSPFY+DPWDLPED NLYHGSKKLKTG
Sbjct: 301 PSLDRYEHGSPTKERG------PLNNFPQRLPQPSPFYDDPWDLPEDMNLYHGSKKLKTG 360

Query: 361 PFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGPPLGYKQTPDRPITMPV 420
            FPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSG PLGYKQTPDRPITMPV
Sbjct: 361 AFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGLPLGYKQTPDRPITMPV 420

Query: 421 PYGEKSEQWREPYDNFQDPDFLPPNAAARKRFSPDSEQSSVKEWKWEGTIAKGGTPVCRA 480
            YGEKSE WREPYDNFQDPDFLPPN  ARKRFSPDSEQS+VKEWKWEGTIAKGGTPVCRA
Sbjct: 421 SYGEKSEHWREPYDNFQDPDFLPPNDVARKRFSPDSEQSTVKEWKWEGTIAKGGTPVCRA 480

Query: 481 RCFPVGKILDMLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMHY 540
           RCFPVGK+LD+LLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIV YNEFMHY
Sbjct: 481 RCFPVGKVLDILLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVLYNEFMHY 540

Query: 541 LGEKQRAAVAKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGSIARPPPYQN 600
           LGEKQRAAV+KLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPG+I RPPPYQN
Sbjct: 541 LGEKQRAAVSKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGAITRPPPYQN 600

Query: 601 ETKDTNLLPLHSETVYTKLPTPPAGFAPVSSLSDLSKSGINNTSLHRNVATSASPVLFRG 660
           ETKD NLLPLHSET+YTKLP PPA F PVS LSDLSKSGIN+T L RNVATSASPVLF G
Sbjct: 601 ETKDANLLPLHSETLYTKLPVPPARFGPVSPLSDLSKSGINSTPLPRNVATSASPVLFHG 660

Query: 661 SAQSVGSLSDQYIENRHEYPNQQQQNAMGPNSTSHHLQNSMLDIRNIQPQASNNSMDPVI 720
           SAQS GSLSDQY++NRHEY + QQQNAMGPNS+S +LQNSMLDIRNIQPQ SNNSMD VI
Sbjct: 661 SAQSAGSLSDQYVDNRHEY-SIQQQNAMGPNSSSLNLQNSMLDIRNIQPQPSNNSMDSVI 720

Query: 721 QERHFVIPREIQETGSSNYTVGNSTVTSGNALSTQQEIKPAASLATTLSSLPPDQLAQLA 780
           QERHFV  REI+ETGSSNYT           LSTQQE+KPAASLATTLSSLPPDQLAQLA
Sbjct: 721 QERHFVDLREIRETGSSNYT-----------LSTQQEMKPAASLATTLSSLPPDQLAQLA 780

Query: 781 SSLLGHQRQPGSMSNVTMAEELRQRNLVNESVVPLARSQNGSFQNSLMNSEPQTSQMVQV 840
           SSLLG QRQ  +MSN TM EELRQRN VNESVVPLAR QN  FQ +LMNSEPQTSQ+VQ 
Sbjct: 781 SSLLGQQRQTANMSNATMTEELRQRNSVNESVVPLARYQNVPFQINLMNSEPQTSQIVQA 840

Query: 841 PQIQHVQQHQMSNVTAGQLMAQRDLQTGALGNNHQQVQNSDARGEGEADPQKRLQATLQL 900
           P IQHVQQHQM N T GQLMAQR++QT ALGNNHQ+VQNSD RGE EADPQKRLQATLQL
Sbjct: 841 PHIQHVQQHQMLNATGGQLMAQREVQTEALGNNHQEVQNSDVRGEAEADPQKRLQATLQL 896

Query: 901 AAALLQQIQQGKGN 915
           AAALLQQIQQGKGN
Sbjct: 901 AAALLQQIQQGKGN 896

[Close]

BLAST of Lsi10G000270 vs. ExPASy TrEMBL
Match: A0A5A7T5C2 (Flowering time control protein FPA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4533G00010 PE=4 SV=1)

HSP 1 Score: 1596.3 bits (4132), Expect = 0.0e+00
Identity = 812/914 (88.84%), Postives = 843/914 (92.23%), Query Frame = 0


Query: 1   MSGRVDGGRDRYRKDYTSRYDEKLQSGHSNNSNPPSRHLWVGNLSHVVVERDLSRYFSQF 60
           MSGRVDGGRDRYRKDY SR+DEK QSGHSN+SNPPSRHLWVGNL+HVVVERDLSRYFSQF
Sbjct: 1   MSGRVDGGRDRYRKDYMSRFDEKPQSGHSNSSNPPSRHLWVGNLAHVVVERDLSRYFSQF 60

Query: 61  GELDSIAFQPSRSYAFINFKRDEDAMAAIRELQGFALGGNPIRIEFAKADKPSALSRDED 120
           GELDSIAFQPSRSYAFINFKRDEDAMAA+RELQGF+LGGNPI+IEF KADKPSA SRDED
Sbjct: 61  GELDSIAFQPSRSYAFINFKRDEDAMAAMRELQGFSLGGNPIKIEFTKADKPSASSRDED 120

Query: 121 YSQHREEKYYGARGSFAQGRHASPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL 180
           YSQHREEKYYGARGSF+QGRH SPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL
Sbjct: 121 YSQHREEKYYGARGSFSQGRHVSPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL 180

Query: 181 RKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGS 240
           RKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGS
Sbjct: 181 RKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGS 240

Query: 241 SNGGRSSMNAPLSPRSPHLFSNFDSGDFDSRGLNRKSNLWTSGNNTFEMKRSGEFSSKLG 300
           SNGGRSS+NAPLSPRSPHLFSN DSGDFDSRG NRKSNLWTSGNN FE+KRSGEFSSKLG
Sbjct: 241 SNGGRSSINAPLSPRSPHLFSNMDSGDFDSRGFNRKSNLWTSGNNGFEIKRSGEFSSKLG 300

Query: 301 PSQDRYEHGSPTKERGPPLNNFPQSNFPQRFPQPSPFYEDPWDLPEDTNLYHGSKKLKTG 360
           PS DRYEHGSPTKERG      P +NFPQR PQPSPFY+DPWDLPED NLYHGSKKLKTG
Sbjct: 301 PSLDRYEHGSPTKERG------PLNNFPQRLPQPSPFYDDPWDLPEDMNLYHGSKKLKTG 360

Query: 361 PFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGPPLGYKQTPDRPITMPV 420
            FPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSG PLGYKQTPDRPITMPV
Sbjct: 361 AFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGLPLGYKQTPDRPITMPV 420

Query: 421 PYGEKSEQWREPYDNFQDPDFLPPNAAARKRFSPDSEQSSVKEWKWEGTIAKGGTPVCRA 480
            YGEKSE WREPYDNFQDPDFLPPN  ARKRFSPDSEQS+VKEWKWEGTIAKGGTPVCRA
Sbjct: 421 SYGEKSEHWREPYDNFQDPDFLPPNDVARKRFSPDSEQSTVKEWKWEGTIAKGGTPVCRA 480

Query: 481 RCFPVGKILDMLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMHY 540
           RCFPVGK+LD+LLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIV YNEFMHY
Sbjct: 481 RCFPVGKVLDILLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVLYNEFMHY 540

Query: 541 LGEKQRAAVAKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGSIARPPPYQN 600
           LGEKQRAAV+KLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPG+I RPPPYQN
Sbjct: 541 LGEKQRAAVSKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGAITRPPPYQN 600

Query: 601 ETKDTNLLPLHSETVYTKLPTPPAGFAPVSSLSDLSKSGINNTSLHRNVATSASPVLFRG 660
           ETKD NLLPLHSET+YTKLP PPA F PVS LSDLSKSGIN+T L RNVATSASPVLF G
Sbjct: 601 ETKDANLLPLHSETLYTKLPVPPARFGPVSPLSDLSKSGINSTPLPRNVATSASPVLFHG 660

Query: 661 SAQSVGSLSDQYIENRHEYPNQQQQNAMGPNSTSHHLQNSMLDIRNIQPQASNNSMDPVI 720
           SAQS GSLSDQY++ RHEY + QQQNAMGPNS+S +LQNSMLDIRNIQPQ SNNSMD VI
Sbjct: 661 SAQSAGSLSDQYVDIRHEY-SIQQQNAMGPNSSSLNLQNSMLDIRNIQPQPSNNSMDSVI 720

Query: 721 QERHFVIPREIQETGSSNYTVGNSTVTSGNALSTQQEIKPAASLATTLSSLPPDQLAQLA 780
           QERHFV  REI+ETGSSNYT           LSTQQE+KPAASLATTLSSLPPDQLAQLA
Sbjct: 721 QERHFVDLREIRETGSSNYT-----------LSTQQEMKPAASLATTLSSLPPDQLAQLA 780

Query: 781 SSLLGHQRQPGSMSNVTMAEELRQRNLVNESVVPLARSQNGSFQNSLMNSEPQTSQMVQV 840
           SSLLG QRQP +MSN TM EELRQRN VNESVVPLAR QN  FQ +LMNSEPQTSQ+VQ 
Sbjct: 781 SSLLGQQRQPANMSNATMTEELRQRNSVNESVVPLARYQNVPFQINLMNSEPQTSQIVQA 840

Query: 841 PQIQHVQQHQMSNVTAGQLMAQRDLQTGALGNNHQQVQNSDARGEGEADPQKRLQATLQL 900
           P IQHVQQHQM N T GQLMAQR++QT ALGNNHQ+VQNSD RGE EADPQKRLQATLQL
Sbjct: 841 PHIQHVQQHQMLNATGGQLMAQREVQTEALGNNHQEVQNSDVRGEAEADPQKRLQATLQL 896

Query: 901 AAALLQQIQQGKGN 915
           AAALLQQIQQGKGN
Sbjct: 901 AAALLQQIQQGKGN 896

[Close]

BLAST of Lsi10G000270 vs. ExPASy TrEMBL
Match: A0A6J1CF06 (flowering time control protein FPA OS=Momordica charantia OX=3673 GN=LOC111011091 PE=4 SV=1)

HSP 1 Score: 1557.7 bits (4032), Expect = 0.0e+00
Identity = 798/915 (87.21%), Postives = 845/915 (92.35%), Query Frame = 0


Query: 1   MSGRVDGGRDRYRKDYTSRYDEKLQSGHSNNSNPPSRHLWVGNLSHVVVERDLSRYFSQF 60
           MSGR DGGRDR+RKDYTSRYDE+ QS HS++SNPPSRHLW+GNLSHV+VERDL+R+FSQF
Sbjct: 1   MSGRADGGRDRFRKDYTSRYDERSQSTHSSSSNPPSRHLWIGNLSHVIVERDLTRHFSQF 60

Query: 61  GELDSIAFQPSRSYAFINFKRDEDAMAAIRELQGFALGGNPIRIEFAKADKPSALSRDED 120
           GELDSIAFQPSRSYAFINFKRDE+AMAA+R LQGFALGGNPIRIEFAKADKPSA SRDED
Sbjct: 61  GELDSIAFQPSRSYAFINFKRDEEAMAAMRGLQGFALGGNPIRIEFAKADKPSASSRDED 120

Query: 121 YSQHREEKYYGARGSFAQGRHASPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL 180
           YSQHREEKYYGA+GSF+QGRHASPDQFYPEKSKMSDKN+EPSEVLWIGFP+LLKVDEMIL
Sbjct: 121 YSQHREEKYYGAKGSFSQGRHASPDQFYPEKSKMSDKNSEPSEVLWIGFPSLLKVDEMIL 180

Query: 181 RKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGS 240
           RKAFSPFGEI+KITTFPGRTYAFVRFRGV SAWRAKETLQGKLFGNPRVHICFAKNDSGS
Sbjct: 181 RKAFSPFGEIEKITTFPGRTYAFVRFRGVTSAWRAKETLQGKLFGNPRVHICFAKNDSGS 240

Query: 241 SNGGRSSMNAPLSPRSPHLFSNFDSGDFDSRGLNRKSNLWTSGNNTFEMKRSGEFSSKLG 300
           SN GRSSMNAPLSPRSPHLFSNFD+G+FDSRG NRKSNLWTSGNN FEMKRSGEFSSKLG
Sbjct: 241 SNSGRSSMNAPLSPRSPHLFSNFDAGEFDSRGFNRKSNLWTSGNNAFEMKRSGEFSSKLG 300

Query: 301 PSQDRYE-HGSPTKERGPPLNNFPQSNFPQRFPQPSPFYEDPWDLPEDTNLYHGSKKLKT 360
           P  DRYE HGSPTKERGP LN     NFPQRF Q S FYEDPWDLPED+NLYHGSKKLKT
Sbjct: 301 PPGDRYEHHGSPTKERGPHLN-----NFPQRFSQQSSFYEDPWDLPEDSNLYHGSKKLKT 360

Query: 361 GPFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGPPLGYKQTPDRPITMP 420
           GPFPQDKELPEYPLSDLEQDKRIIPKLYPDF PSE  D KMKSG PLGYKQTPDRPITMP
Sbjct: 361 GPFPQDKELPEYPLSDLEQDKRIIPKLYPDFSPSEV-DMKMKSG-PLGYKQTPDRPITMP 420

Query: 421 VPYGEKSEQWREPYDNFQDPDFLPPNAAARKRFSPDSEQSSVKEWKWEGTIAKGGTPVCR 480
           VPYGE SE+WREPYDNFQ  D +P NA ARKR SPDSEQSS+KEWKWEGTIAKGGTPVCR
Sbjct: 421 VPYGENSERWREPYDNFQGSDSMPSNAVARKRLSPDSEQSSMKEWKWEGTIAKGGTPVCR 480

Query: 481 ARCFPVGKILDMLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMH 540
           ARCFPVGK+LDMLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMH
Sbjct: 481 ARCFPVGKVLDMLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMH 540

Query: 541 YLGEKQRAAVAKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGSIARPPPYQ 600
           YLGEKQRAAV+KLDDRTTLFLVPPSEFSEKVLKVPGKLSISGV+LRLERPG+ ARPPPYQ
Sbjct: 541 YLGEKQRAAVSKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVILRLERPGTSARPPPYQ 600

Query: 601 NETKDTNLLPLHSETVYTKLPTPPAGFAPVSSLSDLSKSGINNTSLHRNVATSASPVLFR 660
           NETKDTNLLPL  ET+Y KL T PA FAP+ +LSDLSKSGINN SL RNVAT+ASPVLF 
Sbjct: 601 NETKDTNLLPLQGETLYAKLATSPAVFAPIPTLSDLSKSGINNASLPRNVATTASPVLFH 660

Query: 661 GSAQSVGSLSDQYIENRHEYPNQQQQNAMGPNSTSHHLQNSMLDIRNIQPQASNNSMDPV 720
           GSAQS+GSLSD Y+E+R EYP QQQQNAMGPN +SHHL NSM+DIRNIQ QAS+NSMDPV
Sbjct: 661 GSAQSIGSLSDPYLESRSEYPIQQQQNAMGPNLSSHHL-NSMVDIRNIQSQASHNSMDPV 720

Query: 721 IQERHFVIPREIQETGSSNYTVGNSTVTSGNALSTQQEIKPAASLATTLSSLPPDQLAQL 780
           IQERH VIPREIQETGSSN+TVG S+V SGNALSTQQEIKPAASLATTLSSL P+QLA+L
Sbjct: 721 IQERHLVIPREIQETGSSNFTVGISSVPSGNALSTQQEIKPAASLATTLSSLQPEQLAEL 780

Query: 781 ASSLLGHQRQPGSMSNVTMAEELRQRNLVNESVVPLARSQNGSFQNSLMNSEPQTSQMVQ 840
           ASSLLGHQRQ GS SN TMAEELRQRNLV+E V+PLARSQNGSFQN++MNSEPQTSQ VQ
Sbjct: 781 ASSLLGHQRQFGSTSNATMAEELRQRNLVSEPVMPLARSQNGSFQNNVMNSEPQTSQNVQ 840

Query: 841 VPQIQHVQQHQMSNVTAGQLMAQRDLQTGALGNNHQQVQNSDARGEGEADPQKRLQATLQ 900
           VPQ+Q VQ  QMSNV  G +MAQR+ QTGALGNN Q VQNSD RGE EADPQKRLQATLQ
Sbjct: 841 VPQMQLVQHLQMSNVPDGHIMAQREPQTGALGNN-QHVQNSDVRGEAEADPQKRLQATLQ 900

Query: 901 LAAALLQQIQQGKGN 915
           LAAALLQQIQQGKG+
Sbjct: 901 LAAALLQQIQQGKGS 906

[Close]

BLAST of Lsi10G000270 vs. NCBI nr
Match: XP_038901035.1 (flowering time control protein FPA [Benincasa hispida])

HSP 1 Score: 1707.2 bits (4420), Expect = 0.0e+00
Identity = 863/915 (94.32%), Postives = 879/915 (96.07%), Query Frame = 0


Query: 1   MSGRVDGGRDRYRKDYTSRYDEKLQSGHSN-NSNPPSRHLWVGNLSHVVVERDLSRYFSQ 60
           MSGRVDGGRDRYRKDYTSRYD+K QSGHSN +SNPPSRHLWVGNL+HVVVERDLSRYFSQ
Sbjct: 1   MSGRVDGGRDRYRKDYTSRYDDKSQSGHSNTSSNPPSRHLWVGNLAHVVVERDLSRYFSQ 60

Query: 61  FGELDSIAFQPSRSYAFINFKRDEDAMAAIRELQGFALGGNPIRIEFAKADKPSALSRDE 120
           FGELDSIAFQPSRSYAFINFKRDEDAMAA+RELQGFALGGNPIRIEF KADKPSA S DE
Sbjct: 61  FGELDSIAFQPSRSYAFINFKRDEDAMAAMRELQGFALGGNPIRIEFTKADKPSASSCDE 120

Query: 121 DYSQHREEKYYGARGSFAQGRHASPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMI 180
           DYSQHRE+KYYGARGSF+QGRHASPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMI
Sbjct: 121 DYSQHREDKYYGARGSFSQGRHASPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMI 180

Query: 181 LRKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSG 240
           LRKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSG
Sbjct: 181 LRKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSG 240

Query: 241 SSNGGRSSMNAPLSPRSPHLFSNFDSGDFDSRGLNRKSNLWTSGNNTFEMKRSGEFSSKL 300
           SSNGGRSSMNAPLSPRSPHLFSNFDSGDFDSRGLNR  NLWTSGNN FEMKRSGEFSSKL
Sbjct: 241 SSNGGRSSMNAPLSPRSPHLFSNFDSGDFDSRGLNRNINLWTSGNNAFEMKRSGEFSSKL 300

Query: 301 GPSQDRYEHGSPTKERGPPLNNFPQSNFPQRFPQPSPFYEDPWDLPEDTNLYHGSKKLKT 360
           GPSQ RYEHGSPTKERGPPLN     NFPQRFPQPSPFYEDPWDLPEDTNLYHGSKKLKT
Sbjct: 301 GPSQGRYEHGSPTKERGPPLN-----NFPQRFPQPSPFYEDPWDLPEDTNLYHGSKKLKT 360

Query: 361 GPFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGPPLGYKQTPDRPITMP 420
           GPFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGPPLGYKQTPDRPITMP
Sbjct: 361 GPFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGPPLGYKQTPDRPITMP 420

Query: 421 VPYGEKSEQWREPYDNFQDPDFLPPNAAARKRFSPDSEQSSVKEWKWEGTIAKGGTPVCR 480
           VPYGEKSE WREPYDNFQDPDFLPPNA ARKRFSPDSEQSSVKEWKWEGTIAKGGTPVCR
Sbjct: 421 VPYGEKSEHWREPYDNFQDPDFLPPNAVARKRFSPDSEQSSVKEWKWEGTIAKGGTPVCR 480

Query: 481 ARCFPVGKILDMLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMH 540
           ARCFPVGK+LDMLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMH
Sbjct: 481 ARCFPVGKVLDMLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMH 540

Query: 541 YLGEKQRAAVAKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGSIARPPPYQ 600
           YLGEKQRAAVAKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPG+IARPPPYQ
Sbjct: 541 YLGEKQRAAVAKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGTIARPPPYQ 600

Query: 601 NETKDTNLLPLHSETVYTKLPTPPAGFAPVSSLSDLSKSGINNTSLHRNVATSASPVLFR 660
           NETKD NLLPLHSET+YTKLPTPPAGFAPVSSLSD SKSGINNTSL RNVATS SPVLF 
Sbjct: 601 NETKDANLLPLHSETLYTKLPTPPAGFAPVSSLSDPSKSGINNTSLPRNVATSPSPVLFH 660

Query: 661 GSAQSVGSLSDQYIENRHEYPNQQQQNAMGPNSTSHHLQNSMLDIRNIQPQASNNSMDPV 720
           GSAQSVG+LSDQYI+NRHEYP QQQQNAMGPNSTSHHLQNSMLDIRNIQPQ S NSMDPV
Sbjct: 661 GSAQSVGNLSDQYIDNRHEYPIQQQQNAMGPNSTSHHLQNSMLDIRNIQPQTSKNSMDPV 720

Query: 721 IQERHFVIPREIQETGSSNYTVGNSTVTSGNALSTQQEIKPAASLATTLSSLPPDQLAQL 780
           IQERHFVIPREIQETGSSNYTVG STVTSGNALSTQQEIKPAASLATTLSSLPPDQLAQL
Sbjct: 721 IQERHFVIPREIQETGSSNYTVGISTVTSGNALSTQQEIKPAASLATTLSSLPPDQLAQL 780

Query: 781 ASSLLGHQRQPGSMSNVTMAEELRQRNLVNESVVPLARSQNGSFQNSLMNSEPQTSQMVQ 840
           ASSLLGHQRQ GSM NVT AEE RQRNLV+ESVVPLARSQ GSFQN+LMNSEP TSQ+VQ
Sbjct: 781 ASSLLGHQRQLGSMLNVTTAEESRQRNLVDESVVPLARSQIGSFQNNLMNSEPHTSQIVQ 840

Query: 841 VPQIQHVQQHQMSNVTAGQLMAQRDLQTGALGNNHQQVQNSDARGEGEADPQKRLQATLQ 900
           VPQIQHVQQHQM N TAGQ+  QR+LQTGALGNNHQQVQNSDARGE EADPQKRLQATLQ
Sbjct: 841 VPQIQHVQQHQMLNATAGQITTQRELQTGALGNNHQQVQNSDARGEAEADPQKRLQATLQ 900

Query: 901 LAAALLQQIQQGKGN 915
           LAAALLQQIQQGKGN
Sbjct: 901 LAAALLQQIQQGKGN 910

[Close]

BLAST of Lsi10G000270 vs. NCBI nr
Match: XP_004140066.1 (flowering time control protein FPA isoform X1 [Cucumis sativus])

HSP 1 Score: 1631.7 bits (4224), Expect = 0.0e+00
Identity = 822/914 (89.93%), Postives = 851/914 (93.11%), Query Frame = 0


Query: 1   MSGRVDGGRDRYRKDYTSRYDEKLQSGHSNNSNPPSRHLWVGNLSHVVVERDLSRYFSQF 60
           MSGRVDGGRDRYRKDYTSR+DEK QSGHSN+SNPPSRHLWVGNL+HVVVERDLSRYFSQF
Sbjct: 1   MSGRVDGGRDRYRKDYTSRFDEKPQSGHSNSSNPPSRHLWVGNLAHVVVERDLSRYFSQF 60

Query: 61  GELDSIAFQPSRSYAFINFKRDEDAMAAIRELQGFALGGNPIRIEFAKADKPSALSRDED 120
           GELDSIAFQPSRSYAF+NFKRDEDAMAA+RELQGF+LGGNPI+IEF KADKPSA SRDED
Sbjct: 61  GELDSIAFQPSRSYAFVNFKRDEDAMAAMRELQGFSLGGNPIKIEFTKADKPSASSRDED 120

Query: 121 YSQHREEKYYGARGSFAQGRHASPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL 180
           YSQHREEKYYGARGSF+QGRH SPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL
Sbjct: 121 YSQHREEKYYGARGSFSQGRHVSPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL 180

Query: 181 RKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGS 240
           RKAFSPFGEIDKITTFPGRTYAFVRFRGV SAWRAKETLQGKLFGNPRVHICFAKNDSGS
Sbjct: 181 RKAFSPFGEIDKITTFPGRTYAFVRFRGVTSAWRAKETLQGKLFGNPRVHICFAKNDSGS 240

Query: 241 SNGGRSSMNAPLSPRSPHLFSNFDSGDFDSRGLNRKSNLWTSGNNTFEMKRSGEFSSKLG 300
           SNGGRSS+NAPLSPRSPHLFSN DSGDFDSRGLNRKSNLWTSGNN FEMKRSGE SSKLG
Sbjct: 241 SNGGRSSINAPLSPRSPHLFSNMDSGDFDSRGLNRKSNLWTSGNNVFEMKRSGEISSKLG 300

Query: 301 PSQDRYEHGSPTKERGPPLNNFPQSNFPQRFPQPSPFYEDPWDLPEDTNLYHGSKKLKTG 360
           PS DRYEHGSPTKERGPPLN     NFPQRFPQPSPFY+DPWDLPED NLYHGSKKLKTG
Sbjct: 301 PSLDRYEHGSPTKERGPPLN-----NFPQRFPQPSPFYDDPWDLPEDMNLYHGSKKLKTG 360

Query: 361 PFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGPPLGYKQTPDRPITMPV 420
           PFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSG PLGYKQTPDRPITMPV
Sbjct: 361 PFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGLPLGYKQTPDRPITMPV 420

Query: 421 PYGEKSEQWREPYDNFQDPDFLPPNAAARKRFSPDSEQSSVKEWKWEGTIAKGGTPVCRA 480
            YGEKSE WREPYDNFQDPDFLPPN  ARKRFSPDSEQSSVKEWKWEGTIAKGGTPVCRA
Sbjct: 421 SYGEKSEHWREPYDNFQDPDFLPPNDVARKRFSPDSEQSSVKEWKWEGTIAKGGTPVCRA 480

Query: 481 RCFPVGKILDMLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMHY 540
           RCFPVGK+LD+LLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVP+SDSDIVFYNEFMHY
Sbjct: 481 RCFPVGKVLDLLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPQSDSDIVFYNEFMHY 540

Query: 541 LGEKQRAAVAKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGSIARPPPYQN 600
           LGEKQRAAV+KLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPG+IARPPPYQN
Sbjct: 541 LGEKQRAAVSKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGAIARPPPYQN 600

Query: 601 ETKDTNLLPLHSETVYTKLPTPPAGFAPVSSLSDLSKSGINNTSLHRNVATSASPVLFRG 660
           ETKD NLLPLHSET+YTKLPTPPA F PVS LSD SKSGIN+T L RNVATSASPVLF G
Sbjct: 601 ETKDANLLPLHSETLYTKLPTPPARFGPVSPLSDFSKSGINSTPLPRNVATSASPVLFHG 660

Query: 661 SAQSVGSLSDQYIENRHEYPNQQQQNAMGPNSTSHHLQNSMLDIRNIQPQASNNSMDPVI 720
           SAQS GSLSDQY++NRHEYP QQQQNAMGPN+TSHHLQNSMLDIRNI PQ SNNSMDP I
Sbjct: 661 SAQSAGSLSDQYVDNRHEYPIQQQQNAMGPNATSHHLQNSMLDIRNIHPQPSNNSMDPAI 720

Query: 721 QERHFVIPREIQETGSSNYTVGNSTVTSGNALSTQQEIKPAASLATTLSSLPPDQLAQLA 780
           QERH V  REI+ETGSSNY           ALSTQQE+KPAASLATTLSSLPPDQLAQLA
Sbjct: 721 QERHLVDLREIRETGSSNY-----------ALSTQQEMKPAASLATTLSSLPPDQLAQLA 780

Query: 781 SSLLGHQRQPGSMSNVTMAEELRQRNLVNESVVPLARSQNGSFQNSLMNSEPQTSQMVQV 840
           SSLLG QRQP +MS  TM EELRQRN VNESVVPL+R  N  FQN+LMNSEPQTSQ+VQV
Sbjct: 781 SSLLGQQRQPANMSIATMTEELRQRNSVNESVVPLSRYPNVHFQNNLMNSEPQTSQIVQV 840

Query: 841 PQIQHVQQHQMSNVTAGQLMAQRDLQTGALGNNHQQVQNSDARGEGEADPQKRLQATLQL 900
           PQIQHVQQHQM N T GQLMAQR++Q+ ALGNNHQQVQNSD RGE EADPQKRLQATLQL
Sbjct: 841 PQIQHVQQHQMLNATGGQLMAQREVQSEALGNNHQQVQNSDVRGEAEADPQKRLQATLQL 898

Query: 901 AAALLQQIQQGKGN 915
           AAALLQQIQQGKGN
Sbjct: 901 AAALLQQIQQGKGN 898

[Close]

BLAST of Lsi10G000270 vs. NCBI nr
Match: XP_008448142.1 (PREDICTED: flowering time control protein FPA [Cucumis melo] >TYK01084.1 flowering time control protein FPA [Cucumis melo var. makuwa])

HSP 1 Score: 1596.6 bits (4133), Expect = 0.0e+00
Identity = 812/914 (88.84%), Postives = 843/914 (92.23%), Query Frame = 0


Query: 1   MSGRVDGGRDRYRKDYTSRYDEKLQSGHSNNSNPPSRHLWVGNLSHVVVERDLSRYFSQF 60
           MSGRVDGGRDRYRKDY SR+DEK QSGHSN+SNPPSRHLWVGNL+HVVVERDLSRYFSQF
Sbjct: 1   MSGRVDGGRDRYRKDYMSRFDEKPQSGHSNSSNPPSRHLWVGNLAHVVVERDLSRYFSQF 60

Query: 61  GELDSIAFQPSRSYAFINFKRDEDAMAAIRELQGFALGGNPIRIEFAKADKPSALSRDED 120
           GELDSIAFQPSRSYAFINFKRDEDAMAA+RELQGF+LGGNPI+IEF KADKPSA SRDED
Sbjct: 61  GELDSIAFQPSRSYAFINFKRDEDAMAAMRELQGFSLGGNPIKIEFTKADKPSASSRDED 120

Query: 121 YSQHREEKYYGARGSFAQGRHASPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL 180
           YSQHREEKYYGARGSF+QGRH SPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL
Sbjct: 121 YSQHREEKYYGARGSFSQGRHVSPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL 180

Query: 181 RKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGS 240
           RKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGS
Sbjct: 181 RKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGS 240

Query: 241 SNGGRSSMNAPLSPRSPHLFSNFDSGDFDSRGLNRKSNLWTSGNNTFEMKRSGEFSSKLG 300
           SNGGRSS+NAPLSPRSPHLFSN DSGDFDSRG NRKSNLWTSGNN FE+KRSGEFSSKLG
Sbjct: 241 SNGGRSSINAPLSPRSPHLFSNMDSGDFDSRGFNRKSNLWTSGNNGFEIKRSGEFSSKLG 300

Query: 301 PSQDRYEHGSPTKERGPPLNNFPQSNFPQRFPQPSPFYEDPWDLPEDTNLYHGSKKLKTG 360
           PS DRYEHGSPTKERG      P +NFPQR PQPSPFY+DPWDLPED NLYHGSKKLKTG
Sbjct: 301 PSLDRYEHGSPTKERG------PLNNFPQRLPQPSPFYDDPWDLPEDMNLYHGSKKLKTG 360

Query: 361 PFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGPPLGYKQTPDRPITMPV 420
            FPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSG PLGYKQTPDRPITMPV
Sbjct: 361 AFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGLPLGYKQTPDRPITMPV 420

Query: 421 PYGEKSEQWREPYDNFQDPDFLPPNAAARKRFSPDSEQSSVKEWKWEGTIAKGGTPVCRA 480
            YGEKSE WREPYDNFQDPDFLPPN  ARKRFSPDSEQS+VKEWKWEGTIAKGGTPVCRA
Sbjct: 421 SYGEKSEHWREPYDNFQDPDFLPPNDVARKRFSPDSEQSTVKEWKWEGTIAKGGTPVCRA 480

Query: 481 RCFPVGKILDMLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMHY 540
           RCFPVGK+LD+LLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIV YNEFMHY
Sbjct: 481 RCFPVGKVLDILLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVLYNEFMHY 540

Query: 541 LGEKQRAAVAKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGSIARPPPYQN 600
           LGEKQRAAV+KLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPG+I RPPPYQN
Sbjct: 541 LGEKQRAAVSKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGAITRPPPYQN 600

Query: 601 ETKDTNLLPLHSETVYTKLPTPPAGFAPVSSLSDLSKSGINNTSLHRNVATSASPVLFRG 660
           ETKD NLLPLHSET+YTKLP PPA F PVS LSDLSKSGIN+T L RNVATSASPVLF G
Sbjct: 601 ETKDANLLPLHSETLYTKLPVPPARFGPVSPLSDLSKSGINSTPLPRNVATSASPVLFHG 660

Query: 661 SAQSVGSLSDQYIENRHEYPNQQQQNAMGPNSTSHHLQNSMLDIRNIQPQASNNSMDPVI 720
           SAQS GSLSDQY++NRHEY + QQQNAMGPNS+S +LQNSMLDIRNIQPQ SNNSMD VI
Sbjct: 661 SAQSAGSLSDQYVDNRHEY-SIQQQNAMGPNSSSLNLQNSMLDIRNIQPQPSNNSMDSVI 720

Query: 721 QERHFVIPREIQETGSSNYTVGNSTVTSGNALSTQQEIKPAASLATTLSSLPPDQLAQLA 780
           QERHFV  REI+ETGSSNYT           LSTQQE+KPAASLATTLSSLPPDQLAQLA
Sbjct: 721 QERHFVDLREIRETGSSNYT-----------LSTQQEMKPAASLATTLSSLPPDQLAQLA 780

Query: 781 SSLLGHQRQPGSMSNVTMAEELRQRNLVNESVVPLARSQNGSFQNSLMNSEPQTSQMVQV 840
           SSLLG QRQ  +MSN TM EELRQRN VNESVVPLAR QN  FQ +LMNSEPQTSQ+VQ 
Sbjct: 781 SSLLGQQRQTANMSNATMTEELRQRNSVNESVVPLARYQNVPFQINLMNSEPQTSQIVQA 840

Query: 841 PQIQHVQQHQMSNVTAGQLMAQRDLQTGALGNNHQQVQNSDARGEGEADPQKRLQATLQL 900
           P IQHVQQHQM N T GQLMAQR++QT ALGNNHQ+VQNSD RGE EADPQKRLQATLQL
Sbjct: 841 PHIQHVQQHQMLNATGGQLMAQREVQTEALGNNHQEVQNSDVRGEAEADPQKRLQATLQL 896

Query: 901 AAALLQQIQQGKGN 915
           AAALLQQIQQGKGN
Sbjct: 901 AAALLQQIQQGKGN 896

[Close]

BLAST of Lsi10G000270 vs. NCBI nr
Match: KAA0036655.1 (flowering time control protein FPA [Cucumis melo var. makuwa])

HSP 1 Score: 1596.3 bits (4132), Expect = 0.0e+00
Identity = 812/914 (88.84%), Postives = 843/914 (92.23%), Query Frame = 0


Query: 1   MSGRVDGGRDRYRKDYTSRYDEKLQSGHSNNSNPPSRHLWVGNLSHVVVERDLSRYFSQF 60
           MSGRVDGGRDRYRKDY SR+DEK QSGHSN+SNPPSRHLWVGNL+HVVVERDLSRYFSQF
Sbjct: 1   MSGRVDGGRDRYRKDYMSRFDEKPQSGHSNSSNPPSRHLWVGNLAHVVVERDLSRYFSQF 60

Query: 61  GELDSIAFQPSRSYAFINFKRDEDAMAAIRELQGFALGGNPIRIEFAKADKPSALSRDED 120
           GELDSIAFQPSRSYAFINFKRDEDAMAA+RELQGF+LGGNPI+IEF KADKPSA SRDED
Sbjct: 61  GELDSIAFQPSRSYAFINFKRDEDAMAAMRELQGFSLGGNPIKIEFTKADKPSASSRDED 120

Query: 121 YSQHREEKYYGARGSFAQGRHASPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL 180
           YSQHREEKYYGARGSF+QGRH SPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL
Sbjct: 121 YSQHREEKYYGARGSFSQGRHVSPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL 180

Query: 181 RKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGS 240
           RKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGS
Sbjct: 181 RKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGS 240

Query: 241 SNGGRSSMNAPLSPRSPHLFSNFDSGDFDSRGLNRKSNLWTSGNNTFEMKRSGEFSSKLG 300
           SNGGRSS+NAPLSPRSPHLFSN DSGDFDSRG NRKSNLWTSGNN FE+KRSGEFSSKLG
Sbjct: 241 SNGGRSSINAPLSPRSPHLFSNMDSGDFDSRGFNRKSNLWTSGNNGFEIKRSGEFSSKLG 300

Query: 301 PSQDRYEHGSPTKERGPPLNNFPQSNFPQRFPQPSPFYEDPWDLPEDTNLYHGSKKLKTG 360
           PS DRYEHGSPTKERG      P +NFPQR PQPSPFY+DPWDLPED NLYHGSKKLKTG
Sbjct: 301 PSLDRYEHGSPTKERG------PLNNFPQRLPQPSPFYDDPWDLPEDMNLYHGSKKLKTG 360

Query: 361 PFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGPPLGYKQTPDRPITMPV 420
            FPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSG PLGYKQTPDRPITMPV
Sbjct: 361 AFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGLPLGYKQTPDRPITMPV 420

Query: 421 PYGEKSEQWREPYDNFQDPDFLPPNAAARKRFSPDSEQSSVKEWKWEGTIAKGGTPVCRA 480
            YGEKSE WREPYDNFQDPDFLPPN  ARKRFSPDSEQS+VKEWKWEGTIAKGGTPVCRA
Sbjct: 421 SYGEKSEHWREPYDNFQDPDFLPPNDVARKRFSPDSEQSTVKEWKWEGTIAKGGTPVCRA 480

Query: 481 RCFPVGKILDMLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMHY 540
           RCFPVGK+LD+LLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIV YNEFMHY
Sbjct: 481 RCFPVGKVLDILLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVLYNEFMHY 540

Query: 541 LGEKQRAAVAKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGSIARPPPYQN 600
           LGEKQRAAV+KLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPG+I RPPPYQN
Sbjct: 541 LGEKQRAAVSKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGAITRPPPYQN 600

Query: 601 ETKDTNLLPLHSETVYTKLPTPPAGFAPVSSLSDLSKSGINNTSLHRNVATSASPVLFRG 660
           ETKD NLLPLHSET+YTKLP PPA F PVS LSDLSKSGIN+T L RNVATSASPVLF G
Sbjct: 601 ETKDANLLPLHSETLYTKLPVPPARFGPVSPLSDLSKSGINSTPLPRNVATSASPVLFHG 660

Query: 661 SAQSVGSLSDQYIENRHEYPNQQQQNAMGPNSTSHHLQNSMLDIRNIQPQASNNSMDPVI 720
           SAQS GSLSDQY++ RHEY + QQQNAMGPNS+S +LQNSMLDIRNIQPQ SNNSMD VI
Sbjct: 661 SAQSAGSLSDQYVDIRHEY-SIQQQNAMGPNSSSLNLQNSMLDIRNIQPQPSNNSMDSVI 720

Query: 721 QERHFVIPREIQETGSSNYTVGNSTVTSGNALSTQQEIKPAASLATTLSSLPPDQLAQLA 780
           QERHFV  REI+ETGSSNYT           LSTQQE+KPAASLATTLSSLPPDQLAQLA
Sbjct: 721 QERHFVDLREIRETGSSNYT-----------LSTQQEMKPAASLATTLSSLPPDQLAQLA 780

Query: 781 SSLLGHQRQPGSMSNVTMAEELRQRNLVNESVVPLARSQNGSFQNSLMNSEPQTSQMVQV 840
           SSLLG QRQP +MSN TM EELRQRN VNESVVPLAR QN  FQ +LMNSEPQTSQ+VQ 
Sbjct: 781 SSLLGQQRQPANMSNATMTEELRQRNSVNESVVPLARYQNVPFQINLMNSEPQTSQIVQA 840

Query: 841 PQIQHVQQHQMSNVTAGQLMAQRDLQTGALGNNHQQVQNSDARGEGEADPQKRLQATLQL 900
           P IQHVQQHQM N T GQLMAQR++QT ALGNNHQ+VQNSD RGE EADPQKRLQATLQL
Sbjct: 841 PHIQHVQQHQMLNATGGQLMAQREVQTEALGNNHQEVQNSDVRGEAEADPQKRLQATLQL 896

Query: 901 AAALLQQIQQGKGN 915
           AAALLQQIQQGKGN
Sbjct: 901 AAALLQQIQQGKGN 896

[Close]

BLAST of Lsi10G000270 vs. NCBI nr
Match: XP_022140405.1 (flowering time control protein FPA [Momordica charantia])

HSP 1 Score: 1557.7 bits (4032), Expect = 0.0e+00
Identity = 798/915 (87.21%), Postives = 845/915 (92.35%), Query Frame = 0


Query: 1   MSGRVDGGRDRYRKDYTSRYDEKLQSGHSNNSNPPSRHLWVGNLSHVVVERDLSRYFSQF 60
           MSGR DGGRDR+RKDYTSRYDE+ QS HS++SNPPSRHLW+GNLSHV+VERDL+R+FSQF
Sbjct: 1   MSGRADGGRDRFRKDYTSRYDERSQSTHSSSSNPPSRHLWIGNLSHVIVERDLTRHFSQF 60

Query: 61  GELDSIAFQPSRSYAFINFKRDEDAMAAIRELQGFALGGNPIRIEFAKADKPSALSRDED 120
           GELDSIAFQPSRSYAFINFKRDE+AMAA+R LQGFALGGNPIRIEFAKADKPSA SRDED
Sbjct: 61  GELDSIAFQPSRSYAFINFKRDEEAMAAMRGLQGFALGGNPIRIEFAKADKPSASSRDED 120

Query: 121 YSQHREEKYYGARGSFAQGRHASPDQFYPEKSKMSDKNTEPSEVLWIGFPALLKVDEMIL 180
           YSQHREEKYYGA+GSF+QGRHASPDQFYPEKSKMSDKN+EPSEVLWIGFP+LLKVDEMIL
Sbjct: 121 YSQHREEKYYGAKGSFSQGRHASPDQFYPEKSKMSDKNSEPSEVLWIGFPSLLKVDEMIL 180

Query: 181 RKAFSPFGEIDKITTFPGRTYAFVRFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGS 240
           RKAFSPFGEI+KITTFPGRTYAFVRFRGV SAWRAKETLQGKLFGNPRVHICFAKNDSGS
Sbjct: 181 RKAFSPFGEIEKITTFPGRTYAFVRFRGVTSAWRAKETLQGKLFGNPRVHICFAKNDSGS 240

Query: 241 SNGGRSSMNAPLSPRSPHLFSNFDSGDFDSRGLNRKSNLWTSGNNTFEMKRSGEFSSKLG 300
           SN GRSSMNAPLSPRSPHLFSNFD+G+FDSRG NRKSNLWTSGNN FEMKRSGEFSSKLG
Sbjct: 241 SNSGRSSMNAPLSPRSPHLFSNFDAGEFDSRGFNRKSNLWTSGNNAFEMKRSGEFSSKLG 300

Query: 301 PSQDRYE-HGSPTKERGPPLNNFPQSNFPQRFPQPSPFYEDPWDLPEDTNLYHGSKKLKT 360
           P  DRYE HGSPTKERGP LN     NFPQRF Q S FYEDPWDLPED+NLYHGSKKLKT
Sbjct: 301 PPGDRYEHHGSPTKERGPHLN-----NFPQRFSQQSSFYEDPWDLPEDSNLYHGSKKLKT 360

Query: 361 GPFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGPPLGYKQTPDRPITMP 420
           GPFPQDKELPEYPLSDLEQDKRIIPKLYPDF PSE  D KMKSG PLGYKQTPDRPITMP
Sbjct: 361 GPFPQDKELPEYPLSDLEQDKRIIPKLYPDFSPSEV-DMKMKSG-PLGYKQTPDRPITMP 420

Query: 421 VPYGEKSEQWREPYDNFQDPDFLPPNAAARKRFSPDSEQSSVKEWKWEGTIAKGGTPVCR 480
           VPYGE SE+WREPYDNFQ  D +P NA ARKR SPDSEQSS+KEWKWEGTIAKGGTPVCR
Sbjct: 421 VPYGENSERWREPYDNFQGSDSMPSNAVARKRLSPDSEQSSMKEWKWEGTIAKGGTPVCR 480

Query: 481 ARCFPVGKILDMLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMH 540
           ARCFPVGK+LDMLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMH
Sbjct: 481 ARCFPVGKVLDMLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMH 540

Query: 541 YLGEKQRAAVAKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGSIARPPPYQ 600
           YLGEKQRAAV+KLDDRTTLFLVPPSEFSEKVLKVPGKLSISGV+LRLERPG+ ARPPPYQ
Sbjct: 541 YLGEKQRAAVSKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVILRLERPGTSARPPPYQ 600

Query: 601 NETKDTNLLPLHSETVYTKLPTPPAGFAPVSSLSDLSKSGINNTSLHRNVATSASPVLFR 660
           NETKDTNLLPL  ET+Y KL T PA FAP+ +LSDLSKSGINN SL RNVAT+ASPVLF 
Sbjct: 601 NETKDTNLLPLQGETLYAKLATSPAVFAPIPTLSDLSKSGINNASLPRNVATTASPVLFH 660

Query: 661 GSAQSVGSLSDQYIENRHEYPNQQQQNAMGPNSTSHHLQNSMLDIRNIQPQASNNSMDPV 720
           GSAQS+GSLSD Y+E+R EYP QQQQNAMGPN +SHHL NSM+DIRNIQ QAS+NSMDPV
Sbjct: 661 GSAQSIGSLSDPYLESRSEYPIQQQQNAMGPNLSSHHL-NSMVDIRNIQSQASHNSMDPV 720

Query: 721 IQERHFVIPREIQETGSSNYTVGNSTVTSGNALSTQQEIKPAASLATTLSSLPPDQLAQL 780
           IQERH VIPREIQETGSSN+TVG S+V SGNALSTQQEIKPAASLATTLSSL P+QLA+L
Sbjct: 721 IQERHLVIPREIQETGSSNFTVGISSVPSGNALSTQQEIKPAASLATTLSSLQPEQLAEL 780

Query: 781 ASSLLGHQRQPGSMSNVTMAEELRQRNLVNESVVPLARSQNGSFQNSLMNSEPQTSQMVQ 840
           ASSLLGHQRQ GS SN TMAEELRQRNLV+E V+PLARSQNGSFQN++MNSEPQTSQ VQ
Sbjct: 781 ASSLLGHQRQFGSTSNATMAEELRQRNLVSEPVMPLARSQNGSFQNNVMNSEPQTSQNVQ 840

Query: 841 VPQIQHVQQHQMSNVTAGQLMAQRDLQTGALGNNHQQVQNSDARGEGEADPQKRLQATLQ 900
           VPQ+Q VQ  QMSNV  G +MAQR+ QTGALGNN Q VQNSD RGE EADPQKRLQATLQ
Sbjct: 841 VPQMQLVQHLQMSNVPDGHIMAQREPQTGALGNN-QHVQNSDVRGEAEADPQKRLQATLQ 900

Query: 901 LAAALLQQIQQGKGN 915
           LAAALLQQIQQGKG+
Sbjct: 901 LAAALLQQIQQGKGS 906

[Close]

BLAST of Lsi10G000270 vs. TAIR 10
Match: AT4G12640.1 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 621.7 bits (1602), Expect = 9.4e-178
Identity = 400/917 (43.62%), Postives = 514/917 (56.05%), Query Frame = 0


Query: 33  NPPSRHLWVGNLSHVVVERDLSRYFSQFGELDSIAFQPSRSYAFINFKRDEDAMAAIREL 92
           NPPSRHLWVGNL H ++ER+L+  F +FGEL+S+AFQP RSYAF+NF  DEDA AAI  L
Sbjct: 19  NPPSRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAFAAIESL 78

Query: 93  QGFALGGNPIRIEFAKADKPSALSRDEDYSQHREEKYYGARGSFAQG----RHASPDQFY 152
           QGF L GNP+RIEFAKA+K S  SR +D  +H E++      SF Q     R+ SPD + 
Sbjct: 79  QGFPLSGNPLRIEFAKAEKSSTGSRTDDIYRHDEQRSAARGSSFVQRDSRMRYESPDTY- 138

Query: 153 PEKSKMSDKNTEPSEVLWIGFPALLKVDEMILRKAFSPFGEIDKITTFPGRTYAFVRFRG 212
             KSKM+D+N EPSEVL+IGFPA LKVD+ +LR  FS FGEI K+T FPGR+YAFV+FR 
Sbjct: 139 -SKSKMNDRNAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRN 198

Query: 213 VASAWRAKETLQGKLFGNPRVHICFAKNDSGSSNGGRSSMNAPLSP-------------- 272
           + +A +AKE+LQGKLFGNPRVHICFAK++  SS  GR      LSP              
Sbjct: 199 LMAACKAKESLQGKLFGNPRVHICFAKSEPSSSGSGRGPSGRSLSPPYRSVDRLGSSEGY 258

Query: 273 ---------------RSPHLFSNFDSGDFDSRGLNRKSNLWTSGNNTFEMKRSGEFSSKL 332
                          R PH   + D  D +    NRK +  + G   +   RS       
Sbjct: 259 LQDRNYGSISRIPSVREPHYIEDRDLEDSEGYIFNRKRDSSSDGGPAYGRSRSTHRF--- 318

Query: 333 GPSQDRYE-HGSPTKERGPPLNNFPQSNFPQRFPQPSPFYEDPWDLPEDTNLYHGSKKLK 392
              QD +E HGSP    G    +F  +  P RF   S  YE+PWDLPED   Y   K+LK
Sbjct: 319 --PQDMHEYHGSP----GEMGTSFRDN--PHRFQTRSSEYEEPWDLPEDDYYYQEIKRLK 378

Query: 393 TGPFPQDKELPEYPLSDLEQDKRIIPKLYPDFPPSETFDKKMKSGPPLGYKQTPDRPITM 452
           T     +++LP + LS +EQ++R   +   DF P + F++  ++G  L Y QT ++P+ +
Sbjct: 379 TRSSQPERQLPGHQLSGIEQERRPFSRASADFSPKDAFERNYEAG-QLRYNQTVEQPLNL 438

Query: 453 PVPYGEKSEQWREPYDNFQDPDFLPPNAAARKRFSPDSEQSSVKEWKWEGTIAKGGTPVC 512
            +  G+KS   REP++       LP     RKR++P+  + S+K+W WEGTIAKGG P+C
Sbjct: 439 AIRNGDKS-SLREPHEELMGGYPLPSVVPERKRYTPELNRPSLKDWNWEGTIAKGGNPIC 498

Query: 513 RARCFPVGKILDMLLPEFLDCTARTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFM 572
           RA+CFPVGK++DM+LPEFLDCTARTGLDML+KHYY+++ AWVVFFVP SD+DIVFY+EFM
Sbjct: 499 RAKCFPVGKVMDMMLPEFLDCTARTGLDMLAKHYYQSSKAWVVFFVPGSDADIVFYDEFM 558

Query: 573 HYLGEKQRAAVAKLDDRTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLERPGS-IARPPP 632
           HYL EKQRAAV+KLDD TTLFLVPPS+FSEKVLKVPGKLSISGV+LRLE  GS    P  
Sbjct: 559 HYLEEKQRAAVSKLDDTTTLFLVPPSDFSEKVLKVPGKLSISGVILRLECGGSGSGGPVQ 618

Query: 633 YQNETKDTNLLPLHSETVYTKLPTPPAGFAPVSSLSDLSKSGINNTSLHRNVATSASPVL 692
            Q E KDT+LL  + ET Y++     +G  P           + N  +         P  
Sbjct: 619 QQGERKDTDLLTYYGETSYSE----ASGAFP----------DVGNPRI-------PGPTA 678

Query: 693 FRGSA--QSVGSLSDQYIENRHEYPNQQQQNAMGPNSTSHHLQNSMLDIRNIQPQASNNS 752
           F  SA   +  +  D Y+E++H+               SH    S    R+  P+ S+  
Sbjct: 679 FLRSAGRDNQSASMDPYVEDKHD-------------QLSHRYSGSDWPPRDTNPR-SSPF 738

Query: 753 MDPVIQERHFVIPREIQETGSSNYTVGNSTVTSGNALSTQQEIKPAASLATTLSSLPPDQ 812
           +D  +Q+    +P + Q    S Y    + V +G                       P+Q
Sbjct: 739 IDHTVQKHSGFVPGKQQNADLSRYHDTETPVPAG---------------------FQPEQ 798

Query: 813 LAQLASSLLGHQRQPGSMSNVTMAEELRQRNLVNESVVPLARSQNGSFQNSLMNSEPQTS 872
           L  LASSL   Q+Q  +  N              E   P  R+     Q++   S PQ  
Sbjct: 799 LTHLASSLPRQQQQVQNTPNQP------------ERYAPEGRASFSHLQHAQTPSIPQ-- 821

Query: 873 QMVQVPQIQHVQQHQMSNVTAGQLMAQRDLQTGALGNNHQQVQNSDARGEGEADPQKRLQ 913
             +  PQ Q+VQ                            Q  NS  + E EA+PQKRLQ
Sbjct: 859 --LVTPQNQNVQ---------------------------IQSSNSQQQEETEANPQKRLQ 821

[Close]

BLAST of Lsi10G000270 vs. TAIR 10
Match: AT2G43410.2 (RNA binding )

HSP 1 Score: 217.6 bits (553), Expect = 4.1e-56
Identity = 267/978 (27.30%), Postives = 385/978 (39.37%), Query Frame = 0


Query: 29  SNNSNPPSRHLWVGNLSHVVVERDLSRYFSQFGELDSIAFQPSRSYAFINFKRDEDAMAA 88
           +++S   S +LWVG+L+    E DL+  F ++G++D I    SR +AFI ++  E+A+AA
Sbjct: 10  ADDSGFQSNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAA 69

Query: 89  IRELQGFALGGNPIRIEFAKADKP----------------------SALSRDEDYSQHRE 148
              LQG  L G+ I+IE+A+  KP                      S   + ED+   RE
Sbjct: 70  KEALQGANLNGSQIKIEYARPAKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRE 129

Query: 149 EK-----YYG-------------------ARGSFAQGRHASPDQF--------------- 208
            K     YY                     R  F + +    +Q+               
Sbjct: 130 RKTAFIDYYEMDDALQAKSMNGKPMGGSFLRVDFLRSQAPKKEQWAGSYDNRNGNMNHKP 189

Query: 209 -YPEKSKMSDKNTEPSEVLWIGFP--ALLKVDEMILRKAFSPFGEIDKITTFPGRTYAFV 268
            YP   +    + +PS+VLWIGFP  A    DE IL  A   FGEI+++ ++P R +A V
Sbjct: 190 QYPHSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALV 249

Query: 269 RFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGSSNGGRSSMNAPLSPRSPHLFSNFD 328
            FR    A + KE LQG+LF NPR+ I ++              N  L P      ++F 
Sbjct: 250 EFRSAEEARQCKEGLQGRLFNNPRIKIMYS--------------NDELPPEQDD--TSFY 309

Query: 329 SGDFDSRGLNRKSNLWTSGNNTFEMKRSGEFSSKLGPSQDRYEHGSPTKERGPPLNNFPQ 388
           SG                      MKRS        PS     H +       PL    +
Sbjct: 310 SG----------------------MKRSRTDMFNNDPSFVSSPHSTGIPGSMRPLRGTNE 369

Query: 389 SNFPQRFPQPSPFYEDPWDLPEDTNLYHGSKKLKTG--PFPQDKELPEYPLSDLEQDKRI 448
            ++           E  W  P             TG  P P    +   P     +  R 
Sbjct: 370 RSYNGAEYNDVVGKEPNWRRPSANG---------TGILPSPTGPGILPSPAQGTRRPMRS 429

Query: 449 IPKLYPDFPPSETFDKKMKSGPPLGYKQTPDRPITMPVPYGEKSEQWREPYDNFQDPDFL 508
            P  +  + P++   +  ++          D  +    P G              +  F 
Sbjct: 430 NPDSWEGYDPAQLVRESKRT--------RRDGSVDGFTPMG------------VDERSFG 489

Query: 509 PPNAAARK-RFSPDSEQSSVKEWKWEGTIAKGGTPVCRARCFPVGKILDMLLPEFLDCTA 568
             + AAR  R  PDS+        W G IAKGGTPVC ARC P+GK ++  LPE ++C+A
Sbjct: 490 RGSVAARPIRGPPDSDHI------WRGMIAKGGTPVCCARCVPMGKGIETKLPEVVNCSA 549

Query: 569 RTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMHYLGEKQRAAVAKLDDRTTLFLV 628
           RT L+ML+KHY  A    +VFFVP+ + D   Y EF+ YL  K RA VAKLDD TTLFLV
Sbjct: 550 RTDLNMLAKHYAVAIGCEIVFFVPDREEDFASYTEFLRYLSSKDRAGVAKLDDGTTLFLV 609

Query: 629 PPSEFSEKVLKVPGKLSISGVVLRLERPGSIARPPPYQNETKDTNLLPLHSETVYTKLPT 688
           PPS+F   VL+V  +  + GVVL+L  P ++     Y+ E++     PLH          
Sbjct: 610 PPSDFLTDVLQVTRQERLYGVVLKLP-PPAVPVTASYRQESQSN---PLHY--------M 669

Query: 689 PPAGFAPVSSLSDLSKSGINNTSLHRNVATSASPVLFRGSAQSVGSLSDQYIENRHEYPN 748
             A  +P ++   L     N                 RG+ + + + S   +      PN
Sbjct: 670 DQARDSPANASHSLYPPREN---------------YIRGAPEHLTAASKPSVSEPLRIPN 729

Query: 749 QQQQNAMGPNSTSHHLQNSMLDIRNIQPQASNNSMDP------VIQERHFVIPREIQETG 808
                A G + T   L      +      A+  S  P      V+   H        E  
Sbjct: 730 NAAPQA-GVSLTPELLATLASILPATSQPAAPESHQPMSGPSTVVSTAHQSNGLYNGEAP 789

Query: 809 SSNYTVGNSTVTSGNALSTQQ---EIKPAASLATTLSSLPPDQLAQLASSLLGHQRQPGS 868
           S  +  G  TV   +  S QQ   +  PA  L    S  PP       +S + H      
Sbjct: 790 SQAWKRGPQTVHDASNQSFQQYGNQYTPAGQLPPPPSRYPPASNNPNYTSGMVHGNMQYQ 849

Query: 869 MSNVTMAEELRQRNLV--NESVVPLARSQNGSFQNSLMNSEPQTSQMVQ----VPQIQHV 911
             +V M +     N+   N S+     S +   Q  +   +P+ S   Q    +P  Q  
Sbjct: 850 SQSVNMPQLSPLPNMPHNNYSMYTQGSSNHPVSQPMVQQYQPEASMPNQNYGPIPSYQQA 886

[Close]

BLAST of Lsi10G000270 vs. TAIR 10
Match: AT2G43410.3 (RNA binding )

HSP 1 Score: 217.6 bits (553), Expect = 4.1e-56
Identity = 267/978 (27.30%), Postives = 385/978 (39.37%), Query Frame = 0


Query: 29  SNNSNPPSRHLWVGNLSHVVVERDLSRYFSQFGELDSIAFQPSRSYAFINFKRDEDAMAA 88
           +++S   S +LWVG+L+    E DL+  F ++G++D I    SR +AFI ++  E+A+AA
Sbjct: 10  ADDSGFQSNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAA 69

Query: 89  IRELQGFALGGNPIRIEFAKADKP----------------------SALSRDEDYSQHRE 148
              LQG  L G+ I+IE+A+  KP                      S   + ED+   RE
Sbjct: 70  KEALQGANLNGSQIKIEYARPAKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRE 129

Query: 149 EK-----YYG-------------------ARGSFAQGRHASPDQF--------------- 208
            K     YY                     R  F + +    +Q+               
Sbjct: 130 RKTAFIDYYEMDDALQAKSMNGKPMGGSFLRVDFLRSQAPKKEQWAGSYDNRNGNMNHKP 189

Query: 209 -YPEKSKMSDKNTEPSEVLWIGFP--ALLKVDEMILRKAFSPFGEIDKITTFPGRTYAFV 268
            YP   +    + +PS+VLWIGFP  A    DE IL  A   FGEI+++ ++P R +A V
Sbjct: 190 QYPHSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALV 249

Query: 269 RFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGSSNGGRSSMNAPLSPRSPHLFSNFD 328
            FR    A + KE LQG+LF NPR+ I ++              N  L P      ++F 
Sbjct: 250 EFRSAEEARQCKEGLQGRLFNNPRIKIMYS--------------NDELPPEQDD--TSFY 309

Query: 329 SGDFDSRGLNRKSNLWTSGNNTFEMKRSGEFSSKLGPSQDRYEHGSPTKERGPPLNNFPQ 388
           SG                      MKRS        PS     H +       PL    +
Sbjct: 310 SG----------------------MKRSRTDMFNNDPSFVSSPHSTGIPGSMRPLRGTNE 369

Query: 389 SNFPQRFPQPSPFYEDPWDLPEDTNLYHGSKKLKTG--PFPQDKELPEYPLSDLEQDKRI 448
            ++           E  W  P             TG  P P    +   P     +  R 
Sbjct: 370 RSYNGAEYNDVVGKEPNWRRPSANG---------TGILPSPTGPGILPSPAQGTRRPMRS 429

Query: 449 IPKLYPDFPPSETFDKKMKSGPPLGYKQTPDRPITMPVPYGEKSEQWREPYDNFQDPDFL 508
            P  +  + P++   +  ++          D  +    P G              +  F 
Sbjct: 430 NPDSWEGYDPAQLVRESKRT--------RRDGSVDGFTPMG------------VDERSFG 489

Query: 509 PPNAAARK-RFSPDSEQSSVKEWKWEGTIAKGGTPVCRARCFPVGKILDMLLPEFLDCTA 568
             + AAR  R  PDS+        W G IAKGGTPVC ARC P+GK ++  LPE ++C+A
Sbjct: 490 RGSVAARPIRGPPDSDHI------WRGMIAKGGTPVCCARCVPMGKGIETKLPEVVNCSA 549

Query: 569 RTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMHYLGEKQRAAVAKLDDRTTLFLV 628
           RT L+ML+KHY  A    +VFFVP+ + D   Y EF+ YL  K RA VAKLDD TTLFLV
Sbjct: 550 RTDLNMLAKHYAVAIGCEIVFFVPDREEDFASYTEFLRYLSSKDRAGVAKLDDGTTLFLV 609

Query: 629 PPSEFSEKVLKVPGKLSISGVVLRLERPGSIARPPPYQNETKDTNLLPLHSETVYTKLPT 688
           PPS+F   VL+V  +  + GVVL+L  P ++     Y+ E++     PLH          
Sbjct: 610 PPSDFLTDVLQVTRQERLYGVVLKLP-PPAVPVTASYRQESQSN---PLHY--------M 669

Query: 689 PPAGFAPVSSLSDLSKSGINNTSLHRNVATSASPVLFRGSAQSVGSLSDQYIENRHEYPN 748
             A  +P ++   L     N                 RG+ + + + S   +      PN
Sbjct: 670 DQARDSPANASHSLYPPREN---------------YIRGAPEHLTAASKPSVSEPLRIPN 729

Query: 749 QQQQNAMGPNSTSHHLQNSMLDIRNIQPQASNNSMDP------VIQERHFVIPREIQETG 808
                A G + T   L      +      A+  S  P      V+   H        E  
Sbjct: 730 NAAPQA-GVSLTPELLATLASILPATSQPAAPESHQPMSGPSTVVSTAHQSNGLYNGEAP 789

Query: 809 SSNYTVGNSTVTSGNALSTQQ---EIKPAASLATTLSSLPPDQLAQLASSLLGHQRQPGS 868
           S  +  G  TV   +  S QQ   +  PA  L    S  PP       +S + H      
Sbjct: 790 SQAWKRGPQTVHDASNQSFQQYGNQYTPAGQLPPPPSRYPPASNNPNYTSGMVHGNMQYQ 849

Query: 869 MSNVTMAEELRQRNLV--NESVVPLARSQNGSFQNSLMNSEPQTSQMVQ----VPQIQHV 911
             +V M +     N+   N S+     S +   Q  +   +P+ S   Q    +P  Q  
Sbjct: 850 SQSVNMPQLSPLPNMPHNNYSMYTQGSSNHPVSQPMVQQYQPEASMPNQNYGPIPSYQQA 886

[Close]

BLAST of Lsi10G000270 vs. TAIR 10
Match: AT2G43410.4 (RNA binding )

HSP 1 Score: 217.6 bits (553), Expect = 4.1e-56
Identity = 267/978 (27.30%), Postives = 385/978 (39.37%), Query Frame = 0


Query: 29  SNNSNPPSRHLWVGNLSHVVVERDLSRYFSQFGELDSIAFQPSRSYAFINFKRDEDAMAA 88
           +++S   S +LWVG+L+    E DL+  F ++G++D I    SR +AFI ++  E+A+AA
Sbjct: 10  ADDSGFQSNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAA 69

Query: 89  IRELQGFALGGNPIRIEFAKADKP----------------------SALSRDEDYSQHRE 148
              LQG  L G+ I+IE+A+  KP                      S   + ED+   RE
Sbjct: 70  KEALQGANLNGSQIKIEYARPAKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRE 129

Query: 149 EK-----YYG-------------------ARGSFAQGRHASPDQF--------------- 208
            K     YY                     R  F + +    +Q+               
Sbjct: 130 RKTAFIDYYEMDDALQAKSMNGKPMGGSFLRVDFLRSQAPKKEQWAGSYDNRNGNMNHKP 189

Query: 209 -YPEKSKMSDKNTEPSEVLWIGFP--ALLKVDEMILRKAFSPFGEIDKITTFPGRTYAFV 268
            YP   +    + +PS+VLWIGFP  A    DE IL  A   FGEI+++ ++P R +A V
Sbjct: 190 QYPHSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALV 249

Query: 269 RFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGSSNGGRSSMNAPLSPRSPHLFSNFD 328
            FR    A + KE LQG+LF NPR+ I ++              N  L P      ++F 
Sbjct: 250 EFRSAEEARQCKEGLQGRLFNNPRIKIMYS--------------NDELPPEQDD--TSFY 309

Query: 329 SGDFDSRGLNRKSNLWTSGNNTFEMKRSGEFSSKLGPSQDRYEHGSPTKERGPPLNNFPQ 388
           SG                      MKRS        PS     H +       PL    +
Sbjct: 310 SG----------------------MKRSRTDMFNNDPSFVSSPHSTGIPGSMRPLRGTNE 369

Query: 389 SNFPQRFPQPSPFYEDPWDLPEDTNLYHGSKKLKTG--PFPQDKELPEYPLSDLEQDKRI 448
            ++           E  W  P             TG  P P    +   P     +  R 
Sbjct: 370 RSYNGAEYNDVVGKEPNWRRPSANG---------TGILPSPTGPGILPSPAQGTRRPMRS 429

Query: 449 IPKLYPDFPPSETFDKKMKSGPPLGYKQTPDRPITMPVPYGEKSEQWREPYDNFQDPDFL 508
            P  +  + P++   +  ++          D  +    P G              +  F 
Sbjct: 430 NPDSWEGYDPAQLVRESKRT--------RRDGSVDGFTPMG------------VDERSFG 489

Query: 509 PPNAAARK-RFSPDSEQSSVKEWKWEGTIAKGGTPVCRARCFPVGKILDMLLPEFLDCTA 568
             + AAR  R  PDS+        W G IAKGGTPVC ARC P+GK ++  LPE ++C+A
Sbjct: 490 RGSVAARPIRGPPDSDHI------WRGMIAKGGTPVCCARCVPMGKGIETKLPEVVNCSA 549

Query: 569 RTGLDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMHYLGEKQRAAVAKLDDRTTLFLV 628
           RT L+ML+KHY  A    +VFFVP+ + D   Y EF+ YL  K RA VAKLDD TTLFLV
Sbjct: 550 RTDLNMLAKHYAVAIGCEIVFFVPDREEDFASYTEFLRYLSSKDRAGVAKLDDGTTLFLV 609

Query: 629 PPSEFSEKVLKVPGKLSISGVVLRLERPGSIARPPPYQNETKDTNLLPLHSETVYTKLPT 688
           PPS+F   VL+V  +  + GVVL+L  P ++     Y+ E++     PLH          
Sbjct: 610 PPSDFLTDVLQVTRQERLYGVVLKLP-PPAVPVTASYRQESQSN---PLHY--------M 669

Query: 689 PPAGFAPVSSLSDLSKSGINNTSLHRNVATSASPVLFRGSAQSVGSLSDQYIENRHEYPN 748
             A  +P ++   L     N                 RG+ + + + S   +      PN
Sbjct: 670 DQARDSPANASHSLYPPREN---------------YIRGAPEHLTAASKPSVSEPLRIPN 729

Query: 749 QQQQNAMGPNSTSHHLQNSMLDIRNIQPQASNNSMDP------VIQERHFVIPREIQETG 808
                A G + T   L      +      A+  S  P      V+   H        E  
Sbjct: 730 NAAPQA-GVSLTPELLATLASILPATSQPAAPESHQPMSGPSTVVSTAHQSNGLYNGEAP 789

Query: 809 SSNYTVGNSTVTSGNALSTQQ---EIKPAASLATTLSSLPPDQLAQLASSLLGHQRQPGS 868
           S  +  G  TV   +  S QQ   +  PA  L    S  PP       +S + H      
Sbjct: 790 SQAWKRGPQTVHDASNQSFQQYGNQYTPAGQLPPPPSRYPPASNNPNYTSGMVHGNMQYQ 849

Query: 869 MSNVTMAEELRQRNLV--NESVVPLARSQNGSFQNSLMNSEPQTSQMVQ----VPQIQHV 911
             +V M +     N+   N S+     S +   Q  +   +P+ S   Q    +P  Q  
Sbjct: 850 SQSVNMPQLSPLPNMPHNNYSMYTQGSSNHPVSQPMVQQYQPEASMPNQNYGPIPSYQQA 886

[Close]

BLAST of Lsi10G000270 vs. TAIR 10
Match: AT2G43410.1 (RNA binding )

HSP 1 Score: 211.5 bits (537), Expect = 2.9e-54
Identity = 262/975 (26.87%), Postives = 376/975 (38.56%), Query Frame = 0


Query: 29  SNNSNPPSRHLWVGNLSHVVVERDLSRYFSQFGELDSIAFQPSRSYAFINFKRDEDAMAA 88
           +++S   S +LWVG+L+    E DL+  F ++G++D I    SR +AFI ++  E+A+AA
Sbjct: 10  ADDSGFQSNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAA 69

Query: 89  IRELQGFALGGNPIRIEFAKADKP----------------------SALSRDEDYSQHRE 148
              LQG  L G+ I+IE+A+  KP                      S   + ED+   RE
Sbjct: 70  KEALQGANLNGSQIKIEYARPAKPCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRE 129

Query: 149 EK-----YYG-------------------ARGSFAQGRHASPDQF--------------- 208
            K     YY                     R  F + +    +Q+               
Sbjct: 130 RKTAFIDYYEMDDALQAKSMNGKPMGGSFLRVDFLRSQAPKKEQWAGSYDNRNGNMNHKP 189

Query: 209 -YPEKSKMSDKNTEPSEVLWIGFP--ALLKVDEMILRKAFSPFGEIDKITTFPGRTYAFV 268
            YP   +    + +PS+VLWIGFP  A    DE IL  A   FGEI+++ ++P R +A V
Sbjct: 190 QYPHSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALV 249

Query: 269 RFRGVASAWRAKETLQGKLFGNPRVHICFAKNDSGSSNGGRSSMNAPLSPRSPHLFSNFD 328
            FR    A + KE LQG+LF NPR+ I ++              N  L P         +
Sbjct: 250 EFRSAEEARQCKEGLQGRLFNNPRIKIMYS--------------NDELPPEQDDTSFYSE 309

Query: 329 SGDFDSRGLNRKSNLWTSGNNTFEMKRSGEFSSKLGPSQDRYEHGSPTKERGPPLNNFPQ 388
             D   +  N +     S N T      G   S  GP        SP +    P+ + P 
Sbjct: 310 YNDVVGKEPNWRR---PSANGT------GILPSPTGPG----ILPSPAQGTRRPMRSNP- 369

Query: 389 SNFPQRFPQPSPFYEDPWDLPEDTNLYHGSKKLKTGPFPQDKELPEYPLSDLEQDKRIIP 448
                          D W+  +   L   SK+ +                          
Sbjct: 370 ---------------DSWEGYDPAQLVRESKRTRR------------------------- 429

Query: 449 KLYPDFPPSETFDKKMKSGPPLGYKQTPDRPITMPVPYGEKSEQWREPYDNFQDPDFLPP 508
                       D  +    P+G  +           +G  S                  
Sbjct: 430 ------------DGSVDGFTPMGVDER---------SFGRGSV----------------- 489

Query: 509 NAAARKRFSPDSEQSSVKEWKWEGTIAKGGTPVCRARCFPVGKILDMLLPEFLDCTARTG 568
            AA   R  PDS+        W G IAKGGTPVC ARC P+GK ++  LPE ++C+ART 
Sbjct: 490 -AARPIRGPPDSDHI------WRGMIAKGGTPVCCARCVPMGKGIETKLPEVVNCSARTD 549

Query: 569 LDMLSKHYYEAASAWVVFFVPESDSDIVFYNEFMHYLGEKQRAAVAKLDDRTTLFLVPPS 628
           L+ML+KHY  A    +VFFVP+ + D   Y EF+ YL  K RA VAKLDD TTLFLVPPS
Sbjct: 550 LNMLAKHYAVAIGCEIVFFVPDREEDFASYTEFLRYLSSKDRAGVAKLDDGTTLFLVPPS 609

Query: 629 EFSEKVLKVPGKLSISGVVLRLERPGSIARPPPYQNETKDTNLLPLHSETVYTKLPTPPA 688
           +F   VL+V  +  + GVVL+L  P ++     Y+ E++     PLH            A
Sbjct: 610 DFLTDVLQVTRQERLYGVVLKLP-PPAVPVTASYRQESQSN---PLHY--------MDQA 669

Query: 689 GFAPVSSLSDLSKSGINNTSLHRNVATSASPVLFRGSAQSVGSLSDQYIENRHEYPNQQQ 748
             +P ++   L     N                 RG+ + + + S   +      PN   
Sbjct: 670 RDSPANASHSLYPPREN---------------YIRGAPEHLTAASKPSVSEPLRIPNNAA 729

Query: 749 QNAMGPNSTSHHLQNSMLDIRNIQPQASNNSMDP------VIQERHFVIPREIQETGSSN 808
             A G + T   L      +      A+  S  P      V+   H        E  S  
Sbjct: 730 PQA-GVSLTPELLATLASILPATSQPAAPESHQPMSGPSTVVSTAHQSNGLYNGEAPSQA 789

Query: 809 YTVGNSTVTSGNALSTQQ---EIKPAASLATTLSSLPPDQLAQLASSLLGHQRQPGSMSN 868
           +  G  TV   +  S QQ   +  PA  L    S  PP       +S + H        +
Sbjct: 790 WKRGPQTVHDASNQSFQQYGNQYTPAGQLPPPPSRYPPASNNPNYTSGMVHGNMQYQSQS 843

Query: 869 VTMAEELRQRNLV--NESVVPLARSQNGSFQNSLMNSEPQTSQMVQ----VPQIQHVQQH 911
           V M +     N+   N S+     S +   Q  +   +P+ S   Q    +P  Q    H
Sbjct: 850 VNMPQLSPLPNMPHNNYSMYTQGSSNHPVSQPMVQQYQPEASMPNQNYGPIPSYQQANFH 843

The following BLAST results are available for this feature:

BLAST of Lsi10G000270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPQ9	5.7e-55	27.30	Flowering time control protein FPA OS=Arabidopsis thaliana OX=3702 GN=FPA PE=1 S...	[more]
P08579	2.5e-10	27.48	U2 small nuclear ribonucleoprotein B'' OS=Homo sapiens OX=9606 GN=SNRPB2 PE=1 SV...	[more]
P31483	2.5e-10	27.89	Nucleolysin TIA-1 isoform p40 OS=Homo sapiens OX=9606 GN=TIA1 PE=1 SV=3	[more]
P52912	3.3e-10	28.95	Nucleolysin TIA-1 OS=Mus musculus OX=10090 GN=Tia1 PE=1 SV=1	[more]
Q01085	7.3e-10	28.42	Nucleolysin TIAR OS=Homo sapiens OX=9606 GN=TIAL1 PE=1 SV=1	[more]

BLAST of Lsi10G000270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA84	0.0e+00	89.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G115600 PE=4 SV=1	[more]
A0A5D3BPF5	0.0e+00	88.84	Flowering time control protein FPA OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BJL6	0.0e+00	88.84	flowering time control protein FPA OS=Cucumis melo OX=3656 GN=LOC103490426 PE=4 ...	[more]
A0A5A7T5C2	0.0e+00	88.84	Flowering time control protein FPA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A6J1CF06	0.0e+00	87.21	flowering time control protein FPA OS=Momordica charantia OX=3673 GN=LOC11101109...	[more]

BLAST of Lsi10G000270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901035.1	0.0e+00	94.32	flowering time control protein FPA [Benincasa hispida]	[more]
XP_004140066.1	0.0e+00	89.93	flowering time control protein FPA isoform X1 [Cucumis sativus]	[more]
XP_008448142.1	0.0e+00	88.84	PREDICTED: flowering time control protein FPA [Cucumis melo] >TYK01084.1 floweri...	[more]
KAA0036655.1	0.0e+00	88.84	flowering time control protein FPA [Cucumis melo var. makuwa]	[more]
XP_022140405.1	0.0e+00	87.21	flowering time control protein FPA [Momordica charantia]	[more]

BLAST of Lsi10G000270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12640.1	9.4e-178	43.62	RNA recognition motif (RRM)-containing protein	[more]
AT2G43410.2	4.1e-56	27.30	RNA binding	[more]
AT2G43410.3	4.1e-56	27.30	RNA binding	[more]
AT2G43410.4	4.1e-56	27.30	RNA binding	[more]
AT2G43410.1	2.9e-54	26.87	RNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 38..105 e-value: 2.9E-15 score: 66.7 coord: 164..232 e-value: 1.0E-4 score: 31.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 39..103 e-value: 1.6E-11 score: 43.8 coord: 175..228 e-value: 1.1E-6 score: 28.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 162..236 score: 10.616019
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 37..109 score: 16.653631
IPR012921	Spen paralogue and orthologue SPOC, C-terminal	PFAM	PF07744	SPOC	coord: 457..574 e-value: 1.5E-17 score: 63.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 9..146 e-value: 1.7E-22 score: 82.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 149..243 e-value: 1.7E-12 score: 49.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 387..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 873..894
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 345..363
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..368
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..332
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR23189:SF41	RNA-BINDING PROTEIN SPENITO	coord: 21..904
None	No IPR available	PANTHER	PTHR23189	RNA RECOGNITION MOTIF-CONTAINING	coord: 21..904
None	No IPR available	CDD	cd12310	RRM3_Spen	coord: 39..108 e-value: 2.87605E-18 score: 78.0165
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 23..113
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 151..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G000270.1	Lsi10G000270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding