Lsi09G018660 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G018660
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Multidrug resistance protein ABC transporter family
Location	chr09: 27488131 .. 27491308 (+)
RNA-Seq Expression	Lsi09G018660
Synteny	Lsi09G018660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAATTTAACATTTTTTTTTATGTTCGCAAGGCAGCAGCGGCACAAGGCTGCAGTCACCGCCATAAAACAAAACGGAGCCTCCTCTCTGCTTTGTTTTTCGCCGGAGCGGCTAAACTGAGCAACGGAGGTCGTCGGCCGGTTTTGGATGGCGGCGAGAACAACGCCGATTGTTCTCCCAGCTGTTCAATTGAAAGCTACAGACTCAAATGGCGTAACTCCTTCTCGGAGCTCTTTTCCTAGTCTATCAATTCCAAAGCCTTCTTGGATCGTCAGAACTGAGGTAATTCGCTTAAGTAAACTTCAATTCCCCTTTTTTTTTCTCAATATGAAAATAATTAGCCCCATTTGACTGGTCTGTTCGTTCTTTTAACTCTCTCTTTCGAATGAAAATTGTGTTGTTGTATCTTTCGTTTATCTCAAGCCCTTTTTTGTTCTCTGTTCATGATTCTCTTCATGTTTAGCTTATCTGAATGTATGAAGGACATTTCTTAACTGTAATTGGCATGTTCCCGATGTTAATACTCTTGTTCGGATCCTTCCCCAACATGGGACAATGATTTTAGCTCTTAATTGAAGTTAGGTTGTATCTTCCGCAGAAAAGCACTTAAGATTGTGATTTTGTTTAGTCTACTGATGAGGATATAACTGTACCTGCTATTTGACTGAGTGGGAAAGAGGAATCCCTGGCTAGTTTACCAAATACTGTTTCAGATTAGATGTCTATAAGGGAATTTATCATTATTGATTGTAACTTTAATTGTATTTCCATTATTTACTTATGAATTGTTTGTTATGAACACTGTTGAAACCACATACTTACGTATTACCTAGTTTATTCTGTAATGAAACTTATTTCTGTTTCCCCCAACTCATTTTATGGTACTAGTCTTAATGATATACTTGATAGGAATGTTATTTGAAATTTGGAGTCTATTAGGCCCGGTTTGATAACCACTTTCTACTAATATTTTGAAAAATCAAGCCAAGTTTTGAAAACTAAAAAAAAAAGTAGTTTTCAAAAACTTGTTTTTGTTTTTAAGACTTTATAATGTATTGTACTATGAACTATGAACTTGTTTTTATTTTTAGAATTTGACTAGGAGTTTAGGTGTTCCTTTAGAAATGGTGAAAACTATAATTGAAAAATTTGGAGGAAATGAACATAAATTTGAAAAACAGAAAATAAAAAATGAAATCATTATCAATGGGGCCTTAATAATTATAATTAGTTCAGGAAGTTAGGGTATTGGGTTATAAATAGAGGGGGTGGGAGATTTAGAAGGTAGGCATTTGGTGAGTGAATTAAAACTCGAAAGATATCTCAAGAGGGAGGGTCCAAGTACCTTGAATACTTGGGGGAGTTCTATTGTAATTTCACTATTTATTCAATTTTAATGGGTTATATCAATCCTCTTGTTAAGTAATTTTCCTATTGATATTAATGCTTTTACTACTTGGGTTCTCTTTTGTGTGCTTGGCTTTTCTACCACCATATACGATGGTAGGAAATGCTTATTTCCGAGTGTTAATGAAGAATTAAGTGAGAATATTTTGAGGCTATAAATGATAAGTCGTAGTTTTCTTCTGTATCCTATACTAGTGTTTATTAGGTGTATTGGTTTTGATACCTCTGTTATATTTTTATATCGGTTCTCAAGTTTGTTTTGCTAATGTGAACATGATTTACCCATCAAACTAAGTGATAGTTGAACAAGACATTAAGAGAGAGTTAGGGTGTGTTTGGGAGTGATTTTTGCTAATGCTACAACCATTTCCATTTTAATATGGTTATGTTTGGCAATGTCATGGATGTCATTTTCGAAATATCCTAAATCACTTTTACATTAGTTACTTGTGAAGGATTTTGGGTCAAGTGCTTAACCAATAATTATTTAAGACAGTAACCATTTTTTTAAATGGCGATCTTTAGTAATTTTATGATTCTGTAATCACTTTTAGAATGAACCATTATATATTAATCATACGACATCACCTTTGGTACATAAAATCTACATTTTATAGTGTAAAACCAATCATTAATGATTTGTCATTAAACACCTTATAATGATATATCACTTTTGCTAAAATCACTGGTTCAAAAGTCACCTCTAAATATGGCCTTTTGTTTTCATAGTCATTCTCATTGTAGTGTTTCCTCTCTCTCACTCCAGTCAAATGTTAGGAGAGAAAAAAGAAAGAAGCCAGATCCACCTTGTGTGATATGCAATGGAAGTGGTAGAGTTGATTGTCACCATTGTTGTGGAAGAGGTACCTCTCTCTTTCTCTCTCTCTCTCTCATCAACACCTCCATTAGATGGCTAATTAGGACCTGTTGCATCAGAAATTTTGGGTTCAGAGCTTATTATCTCTTTCAAGTAACTGGCAGTTATTCCACCAGAAATTTTGAATTGAATTTATTTGTCCAATCCCTTTAAGTAACATGTCCTTATGCTTTCAAACTAGGGAGGACAAATTTTGTTCACCTAGAAATGCTTCCAAAAGGGGAATGGCCAAAATGGTACGACTGTTTGTGATATTTCCTTTCTGCTACTGGTAACTTTGTTAATGTTCTCTCTTTTTCACATCGCCAAAACTTGGTATCAAATGAACTAGCCCTTAATTACAATTGCAGGTGCAGGACTTGTGGAGGGAGTGGTCTCGGCTACTGCTCCCGTTGCCTCGGGACAGGAGAGTATCGATATATTATGGGGTTCCAATTCATGAAGATGGAAAACAATGAAACTCAGGATCTTAAGAAGTATGAGGATCAAGCCCAGCAATATCCCAGAAGCGCAGATTCTCTTCTAAATGATGAGTTGAGTTCAGAGCCAGAAATATGAGAGAAGTTTACAATTGTGTGACAATAAAATACTAATTCAAACTGATGGACTTCTTTTTAGAATAAAAACATTGTAATATAATTGGGGGATATGGTAAATTTTTGCCCCTATTTTAGGATGATTTTCGAGTTAATAATCTTGTACTACAGGCTATAGTTGATCGGCAAGTATGTGTTGTGATTCAAATCTATTTTTTATGGTCATTTGGAAAATATCAATTCCAATTATTTTTCCTGGTAATTTTTTTAGTACAATAAGTGAAGAATTCGAGCCACAAATCTCTTGATTGTCAACACATACTATATCATAGTTGAGCAGCAAGACAACTTATGGCA

mRNA sequence

TTTTAATTTAACATTTTTTTTTATGTTCGCAAGGCAGCAGCGGCACAAGGCTGCAGTCACCGCCATAAAACAAAACGGAGCCTCCTCTCTGCTTTGTTTTTCGCCGGAGCGGCTAAACTGAGCAACGGAGGTCGTCGGCCGGTTTTGGATGGCGGCGAGAACAACGCCGATTGTTCTCCCAGCTGTTCAATTGAAAGCTACAGACTCAAATGGCGTAACTCCTTCTCGGAGCTCTTTTCCTAGTCTATCAATTCCAAAGCCTTCTTGGATCGTCAGAACTGAGTCAAATGTTAGGAGAGAAAAAAGAAAGAAGCCAGATCCACCTTGTGTGATATGCAATGGAAGTGGTAGAGTTGATTGTCACCATTGTTGTGGAAGAGGGAGGACAAATTTTGTTCACCTAGAAATGCTTCCAAAAGGGGAATGGCCAAAATGGTGCAGGACTTGTGGAGGGAGTGGTCTCGGCTACTGCTCCCGTTGCCTCGGGACAGGAGAGTATCGATATATTATGGGGTTCCAATTCATGAAGATGGAAAACAATGAAACTCAGGATCTTAAGAAGTATGAGGATCAAGCCCAGCAATATCCCAGAAGCGCAGATTCTCTTCTAAATGATGAGTTGAGTTCAGAGCCAGAAATATGAGAGAAGTTTACAATTGTGTGACAATAAAATACTAATTCAAACTGATGGACTTCTTTTTAGAATAAAAACATTGTAATATAATTGGGGGATATGGTAAATTTTTGCCCCTATTTTAGGATGATTTTCGAGTTAATAATCTTGTACTACAGGCTATAGTTGATCGGCAAGTATGTGTTGTGATTCAAATCTATTTTTTATGGTCATTTGGAAAATATCAATTCCAATTATTTTTCCTGGTAATTTTTTTAGTACAATAAGTGAAGAATTCGAGCCACAAATCTCTTGATTGTCAACACATACTATATCATAGTTGAGCAGCAAGACAACTTATGGCA

Coding sequence (CDS)

ATGGCGGCGAGAACAACGCCGATTGTTCTCCCAGCTGTTCAATTGAAAGCTACAGACTCAAATGGCGTAACTCCTTCTCGGAGCTCTTTTCCTAGTCTATCAATTCCAAAGCCTTCTTGGATCGTCAGAACTGAGTCAAATGTTAGGAGAGAAAAAAGAAAGAAGCCAGATCCACCTTGTGTGATATGCAATGGAAGTGGTAGAGTTGATTGTCACCATTGTTGTGGAAGAGGGAGGACAAATTTTGTTCACCTAGAAATGCTTCCAAAAGGGGAATGGCCAAAATGGTGCAGGACTTGTGGAGGGAGTGGTCTCGGCTACTGCTCCCGTTGCCTCGGGACAGGAGAGTATCGATATATTATGGGGTTCCAATTCATGAAGATGGAAAACAATGAAACTCAGGATCTTAAGAAGTATGAGGATCAAGCCCAGCAATATCCCAGAAGCGCAGATTCTCTTCTAAATGATGAGTTGAGTTCAGAGCCAGAAATATGA

Protein sequence

MAARTTPIVLPAVQLKATDSNGVTPSRSSFPSLSIPKPSWIVRTESNVRREKRKKPDPPCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNETQDLKKYEDQAQQYPRSADSLLNDELSSEPEI

Homology

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BLAST of Lsi09G018660 vs. ExPASy Swiss-Prot
Match: A0A2K3DZC4 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=BSD2 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.7e-05
Identity = 28/80 (35.00%), Postives = 36/80 (45.00%), Query Frame = 0


Query: 54  KKPDPPCVICNGSGRVDCHHCCGRGRTNFVHLEML----------------PKGEW--PK 113
           KK   PC +C G+G + C  C G GR   V  + L                P G    P+
Sbjct: 72  KKDPVPCSLCQGTGGIRCFACGGDGRNATVSRDDLYDSKALGGGVAPPKRDPLGRTINPR 131

Query: 114 WCRTCGGSGLGYCSRCLGTG 116
            C+ C G+GL  CS+C GTG
Sbjct: 132 DCKVCRGAGLVLCSQCKGTG 151

[Close]

BLAST of Lsi09G018660 vs. ExPASy TrEMBL
Match: A0A1S3CCX7 (uncharacterized protein LOC103498991 OS=Cucumis melo OX=3656 GN=LOC103498991 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.2e-77
Identity = 138/153 (90.20%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MAARTTPIVLPAVQLKATDSNGVTPSRSS--FPSLSIPKPSWIVRTESNVRREKRKKPDP 60
           MAARTTPI+LPAVQLKATDSNGVTPSR+S   P LSIPKPSWIVRTESNVRREKRKKPDP
Sbjct: 1   MAARTTPIILPAVQLKATDSNGVTPSRNSTYLPRLSIPKPSWIVRTESNVRREKRKKPDP 60

Query: 61  PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYR 120
           PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYR
Sbjct: 61  PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYR 120

Query: 121 YIMGFQFMKMENNETQDLKKYEDQAQQYPRSAD 152
           YIMGFQFMKMENNE++D KKY DQ +Q+P SA+
Sbjct: 121 YIMGFQFMKMENNESKDPKKYNDQTKQHPGSAN 153

[Close]

BLAST of Lsi09G018660 vs. ExPASy TrEMBL
Match: A0A5D3DLS3 (Protein SPA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00800 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.9e-76
Identity = 137/153 (89.54%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MAARTTPIVLPAVQLKATDSNGVTPSR--SSFPSLSIPKPSWIVRTESNVRREKRKKPDP 60
           MAARTTPI+L AVQLKATDSNGVTPSR  +S P LSIPKPSWIVRTESNVRREKRKKPDP
Sbjct: 1   MAARTTPIILLAVQLKATDSNGVTPSRNSTSLPRLSIPKPSWIVRTESNVRREKRKKPDP 60

Query: 61  PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYR 120
           PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYR
Sbjct: 61  PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYR 120

Query: 121 YIMGFQFMKMENNETQDLKKYEDQAQQYPRSAD 152
           YIMGFQFMKMENNE++D KKY+DQ +Q+P SA+
Sbjct: 121 YIMGFQFMKMENNESKDPKKYDDQTKQHPGSAN 153

[Close]

BLAST of Lsi09G018660 vs. ExPASy TrEMBL
Match: A0A6J1KM14 (uncharacterized protein LOC111494509 OS=Cucurbita maxima OX=3661 GN=LOC111494509 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.5e-75
Identity = 141/171 (82.46%), Postives = 152/171 (88.89%), Query Frame = 0


Query: 1   MAARTTPIVLPAVQLKATDSNGVTP--SRSSFPSLSIPKPSWIVRTESNVRREKRKKPDP 60
           MAA TT IVLPA+QLKATDSNGV P  + +SFP LSIPKPSWIVRTESNVRREKRKKPDP
Sbjct: 1   MAASTTQIVLPAIQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP 60

Query: 61  PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYR 120
           PC IC+GSGRVDCH+CCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTG+YR
Sbjct: 61  PCAICHGSGRVDCHNCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGDYR 120

Query: 121 YIMGFQFMKMEN--NETQDLKKYEDQAQQY---PRSADSLLNDELSSEPEI 165
           YIMGFQFMKME+  NETQD+ KYE+Q  Q    PR A+SLL+DE SSEPEI
Sbjct: 121 YIMGFQFMKMEDNENETQDVMKYENQTNQQCRGPRGAESLLHDESSSEPEI 171

[Close]

BLAST of Lsi09G018660 vs. ExPASy TrEMBL
Match: A0A6J1HHM2 (uncharacterized protein LOC111464401 OS=Cucurbita moschata OX=3662 GN=LOC111464401 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.0e-74
Identity = 142/171 (83.04%), Postives = 150/171 (87.72%), Query Frame = 0


Query: 1   MAARTTPIVLPAVQLKATDSNGVTP--SRSSFPSLSIPKPSWIVRTESNVRREKRKKPDP 60
           MAARTTPIVLPAVQLKATDSNGV P  + +SFP LSIPKPSWIVRTESNVRREKRKKPDP
Sbjct: 1   MAARTTPIVLPAVQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP 60

Query: 61  PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYR 120
           PC IC+GSGRVDCH CCGRGRTN VHLEMLPKGEWPKWCR CGGSGLGYCSRCLGTGEYR
Sbjct: 61  PCAICHGSGRVDCHDCCGRGRTNSVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR 120

Query: 121 YIMGFQFMKMEN--NETQDLKKYEDQAQQY---PRSADSLLNDELSSEPEI 165
           YIMGFQFMKME+  NETQD+ KYE+Q  Q    P  A+SLL+DE SSEPEI
Sbjct: 121 YIMGFQFMKMEDNENETQDVMKYENQTNQQRRGPGGAESLLHDESSSEPEI 171

[Close]

BLAST of Lsi09G018660 vs. ExPASy TrEMBL
Match: A0A6J1DNB8 (uncharacterized protein LOC111022804 OS=Momordica charantia OX=3673 GN=LOC111022804 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 8.7e-74
Identity = 137/162 (84.57%), Postives = 145/162 (89.51%), Query Frame = 0


Query: 1   MAARTTPIVLPAVQLKATDSNGVTP----SRSSFPSLSIPKPSWIVRTESNVRREKRKKP 60
           MAAR   ++   VQLKATDSNGVTP    + + FP LSIPKPSWIV+TESNVRREKRKKP
Sbjct: 1   MAARAPIVLAAVVQLKATDSNGVTPPPPRNSTPFPRLSIPKPSWIVKTESNVRREKRKKP 60

Query: 61  DPPCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGE 120
           DPPCV CNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGE
Sbjct: 61  DPPCVKCNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGE 120

Query: 121 YRYIMGFQFMKMENNETQDLKKYEDQA-QQYPRSADSLLNDE 158
           YRYIMGFQFMKMENNET+DLKK E+QA QQ+ RSADSLLNDE
Sbjct: 121 YRYIMGFQFMKMENNETEDLKKNENQANQQHHRSADSLLNDE 162

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BLAST of Lsi09G018660 vs. NCBI nr
Match: XP_038906930.1 (uncharacterized protein LOC120092800 [Benincasa hispida])

HSP 1 Score: 314.7 bits (805), Expect = 4.7e-82
Identity = 148/161 (91.93%), Postives = 153/161 (95.03%), Query Frame = 0


Query: 1   MAARTTPIVLPAVQLKATDSNGVTPSRSS--FPSLSIPKPSWIVRTESNVRREKRKKPDP 60
           MAA TTPIVLPAVQLKATDSNGVTP R+S   P LSIPKPSWIVRTESNVRREKRKKPDP
Sbjct: 1   MAAGTTPIVLPAVQLKATDSNGVTPPRNSTPLPRLSIPKPSWIVRTESNVRREKRKKPDP 60

Query: 61  PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYR 120
           PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKG+WP+WCRTCGGSGLGYCSRCLGTGEYR
Sbjct: 61  PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGKWPRWCRTCGGSGLGYCSRCLGTGEYR 120

Query: 121 YIMGFQFMKMENNETQDLKKYEDQAQQYPRSADSLLNDELS 160
           YIMGFQFMKMENNETQDLKKYEDQ +Q+PRSADSLLNDE S
Sbjct: 121 YIMGFQFMKMENNETQDLKKYEDQVKQHPRSADSLLNDEES 161

[Close]

BLAST of Lsi09G018660 vs. NCBI nr
Match: XP_008460069.1 (PREDICTED: uncharacterized protein LOC103498991 [Cucumis melo])

HSP 1 Score: 298.1 bits (762), Expect = 4.6e-77
Identity = 138/153 (90.20%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MAARTTPIVLPAVQLKATDSNGVTPSRSS--FPSLSIPKPSWIVRTESNVRREKRKKPDP 60
           MAARTTPI+LPAVQLKATDSNGVTPSR+S   P LSIPKPSWIVRTESNVRREKRKKPDP
Sbjct: 1   MAARTTPIILPAVQLKATDSNGVTPSRNSTYLPRLSIPKPSWIVRTESNVRREKRKKPDP 60

Query: 61  PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYR 120
           PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYR
Sbjct: 61  PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYR 120

Query: 121 YIMGFQFMKMENNETQDLKKYEDQAQQYPRSAD 152
           YIMGFQFMKMENNE++D KKY DQ +Q+P SA+
Sbjct: 121 YIMGFQFMKMENNESKDPKKYNDQTKQHPGSAN 153

[Close]

BLAST of Lsi09G018660 vs. NCBI nr
Match: KAA0039964.1 (protein SPA [Cucumis melo var. makuwa] >TYK24538.1 protein SPA [Cucumis melo var. makuwa])

HSP 1 Score: 295.0 bits (754), Expect = 3.9e-76
Identity = 137/153 (89.54%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MAARTTPIVLPAVQLKATDSNGVTPSR--SSFPSLSIPKPSWIVRTESNVRREKRKKPDP 60
           MAARTTPI+L AVQLKATDSNGVTPSR  +S P LSIPKPSWIVRTESNVRREKRKKPDP
Sbjct: 1   MAARTTPIILLAVQLKATDSNGVTPSRNSTSLPRLSIPKPSWIVRTESNVRREKRKKPDP 60

Query: 61  PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYR 120
           PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYR
Sbjct: 61  PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYR 120

Query: 121 YIMGFQFMKMENNETQDLKKYEDQAQQYPRSAD 152
           YIMGFQFMKMENNE++D KKY+DQ +Q+P SA+
Sbjct: 121 YIMGFQFMKMENNESKDPKKYDDQTKQHPGSAN 153

[Close]

BLAST of Lsi09G018660 vs. NCBI nr
Match: XP_023513705.1 (uncharacterized protein LOC111778233 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 294.3 bits (752), Expect = 6.6e-76
Identity = 143/171 (83.63%), Postives = 151/171 (88.30%), Query Frame = 0


Query: 1   MAARTTPIVLPAVQLKATDSNGVTP--SRSSFPSLSIPKPSWIVRTESNVRREKRKKPDP 60
           MAARTTPIVLPA+QLKATDSNGV P  + +SFP LSIPKPSWIVRTESNVRREKRKKPDP
Sbjct: 1   MAARTTPIVLPAIQLKATDSNGVIPPSNSTSFPRLSIPKPSWIVRTESNVRREKRKKPDP 60

Query: 61  PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYR 120
           PC IC+GSGRVDCH CCGRGRTNFVHLEMLPKGEWPKWCR CGGSGLGYCSRCLGTGEYR
Sbjct: 61  PCAICHGSGRVDCHDCCGRGRTNFVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR 120

Query: 121 YIMGFQFMKMEN--NETQDLKKYEDQAQQY---PRSADSLLNDELSSEPEI 165
           YIMGFQFMKME+  NETQD+ KYE+Q  Q    PR A+SLL DE SSEPEI
Sbjct: 121 YIMGFQFMKMEDNENETQDVMKYENQTNQQHRGPRGAESLLRDESSSEPEI 171

[Close]

BLAST of Lsi09G018660 vs. NCBI nr
Match: KAG6593729.1 (hypothetical protein SDJN03_13205, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026068.1 hypothetical protein SDJN02_12566 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 291.6 bits (745), Expect = 4.3e-75
Identity = 142/171 (83.04%), Postives = 150/171 (87.72%), Query Frame = 0


Query: 1   MAARTTPIVLPAVQLKATDSNGVTP--SRSSFPSLSIPKPSWIVRTESNVRREKRKKPDP 60
           MAARTTPIVLPA+QLKATDSNGV P  + +SFP LSIPKPSWIVRTESNVRREKRKKPDP
Sbjct: 1   MAARTTPIVLPAIQLKATDSNGVIPPSNATSFPRLSIPKPSWIVRTESNVRREKRKKPDP 60

Query: 61  PCVICNGSGRVDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYR 120
           PC IC+GSGRVDCH CCGRGRTNFVHLEMLPKGEWPKWCR CGGSGLGYCSRCLGTGEYR
Sbjct: 61  PCAICHGSGRVDCHDCCGRGRTNFVHLEMLPKGEWPKWCRACGGSGLGYCSRCLGTGEYR 120

Query: 121 YIMGFQFMKMEN--NETQDLKKYEDQAQQY---PRSADSLLNDELSSEPEI 165
           YIMGFQFMKME+  NETQD+ KYE+Q  Q    P  A+SLL DE SSEPEI
Sbjct: 121 YIMGFQFMKMEDSENETQDVMKYENQTNQQRRGPGGAESLLRDESSSEPEI 171

[Close]

BLAST of Lsi09G018660 vs. TAIR 10
Match: AT3G17668.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-37
Identity = 69/123 (56.10%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 11  PAVQLKATDSNGVTPSRSS--FPSLSIPKPSWIVRTESNVRREKRKKPDPPCVICNGSGR 70
           P   +      GV  S+S+     L + KPSWIVRT+S  +   + K    CVIC+GSGR
Sbjct: 9   PPEMMAVRPGEGVPNSKSTQGKTRLYLTKPSWIVRTQSGAKTCMKSKAKGRCVICHGSGR 68

Query: 71  VDCHHCCGRGRTNFVHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKM 130
           VDC +CCG+GRTN V +EMLP+GEWPKWC++CGGSGL  CSRCLGTGEYRYIMGF+F+  
Sbjct: 69  VDCFNCCGKGRTNCVDVEMLPRGEWPKWCKSCGGSGLSDCSRCLGTGEYRYIMGFRFLNQ 128

Query: 131 ENN 132
            ++
Sbjct: 129 NDD 131

The following BLAST results are available for this feature:

BLAST of Lsi09G018660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A2K3DZC4	3.7e-05	35.00	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Chlamydomonas reinhardtii OX...	[more]

BLAST of Lsi09G018660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CCX7	2.2e-77	90.20	uncharacterized protein LOC103498991 OS=Cucumis melo OX=3656 GN=LOC103498991 PE=...	[more]
A0A5D3DLS3	1.9e-76	89.54	Protein SPA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00800 PE...	[more]
A0A6J1KM14	3.5e-75	82.46	uncharacterized protein LOC111494509 OS=Cucurbita maxima OX=3661 GN=LOC111494509...	[more]
A0A6J1HHM2	1.0e-74	83.04	uncharacterized protein LOC111464401 OS=Cucurbita moschata OX=3662 GN=LOC1114644...	[more]
A0A6J1DNB8	8.7e-74	84.57	uncharacterized protein LOC111022804 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of Lsi09G018660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906930.1	4.7e-82	91.93	uncharacterized protein LOC120092800 [Benincasa hispida]	[more]
XP_008460069.1	4.6e-77	90.20	PREDICTED: uncharacterized protein LOC103498991 [Cucumis melo]	[more]
KAA0039964.1	3.9e-76	89.54	protein SPA [Cucumis melo var. makuwa] >TYK24538.1 protein SPA [Cucumis melo var...	[more]
XP_023513705.1	6.6e-76	83.63	uncharacterized protein LOC111778233 [Cucurbita pepo subsp. pepo]	[more]
KAG6593729.1	4.3e-75	83.04	hypothetical protein SDJN03_13205, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lsi09G018660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17668.1	1.3e-37	56.10	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..164
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 24..130
None	No IPR available	PANTHER	PTHR15852:SF54	OSJNBA0086O06.7 PROTEIN	coord: 24..130
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 59..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G018660.1	Lsi09G018660.1	mRNA