Lsi09G016890 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G016890
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	MYB transcription factor
Location	chr09: 25365845 .. 25367857 (+)
RNA-Seq Expression	Lsi09G016890
Synteny	Lsi09G016890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAACGTGTTGGAAATGCTTGAGGAGGGAAGTGGGCAATAACCGTCTCAACCGCCACATCGCTTCAACAAAAAACCAATTAAACAAAAATAAAAAAAATTAAATTGAACCCAAAATCTTCAAGAAATCAAGCATATATCTGCAAGAACAAACCCCTGCATGCTTAAACATAAACTACAATTACCATTTTTCTGCGAAAAGAAAAATTTGAAGATGGAGTTGCAGAAACTTAGTGCTCTGTGAGGGAAAAACAGCAATGGAAGAAAGAGGATCACACGAAGTTTTAAGGAAAGGGCCATGGAAACTTGAGGAAGATGAAGTGCTTTTGAACCATGTTAACCGTTTCGGCCCCAGAGACTGGAGCTCCATTCGATCCAAAGGCCTTCTTCAGCGGACCGGCAAGTCCTGCCGTCTTCGTTGGGTTAATAAACTCAGACCCAACTTGAAGAAGTAACCAATTTTTGCTTGGCTGCCATTAATTTTCTTTCCTTCCTTTTTCTTTTGGTTTTTCTTGATGAATTCGAAGGTGTTTGATGTGGGTTGTGGATTGAAGTTTTCGTGTTCAGTTTTTGTTGTTTGTTCTATCTGTTTTGTTTACAGAGTTTATTTGTGCCTGCAAACTGTTTGAAAAAATGACTGATAGAGTAATTTCAATATTGTGCTTCTTCAGATTGTGGTATGGATTTTTTCCATTTTTTTTCCGCGAGACTCCGATTTATTTTCTTAGAATATGAATTTTTGTGTTTTGTTTTTCTGTGTTCCCCTAAATCCGGCAAGTGGGTTGTTTTTGTTGACTATTTTGTCTATGTGCTTGCACACTGTTTGTGAAAATGTCTGAAAGAGTGATTTCTTGACCATGCTGCAATTCATGGCTTTTTTTCCCACGAGATTGCAAATTTAATTTCTTAGAATATGTGCTTATGTGTTTGGTTTTTTTTGTGCTCCCTCATTTCCGGCAAGTGGGTGCAAGTTCACAGCAGAGGAGGAAAGAGTGGTGATAGAATTGCAGGCGCAGTTCGGGAACAAATGGGCGAAGATAGCGACTTACTTACCGGGCCGGACTGATAATGATGTGAAGAATTTTTGGAGTAGCAGGCAGAAGAGATTGGCTAGGCTTCTGCAGACATCAACTGCTCCATCCAAATTGCAGAGAAGCGCTAAGAAGGAAAAACCAGTTGATTTTGATGTTCCCTCCATGGAGGTATTTTCTTTGCTAAATTAATATCTCGTTATGTCTTAGATTCAAAATTTCTTGTAGTTTTAGGACTTTTAGTTTTGATTAAGATGCAAGAATTGTCTGAATTGAGATGCATAATAGTCATTTCGAAGACGAAATACGAGTGCTGTTTTTTCATGTGTTAAAATGGATTATGGTGATTAATGTTGTTGGTTTGATCTTTATCAGTTTGCTAACAAAATCTTAATGATTAAGAGGCATTATGATGCTTCTTTTTGTTGAAGTTTCTTCAGATTTTGGTGATTTTTGCAATTTCTATAACTGTTATCTCCTACTTTCAAGGCACCAAAGCTGAGCTCTGCATCAGAGGGGGAGTCATCCTCAAGGCCAATGTCATGTTCGTCGTCCTGCTGTGCCGATAATGCTGAAGCTGTTAATATGTTCTGCTCGTTGCCAGATCTGTACAGTCCTAAATTACTTGGTTTTGGCCAAGACTTTCTTCAACCAGAATTCAACTCATTTCAGACAATAATCAAATCCGAACCACAAACCAATTACCCCTCAACCAATTTCCACACTCAACCACTAAGTTCAACATTTTCATCTCAAGGACTCCATGATCCCAACTTTGATGTTTTTCTTGAAGCTTTGGATGTTTCTCAATTAAATAACGAAGTTCAATTTCCATTCGGGCTACAGTTCTATGAACCGATGGGATGTTGCTCGAGTCATGATGTTGTAAGGGAGAACGTTGACAACCCAGAAAGCATCTTCAGCGAGTTTCCTGCAGACATATTTGATCATATAGAACCGCTTCCGAGCTCACCGGAGAACTGA

mRNA sequence

AGAACGTGTTGGAAATGCTTGAGGAGGGAAGTGGGCAATAACCGTCTCAACCGCCACATCGCTTCAACAAAAAACCAATTAAACAAAAATAAAAAAAATTAAATTGAACCCAAAATCTTCAAGAAATCAAGCATATATCTGCAAGAACAAACCCCTGCATGCTTAAACATAAACTACAATTACCATTTTTCTGCGAAAAGAAAAATTTGAAGATGGAGTTGCAGAAACTTAGTGCTCTGTGAGGGAAAAACAGCAATGGAAGAAAGAGGATCACACGAAGTTTTAAGGAAAGGGCCATGGAAACTTGAGGAAGATGAAGTGCTTTTGAACCATGTTAACCGTTTCGGCCCCAGAGACTGGAGCTCCATTCGATCCAAAGGCCTTCTTCAGCGGACCGGCAAGTCCTGCCGTCTTCGTTGGGTTAATAAACTCAGACCCAACTTGAAGAAAATATGTGCTTATGTGTTTGGTTTTTTTTGTGCTCCCTCATTTCCGGCAAGTGGGTGCAAGTTCACAGCAGAGGAGGAAAGAGTGGTGATAGAATTGCAGGCGCAGTTCGGGAACAAATGGGCGAAGATAGCGACTTACTTACCGGGCCGGACTGATAATGATGTGAAGAATTTTTGGAGTAGCAGGCAGAAGAGATTGGCTAGGCTTCTGCAGACATCAACTGCTCCATCCAAATTGCAGAGAAGCGCTAAGAAGGAAAAACCAGTTGATTTTGATGTTCCCTCCATGGAGGCACCAAAGCTGAGCTCTGCATCAGAGGGGGAGTCATCCTCAAGGCCAATGTCATGTTCGTCGTCCTGCTGTGCCGATAATGCTGAAGCTGTTAATATGTTCTGCTCGTTGCCAGATCTGTACAGTCCTAAATTACTTGGTTTTGGCCAAGACTTTCTTCAACCAGAATTCAACTCATTTCAGACAATAATCAAATCCGAACCACAAACCAATTACCCCTCAACCAATTTCCACACTCAACCACTAAGTTCAACATTTTCATCTCAAGGACTCCATGATCCCAACTTTGATGTTTTTCTTGAAGCTTTGGATGTTTCTCAATTAAATAACGAAGTTCAATTTCCATTCGGGCTACAGTTCTATGAACCGATGGGATGTTGCTCGAGTCATGATGTTGTAAGGGAGAACGTTGACAACCCAGAAAGCATCTTCAGCGAGTTTCCTGCAGACATATTTGATCATATAGAACCGCTTCCGAGCTCACCGGAGAACTGA

Coding sequence (CDS)

ATGGAAGAAAGAGGATCACACGAAGTTTTAAGGAAAGGGCCATGGAAACTTGAGGAAGATGAAGTGCTTTTGAACCATGTTAACCGTTTCGGCCCCAGAGACTGGAGCTCCATTCGATCCAAAGGCCTTCTTCAGCGGACCGGCAAGTCCTGCCGTCTTCGTTGGGTTAATAAACTCAGACCCAACTTGAAGAAAATATGTGCTTATGTGTTTGGTTTTTTTTGTGCTCCCTCATTTCCGGCAAGTGGGTGCAAGTTCACAGCAGAGGAGGAAAGAGTGGTGATAGAATTGCAGGCGCAGTTCGGGAACAAATGGGCGAAGATAGCGACTTACTTACCGGGCCGGACTGATAATGATGTGAAGAATTTTTGGAGTAGCAGGCAGAAGAGATTGGCTAGGCTTCTGCAGACATCAACTGCTCCATCCAAATTGCAGAGAAGCGCTAAGAAGGAAAAACCAGTTGATTTTGATGTTCCCTCCATGGAGGCACCAAAGCTGAGCTCTGCATCAGAGGGGGAGTCATCCTCAAGGCCAATGTCATGTTCGTCGTCCTGCTGTGCCGATAATGCTGAAGCTGTTAATATGTTCTGCTCGTTGCCAGATCTGTACAGTCCTAAATTACTTGGTTTTGGCCAAGACTTTCTTCAACCAGAATTCAACTCATTTCAGACAATAATCAAATCCGAACCACAAACCAATTACCCCTCAACCAATTTCCACACTCAACCACTAAGTTCAACATTTTCATCTCAAGGACTCCATGATCCCAACTTTGATGTTTTTCTTGAAGCTTTGGATGTTTCTCAATTAAATAACGAAGTTCAATTTCCATTCGGGCTACAGTTCTATGAACCGATGGGATGTTGCTCGAGTCATGATGTTGTAAGGGAGAACGTTGACAACCCAGAAAGCATCTTCAGCGAGTTTCCTGCAGACATATTTGATCATATAGAACCGCTTCCGAGCTCACCGGAGAACTGA

Protein sequence

MEERGSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKKICAYVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQKRLARLLQTSTAPSKLQRSAKKEKPVDFDVPSMEAPKLSSASEGESSSRPMSCSSSCCADNAEAVNMFCSLPDLYSPKLLGFGQDFLQPEFNSFQTIIKSEPQTNYPSTNFHTQPLSSTFSSQGLHDPNFDVFLEALDVSQLNNEVQFPFGLQFYEPMGCCSSHDVVRENVDNPESIFSEFPADIFDHIEPLPSSPEN

Homology

[Close]

BLAST of Lsi09G016890 vs. ExPASy Swiss-Prot
Match: A0A178VEK7 (Transcription factor DUO1 OS=Arabidopsis thaliana OX=3702 GN=DUO1 PE=1 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 5.4e-56
Identity = 140/327 (42.81%), Postives = 179/327 (54.74%), Query Frame = 0


Query: 8   EVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKKIC 67
           E ++KGPWK EEDEVL+NHV R+GPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLK   
Sbjct: 9   EEIKKGPWKAEEDEVLINHVKRYGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLK--- 68

Query: 68  AYVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSR 127
                         +GCKF+A+EER VIELQ++FGNKWA+IATYLPGRTDNDVKNFWSSR
Sbjct: 69  --------------NGCKFSADEERTVIELQSEFGNKWARIATYLPGRTDNDVKNFWSSR 128

Query: 128 QKRLARLLQTSTAPSKLQRSAKKEKPVDFDVPSMEAPKLSSASEG---ESSSRPMSCSSS 187
           QKRLAR+L  S+  S    + K          +++  + SS   G   E  +   SCS  
Sbjct: 129 QKRLARILHNSSDASSSSFNPKSSSSHRLKGKNVKPIRQSSQGFGLVEEEVTVSSSCSQM 188

Query: 188 CCADNAEAVNMFCSLPDL---YSPKLLGFGQDFLQPEFNSFQTIIKSEPQTNYPSTNFHT 247
               + +  +    LPDL      +   FG D +  E++               S N   
Sbjct: 189 VPYSSDQVGDEVLRLPDLGVKLEHQPFAFGTDLVLAEYSD--------------SQNDAN 248

Query: 248 QPLSSTFSSQG------LHDPNFDVFLEALDVSQLNNEVQFPFGLQFYEPMGCCSSHDVV 307
           Q   S FS +       L DP +   L   D    ++E  F     F+EP         V
Sbjct: 249 QQAISPFSPESRELLARLDDPFYYDILGPAD----SSEPLFALPQPFFEPSPVPRRCRHV 299

Query: 308 RENVDNPESIFSEFPADIFDHIEPLPS 323
            ++ +  +    +FPAD+FD ++P+PS
Sbjct: 309 SKD-EEADVFLDDFPADMFDQVDPIPS 299

[Close]

BLAST of Lsi09G016890 vs. ExPASy Swiss-Prot
Match: Q0JB89 (Probable transcription factor MYB58 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB58 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.9e-49
Identity = 114/185 (61.62%), Postives = 123/185 (66.49%), Query Frame = 0


Query: 5   GSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLK 64
           G  E LRKGPW  EEDEVLL HV   GP DWSSIRSKGLL RTGKSCRLRWVNKLRPNLK
Sbjct: 24  GGGEALRKGPWMAEEDEVLLEHVRTHGPMDWSSIRSKGLLPRTGKSCRLRWVNKLRPNLK 83

Query: 65  KICAYVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDVKNFW 124
                            SGCKFTAEEERVVIELQAQFGNKWA+IATYL GRTDNDVKNFW
Sbjct: 84  -----------------SGCKFTAEEERVVIELQAQFGNKWARIATYLQGRTDNDVKNFW 143

Query: 125 SSRQKRLARLLQ---TSTAPSKLQRSAKKEKPVDFDVPSMEAP-KLSSASEGESSSRPMS 184
           S+RQKRLARLL+    +  P+K   S K + P    + S  A    SSAS  ++S    S
Sbjct: 144 STRQKRLARLLRGPLPAARPNK-HNSGKGKAPSSSSLDSQTATFHQSSASLDQASLEGNS 190

Query: 185 CSSSC 186
               C
Sbjct: 204 LGWQC 190

[Close]

BLAST of Lsi09G016890 vs. ExPASy Swiss-Prot
Match: Q94FL7 (Transcription factor MYB120 OS=Arabidopsis thaliana OX=3702 GN=MYB120 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.6e-29
Identity = 60/125 (48.00%), Postives = 80/125 (64.00%), Query Frame = 0


Query: 9   VLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKKICA 68
           +L+KGPW   EDE+L  +V   G  +W++++    L R GKSCRLRW N LRPNLKK   
Sbjct: 25  ILKKGPWTAAEDEILAAYVRENGEGNWNAVQKNTGLARCGKSCRLRWANHLRPNLKK--- 84

Query: 69  YVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQ 128
                            FT +EER++I+L AQ GNKWA++A  LPGRTDN++KN+W++R 
Sbjct: 85  ---------------GSFTGDEERLIIQLHAQLGNKWARMAAQLPGRTDNEIKNYWNTRL 131

Query: 129 KRLAR 134
           KRL R
Sbjct: 145 KRLLR 131

[Close]

BLAST of Lsi09G016890 vs. ExPASy Swiss-Prot
Match: A2WW87 (Transcription factor GAMYB OS=Oryza sativa subsp. indica OX=39946 GN=GAM1 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 9.6e-29
Identity = 60/130 (46.15%), Postives = 84/130 (64.62%), Query Frame = 0


Query: 4   RGSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNL 63
           RG    L+KGPW   ED +L+++V + G  +W++++    L R GKSCRLRW N LRPNL
Sbjct: 34  RGGGPPLKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNL 93

Query: 64  KKICAYVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDVKNF 123
           KK                    FTAEEER++I+L ++ GNKWA++A +LPGRTDN++KN+
Sbjct: 94  KK------------------GAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNY 145

Query: 124 WSSRQKRLAR 134
           W++R KR  R
Sbjct: 154 WNTRIKRCQR 145

[Close]

BLAST of Lsi09G016890 vs. ExPASy Swiss-Prot
Match: Q0JIC2 (Transcription factor GAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=GAMYB PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 9.6e-29
Identity = 60/130 (46.15%), Postives = 84/130 (64.62%), Query Frame = 0


Query: 4   RGSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNL 63
           RG    L+KGPW   ED +L+++V + G  +W++++    L R GKSCRLRW N LRPNL
Sbjct: 34  RGGGPPLKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNL 93

Query: 64  KKICAYVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDVKNF 123
           KK                    FTAEEER++I+L ++ GNKWA++A +LPGRTDN++KN+
Sbjct: 94  KK------------------GAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNY 145

Query: 124 WSSRQKRLAR 134
           W++R KR  R
Sbjct: 154 WNTRIKRCQR 145

[Close]

BLAST of Lsi09G016890 vs. ExPASy TrEMBL
Match: A0A5A7T9S7 (Myb-related protein 308-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002720 PE=4 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.6e-148
Identity = 274/328 (83.54%), Postives = 283/328 (86.28%), Query Frame = 0


Query: 1   MEER--GSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNK 60
           ME+R   SHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNK
Sbjct: 1   MEDRRSQSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNK 60

Query: 61  LRPNLKKICAYVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDN 120
           LRPNLK                 +GCKFTAEEE++VIELQAQFGNKWAKIATYLPGRTDN
Sbjct: 61  LRPNLK-----------------NGCKFTAEEEKMVIELQAQFGNKWAKIATYLPGRTDN 120

Query: 121 DVKNFWSSRQKRLARLLQTSTAPSKLQRSAKKEKPVDFDVPSMEAPKLSSASEGESSSRP 180
           DVKNFWSSRQKRLARLLQTS APSKLQRSAKKE PVDFD+P+MEAPKLSSASEGESSSRP
Sbjct: 121 DVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKETPVDFDIPTMEAPKLSSASEGESSSRP 180

Query: 181 MSCSSSCCADNAEAVNMFCSLPDLYSPKLLGFGQDFLQPEFNSFQTIIKSEPQTNYPSTN 240
           M C SSC AD  E VNMFCSLPD Y PKLLGFGQDFLQPEFNSFQT IK E Q     +N
Sbjct: 181 MLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQDFLQPEFNSFQTSIKFEQQ-----SN 240

Query: 241 FHTQPLSSTFSSQGLHDPNFDVFLEALDVSQLNNEVQFPFGLQFYEPMGCCSSHDVVREN 300
           FHTQ LSSTFSSQGLHDPNFDVFLE LDVSQL NEVQFP GLQFYEP+GCCSSHD VREN
Sbjct: 241 FHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFPSGLQFYEPIGCCSSHDDVREN 300

Query: 301 VDNPESIFSEFPADIFDHIEPLPSSPEN 327
           VDNPES FSEFPADIF+HIEP PSSPEN
Sbjct: 301 VDNPESFFSEFPADIFEHIEPPPSSPEN 306

[Close]

BLAST of Lsi09G016890 vs. ExPASy TrEMBL
Match: A0A1S3CB01 (myb-related protein 308-like OS=Cucumis melo OX=3656 GN=LOC103498816 PE=4 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.6e-148
Identity = 274/328 (83.54%), Postives = 283/328 (86.28%), Query Frame = 0


Query: 1   MEER--GSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNK 60
           ME+R   SHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNK
Sbjct: 1   MEDRRSQSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNK 60

Query: 61  LRPNLKKICAYVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDN 120
           LRPNLK                 +GCKFTAEEE++VIELQAQFGNKWAKIATYLPGRTDN
Sbjct: 61  LRPNLK-----------------NGCKFTAEEEKMVIELQAQFGNKWAKIATYLPGRTDN 120

Query: 121 DVKNFWSSRQKRLARLLQTSTAPSKLQRSAKKEKPVDFDVPSMEAPKLSSASEGESSSRP 180
           DVKNFWSSRQKRLARLLQTS APSKLQRSAKKE PVDFD+P+MEAPKLSSASEGESSSRP
Sbjct: 121 DVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKETPVDFDIPTMEAPKLSSASEGESSSRP 180

Query: 181 MSCSSSCCADNAEAVNMFCSLPDLYSPKLLGFGQDFLQPEFNSFQTIIKSEPQTNYPSTN 240
           M C SSC AD  E VNMFCSLPD Y PKLLGFGQDFLQPEFNSFQT IK E Q     +N
Sbjct: 181 MLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQDFLQPEFNSFQTSIKFEQQ-----SN 240

Query: 241 FHTQPLSSTFSSQGLHDPNFDVFLEALDVSQLNNEVQFPFGLQFYEPMGCCSSHDVVREN 300
           FHTQ LSSTFSSQGLHDPNFDVFLE LDVSQL NEVQFP GLQFYEP+GCCSSHD VREN
Sbjct: 241 FHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFPSGLQFYEPIGCCSSHDDVREN 300

Query: 301 VDNPESIFSEFPADIFDHIEPLPSSPEN 327
           VDNPES FSEFPADIF+HIEP PSSPEN
Sbjct: 301 VDNPESFFSEFPADIFEHIEPPPSSPEN 306

[Close]

BLAST of Lsi09G016890 vs. ExPASy TrEMBL
Match: A0A6J1F3T0 (transcription factor DUO1-like OS=Cucurbita moschata OX=3662 GN=LOC111439723 PE=4 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 6.4e-145
Identity = 269/327 (82.26%), Postives = 279/327 (85.32%), Query Frame = 0


Query: 1   MEERGSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR 60
           MEE GS E LRKGPWKLEEDEVLLNHV RFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR
Sbjct: 1   MEESGSQEALRKGPWKLEEDEVLLNHVKRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR 60

Query: 61  PNLKKICAYVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDV 120
           PNLK                 +GCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDV
Sbjct: 61  PNLK-----------------NGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDV 120

Query: 121 KNFWSSRQKRLARLLQTSTAPSKLQRSAKKEKPVDFDVPSMEAPKLSSASEGESSSRPMS 180
           KNFWSSRQKRLARLLQ ST PSKLQRS +KEKPVDFDVPSMEAPKLSSAS+G++SSRPMS
Sbjct: 121 KNFWSSRQKRLARLLQNSTTPSKLQRSTRKEKPVDFDVPSMEAPKLSSASDGDASSRPMS 180

Query: 181 CSSSCCADNAEAVNMFCSLPDLYSPKLLGFGQDFLQPEFNSFQTIIKSEPQTNYPSTNFH 240
           CSSS  ADNAEAV+MFCSLPDLY PKLLGFGQDFLQPEFN F   IKS+PQ     TNFH
Sbjct: 181 CSSSFSADNAEAVDMFCSLPDLYRPKLLGFGQDFLQPEFNPFPITIKSDPQ-----TNFH 240

Query: 241 TQPLSSTFSSQG-LHDPNFDVFLEALDVSQLNNEVQFPFGLQFYEPMGCCSSHDVVRENV 300
             PL STFSSQG LHDPN DVFLE LDVSQL+NEVQFPFGLQFYEPMG CSSHDVVRENV
Sbjct: 241 PLPLGSTFSSQGLLHDPNIDVFLEPLDVSQLDNEVQFPFGLQFYEPMGRCSSHDVVRENV 300

Query: 301 DNPESIFSEFPADIFDHIEPLPSSPEN 327
           +NPES F+EFPADI D IE L SSPEN
Sbjct: 301 ENPESFFNEFPADILDQIELLSSSPEN 305

[Close]

BLAST of Lsi09G016890 vs. ExPASy TrEMBL
Match: A0A6J1I9W2 (transcription factor DUO1-like OS=Cucurbita maxima OX=3661 GN=LOC111472488 PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 5.5e-144
Identity = 266/327 (81.35%), Postives = 278/327 (85.02%), Query Frame = 0


Query: 1   MEERGSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR 60
           MEE GS E LRKGPWKLEEDEVLLNHV RFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR
Sbjct: 1   MEESGSQEALRKGPWKLEEDEVLLNHVKRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR 60

Query: 61  PNLKKICAYVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDV 120
           PNLK                 +GCKFTAEEER+VIELQAQFGNKWAKIATYLPGRTDNDV
Sbjct: 61  PNLK-----------------NGCKFTAEEERIVIELQAQFGNKWAKIATYLPGRTDNDV 120

Query: 121 KNFWSSRQKRLARLLQTSTAPSKLQRSAKKEKPVDFDVPSMEAPKLSSASEGESSSRPMS 180
           KNFWSSRQKRLARLLQ ST PSKLQRS +KEKPVDFDVPSMEAPKLSSAS+G++SSRPMS
Sbjct: 121 KNFWSSRQKRLARLLQNSTTPSKLQRSTRKEKPVDFDVPSMEAPKLSSASDGDASSRPMS 180

Query: 181 CSSSCCADNAEAVNMFCSLPDLYSPKLLGFGQDFLQPEFNSFQTIIKSEPQTNYPSTNFH 240
           CSSS  ADNAEAV+MFCSLPDLY PKLLGFGQDFLQPEFN F   IKS+PQ     TNFH
Sbjct: 181 CSSSFSADNAEAVDMFCSLPDLYRPKLLGFGQDFLQPEFNPFPITIKSDPQ-----TNFH 240

Query: 241 TQPLSSTFSSQG-LHDPNFDVFLEALDVSQLNNEVQFPFGLQFYEPMGCCSSHDVVRENV 300
             PL STFSSQG LHDPN D+FLE LDVSQL+NEVQFPFGLQFYEPMG CSSHDVV ENV
Sbjct: 241 PLPLGSTFSSQGLLHDPNIDIFLEPLDVSQLDNEVQFPFGLQFYEPMGRCSSHDVVSENV 300

Query: 301 DNPESIFSEFPADIFDHIEPLPSSPEN 327
           +NPES F+EFPADI D IE L SSPEN
Sbjct: 301 ENPESFFNEFPADILDQIELLSSSPEN 305

[Close]

BLAST of Lsi09G016890 vs. ExPASy TrEMBL
Match: A0A6J1DIB8 (transcription factor DUO1 OS=Momordica charantia OX=3673 GN=LOC111020746 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 1.1e-133
Identity = 257/330 (77.88%), Postives = 268/330 (81.21%), Query Frame = 0


Query: 1   MEERGS-HEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKL 60
           MEER S  EV+RKGPWKLEEDEVLLNHV RFGPRDWSSIRSKGLLQRTGKSCRLRWVNKL
Sbjct: 1   MEERVSEEEVIRKGPWKLEEDEVLLNHVKRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKL 60

Query: 61  RPNLKKICAYVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDND 120
           RPNLK                 +GCKFTAEEERVVIELQA+FGNKWAKIATYLPGRTDND
Sbjct: 61  RPNLK-----------------NGCKFTAEEERVVIELQARFGNKWAKIATYLPGRTDND 120

Query: 121 VKNFWSSRQKRLARLLQTSTAPSKLQRSAKKEKPVDFDVPSMEAPKLSSASEGESSSRPM 180
           VKNFWSSRQKRLARLLQ+ST PSKLQRS KKEKPVD + PSME  KLSSASEGESSSRPM
Sbjct: 121 VKNFWSSRQKRLARLLQSSTTPSKLQRSTKKEKPVDSNAPSMEVQKLSSASEGESSSRPM 180

Query: 181 SCSSSCCADNAEAVNMFCSLPDLYSPKLLGFGQDFLQPEFNSFQTIIKSEPQTNYPSTNF 240
           SCSSSCCA+NA  VN+FC  PD YS K LGFG +FLQPEF  FQT IKSEPQT + ST  
Sbjct: 181 SCSSSCCAENAAPVNIFCPWPDPYSSKFLGFGTNFLQPEFTPFQT-IKSEPQTEFSST-L 240

Query: 241 HTQPL--SSTFSSQGLHDPN-FDVFLEALDVSQLNNEVQFPFGLQFYEPMGCCSSHDVVR 300
           HTQPL   STF SQ LH P  FD FLE LDVS L NEVQFP G  F+EP+GCC SHDV R
Sbjct: 241 HTQPLDDDSTFLSQRLHGPGFFDDFLEPLDVSPLENEVQFPLGQPFFEPIGCCPSHDVER 300

Query: 301 ENVDNPESIFSEFPADIFDHIEPLPSSPEN 327
           E VDNPES FSEFPADIFD IEPLPSSPEN
Sbjct: 301 EKVDNPESFFSEFPADIFDRIEPLPSSPEN 311

[Close]

BLAST of Lsi09G016890 vs. NCBI nr
Match: XP_038906713.1 (transcription factor DUO1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 605.1 bits (1559), Expect = 3.5e-169
Identity = 301/326 (92.33%), Postives = 303/326 (92.94%), Query Frame = 0


Query: 1   MEERGSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR 60
           MEERGSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR
Sbjct: 1   MEERGSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR 60

Query: 61  PNLKKICAYVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDV 120
           PNLKK                 GCKFTAEEERVVIELQAQ GNKWAKIATYLPGRTDNDV
Sbjct: 61  PNLKK-----------------GCKFTAEEERVVIELQAQLGNKWAKIATYLPGRTDNDV 120

Query: 121 KNFWSSRQKRLARLLQTSTAPSKLQRSAKKEKPVDFDVPSMEAPKLSSASEGESSSRPMS 180
           KNFWSSRQKRLARLLQTSTAPSKLQRSAKKEKPV FDVPSMEAPKLSSASEGESSSRPMS
Sbjct: 121 KNFWSSRQKRLARLLQTSTAPSKLQRSAKKEKPVHFDVPSMEAPKLSSASEGESSSRPMS 180

Query: 181 CSSSCCADNAEAVNMFCSLPDLYSPKLLGFGQDFLQPEFNSFQTIIKSEPQTNYPSTNFH 240
           CSSSCCADNAEAVNMFCSLPDLYSPKL GFGQDFLQPEFNSFQT IKSEPQT+YPSTNFH
Sbjct: 181 CSSSCCADNAEAVNMFCSLPDLYSPKLFGFGQDFLQPEFNSFQTTIKSEPQTSYPSTNFH 240

Query: 241 TQPLSSTFSSQGLHDPNFDVFLEALDVSQLNNEVQFPFGLQFYEPMGCCSSHDVVRENVD 300
            QPLSSTFSSQGLHDPNFDVFLEALDVSQLNNEVQFPFGLQFYEPMGCCSSHDVVRENVD
Sbjct: 241 KQPLSSTFSSQGLHDPNFDVFLEALDVSQLNNEVQFPFGLQFYEPMGCCSSHDVVRENVD 300

Query: 301 NPESIFSEFPADIFDHIEPLPSSPEN 327
           NPES FSEFPADIFDHIEPLPSSP+N
Sbjct: 301 NPESFFSEFPADIFDHIEPLPSSPDN 309

[Close]

BLAST of Lsi09G016890 vs. NCBI nr
Match: XP_008459792.1 (PREDICTED: myb-related protein 308-like [Cucumis melo] >KAA0039783.1 myb-related protein 308-like protein [Cucumis melo var. makuwa] >TYK24714.1 myb-related protein 308-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 535.4 bits (1378), Expect = 3.4e-148
Identity = 274/328 (83.54%), Postives = 283/328 (86.28%), Query Frame = 0


Query: 1   MEER--GSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNK 60
           ME+R   SHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNK
Sbjct: 1   MEDRRSQSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNK 60

Query: 61  LRPNLKKICAYVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDN 120
           LRPNLK                 +GCKFTAEEE++VIELQAQFGNKWAKIATYLPGRTDN
Sbjct: 61  LRPNLK-----------------NGCKFTAEEEKMVIELQAQFGNKWAKIATYLPGRTDN 120

Query: 121 DVKNFWSSRQKRLARLLQTSTAPSKLQRSAKKEKPVDFDVPSMEAPKLSSASEGESSSRP 180
           DVKNFWSSRQKRLARLLQTS APSKLQRSAKKE PVDFD+P+MEAPKLSSASEGESSSRP
Sbjct: 121 DVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKETPVDFDIPTMEAPKLSSASEGESSSRP 180

Query: 181 MSCSSSCCADNAEAVNMFCSLPDLYSPKLLGFGQDFLQPEFNSFQTIIKSEPQTNYPSTN 240
           M C SSC AD  E VNMFCSLPD Y PKLLGFGQDFLQPEFNSFQT IK E Q     +N
Sbjct: 181 MLCLSSCRADYVEPVNMFCSLPDSYCPKLLGFGQDFLQPEFNSFQTSIKFEQQ-----SN 240

Query: 241 FHTQPLSSTFSSQGLHDPNFDVFLEALDVSQLNNEVQFPFGLQFYEPMGCCSSHDVVREN 300
           FHTQ LSSTFSSQGLHDPNFDVFLE LDVSQL NEVQFP GLQFYEP+GCCSSHD VREN
Sbjct: 241 FHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFPSGLQFYEPIGCCSSHDDVREN 300

Query: 301 VDNPESIFSEFPADIFDHIEPLPSSPEN 327
           VDNPES FSEFPADIF+HIEP PSSPEN
Sbjct: 301 VDNPESFFSEFPADIFEHIEPPPSSPEN 306

[Close]

BLAST of Lsi09G016890 vs. NCBI nr
Match: XP_004140627.1 (transcription factor DUO1 [Cucumis sativus] >KAE8646779.1 hypothetical protein Csa_005426 [Cucumis sativus])

HSP 1 Score: 529.3 bits (1362), Expect = 2.4e-146
Identity = 273/328 (83.23%), Postives = 284/328 (86.59%), Query Frame = 0


Query: 1   MEER--GSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNK 60
           MEER   SHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNK
Sbjct: 1   MEERRSQSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNK 60

Query: 61  LRPNLKKICAYVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDN 120
           LRPNLK                 +GCKFTAEEE++VIELQAQFGNKWAKIATYLPGRTDN
Sbjct: 61  LRPNLK-----------------NGCKFTAEEEKMVIELQAQFGNKWAKIATYLPGRTDN 120

Query: 121 DVKNFWSSRQKRLARLLQTSTAPSKLQRSAKKEKPVDFDVPSMEAPKLSSASEGESSSRP 180
           DVKNFWSSRQKRLARLLQTS APSKLQRSAKKEKP+DFD+PSMEAPKLSSASEGESS RP
Sbjct: 121 DVKNFWSSRQKRLARLLQTSPAPSKLQRSAKKEKPIDFDIPSMEAPKLSSASEGESSLRP 180

Query: 181 MSCSSSCCADNAEAVNMFCSLPDLYSPKLLGFGQDFLQPEFNSFQTIIKSEPQTNYPSTN 240
           MSC SSCCA+N E +NMFCS+PD YSPKLLGFGQDFLQPEFNS    IK E Q     +N
Sbjct: 181 MSCLSSCCAENVEPLNMFCSVPDPYSPKLLGFGQDFLQPEFNS----IKFEQQ-----SN 240

Query: 241 FHTQPLSSTFSSQGLHDPNFDVFLEALDVSQLNNEVQFPFGLQFYEPMGCCSSHDVVREN 300
           FHTQ LSSTFSSQGLHDPNFDVFLE LDVSQL NEVQFP GLQFYEPM CCSSHDVVREN
Sbjct: 241 FHTQSLSSTFSSQGLHDPNFDVFLETLDVSQLTNEVQFPSGLQFYEPMECCSSHDVVREN 300

Query: 301 VDNPESIFSEFPADIFDHIEPLPSSPEN 327
           VDNPES FSEFPADIF+ +EPLPSSPEN
Sbjct: 301 VDNPESFFSEFPADIFE-LEPLPSSPEN 301

[Close]

BLAST of Lsi09G016890 vs. NCBI nr
Match: XP_022933030.1 (transcription factor DUO1-like [Cucurbita moschata])

HSP 1 Score: 523.5 bits (1347), Expect = 1.3e-144
Identity = 269/327 (82.26%), Postives = 279/327 (85.32%), Query Frame = 0


Query: 1   MEERGSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR 60
           MEE GS E LRKGPWKLEEDEVLLNHV RFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR
Sbjct: 1   MEESGSQEALRKGPWKLEEDEVLLNHVKRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR 60

Query: 61  PNLKKICAYVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDV 120
           PNLK                 +GCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDV
Sbjct: 61  PNLK-----------------NGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDV 120

Query: 121 KNFWSSRQKRLARLLQTSTAPSKLQRSAKKEKPVDFDVPSMEAPKLSSASEGESSSRPMS 180
           KNFWSSRQKRLARLLQ ST PSKLQRS +KEKPVDFDVPSMEAPKLSSAS+G++SSRPMS
Sbjct: 121 KNFWSSRQKRLARLLQNSTTPSKLQRSTRKEKPVDFDVPSMEAPKLSSASDGDASSRPMS 180

Query: 181 CSSSCCADNAEAVNMFCSLPDLYSPKLLGFGQDFLQPEFNSFQTIIKSEPQTNYPSTNFH 240
           CSSS  ADNAEAV+MFCSLPDLY PKLLGFGQDFLQPEFN F   IKS+PQ     TNFH
Sbjct: 181 CSSSFSADNAEAVDMFCSLPDLYRPKLLGFGQDFLQPEFNPFPITIKSDPQ-----TNFH 240

Query: 241 TQPLSSTFSSQG-LHDPNFDVFLEALDVSQLNNEVQFPFGLQFYEPMGCCSSHDVVRENV 300
             PL STFSSQG LHDPN DVFLE LDVSQL+NEVQFPFGLQFYEPMG CSSHDVVRENV
Sbjct: 241 PLPLGSTFSSQGLLHDPNIDVFLEPLDVSQLDNEVQFPFGLQFYEPMGRCSSHDVVRENV 300

Query: 301 DNPESIFSEFPADIFDHIEPLPSSPEN 327
           +NPES F+EFPADI D IE L SSPEN
Sbjct: 301 ENPESFFNEFPADILDQIELLSSSPEN 305

[Close]

BLAST of Lsi09G016890 vs. NCBI nr
Match: XP_023520920.1 (transcription factor DUO1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 523.5 bits (1347), Expect = 1.3e-144
Identity = 268/327 (81.96%), Postives = 279/327 (85.32%), Query Frame = 0


Query: 1   MEERGSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR 60
           MEE GS E LRKGPWKLEEDEVLLNHV RFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR
Sbjct: 1   MEESGSQEALRKGPWKLEEDEVLLNHVKRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLR 60

Query: 61  PNLKKICAYVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDV 120
           PNLK                 +GCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDV
Sbjct: 61  PNLK-----------------NGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDV 120

Query: 121 KNFWSSRQKRLARLLQTSTAPSKLQRSAKKEKPVDFDVPSMEAPKLSSASEGESSSRPMS 180
           KNFWSSRQKRLARLLQ ST PSKLQRS +KEKPVDFDVPSMEAPKLS AS+G++SSRPMS
Sbjct: 121 KNFWSSRQKRLARLLQNSTTPSKLQRSTRKEKPVDFDVPSMEAPKLSCASDGDASSRPMS 180

Query: 181 CSSSCCADNAEAVNMFCSLPDLYSPKLLGFGQDFLQPEFNSFQTIIKSEPQTNYPSTNFH 240
           CSSS  ADNAEAV+MFCSLPDLY PKLLGFGQDF+QPEFN F   IKS+PQ     TNFH
Sbjct: 181 CSSSFSADNAEAVDMFCSLPDLYRPKLLGFGQDFVQPEFNPFPITIKSDPQ-----TNFH 240

Query: 241 TQPLSSTFSSQG-LHDPNFDVFLEALDVSQLNNEVQFPFGLQFYEPMGCCSSHDVVRENV 300
             PL STFSSQG LHDPN DVFLE LDVSQL+NEVQFPFGLQFYEPMG CSSHDVVRENV
Sbjct: 241 PLPLGSTFSSQGLLHDPNIDVFLEPLDVSQLDNEVQFPFGLQFYEPMGRCSSHDVVRENV 300

Query: 301 DNPESIFSEFPADIFDHIEPLPSSPEN 327
           +NPES F+EFPADI D IE LPSSPEN
Sbjct: 301 ENPESFFNEFPADILDQIELLPSSPEN 305

[Close]

BLAST of Lsi09G016890 vs. TAIR 10
Match: AT3G60460.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 219.5 bits (558), Expect = 3.8e-57
Identity = 140/327 (42.81%), Postives = 179/327 (54.74%), Query Frame = 0


Query: 8   EVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKKIC 67
           E ++KGPWK EEDEVL+NHV R+GPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLK   
Sbjct: 6   EEIKKGPWKAEEDEVLINHVKRYGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLK--- 65

Query: 68  AYVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSR 127
                         +GCKF+A+EER VIELQ++FGNKWA+IATYLPGRTDNDVKNFWSSR
Sbjct: 66  --------------NGCKFSADEERTVIELQSEFGNKWARIATYLPGRTDNDVKNFWSSR 125

Query: 128 QKRLARLLQTSTAPSKLQRSAKKEKPVDFDVPSMEAPKLSSASEG---ESSSRPMSCSSS 187
           QKRLAR+L  S+  S    + K          +++  + SS   G   E  +   SCS  
Sbjct: 126 QKRLARILHNSSDASSSSFNPKSSSSHRLKGKNVKPIRQSSQGFGLVEEEVTVSSSCSQM 185

Query: 188 CCADNAEAVNMFCSLPDL---YSPKLLGFGQDFLQPEFNSFQTIIKSEPQTNYPSTNFHT 247
               + +  +    LPDL      +   FG D +  E++               S N   
Sbjct: 186 VPYSSDQVGDEVLRLPDLGVKLEHQPFAFGTDLVLAEYSD--------------SQNDAN 245

Query: 248 QPLSSTFSSQG------LHDPNFDVFLEALDVSQLNNEVQFPFGLQFYEPMGCCSSHDVV 307
           Q   S FS +       L DP +   L   D    ++E  F     F+EP         V
Sbjct: 246 QQAISPFSPESRELLARLDDPFYYDILGPAD----SSEPLFALPQPFFEPSPVPRRCRHV 296

Query: 308 RENVDNPESIFSEFPADIFDHIEPLPS 323
            ++ +  +    +FPAD+FD ++P+PS
Sbjct: 306 SKD-EEADVFLDDFPADMFDQVDPIPS 296

[Close]

BLAST of Lsi09G016890 vs. TAIR 10
Match: AT5G55020.1 (myb domain protein 120 )

HSP 1 Score: 129.8 bits (325), Expect = 4.0e-30
Identity = 60/125 (48.00%), Postives = 80/125 (64.00%), Query Frame = 0


Query: 9   VLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKKICA 68
           +L+KGPW   EDE+L  +V   G  +W++++    L R GKSCRLRW N LRPNLKK   
Sbjct: 25  ILKKGPWTAAEDEILAAYVRENGEGNWNAVQKNTGLARCGKSCRLRWANHLRPNLKK--- 84

Query: 69  YVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDVKNFWSSRQ 128
                            FT +EER++I+L AQ GNKWA++A  LPGRTDN++KN+W++R 
Sbjct: 85  ---------------GSFTGDEERLIIQLHAQLGNKWARMAAQLPGRTDNEIKNYWNTRL 131

Query: 129 KRLAR 134
           KRL R
Sbjct: 145 KRLLR 131

[Close]

BLAST of Lsi09G016890 vs. TAIR 10
Match: AT3G11440.1 (myb domain protein 65 )

HSP 1 Score: 128.6 bits (322), Expect = 8.9e-30
Identity = 58/130 (44.62%), Postives = 84/130 (64.62%), Query Frame = 0


Query: 4   RGSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNL 63
           RG   VL+KGPW   ED +L+++V + G  +W++++    L R GKSCRLRW N LRPNL
Sbjct: 35  RGKRSVLKKGPWTSTEDGILIDYVKKHGEGNWNAVQKHTSLARCGKSCRLRWANHLRPNL 94

Query: 64  KKICAYVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDVKNF 123
           KK                    F+ EEE++++E+ A+ GNKWA++A +LPGRTDN++KN+
Sbjct: 95  KK------------------GAFSQEEEQLIVEMHAKMGNKWAQMAEHLPGRTDNEIKNY 146

Query: 124 WSSRQKRLAR 134
           W++R KR  R
Sbjct: 155 WNTRIKRRQR 146

[Close]

BLAST of Lsi09G016890 vs. TAIR 10
Match: AT4G26930.1 (myb domain protein 97 )

HSP 1 Score: 127.5 bits (319), Expect = 2.0e-29
Identity = 71/182 (39.01%), Postives = 99/182 (54.40%), Query Frame = 0


Query: 5   GSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLK 64
           G   VL+KGPW + EDE L  +V  +G  +W+S++ K  L R GKSCRLRW N LRPNL+
Sbjct: 14  GGGVVLKKGPWTVAEDETLAAYVREYGEGNWNSVQKKTWLARCGKSCRLRWANHLRPNLR 73

Query: 65  KICAYVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDVKNFW 124
           K                    FT EEER++I+L +Q GNKWA++A  LPGRTDN++KN+W
Sbjct: 74  K------------------GSFTPEEERLIIQLHSQLGNKWARMAAQLPGRTDNEIKNYW 133

Query: 125 SSRQKRLARLLQTSTAPSKLQRSAKKEKPVDFDVPSMEAPKLSSASEGESSSRPMSCSSS 184
           ++R KR  R       P   Q + +++       P   +  L S +   S + P+    S
Sbjct: 134 NTRLKRFQRQGLPLYPPEYSQNNHQQQM-----YPQQPSSPLPSQTPASSFTFPLLQPPS 172

Query: 185 CC 187
            C
Sbjct: 194 LC 172

[Close]

BLAST of Lsi09G016890 vs. TAIR 10
Match: AT5G06100.1 (myb domain protein 33 )

HSP 1 Score: 127.1 bits (318), Expect = 2.6e-29
Identity = 57/130 (43.85%), Postives = 84/130 (64.62%), Query Frame = 0


Query: 4   RGSHEVLRKGPWKLEEDEVLLNHVNRFGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNL 63
           R     L+KGPW   ED++L+++VN+ G  +W++++    L R GKSCRLRW N LRPNL
Sbjct: 26  RWDGHALKKGPWSSAEDDILIDYVNKHGEGNWNAVQKHTSLFRCGKSCRLRWANHLRPNL 85

Query: 64  KKICAYVFGFFCAPSFPASGCKFTAEEERVVIELQAQFGNKWAKIATYLPGRTDNDVKNF 123
           KK                    F+ EEE++++EL A+ GN+WA++A +LPGRTDN++KN+
Sbjct: 86  KK------------------GAFSQEEEQLIVELHAKMGNRWARMAAHLPGRTDNEIKNY 137

Query: 124 WSSRQKRLAR 134
           W++R KR  R
Sbjct: 146 WNTRIKRRQR 137

The following BLAST results are available for this feature:

BLAST of Lsi09G016890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A178VEK7	5.4e-56	42.81	Transcription factor DUO1 OS=Arabidopsis thaliana OX=3702 GN=DUO1 PE=1 SV=1	[more]
Q0JB89	2.9e-49	61.62	Probable transcription factor MYB58 OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q94FL7	5.6e-29	48.00	Transcription factor MYB120 OS=Arabidopsis thaliana OX=3702 GN=MYB120 PE=2 SV=1	[more]
A2WW87	9.6e-29	46.15	Transcription factor GAMYB OS=Oryza sativa subsp. indica OX=39946 GN=GAM1 PE=2 S...	[more]
Q0JIC2	9.6e-29	46.15	Transcription factor GAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=GAMYB PE=...	[more]

BLAST of Lsi09G016890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T9S7	1.6e-148	83.54	Myb-related protein 308-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CB01	1.6e-148	83.54	myb-related protein 308-like OS=Cucumis melo OX=3656 GN=LOC103498816 PE=4 SV=1	[more]
A0A6J1F3T0	6.4e-145	82.26	transcription factor DUO1-like OS=Cucurbita moschata OX=3662 GN=LOC111439723 PE=...	[more]
A0A6J1I9W2	5.5e-144	81.35	transcription factor DUO1-like OS=Cucurbita maxima OX=3661 GN=LOC111472488 PE=4 ...	[more]
A0A6J1DIB8	1.1e-133	77.88	transcription factor DUO1 OS=Momordica charantia OX=3673 GN=LOC111020746 PE=4 SV...	[more]

BLAST of Lsi09G016890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906713.1	3.5e-169	92.33	transcription factor DUO1-like isoform X1 [Benincasa hispida]	[more]
XP_008459792.1	3.4e-148	83.54	PREDICTED: myb-related protein 308-like [Cucumis melo] >KAA0039783.1 myb-related...	[more]
XP_004140627.1	2.4e-146	83.23	transcription factor DUO1 [Cucumis sativus] >KAE8646779.1 hypothetical protein C...	[more]
XP_022933030.1	1.3e-144	82.26	transcription factor DUO1-like [Cucurbita moschata]	[more]
XP_023520920.1	1.3e-144	81.96	transcription factor DUO1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi09G016890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60460.1	3.8e-57	42.81	myb-like HTH transcriptional regulator family protein	[more]
AT5G55020.1	4.0e-30	48.00	myb domain protein 120	[more]
AT3G11440.1	8.9e-30	44.62	myb domain protein 65	[more]
AT4G26930.1	2.0e-29	39.01	myb domain protein 97	[more]
AT5G06100.1	2.6e-29	43.85	myb domain protein 33	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 82..130 e-value: 1.5E-12 score: 57.7 coord: 11..61 e-value: 4.5E-9 score: 46.1
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 7..59 score: 10.208708
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 85..128 score: 8.153313
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 14..59 e-value: 3.68764E-10 score: 52.5778
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 85..124 e-value: 1.1838E-11 score: 56.815
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 12..57 e-value: 2.5E-10 score: 40.4 coord: 85..124 e-value: 1.8E-11 score: 44.0
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 7..63 score: 18.565983
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 84..132 score: 19.953718
None	No IPR available	GENE3D	1.10.10.60		coord: 12..65 e-value: 3.6E-17 score: 64.0
None	No IPR available	GENE3D	1.10.10.60		coord: 85..156 e-value: 4.2E-18 score: 67.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..178
None	No IPR available	PANTHER	PTHR47996	TRANSCRIPTION FACTOR DUO1	coord: 82..325 coord: 3..67
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G016890.1	Lsi09G016890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044839	cell cycle G2/M phase transition
biological_process	GO:0055047	generative cell mitosis
biological_process	GO:0048235	pollen sperm cell differentiation
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0048555	generative cell nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding