Lsi09G016740 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi09G016740
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionFiber protein fb11
Locationchr09: 25174843 .. 25180652 (+)
RNA-Seq ExpressionLsi09G016740
SyntenyLsi09G016740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGGTCATGGAGAAGCTGAAGATGTTCGTAGTTCAAGAGCCCGTGGTGGCTGCATCTTGTTTAATCGGAGGAATTGGTACTCACTCTTTCCTGTTTAGAAGCCCTAACTATTGTTCAATTTTCCATTTATTTTGATCGATGGCATGAAATCATAGCCTTTGTTTCATTTGTCGCTCAGATCTATCTATTCGGAAGAGCATATTTAAATGTTTGCTTTTTTTATGGGTTTCGATATAGTTTAGGATGCTAAGAAACATTTTGACGATTGAAAGCTCCTTATTTGACTAAATAGATTTTCGGATTTGAATATTTTTCGTTGGATTCAGCCTTACCGGGTAAATATTTTCTTTCGGTGTTTCTAGTGACCATAAATTTGTTAAGATGTTGGGATTTATTGGTTTAAATACTTATTATTGTTCGAGATTGGAGTTTTGGAACTTTGAGCTAGCTATCTATTAAAAAGGAGCTGATAGCCTAAGGCATACCCACATATTCTATGAGCTGTTTTAAGCTTCCATTCAGGCTGTGGCTATGAAGCAATGAACTTAATGCAACGTGTTCCAATATTACCTGGTGGGATTCCAATGGAACCTTGGTTTTGCTTTTGCAGACCTCTCTATTTTGAACCAAGCATGCTAACTAAGCAAGGTTGGAAGTTGATCGAAGGAATATTTTTCTGAGTAAAGGGTCGTAGTAAGGTGACCCTTTCTACACCTAGCAAAGTGTGTTATGGGGGAGAAAACTATCAAAAAGGGGGATTTAGAATGAAATTGGAATGGAATGTAAGGTGACATGGCCTCCTGACCATTGGCTTCTTAGAGCTACTAAAGCAATTATTTCCTTTTGACCTCCTAGCTAATGTTTTGGAAAGCAGGAAGTGCAATAATTCTTTAGGACTTGAGCCAGAGCCACAAAAAAGGTGAGAGCTTTAGCAAGGTAAAACCTACAAGGAGACCGCTCTCCTTGGGGGGCTTGGAATTGAGAATCTTAGGATGCGAAACAAAGCTTTGTTAGCCAAATGGCTGTGGCGTTTTTCCTCTGAGCCCAACTCTTTGTGGCTCAGGATGATAGCTAGTAAACATAGTCCCCATCCTTTCAAGTGGCTGTCTAAGGGGATTGAGGGTACTTATCAGAATATGTGGAAAGATATTTCGAAAGAGCTCCCTTCATTCGTCCTTTTGGTTCATTGTGTGGTGGGGGAGGGGAGGGCAACGTACTTCTTGGAGGATTACTGGGGGAGAGACCACTCTGTGCTTTGTTCCCTCGTCTGTTTCATTTTTCGTCCCTCAAAAATCACTTTGTCGGTGATTTTCTTGTTTGGTCCAAGAGCTCTTGTTTCTTTTCTTTTGGGTTCTGTCGTTCTCTTTCCGATAGGGAGGCGATAGAGGTTGCTGCTCTTCTTTCTTTACTCGAGGGTCACCCCTTAGATTAGGGAGAAGGAATGTTCGTGTTTGGAGCTTCAATCCTTTGGAAGGGTTTTCTTGCAAGTTTTTCTTTCAGTGTTATGGTCGATCCTTCTCCCTTAGGTGTGTCGGTTCTCTGGAGGATTAAGATTTCTAGGAAGGTGAGGTTCTTTACCTGGCAAGTCCTTCACGGTTGTGCTAACACGTTGGATAGGCTTGCGAAGAAGTTGTCTTCGCTTATTGGGTTGTTCTGTTGTATTCTTTGTCAGAGGGTGGAGGAAGACTTGGACCATATTCTCTGGTGCTATAATTTACTGTCTGGGATTTATTCCTTTCAGATGTTTGGTATGTCGTACGTTCATCACAGAGATGCTAGTGATATGATCGACCGCCTTTTGGGGAGAAGGGTCACTTCTTATGGATGGCGGGGGTGTGTGCGTCTTTGTGGGTCTTGTGGGGTAAGCGGAACAATAGGGTGATTAGAGGGTGGAAAGGGATCCTAGGGAGATTTGGTCCCTTTCTCGCTTCCATGTCTCTTTGTGGGCTTCTATTTCAAATACCTTTTGTAGCTATTCTATAGGAACGATCTCTTATAGTTGGAGCCCCTTCTTGTAGAGGGTGTTTCTCCTTTTTGTGGGCTTTTTTTTGGTATGCCCGTGTATTCTTTCATTTTATTCTCAATGAAAGTTGTTATTTTCATATTTTTTTAAAAATAATAATTAAAAAAAAGCGCTACAATATATGTAAAAAAATCCCTTAAGCATTAGACAGAAAAATAAGGATTAACTGCTAAAGATGAACAATGGTTTATGACATGTACAAAGAATCTACAAAATCTTACAAATAAAATTCAAAGTTACATTACGGATACCCTAAGAAGAGACATGTCTTCACTATATTGGTCCTCAGTTCCACTTCTGCCATAACTAGTCTTATGTGATCCTCACCTTTTGACAAGACAAAGGCCACACTTTGGGTGGGATGGATGAACAAAGGAGAGCCACAGGCTTTTTCTTAAACTTCTTTCTCTACCTAATTTAATTATAGTTTATAAAAAGAATGTTGCGTACCACTCAACAGTGTGAGATGCTTCACCTAGCTTTAGCATCAAATGTGCAAGCACATGGTTTTTTTGAGCTTTTTAAAAATGAAAACAATGCTCCTAGTTATAAAGGAAAAACAGTTGCCACATGCCAGCCTGTTAAATAATAGTGATGACTGGATTGACGGTTTGACTTTAAAAAAAAAAAGAAGATATCAACAGGTTAGGGTGGGTTGGTTGAATGTCAACAATTTGATTTTCTCCATAGAACTAAATGTTTAGTGGGGTGGAGAATTTTAGGAGGAGATGTAGTCCTTTGTGAAATTTCATGTCTATCTTTCGGCTTTGGGGTATAAGGATTTTTTTGTAATTTTCCTTTAGGTCTTTGTTTTTGTGTTGTTTTGGCTCATTTTGTGGGGTTGTCTTTTTATACACTTCTTGTATTCTTCCATTTCTTCACAATAACACATGGTTTTACACTTAACCTTTTTTTTTTTTAATGAGAAACATTCAAAATAATTTCATTGATAGGATGAAATTACAAAAAGGCATAAACGCCGTGAGAGTTACATATAACTTTTCCAATGTGTAATAAGGGAAGCAAGATTGGAATCACAAAAAGAAGATGTAAATTTACACCGAGACAGAGAAGTATATAACAGGTGATCAAGAAATTGAGTGAATTCCTGCACTCTATCTTCAAAAATACGATGATTCCTCTCCTTCCAAAGGAGCCAGGTTTTACACTTGAACAAAAAATGATCTTCAACATACTATTTGCTTTGCCTTTCATCTAGGTGCTTCCTTTCCTCATGATCTCTGACGGAGTCCTTGTCTTCTGTGCTCTCGACTTCAATAACTTGCTTTTTCATAACCCCATAACTGCATGAGTATTAAAATTAAATATCCCCTTATCCTAATTTGTTAAGGAATCTGTCTCTGCTTTCTTCAGACTACTCAAACAAAACTTAGCTCTAACATGCCTGATGGAACACATCACACTACCACATCAGAAGCAACCACTTATTCCAGAGTTCTTACAATGTTGTCTCACTTAAAATAAAATATACTTATAAGTTATAAGTTATAATTTATATAGACAAGTCTGTCACAGATTTTCTGTTATCTTTTGACCCAGCAATCTTATATTTTGTTCAATGTTTCAAATTTTCGCCACCAGATCCAACTTCAGCCAATAACCCCTGTGCTCCCCAACACTTAGCGACTTACCAGATTTTGGAGCCACTACCTGCATAAGTATACCAATTAGTCACAAGTTGTCAAATGAAATACAATAGCAAATTTATCAGACCCCAGTGACAAAAAAAGATTACATTAGAACTATAATGCAATATCAAAGAAGAGCAATGAAACAATGAAAAGCCTTTTGAGAGGACTATCTCTTTTCCACAAGACAACTAAATCACAAAGTTTTTCCAAACTTAACTCTCACTATTATTGCTCTGGTAGCTCCTCGGAACTCAAACCTTTCTTCAACATGTCCCTATCTAGTAAGCTTTGTGCTTTCTTGGTTTGCTAGTATAGTTTGGTCATTACCTTCTACCCCCAACAACTCCTTAAGTAATTACAAATATGCCCATGTTAAGTGTCAATATCCCTAATAACATTCTACTATTTCCCTACAGGTGCTCTAACATATGGGAACAAAAATCACCATCCCTGTCATTTAAAGTTGTCTTCATTAGTTAGGTTGATATCATTTAATTCACCATCAACTTCTCCTCCTTATCAGGCTTTTCCAGTCAAAGATCTCTTCTGATTTTTCGCCTTCCCTAATCCCGTTCTATTTATTCTCGAAGCATTTTGATTCACCTAGCATTTTCATTCCCAAAGTGTAAAACATAATCAAATTTTTGTACAAAGAGGAACCACAACTTTTGAAAGTTAAGTATGACATCACCACTTGAACCACAGAGCTTCCAGTATTCGGAATTTCATTTTAATATAGCAAGGATGAAGTTGCATAGGTTTTCTCTAACTTGTATGCAAGCTTGGAAACAATTAATCAAATTGATAGTCATGGATATGCATCTGATGAAACTCAGCAATCTTGACCTTAAGTTTCAAAGGTTTCTTTCTTCTACAAAATAGGTATTTTTGCTTTGTTCATCTTCCTTAAAAAGGTACTGCATTTGGATTTTTTGGGTTTCTTAGCATTTCATATTTCAACTCACCCAGAAAGAACCGAAAACTGAACTAAAAGAAAAGGACTTATTTACTTCCCTACAACTAATAAACTCCCTTTTCACCATCTTGGTGAAGTGAGAGAGAATGGGAGGGTGCACCCCCTTACCTTCATTTGTCATGATGAAGTGACAAGACAGATTGAGTCCAATTTTTACACGGATTGACTACTATATATCTACTTTTTGGCTTAATAGACTACCACATGGAACATATATCTACTTTTTTGGTTTCTAACATGTTATAAACCTTGTAGGTCTTTTCCTTCCAGCCTTTGTAAGGCCAATTCTGGATTCCTATGAAGCATCTAAGCAAGTTCCTCAGCCCGTATTAAGTGATGTAAGTACAGAATCTTGACAAGTATTAGAAATTCATGTTTTTCTGTTGTATGGTTCTGTTTGGATCATTTGGACTAAATGCACACGTGAGTTTCTTTGCTTGTTTCTGTATGTGATGTTCATGTTTCTGGGGTATGTGTAGAATGAACTGTCTGCATGCAATAAGTCTATTCTTTTCGTACTTATTATAATGTTCAACCTCCGGCAAGTGAGATTCCTTGCCTTGCCAAAAACATATGCCATCTAGTATCTAACTGGGGAACAATCAATAAAACTTATCTTAAAAATGAAGTTTTAATGCGAGATTCATTCTCATTGCTACAATTTCTTTTATTGTTTTTTTTTCTTTTTTTTTTTTTGAGAGAGGAACAATTTCATTCTCATTTTTACTTTTGATGCCCTTTAATTGTTTACTTTCTTACAATGTTTATTGTAAATTTATGGATTGTCAATTTTGCAGGTGGTTGCAAGTATGACTGGAAAGAAATAAGGATGATCTGTATCAGTGACAAAAGAAGATTGTTCTTAATCACTGGTTTTTTTTCTTAATCAATTTTCATTTTCATCTGCCTTAAATAAGCATGTACAACGTTTTTGGAAATCAAGCTTCATAGCAATAGTTATTATGTTACATTGCCTTGTTTTATGCCCGTGTATAAGACTGATTTTCATGATATTTCAACTTTAATCAGTCCTTTCGAAGCCCGAGTAAAACTTGCTTCATCATAAATTGCAGTCTATAAACTCGTTTGATTTTTTAAGTTGGGATATAACGATCGACCTATTAACATAGTTTTTAGGATCAATTATCCCAAGCCA

mRNA sequence

ATGCCGCCTTACCGGTTTATAAAAAGAATGTTGCGTACCACTCAACAGTGTGAGATGCTTCACCTAGCTTTAGCATCAAATGTGCAAGCACATGGTCTTTTCCTTCCAGCCTTTGTAAGGCCAATTCTGGATTCCTATGAAGCATCTAAGCAAGTTCCTCAGCCCGTATTAAGTGATGTGGTTGCAAGTATGACTGGAAAGAAATAAGGATGATCTGTATCAGTGACAAAAGAAGATTGTTCTTAATCACTGGTTTTTTTTCTTAATCAATTTTCATTTTCATCTGCCTTAAATAAGCATGTACAACGTTTTTGGAAATCAAGCTTCATAGCAATAGTTATTATGTTACATTGCCTTGTTTTATGCCCGTGTATAAGACTGATTTTCATGATATTTCAACTTTAATCAGTCCTTTCGAAGCCCGAGTAAAACTTGCTTCATCATAAATTGCAGTCTATAAACTCGTTTGATTTTTTAAGTTGGGATATAACGATCGACCTATTAACATAGTTTTTAGGATCAATTATCCCAAGCCA

Coding sequence (CDS)

ATGCCGCCTTACCGGTTTATAAAAAGAATGTTGCGTACCACTCAACAGTGTGAGATGCTTCACCTAGCTTTAGCATCAAATGTGCAAGCACATGGTCTTTTCCTTCCAGCCTTTGTAAGGCCAATTCTGGATTCCTATGAAGCATCTAAGCAAGTTCCTCAGCCCGTATTAAGTGATGTGGTTGCAAGTATGACTGGAAAGAAATAA

Protein sequence

MPPYRFIKRMLRTTQQCEMLHLALASNVQAHGLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
Homology
[Close]
BLAST of Lsi09G016740 vs. ExPASy TrEMBL
Match: E5GCM8 (Fiber protein fb11 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.3e-10
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 32 GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK 69
          GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
Sbjct: 27 GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK 63

[Close]
BLAST of Lsi09G016740 vs. ExPASy TrEMBL
Match: A0A1S3CAX6 (uncharacterized protein LOC103498799 OS=Cucumis melo OX=3656 GN=LOC103498799 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.3e-10
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 32 GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK 69
          GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
Sbjct: 27 GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK 63

[Close]
BLAST of Lsi09G016740 vs. ExPASy TrEMBL
Match: A0A6J1DBQ1 (uncharacterized protein LOC111018851 OS=Momordica charantia OX=3673 GN=LOC111018851 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.1e-09
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 32 GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK 69
          GLFLPAFVRPILDSYEASKQVPQP LSDVVA MTGKK
Sbjct: 27 GLFLPAFVRPILDSYEASKQVPQPALSDVVAGMTGKK 63

[Close]
BLAST of Lsi09G016740 vs. ExPASy TrEMBL
Match: A0A6J1L2U6 (uncharacterized protein LOC111499335 OS=Cucurbita maxima OX=3661 GN=LOC111499335 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.4e-09
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 32 GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK 69
          GLFLPA VRPILDSYEASKQ PQPVLSDVVASMTGKK
Sbjct: 27 GLFLPAVVRPILDSYEASKQAPQPVLSDVVASMTGKK 63

[Close]
BLAST of Lsi09G016740 vs. ExPASy TrEMBL
Match: A0A6J1H9H3 (uncharacterized protein LOC111460833 OS=Cucurbita moschata OX=3662 GN=LOC111460833 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.4e-09
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 32 GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK 69
          GLFLPA VRPILDS+EASKQVPQPVLSDVVASMTGKK
Sbjct: 27 GLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK 63

[Close]
BLAST of Lsi09G016740 vs. NCBI nr
Match: XP_008459762.1 (PREDICTED: uncharacterized protein LOC103498799 [Cucumis melo] >ADN34227.1 fiber protein fb11 [Cucumis melo subsp. melo])

HSP 1 Score: 75.1 bits (183), Expect = 2.6e-10
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 32 GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK 69
          GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
Sbjct: 27 GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK 63

[Close]
BLAST of Lsi09G016740 vs. NCBI nr
Match: XP_038875998.1 (uncharacterized protein LOC120068338 [Benincasa hispida])

HSP 1 Score: 75.1 bits (183), Expect = 2.6e-10
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 32 GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK 69
          GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK
Sbjct: 27 GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK 63

[Close]
BLAST of Lsi09G016740 vs. NCBI nr
Match: XP_022150787.1 (uncharacterized protein LOC111018851 [Momordica charantia])

HSP 1 Score: 72.0 bits (175), Expect = 2.2e-09
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 32 GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK 69
          GLFLPAFVRPILDSYEASKQVPQP LSDVVA MTGKK
Sbjct: 27 GLFLPAFVRPILDSYEASKQVPQPALSDVVAGMTGKK 63

[Close]
BLAST of Lsi09G016740 vs. NCBI nr
Match: XP_022959928.1 (uncharacterized protein LOC111460833 [Cucurbita moschata] >XP_022959929.1 uncharacterized protein LOC111460833 [Cucurbita moschata] >XP_023005103.1 uncharacterized protein LOC111498190 [Cucurbita maxima] >XP_023513591.1 uncharacterized protein LOC111778152 [Cucurbita pepo subsp. pepo] >KAG7025334.1 hypothetical protein SDJN02_11829 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 70.9 bits (172), Expect = 4.9e-09
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 32 GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK 69
          GLFLPA VRPILDS+EASKQVPQPVLSDVVASMTGKK
Sbjct: 27 GLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK 63

[Close]
BLAST of Lsi09G016740 vs. NCBI nr
Match: XP_023006679.1 (uncharacterized protein LOC111499335 [Cucurbita maxima] >XP_023006681.1 uncharacterized protein LOC111499335 [Cucurbita maxima])

HSP 1 Score: 70.9 bits (172), Expect = 4.9e-09
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 32 GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK 69
          GLFLPA VRPILDSYEASKQ PQPVLSDVVASMTGKK
Sbjct: 27 GLFLPAVVRPILDSYEASKQAPQPVLSDVVASMTGKK 63

[Close]
BLAST of Lsi09G016740 vs. TAIR 10
Match: AT2G46540.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 6.9e-09
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 32 GLFLPAFVRPILDSYEASKQVPQPVLSDVVASMTGKK 69
          GLFLPA VRPILDS EASKQV  P L+DV+A +TGKK
Sbjct: 27 GLFLPAVVRPILDSLEASKQVKAPPLTDVIAGVTGKK 63

The following BLAST results are available for this feature:
BLAST of Lsi09G016740 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi09G016740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
E5GCM81.3e-10100.00Fiber protein fb11 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A1S3CAX61.3e-10100.00uncharacterized protein LOC103498799 OS=Cucumis melo OX=3656 GN=LOC103498799 PE=... [more]
A0A6J1DBQ11.1e-0994.59uncharacterized protein LOC111018851 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1L2U62.4e-0994.59uncharacterized protein LOC111499335 OS=Cucurbita maxima OX=3661 GN=LOC111499335... [more]
A0A6J1H9H32.4e-0994.59uncharacterized protein LOC111460833 OS=Cucurbita moschata OX=3662 GN=LOC1114608... [more]
BLAST of Lsi09G016740 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008459762.12.6e-10100.00PREDICTED: uncharacterized protein LOC103498799 [Cucumis melo] >ADN34227.1 fiber... [more]
XP_038875998.12.6e-10100.00uncharacterized protein LOC120068338 [Benincasa hispida][more]
XP_022150787.12.2e-0994.59uncharacterized protein LOC111018851 [Momordica charantia][more]
XP_022959928.14.9e-0994.59uncharacterized protein LOC111460833 [Cucurbita moschata] >XP_022959929.1 unchar... [more]
XP_023006679.14.9e-0994.59uncharacterized protein LOC111499335 [Cucurbita maxima] >XP_023006681.1 uncharac... [more]
BLAST of Lsi09G016740 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G46540.16.9e-0975.68unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36026:SF1OS05G0542100 PROTEINcoord: 26..68
NoneNo IPR availablePANTHERPTHR36026OS05G0542100 PROTEINcoord: 26..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G016740.1Lsi09G016740.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane