Lsi09G016650 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G016650
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
Location	chr09: 25053053 .. 25064969 (+)
RNA-Seq Expression	Lsi09G016650
Synteny	Lsi09G016650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATTTCCACTCCTTCCCCTCCAGTCTCTCTCTCCCTCCGTTTCTCCTTCTTCGGCAGCTTCTTCTTGCCGTGCTGCTTGAAATCATCTCTGGTTTCTCTTTTCCATTCCGTTGTCCCGAAGATCTCTCTCTGCTCTCTGTGCTCTCTAGAAGAGGTATTTACTTCATCTCTCTAGATTTTTCATTCTTATTCACGATTCGAAGTTTGTAAATTGAACCGTTGTCATTATTATGAAACCTTTATGGTTAGTGTTTTTTTTTTCTTCATTTTATAGTTGACTGAACAAATAAGGATTTGTTTTTTGCTTCGGAAAGGTGTATAGGATCTGCGTGATTTTTGTTTCCATTCGGATCCATGATGGGTCTGGTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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TTTGGTTTCAAATAATACACTAGTATGAATATAGTTTTTTAGTTTTATGTTTTGACATTGGTTTCTGCTTGTTCCACATAATGACATTAGTTTCTTCAAAGTTGAGCTCAAACTTGCATTATTTGTTGGTCCATTAGAGAAAATTTCAGTGGCGGATTATTTCTTTTGCAAACTAGAACTAGATTATTGTGTATGCTTGATTTTAGTTTTTGTTTTTGGATAGAATGAACGAGCATCCAATTGTAACACAACAATTGTTATTCCATTTTTCTGTAAGATGATGTTTTTCCTTTCTTCGTTCTCATATCTTTTGCATGGAACTTTAATGAGTAGATAAAGATCACATTCCCTCTTTAACAATTCATAATATTTTTTTTTTTCGAAGTTGATTTTTGTTAAAGGGTAATTTAATACCTTTCACATTTTATTTTTAACTCAATTCCTACCCGTTTAAGCATGTTTTATGACAAAGCTTTGAATGATGCTCTATATATTTAAGCTTATTAATTTGGTCAAGAATAACAATTTTGTATATTAACATGTGTAATTCACACTATGATTCACGTTTGAGTCTTGCTATTTATTTAACCAAGTTTTCTCTGTTAATACTGCTTAAAAAGTTTGTTTTTAAAGAAAAAAATTGTTTGGATATATTAGTTTCTTAATGTTTGTACTTTTGGTAGTAACTAAAACTATTATGCTCTTATAAGTTATGTATAATCCATCAAATGGAATGTTAAACTGTTTTTCATTCACCGTTCTAGTTATTCAGGTTATATTTCGGGTGTATTTTTATTTTGATTCTGTCGTGGCAGTATGTCTTTATAATCTCTGCTCTTTATTTGCAATTTTCAATAATGAAATTGTTCTATAGATTGTGAGCAATGCTTCTTTTCCTAAAGTTGCTAATAGACATTTTCTAGAGGTGAAGTTTTCAATTGAAAAACTATAGGATGATCGAGTTAGTTCAGTTGTGTACCTTAGAGTAGTGGAGAAGTTTACTTACTCTACTGGTGAAGTATGAATGAGATTCCAACACCAATCCAATATTTCTTGTAAGGTGTTTGCTCTCATGGTTGTGGTTGCTGTTATTGACTCACGTATCCTTTGGTGTGATCTTGATATCTGTAATCATTTTTTACAATGCTTATTTCTTTGAATCGTGATTATTCTTAACTGAATGATTTAGAAATCTTAAATTGCTCGTTCAAAATAGGATCAAATTCTGCATGGAGGTATGCAACGATATTGTTATGTATCATGCTTCCTTAGTTCAACTGATCTTCTAACATTCAACTAATCTTATAAATTCATTCGTAAGACCTACAACTGATCTACAGTAAGTGCCAGCTATCATATCCATTGGTCTCCACTTATTTGTTGTTTGATTTGAAGTAATTGGTAATTATCATTTTTGTTTGCTCTTCCAAGTTGGACTATGCTCTGGAGAGTTGGAGGCTTTTCCATAAATTTTGTTTGGCTTGCTATTGGAGGCTTTTTGTTCATTCAATGCAATTTTAGAGGTCCAATCATATGTTTTAATATTCTCCTTTTTACGTTTGCTGATTTCAGGGAGTTGAGGATTACGTCTAATGAAGTGTTGAGTTTGGTGGAGTTACTAAACGTGTTGTGGTGTTTGGAGGAGGATACAATCTCTCTTATGCTATGTGTTCAATGATTAAGATCACAACTTCTTCCTGTTATTAGGTATAATGTGTTTAAATGAGGCTTATTCACTTGTGAGGATAGATAGTTTTAGTAACTTTAAATAAGGCTTATTCACTTTTGATGTTATTAGTGTTGTAATTTTGAAATTTTTTATATAGAGTTGATAGTGTTGTTATTTTGGAATTGTTCATATGAAAGTTTGTTTGGTGATGTTGAAGATATGAAATTGTATTAATTCGATTGGGGAAA

mRNA sequence

CAAAATTTCCACTCCTTCCCCTCCAGTCTCTCTCTCCCTCCGTTTCTCCTTCTTCGGCAGCTTCTTCTTGCCGTGCTGCTTGAAATCATCTCTGGTTTCTCTTTTCCATTCCGTTGTCCCGAAGATCTCTCTCTGCTCTCTGTGCTCTCTAGAAGAGATAACAATAGCTTGCAGAAAGTTTATATCTTGCTAATATGAGGCGGTGTTACCATTGAAATATTTTCTATTTGTCTTGAAGTCTGATTTTATTGTGGAGAAAATGTTTGGCTCATTTGGACCAATCTTGTCTCTTCCAGCTCCTTCAGAGGATTCAAAACCTACTGTTCAGGATGAGCAGGATGAAATTATTAATAACGATGAAGTGGATAAGGACAAAACCAACTCTGCACCTGTATCAGTTGCAACACATACTAAAACTATTGGTATCATACATCCTCCTCCAGACATCAGAAGCATTGTGGATAAAACTGCACAATTTGTTGCGAAAAATGGACCAGAATTTGAGAAGAGGATCATTGCAAATAATGCCGGTAATGTCAAGTTTAATTTCTTGAACTCTTCAGATCCTTACCATGCTTACTATCAGCATAGGTTGTCTGAGTTTCGTGCCCAGAATCAATCATCTGCACAGCAGCCTGAGAAGGCTGCAGATTCTGCAGCACCAGCCTTGTCTGGTCCAGCTGCTGACAACAATGAAACAATGGCAGCAAAGCCTGATGTTTCTGCTTTGTTCAAACCTGTACGCAAAGTTCTCGAGCCTCCAGAGGCTGAGCAGTATACTGTTCGTCTTCCTGAAGGGATTACAGGGGAGGAATTGGATATTATCACGCTCACAGCCCAATTTGTTGCCCGGAATGGGAAATCATTCTTGACAGGATTAACAAGTAGAGAGATTAACAATCCTCAGTTTCATTTTCTGAAACCTACTCATAGCATGTTCATGTTTTTTACCTCCCTTGCGGATGCATATTCCAAAGTGTTGATGCCTCCCAAGGGGCTGACTGAGAAACTGAAGAAGAGTGTTACTGACATGACAACAGTGCTCGAGAGATGTGTGCATCGACTTGAGTGGGAGCGTTCACAAGAGCAGGCAAGGCAAAAAGCTGAAGATGAGATTGAGCAGGAAAGGATACAAATGGCTATGATTGATTGGCATGATTTTGTTGTGGTTGAGGCAATAGACTTTGCAGATGACGAGGATGAAGATTTGCCCCCACCAATGACTCTTGAGGAAGTAATTAGAAGAAGCAAGATTTCTGTTGCTGAAGAAGAGGTTGTTGAACCTGGGAAGGAAATGGAAATGGATATGGATGAAGAAGAGATGCAACTTGTTGAAGAGGGTATGCGGGCTGCTAGGTTAGGAGAAAATGACAATGACAAGAATGATATGAAGGTAGATGAGGAGCCCGAGGCACCAATGAGAATTGTTAAGAATTGGAAGAGACCTGAAGAGAGAGTCCCTGCAGAAAGAGATCAAACAAAATTTGTTGTCTCTCCGATCACAGGTGAACTAATTCCAATCAATGAGATGTCTGAACATATGAGGATTTCACTTATTGATCCGAAGTATAAAGAGCAAAAGGAAAGAATGTTTGCCAAGATACGGGAGACCACACTTGCTCAGGATGATGAGATCTCAAGAAATATAGTTGGATTGGCACGAACTCGTCCTGATATATTTGGTACCACTGAGGAGGAAGTATCAAATGCAGTCAAGGCAGAAATTGAAAAGAAAGAAGATCAACCTAAGCAGGTCATATGGGATGGCCATACTGGAAGCATCGGGCGTACAGCAAATCAAGCTATGTCACAAAATCTTGTTGGAGAGGATCTGAATGATGCTACTAACAATGATGCAAGGAACCTTCCTGGTCCTGCAGCCCTGCCACCGAAACCCGGAGTGCCATCAGTTCGTCCTCTCCCGCCTCCACCTGGACTAGCCTTGAATCTTCCTTCCCTACCTATGAATGCACACTATTCTACCCAAATTAGCGGTGGGCTTACTGTACCCCCACCACAGCCGCCTGTTATCTCAATGATTCCGCCTGTTCAGCCACCACCTCCTGCAATGCATGGACAACAATCATTTTTCATGAATAGACCCCCTTCTATGCCCCCACCAATGTCTATGAATGCACCAAATATGAGTGTCCCACCACCACCGGGATCTCAGTTTACTCACATGCCAGTTCCACGACCTTTTGTTCCTCTCCCTGCCCCTCCACCTATGAATACTATGCTACATCCTCCACCTATGCCACAAGGGGTTCCTCCACCACCTATGCCCCAAGGATCGATGCCTCCCTTACCACCTGAAGAAGCTCCTCCACCACTTCCAGATGAACCAGAGCCAAAGAGACAGAAGCTTGATGATTCTTTGCTTATGCCTGAAGACCAGTTTTTGGCACAACATTCTGGACCTGTCCGTATCACTGTATCTGTTCCTAATCTCGATGATGGAAATCTCAAAGGCCAAGTTCTGGAGATTACTGTCCAGTCCCTCACTGAAACGGTTGGAAGTTTAAAAGAGAAGATTGCTGGTGAGATCCAGCTTCCAGCAAACAAACAGAAATTGAGCGGGAAACCTGGCTTTCTCAAGGACAATATGTCGCTTGCTTATTACAATGTTGGAGCAGGGGAAGCACTCTCCCTCTCTTTAAGGGAACGTGGTGGTAGAAAGAGATGAACAGATTCTTGTTGCATACGAGTTGAGGTTTAAATTTGGACTTTCCTAGTAATGTTCAGACATACTGTTATCTGTTCAAATTGAAGTGTTTTGATCTGGTTTCAACTCCCTCCGGTCCTCCCTACAATGAGACTGAGTTGGTCCGAGGAATTTGAAGAAGTTGTGCTGAGAAGGAGATTGGAGAAGTGGTGAGCTCAAGTAGTTGTACAATGATAAGGATGATCGAGTTAGTTCAGTTGTGTACCTTAGAGTAGTGGAGAAGTTTACTTACTCTACTGGTGAAGTATGAATGAGATTCCAACACCAATCCAATATTTCTTGTAAGGTGTTTGCTCTCATGGTTGTGGTTGCTGTTATTGACTCACAAATCTTAAATTGCTCGTTCAAAATAGGATCAAATTCTGCATGGAGGGAGTTGAGGATTACGTCTAATGAAGTGTTGAGTTTGGTGGAGTTACTAAACGTGTTGTGGTGTTTGGAGGAGGATACAATCTCTCTTATGCTATGTGTTCAATGATTAAGATCACAACTTCTTCCTGTTATTAGGTATAATGTGTTTAAATGAGGCTTATTCACTTGTGAGGATAGATAGTTTTAGTAACTTTAAATAAGGCTTATTCACTTTTGATGTTATTAGTGTTGTAATTTTGAAATTTTTTATATAGAGTTGATAGTGTTGTTATTTTGGAATTGTTCATATGAAAGTTTGTTTGGTGATGTTGAAGATATGAAATTGTATTAATTCGATTGGGGAAA

Coding sequence (CDS)

ATGTTTGGCTCATTTGGACCAATCTTGTCTCTTCCAGCTCCTTCAGAGGATTCAAAACCTACTGTTCAGGATGAGCAGGATGAAATTATTAATAACGATGAAGTGGATAAGGACAAAACCAACTCTGCACCTGTATCAGTTGCAACACATACTAAAACTATTGGTATCATACATCCTCCTCCAGACATCAGAAGCATTGTGGATAAAACTGCACAATTTGTTGCGAAAAATGGACCAGAATTTGAGAAGAGGATCATTGCAAATAATGCCGGTAATGTCAAGTTTAATTTCTTGAACTCTTCAGATCCTTACCATGCTTACTATCAGCATAGGTTGTCTGAGTTTCGTGCCCAGAATCAATCATCTGCACAGCAGCCTGAGAAGGCTGCAGATTCTGCAGCACCAGCCTTGTCTGGTCCAGCTGCTGACAACAATGAAACAATGGCAGCAAAGCCTGATGTTTCTGCTTTGTTCAAACCTGTACGCAAAGTTCTCGAGCCTCCAGAGGCTGAGCAGTATACTGTTCGTCTTCCTGAAGGGATTACAGGGGAGGAATTGGATATTATCACGCTCACAGCCCAATTTGTTGCCCGGAATGGGAAATCATTCTTGACAGGATTAACAAGTAGAGAGATTAACAATCCTCAGTTTCATTTTCTGAAACCTACTCATAGCATGTTCATGTTTTTTACCTCCCTTGCGGATGCATATTCCAAAGTGTTGATGCCTCCCAAGGGGCTGACTGAGAAACTGAAGAAGAGTGTTACTGACATGACAACAGTGCTCGAGAGATGTGTGCATCGACTTGAGTGGGAGCGTTCACAAGAGCAGGCAAGGCAAAAAGCTGAAGATGAGATTGAGCAGGAAAGGATACAAATGGCTATGATTGATTGGCATGATTTTGTTGTGGTTGAGGCAATAGACTTTGCAGATGACGAGGATGAAGATTTGCCCCCACCAATGACTCTTGAGGAAGTAATTAGAAGAAGCAAGATTTCTGTTGCTGAAGAAGAGGTTGTTGAACCTGGGAAGGAAATGGAAATGGATATGGATGAAGAAGAGATGCAACTTGTTGAAGAGGGTATGCGGGCTGCTAGGTTAGGAGAAAATGACAATGACAAGAATGATATGAAGGTAGATGAGGAGCCCGAGGCACCAATGAGAATTGTTAAGAATTGGAAGAGACCTGAAGAGAGAGTCCCTGCAGAAAGAGATCAAACAAAATTTGTTGTCTCTCCGATCACAGGTGAACTAATTCCAATCAATGAGATGTCTGAACATATGAGGATTTCACTTATTGATCCGAAGTATAAAGAGCAAAAGGAAAGAATGTTTGCCAAGATACGGGAGACCACACTTGCTCAGGATGATGAGATCTCAAGAAATATAGTTGGATTGGCACGAACTCGTCCTGATATATTTGGTACCACTGAGGAGGAAGTATCAAATGCAGTCAAGGCAGAAATTGAAAAGAAAGAAGATCAACCTAAGCAGGTCATATGGGATGGCCATACTGGAAGCATCGGGCGTACAGCAAATCAAGCTATGTCACAAAATCTTGTTGGAGAGGATCTGAATGATGCTACTAACAATGATGCAAGGAACCTTCCTGGTCCTGCAGCCCTGCCACCGAAACCCGGAGTGCCATCAGTTCGTCCTCTCCCGCCTCCACCTGGACTAGCCTTGAATCTTCCTTCCCTACCTATGAATGCACACTATTCTACCCAAATTAGCGGTGGGCTTACTGTACCCCCACCACAGCCGCCTGTTATCTCAATGATTCCGCCTGTTCAGCCACCACCTCCTGCAATGCATGGACAACAATCATTTTTCATGAATAGACCCCCTTCTATGCCCCCACCAATGTCTATGAATGCACCAAATATGAGTGTCCCACCACCACCGGGATCTCAGTTTACTCACATGCCAGTTCCACGACCTTTTGTTCCTCTCCCTGCCCCTCCACCTATGAATACTATGCTACATCCTCCACCTATGCCACAAGGGGTTCCTCCACCACCTATGCCCCAAGGATCGATGCCTCCCTTACCACCTGAAGAAGCTCCTCCACCACTTCCAGATGAACCAGAGCCAAAGAGACAGAAGCTTGATGATTCTTTGCTTATGCCTGAAGACCAGTTTTTGGCACAACATTCTGGACCTGTCCGTATCACTGTATCTGTTCCTAATCTCGATGATGGAAATCTCAAAGGCCAAGTTCTGGAGATTACTGTCCAGTCCCTCACTGAAACGGTTGGAAGTTTAAAAGAGAAGATTGCTGGTGAGATCCAGCTTCCAGCAAACAAACAGAAATTGAGCGGGAAACCTGGCTTTCTCAAGGACAATATGTCGCTTGCTTATTACAATGTTGGAGCAGGGGAAGCACTCTCCCTCTCTTTAAGGGAACGTGGTGGTAGAAAGAGATGA

Protein sequence

MFGSFGPILSLPAPSEDSKPTVQDEQDEIINNDEVDKDKTNSAPVSVATHTKTIGIIHPPPDIRSIVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQSSAQQPEKAADSAAPALSGPAADNNETMAAKPDVSALFKPVRKVLEPPEAEQYTVRLPEGITGEELDIITLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSKVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDWHDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEVVEPGKEMEMDMDEEEMQLVEEGMRAARLGENDNDKNDMKVDEEPEAPMRIVKNWKRPEERVPAERDQTKFVVSPITGELIPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTEEEVSNAVKAEIEKKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDLNDATNNDARNLPGPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTQISGGLTVPPPQPPVISMIPPVQPPPPAMHGQQSFFMNRPPSMPPPMSMNAPNMSVPPPPGSQFTHMPVPRPFVPLPAPPPMNTMLHPPPMPQGVPPPPMPQGSMPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQHSGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPGFLKDNMSLAYYNVGAGEALSLSLRERGGRKR

Homology

[Close]

BLAST of Lsi09G016650 vs. ExPASy Swiss-Prot
Match: Q8RXF1 (Probable splicing factor 3A subunit 1 OS=Arabidopsis thaliana OX=3702 GN=At1g14650 PE=1 SV=2)

HSP 1 Score: 949.1 bits (2452), Expect = 3.2e-275
Identity = 552/822 (67.15%), Postives = 629/822 (76.52%), Query Frame = 0


Query: 1   MFGSFGPILSLPAPSEDSK--PTVQDE-QDEIINNDEVDKDKTNS---APVSVATHTKTI 60
           MF S   IL L AP  D K  P    +  D+ +   E+  ++ NS    P +VATHT+TI
Sbjct: 1   MFSSM-QILPLEAPPTDGKLGPLPPSQLTDQEVEERELQAEQNNSNLAPPAAVATHTRTI 60

Query: 61  GIIHPPPDIRSIVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSE 120
           GIIHPPPDIR+IV+KTAQFV+KNG EFEKRII +N  N KFNFL SSDPYHA+YQH+L+E
Sbjct: 61  GIIHPPPDIRTIVEKTAQFVSKNGLEFEKRIIVSNEKNAKFNFLKSSDPYHAFYQHKLTE 120

Query: 121 FRAQNQSSAQQPEKAADSAAPALSGPAADNNETMAAKPDVSALFKPVRKVLEPPEAEQYT 180
           +RAQN+  AQ  + +  +  P L   AAD +E    +PD+ A F+   K LE PE E+YT
Sbjct: 121 YRAQNKDGAQGTDDSDGTTDPQLDTGAADESEAGDTQPDLQAQFRIPSKPLEAPEPEKYT 180

Query: 181 VRLPEGITGEELDIITLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLA 240
           VRLPEGITGEELDII LTAQFVARNGKSFLTGL++RE NNPQFHF+KPTHSMF FFTSL 
Sbjct: 181 VRLPEGITGEELDIIKLTAQFVARNGKSFLTGLSNRENNNPQFHFMKPTHSMFTFFTSLV 240

Query: 241 DAYSKVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMA 300
           DAYS+VLMPPK L EKL+KS  D+TTVLERC+HRLEW+RSQEQ ++K EDE E ER+QMA
Sbjct: 241 DAYSEVLMPPKDLKEKLRKSAADLTTVLERCLHRLEWDRSQEQQKKKEEDEKELERVQMA 300

Query: 301 MIDWHDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEE-EVVEPGKEMEMDMDEE 360
           MIDWHDFVVVE+IDFAD+EDE+LPPPMTL+EVIRRSK S  EE E+VEPGKE+EM+MDEE
Sbjct: 301 MIDWHDFVVVESIDFADEEDEELPPPMTLDEVIRRSKASAMEEDEIVEPGKEVEMEMDEE 360

Query: 361 EMQLVEEGMRAARLGENDNDKNDMKVDEEPEAPMRIVKNWKRPEERVPAERDQTKFVVSP 420
           E++LV EGMRAA L EN   +N   V +E EAPMRIVKNWKRPE+R+P ERD TK V+SP
Sbjct: 361 EVKLVAEGMRAANLEENVKIEN---VHDE-EAPMRIVKNWKRPEDRIPTERDPTKVVISP 420

Query: 421 ITGELIPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDI 480
           ITGELIPINEMSEHMRISLIDPK+KEQK+RMFAKIRETTLAQDDEI++NIVGLAR RPDI
Sbjct: 421 ITGELIPINEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDI 480

Query: 481 FGTTEEEVSNAVKAEIEKKED-QPKQVIWDGHTGSIGRTANQAMSQNLVGEDLNDATNND 540
           FGTTEEEVSNAVKAEIEKK+D QPKQVIWDGHTGSIGRTANQA+SQN  GE+  D    D
Sbjct: 481 FGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQALSQNANGEEQGDGVYGD 540

Query: 541 ARNLPGPAAL-PPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTQISGGLTVPPPQPPVI 600
             + PGPAAL PP+PGVP VRPLPPPP LALNLP  P +A Y            P+P  +
Sbjct: 541 PNSFPGPAALPPPRPGVPIVRPLPPPPNLALNLPRPPPSAQYP---------GAPRPLGV 600

Query: 601 SMIPPV----QPPPPAMHGQQSFFMNRPPSMPPPMSMNAPNMSVPPPPGSQFT-HMPVPR 660
            M+ P+    Q   P   G     MNRPP M        P M VPPPPGSQF  HM +PR
Sbjct: 601 PMMQPMHQQHQLTMPGPPGHPQMMMNRPPQM-------QPGMHVPPPPGSQFAHHMQIPR 660

Query: 661 PFVPLPAPPPMNTMLHPPPMPQGVPPPPMPQGSMPPLPPEEAPPPLPDEPEPKRQKLDDS 720
           P+  L  PP    M+ PPPMP G+ PPP         PPEEAPPPLP+EPE KRQK D+S
Sbjct: 661 PYGQL--PPSAMGMMQPPPMP-GMAPPP---------PPEEAPPPLPEEPEAKRQKFDES 720

Query: 721 LLMPEDQFLAQHSGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLP 780
            L+PEDQFLAQH GP  I VS PN +D    GQ +EITVQSL+E VGSLKEKIAGEIQ+P
Sbjct: 721 ALVPEDQFLAQHPGPATIRVSKPNEND----GQFMEITVQSLSENVGSLKEKIAGEIQIP 780

Query: 781 ANKQKLSGKPGFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 809
           ANKQKLSGK GFLKDNMSLA+YNVGAGE L+LSLRERGGRKR
Sbjct: 781 ANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRKR 785

[Close]

BLAST of Lsi09G016650 vs. ExPASy Swiss-Prot
Match: Q8K4Z5 (Splicing factor 3A subunit 1 OS=Mus musculus OX=10090 GN=Sf3a1 PE=1 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 5.3e-113
Identity = 322/838 (38.42%), Postives = 456/838 (54.42%), Query Frame = 0


Query: 6   GPILSLPAPSEDSKPTVQDEQDEIINNDEVDK-DKTNSAPVSVATHTKTIGIIHPPPDIR 65
           GP+ ++P P     P V  E  + I  +   K D T S PV        +GII+PPP++R
Sbjct: 4   GPVQAVPPP-----PPVATESKQPIEEEASSKEDPTPSKPV--------VGIIYPPPEVR 63

Query: 66  SIVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQSSAQ 125
           +IVDKTA FVA+NGPEFE RI  N   N KFNFLN +DPYHAYY+H++SEF+   +  AQ
Sbjct: 64  NIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFK---EGKAQ 123

Query: 126 QPEKAADSAAPALSGPAADNNETMAAKPDVSALFKPVRKVLEPPEAEQYTVRLPEGITGE 185
           +P  A       +        + +  K     + + +     PPE E   +  P  I+  
Sbjct: 124 EPSAAIPK---VMQQQQQATQQQLPQKVQAQVIQETIVPKEPPPEFE--FIADPPSISAF 183

Query: 186 ELDIITLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSKVLMPP 245
           +LD++ LTAQFVARNG+ FLT L  +E  N QF FL+P HS+F +FT L + Y+K+L+PP
Sbjct: 184 DLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPP 243

Query: 246 KGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDWHDFVVV 305
           KGL  KLKK   +   VL++  +R+EW + QE+ R+K E+E E+ER+  A IDWHDFVVV
Sbjct: 244 KGLFSKLKKEAENPREVLDQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVV 303

Query: 306 EAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEVVEPGK-EMEMDMDEEEMQLVEE--- 365
           E +DF  +E  + PPP T EE+  R  I    E+  E  + EME++ DEE+ +  EE   
Sbjct: 304 ETVDFQPNEQGNFPPPTTPEELGARILIQERYEKFGESEEVEMEVESDEEDQEKAEETPS 363

Query: 366 ----GMRAARLGE-NDNDKNDMKVDEEPEAPMR----------IVKNWKRPE--ERVPAE 425
                 +   + E +D+++   KV   PE PM           IV+    P+  + +P  
Sbjct: 364 QLDQDTQVQDMDEGSDDEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPA 423

Query: 426 RDQTKFVVSPITGELIPINEMSEHMRISLIDPKYKEQKERMFAKIR--ETTLAQDDEISR 485
               +++VSPITGE IP ++M EHMRI L+DP++ EQ++R   + +  +   A   +I  
Sbjct: 424 PAPDEYLVSPITGEKIPASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIES 483

Query: 486 NIVGLARTRPDIFGTTEEEVSNAV-KAEIEKKEDQPKQVIWDGHTGSIGRTANQAMSQNL 545
           ++  LA  R DIFG  E  +   + + EI+K E+   +V WDGH+GS+ RT  QA   N+
Sbjct: 484 SLKQLAERRTDIFGVEETAIGKKIGEEEIQKPEE---KVTWDGHSGSMART-QQAAQANI 543

Query: 546 VGEDLNDATNNDARNLPGPAAL----PPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTQ 605
             ++  +A +     +P         P KP    +   PPPP  A N+PS   +A   T 
Sbjct: 544 TLQEQIEAIHKAKGLVPEDDTKEKIGPSKPN--EIPQQPPPPSSATNIPS---SAPPITS 603

Query: 606 ISGGLTVPPPQPPVISMIPPVQPPPPAMHGQQSFFMNRPPS---MPPPMSMNAPNMSVPP 665
           +     +PPP    +    PV P PP      +  +  PP     P P  ++AP ++V P
Sbjct: 604 VPRPPAMPPPVRTTVVSAVPVMPRPP-----MASVVRLPPGSVIAPMPPIIHAPRINVVP 663

Query: 666 PPGSQFTHMPVPRPFVPLPAPPPMNTMLHPPPMPQGVPPPPMPQGSMPPLPPEEAPPPLP 725
                   MP   P +  P PPPM       P P  V P P P     P+PP   PPP+ 
Sbjct: 664 --------MPPAAPPIMAPRPPPMIVPTAFVPAPP-VAPVPAP----APMPPVHPPPPME 723

Query: 726 DEPEPKRQKLDDSLLMPEDQFLAQHSGPVRITVSVPNLDD---GNLKGQVLEITVQSLTE 785
           DEP  K+ K +DS LMPE++FL ++ GPV I V VPN+ D     L GQ L  T+  LT+
Sbjct: 724 DEPPSKKLKTEDS-LMPEEEFLRRNKGPVSIKVQVPNMQDKTEWKLNGQGLVFTL-PLTD 783

Query: 786 TVGSLKEKIAGEIQLPANKQKLSGKPGFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 809
            V  +K KI     +PA KQKL  +  F+KD+ SLAYYN+ +G  + L+L+ERGGRK+
Sbjct: 784 QVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMASGAVIHLALKERGGRKK 791

[Close]

BLAST of Lsi09G016650 vs. ExPASy Swiss-Prot
Match: A2VDN6 (Splicing factor 3A subunit 1 OS=Bos taurus OX=9913 GN=SF3A1 PE=2 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.6e-112
Identity = 318/839 (37.90%), Postives = 457/839 (54.47%), Query Frame = 0


Query: 6   GPILSLPAPSEDSKPTVQDEQDEIINNDEVDKDKTNSAPVSVATHTKTIGIIHPPPDIRS 65
           GP+ ++P P   +    Q  ++E  + +    D T S PV        +GII+PPP++R+
Sbjct: 4   GPVQAVPPPPPAATEPKQPTEEEASSKE----DSTPSKPV--------VGIIYPPPEVRN 63

Query: 66  IVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQSSAQQ 125
           IVDKTA FVA+NGPEFE RI  N   N KFNFLN +DPYHAYY+H++SEF+   +  AQ+
Sbjct: 64  IVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFK---EGKAQE 123

Query: 126 PEKAADSAAPALSGPAADNNETMAAKPDVSALFKPVRKVLEPPEAEQYTVRLPEGITGEE 185
           P  A       +      + + +  K     + + +     PPE E   +  P  I+  +
Sbjct: 124 PSAAIPK---VMQQQQQASQQQLPQKVQAQVIQETIVPKEPPPEFE--FIADPPSISAFD 183

Query: 186 LDIITLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSKVLMPPK 245
           LD++ LTAQFVARNG+ FLT L  +E  N QF FL+P HS+F +FT L + Y+K+L+PPK
Sbjct: 184 LDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPK 243

Query: 246 GLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDWHDFVVVE 305
           GL  KLKK   +   VL++  +R+EW + QE+ R+K E+E E+ER+  A IDWHDFVVVE
Sbjct: 244 GLFTKLKKEAENPREVLDQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVE 303

Query: 306 AIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEVVEPGK-EMEMDMDEEEMQLVEEGMRA 365
            +DF  +E  + PPP T EE+  R  I    E+  E  + EME++ DEE+ +  +     
Sbjct: 304 TVDFQPNEQGNFPPPTTPEELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKAEEPP 363

Query: 366 ARLGE----------NDNDKNDMKVDEEPEAPMR----------IVKNWKRPE--ERVPA 425
           ++L +          +D+++   KV   PE PM           IV+    P+  + +P 
Sbjct: 364 SQLDQDTQVQDMDEGSDDEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPP 423

Query: 426 ERDQTKFVVSPITGELIPINEMSEHMRISLIDPKYKEQKERMFAKIR--ETTLAQDDEIS 485
                +++VSPITGE IP ++M EHMRI L+DP++ EQ++R   + +  +   A   +I 
Sbjct: 424 APAPDEYLVSPITGEKIPASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIE 483

Query: 486 RNIVGLARTRPDIFGTTEEEVSNAV-KAEIEKKEDQPKQVIWDGHTGSIGRTANQAMSQN 545
            ++  LA  R DIFG  E  +   + + EI+K E+   +V WDGH+GS+ RT  QA   N
Sbjct: 484 SSLKQLAERRTDIFGVEETAIGKKIGEEEIQKPEE---KVTWDGHSGSMART-QQAAQAN 543

Query: 546 LVGEDLNDATNNDARNLPGPAAL----PPKPGVPSVRPLPPPPGLALNLPSLPMNAHYST 605
           +  ++  +A +     +P         P KP    +   PPPP  A N+PS   +A   T
Sbjct: 544 ITLQEQIEAIHKAKGLVPEDDTKEKIGPSKPN--EIPQQPPPPSSATNIPS---SAPPIT 603

Query: 606 QISGGLTVPPPQPPVISMIPPVQPPPPAMHGQQSFFMNRPPS---MPPPMSMNAPNMSVP 665
            +     +PPP    +    PV P PP      +  +  PP     P P  ++AP ++V 
Sbjct: 604 SVPRPPAMPPPVRTTVVSAVPVMPRPP-----MASVVRLPPGSVIAPMPPIIHAPRINVV 663

Query: 666 PPPGSQFTHMPVPRPFVPLPAPPPMNTMLHPPPMPQGVPPPPMPQGSMPPLPPEEAPPPL 725
           P        MP   P +  P PPPM       P P  V P P P     P+PP   PPP+
Sbjct: 664 P--------MPPSAPPIMAPRPPPMIVPTAFVPAPP-VAPVPAP----APMPPVHPPPPM 723

Query: 726 PDEPEPKRQKLDDSLLMPEDQFLAQHSGPVRITVSVPNLDD---GNLKGQVLEITVQSLT 785
            DEP  K+ K +DS LMPE++FL ++ GPV I V VPN+ D     L GQVL  T+  LT
Sbjct: 724 EDEPASKKLKTEDS-LMPEEEFLRRNKGPVSIKVQVPNMQDKTEWKLNGQVLVFTL-PLT 783

Query: 786 ETVGSLKEKIAGEIQLPANKQKLSGKPGFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 809
           + V  +K KI     +PA KQKL  +  F+KD+ SLAYYN+  G  + L+L+ERGGRK+
Sbjct: 784 DQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAVIHLALKERGGRKK 793

[Close]

BLAST of Lsi09G016650 vs. ExPASy Swiss-Prot
Match: Q15459 (Splicing factor 3A subunit 1 OS=Homo sapiens OX=9606 GN=SF3A1 PE=1 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.6e-112
Identity = 319/843 (37.84%), Postives = 458/843 (54.33%), Query Frame = 0


Query: 6   GPILSL----PAPSEDSKPTVQDEQDEIINNDEVDKDKTNSAPVSVATHTKTIGIIHPPP 65
           GP+ ++    P P+E  +PT ++   +        +D   S PV        +GII+PPP
Sbjct: 4   GPVQAVPPPPPVPTEPKQPTEEEASSK--------EDSAPSKPV--------VGIIYPPP 63

Query: 66  DIRSIVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQS 125
           ++R+IVDKTA FVA+NGPEFE RI  N   N KFNFLN +DPYHAYY+H++SEF+   + 
Sbjct: 64  EVRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFK---EG 123

Query: 126 SAQQPEKAADSAAPALSGPAADNNETMAAKPDVSALFKPVRKVLEPPEAEQYTVRLPEGI 185
            AQ+P  A       +        + +  K     + + +     PPE E   +  P  I
Sbjct: 124 KAQEPSAAIPK---VMQQQQQTTQQQLPQKVQAQVIQETIVPKEPPPEFE--FIADPPSI 183

Query: 186 TGEELDIITLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSKVL 245
           +  +LD++ LTAQFVARNG+ FLT L  +E  N QF FL+P HS+F +FT L + Y+K+L
Sbjct: 184 SAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKIL 243

Query: 246 MPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDWHDF 305
           +PPKGL  KLKK   +   VL++  +R+EW + QE+ R+K E+E E+ER+  A IDWHDF
Sbjct: 244 IPPKGLFSKLKKEAENPREVLDQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDF 303

Query: 306 VVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEVVEPGK-EMEMDMDEEEMQLVEE 365
           VVVE +DF  +E  + PPP T EE+  R  I    E+  E  + EME++ DEE+ +  + 
Sbjct: 304 VVVETVDFQPNEQGNFPPPTTPEELGARILIQERYEKFGESEEVEMEVESDEEDDKQEKA 363

Query: 366 GMRAARLGE----------NDNDKNDMKVDEEPEAPMR----------IVKNWKRPE--E 425
               ++L +          +D+++   KV   PE PM           IV+    P+  +
Sbjct: 364 EEPPSQLDQDTQVQDMDEGSDDEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASK 423

Query: 426 RVPAERDQTKFVVSPITGELIPINEMSEHMRISLIDPKYKEQKERMFAKIR--ETTLAQD 485
            +P      +++VSPITGE IP ++M EHMRI L+DP++ EQ++R   + +  +   A  
Sbjct: 424 PLPPAPAPDEYLVSPITGEKIPASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPG 483

Query: 486 DEISRNIVGLARTRPDIFGTTEEEVSNAV-KAEIEKKEDQPKQVIWDGHTGSIGRTANQA 545
            +I  ++  LA  R DIFG  E  +   + + EI+K E+   +V WDGH+GS+ RT  QA
Sbjct: 484 LDIESSLKQLAERRTDIFGVEETAIGKKIGEEEIQKPEE---KVTWDGHSGSMART-QQA 543

Query: 546 MSQNLVGEDLNDATNNDARNLPGPAAL----PPKPGVPSVRPLPPPPGLALNLPSLPMNA 605
              N+  ++  +A +     +P         P KP    +   PPPP  A N+PS   +A
Sbjct: 544 AQANITLQEQIEAIHKAKGLVPEDDTKEKIGPSKPN--EIPQQPPPPSSATNIPS---SA 603

Query: 606 HYSTQISGGLTVPPPQPPVISMIPPVQPPPPAMHGQQSFFMNRPPS---MPPPMSMNAPN 665
              T +    T+PPP    +    PV P PP      +  +  PP     P P  ++AP 
Sbjct: 604 PPITSVPRPPTMPPPVRTTVVSAVPVMPRPP-----MASVVRLPPGSVIAPMPPIIHAPR 663

Query: 666 MSVPPPPGSQFTHMPVPRPFVPLPAPPPMNTMLHPPPMPQGVPPPPMPQGSMPPLPPEEA 725
           ++V P        MP   P +  P PPPM       P P  V P P P     P+PP   
Sbjct: 664 INVVP--------MPPSAPPIMAPRPPPMIVPTAFVPAPP-VAPVPAP----APMPPVHP 723

Query: 726 PPPLPDEPEPKRQKLDDSLLMPEDQFLAQHSGPVRITVSVPNLDD---GNLKGQVLEITV 785
           PPP+ DEP  K+ K +DS LMPE++FL ++ GPV I V VPN+ D     L GQVL  T+
Sbjct: 724 PPPMEDEPTSKKLKTEDS-LMPEEEFLRRNKGPVSIKVQVPNMQDKTEWKLNGQVLVFTL 783

Query: 786 QSLTETVGSLKEKIAGEIQLPANKQKLSGKPGFLKDNMSLAYYNVGAGEALSLSLRERGG 809
             LT+ V  +K KI     +PA KQKL  +  F+KD+ SLAYYN+  G  + L+L+ERGG
Sbjct: 784 -PLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAVIHLALKERGG 793

[Close]

BLAST of Lsi09G016650 vs. ExPASy Swiss-Prot
Match: Q86A14 (Probable splicing factor 3A subunit 1 OS=Dictyostelium discoideum OX=44689 GN=sf3a1 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.6e-67
Identity = 240/821 (29.23%), Postives = 391/821 (47.62%), Query Frame = 0


Query: 62  DIRSIVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQS 121
           ++++I+DKTA + AK G  FE ++      N KFNF+   D Y+ YY++++ E +A+ Q+
Sbjct: 12  ELKTIIDKTAAYAAKLGESFENKVKQREGHNAKFNFMKEGDQYYPYYRNKIVENKAKIQA 71

Query: 122 SAQQPEKAADSAAPA---------------------LSGPAADNNETMAAKPDVSA---- 181
            A     AA+   P+                      + P    + T+   P  ++    
Sbjct: 72  DAAAAAAAANPKTPSTTTTTTTTTTATTPLPTATATTTSPTPTTSSTIVPVPQTNSTQQL 131

Query: 182 ------------LFK--------PVRKVLEPPEAEQYTVRLPEGITGEELDIITLTAQFV 241
                       +F+        P +K    P+   Y + +P+ +T  ELD I LTAQF+
Sbjct: 132 QQQQQQQQQTTPVFEKPQPPPPPPPKKEPTQPDPLLYILDVPDFMTPLELDTIRLTAQFI 191

Query: 242 ARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYSKVLMPPKGLTEKLKKS-V 301
           A+NG SF   L SRE+ N QF FLKPT+ ++ +F +L ++Y++++ PP+G+ E+LK +  
Sbjct: 192 AKNGDSFFMELASREVKNSQFDFLKPTNHLYEWFRALVESYAQIIYPPQGIKEQLKSNYF 251

Query: 302 TDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDWHDFVVVEAIDFADDEDE 361
           ++  T+LER ++R E+ + +E   QK E+  ++E+  +A IDWHDFV+V+ I+F +D+ +
Sbjct: 252 SNKQTILERAMNRCEYNQLKEIEEQKKEEREDEEKTIIASIDWHDFVIVDTIEFNEDDLD 311

Query: 362 DLPPPMTLEEVIRRSKISVAEE-------------EVVEPGKEMEMDMDEEEMQLVEEGM 421
           DLP P T +++I         +             + +E   +MEM+MD+E+    E+ +
Sbjct: 312 DLPQPRTFDQLIAGDTPFGGSDFDNDGHGSNGKGGQDMEMEMDMEMEMDDEDNNNNEDEI 371

Query: 422 RAARLGENDNDKNDMKVDEEPEAPMRIVKNWKRPEERVPAERDQTKFVVSPITGELIPIN 481
             + L   +   N   +  + ++ ++IVK++++    V +        +     + IP++
Sbjct: 372 EESSLSSTNTTGN---LPPKDQSKLKIVKDYQKSNSSVKSNAPTKLTQLCQFCKQEIPLD 431

Query: 482 EMSEHMRISLIDPKYKEQKERMFAKIRE-----TTLAQDDEISRNIVGLARTRPDIFGTT 541
           EM EHMRI LI  + ++ +               TL QDD+I+RN+   A  R DIFG T
Sbjct: 432 EMQEHMRIELIQKQQRDSRLGGGGSSNNNNNLTNTLTQDDDIARNLQSFASKRVDIFGET 491

Query: 542 EEEVSNAVKAEIEKKEDQPKQ---VIWDGHTGSIGRTANQAMSQNLVGEDLNDATNNDAR 601
           E           +K+++QP Q   VIWDGH+GSI R      +  L  +    A    A 
Sbjct: 492 ESS---------KKQDEQPTQAPKVIWDGHSGSIPRVQAAQQAAQLAAQ---QAAQQKAA 551

Query: 602 NLPGPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTQISGGLTVPPPQPPVISMI 661
            +    A   +      + L PP          P+  H+  Q      +PP   P   M+
Sbjct: 552 AIAAQQASQQQASQQQQQQLQPPQ---------PIGIHHHPQ----RHLPPGMMPP-GMM 611

Query: 662 PPVQPPPPAMHGQQSFFMNRPPSM--PPPMSMNAPNMSVPPPPGSQFTHMPVPRPFVPLP 721
           PP   PP  M          PP M  PPP  M  P M  PPPPG                
Sbjct: 612 PPGMMPPGMM----------PPGMVPPPPFGMIPPGMVPPPPPG---------------- 671

Query: 722 APPPMNTMLHPPPMPQGVPPPPMPQGSMPP---LPPEEAPPPLPDEPEPKRQKLDDSLLM 781
                   L  P  P G+  PP  Q  +PP     P  +     +EP+ K+ K+DD +L+
Sbjct: 672 --------LMIPTAPPGLMIPPTQQQQLPPQTNTSPSSSSSIKVEEPQSKKLKIDD-VLI 731

Query: 782 PEDQFLAQHSGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANK 809
           PE  +L  +  PV +TV + +      K  + +IT+Q  T+++  LKEKI     +P NK
Sbjct: 732 PESVWLQNNPNPVNLTVEMAD------KSNIYQITLQP-TDSISLLKEKIKELNGMPTNK 760

[Close]

BLAST of Lsi09G016650 vs. ExPASy TrEMBL
Match: A0A5D3C426 (Putative splicing factor 3A subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001770 PE=4 SV=1)

HSP 1 Score: 1458.0 bits (3773), Expect = 0.0e+00
Identity = 772/811 (95.19%), Postives = 783/811 (96.55%), Query Frame = 0


Query: 1   MFGSFGPILSLPAPSEDSKPTVQDEQDEIINNDEVDKDKTNSAPVSVATHTKTIGIIHPP 60
           M GSFGPIL+LPAPSEDSKPTVQDEQDEIINN+EVDKD TNSAP SVATHTKTIGIIHPP
Sbjct: 1   MLGSFGPILTLPAPSEDSKPTVQDEQDEIINNNEVDKDNTNSAPTSVATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKT+QFVAKNGPEFEKRIIANNAGNVKFNFLN SDPYH YYQHRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHGYYQHRLSEFRAQNQ 120

Query: 121 SSAQQPEKAADSAAPAL--SGPAADNNETMAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
           SSAQQP +  DS AP    SGPA+DNNET+AAKPDVSALFKPVRKVLEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQ--DSVAPVSTPSGPASDNNETIAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIITLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDII LTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEVVEPGKEMEMDMDEEEMQLV 360
           HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEE+VEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360

Query: 361 EEGMRAARLGENDNDKNDMKVDEEPEAPMRIVKNWKRPEERVPAERDQTKFVVSPITGEL 420
           EEGMRAARLGENDNDKNDMKVDEEPE PMRIVKNWKRPEERVPAERD TKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLAR RPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDLNDATNNDARNLP 540
           EEVSNAVKAEIE KKEDQPKQVIWDGHTGSIGRTANQAMSQNL  ED NDATNNDARNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNL--EDQNDATNNDARNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTQISGGLTVPPPQPPVISMIPPV 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYST ISGGL +PPPQPPVISMIP V
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTPISGGLPIPPPQPPVISMIPSV 600

Query: 601 QPPPPAMHGQQSFFMNRPPSMPPPMSMNAPNMSVPPPPGSQFTHMPVPRPFVPLPAPPPM 660
           QPPPPAM GQQSFFMNRPPS+PPPMSMNAPNMSVPPPPGSQFTHM VPRPFVPLPAPPPM
Sbjct: 601 QPPPPAMPGQQSFFMNRPPSIPPPMSMNAPNMSVPPPPGSQFTHMQVPRPFVPLPAPPPM 660

Query: 661 NTMLHPPPMPQGVPPPPMPQGSMPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ 720
           NTM+ PPPMPQGVPPPPMPQGSMPPLPP+EAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ
Sbjct: 661 NTMIPPPPMPQGVPPPPMPQGSMPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ 720

Query: 721 HSGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG 780
           H GPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG
Sbjct: 721 HPGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG 780

Query: 781 FLKDNMSLAYYNVGAGEALSLSLRERGGRKR 809
           FLKDNMSLAYYNVGAGEALSLSLRERGGRKR
Sbjct: 781 FLKDNMSLAYYNVGAGEALSLSLRERGGRKR 807

[Close]

BLAST of Lsi09G016650 vs. ExPASy TrEMBL
Match: A0A1S3B308 (probable splicing factor 3A subunit 1 OS=Cucumis melo OX=3656 GN=LOC103485445 PE=4 SV=1)

HSP 1 Score: 1458.0 bits (3773), Expect = 0.0e+00
Identity = 772/811 (95.19%), Postives = 783/811 (96.55%), Query Frame = 0


Query: 1   MFGSFGPILSLPAPSEDSKPTVQDEQDEIINNDEVDKDKTNSAPVSVATHTKTIGIIHPP 60
           M GSFGPIL+LPAPSEDSKPTVQDEQDEIINN+EVDKD TNSAP SVATHTKTIGIIHPP
Sbjct: 1   MLGSFGPILTLPAPSEDSKPTVQDEQDEIINNNEVDKDNTNSAPTSVATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKT+QFVAKNGPEFEKRIIANNAGNVKFNFLN SDPYH YYQHRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHGYYQHRLSEFRAQNQ 120

Query: 121 SSAQQPEKAADSAAPAL--SGPAADNNETMAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
           SSAQQP +  DS AP    SGPA+DNNET+AAKPDVSALFKPVRKVLEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQ--DSVAPVSTPSGPASDNNETIAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIITLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDII LTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEVVEPGKEMEMDMDEEEMQLV 360
           HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEE+VEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360

Query: 361 EEGMRAARLGENDNDKNDMKVDEEPEAPMRIVKNWKRPEERVPAERDQTKFVVSPITGEL 420
           EEGMRAARLGENDNDKNDMKVDEEPE PMRIVKNWKRPEERVPAERD TKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLAR RPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDLNDATNNDARNLP 540
           EEVSNAVKAEIE KKEDQPKQVIWDGHTGSIGRTANQAMSQNL  ED NDATNNDARNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNL--EDQNDATNNDARNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTQISGGLTVPPPQPPVISMIPPV 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYST ISGGL +PPPQPPVISMIP V
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTPISGGLPIPPPQPPVISMIPSV 600

Query: 601 QPPPPAMHGQQSFFMNRPPSMPPPMSMNAPNMSVPPPPGSQFTHMPVPRPFVPLPAPPPM 660
           QPPPPAM GQQSFFMNRPPS+PPPMSMNAPNMSVPPPPGSQFTHM VPRPFVPLPAPPPM
Sbjct: 601 QPPPPAMPGQQSFFMNRPPSIPPPMSMNAPNMSVPPPPGSQFTHMQVPRPFVPLPAPPPM 660

Query: 661 NTMLHPPPMPQGVPPPPMPQGSMPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ 720
           NTM+ PPPMPQGVPPPPMPQGSMPPLPP+EAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ
Sbjct: 661 NTMIPPPPMPQGVPPPPMPQGSMPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ 720

Query: 721 HSGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG 780
           H GPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG
Sbjct: 721 HPGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG 780

Query: 781 FLKDNMSLAYYNVGAGEALSLSLRERGGRKR 809
           FLKDNMSLAYYNVGAGEALSLSLRERGGRKR
Sbjct: 781 FLKDNMSLAYYNVGAGEALSLSLRERGGRKR 807

[Close]

BLAST of Lsi09G016650 vs. ExPASy TrEMBL
Match: A0A0A0LMI9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404860 PE=4 SV=1)

HSP 1 Score: 1456.0 bits (3768), Expect = 0.0e+00
Identity = 770/811 (94.94%), Postives = 780/811 (96.18%), Query Frame = 0


Query: 1   MFGSFGPILSLPAPSEDSKPTVQDEQDEIINNDEVDKDKTNSAPVSVATHTKTIGIIHPP 60
           M GSFGPIL+LPAPSEDSKPTVQD QDEIINN+EVDKD TNSAP SVATHTKTIGIIHPP
Sbjct: 1   MLGSFGPILTLPAPSEDSKPTVQDVQDEIINNNEVDKDNTNSAPTSVATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKT+QFVAKNGPEFEKRIIANNAGNVKFNFLN SDPYH YYQHRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHGYYQHRLSEFRAQNQ 120

Query: 121 SSAQQPEKAADSAAPAL--SGPAADNNETMAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
           SSAQQP + ADS APA   SGP ADNNET+AAKPDVSALFKPVRKVLEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQGADSVAPASAPSGPTADNNETIAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIITLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDII LTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLTEKLKK+VTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKNVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEVVEPGKEMEMDMDEEEMQLV 360
           HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEE+VEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360

Query: 361 EEGMRAARLGENDNDKNDMKVDEEPEAPMRIVKNWKRPEERVPAERDQTKFVVSPITGEL 420
           EEGMRAARLGENDNDKNDMKVDEEPE PMRIVKNWKRPEERVPAERD TKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLAR RPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDLNDATNNDARNLP 540
           EEVSNAVKAEIE KKEDQPKQVIWDGHTGSIGRTANQAMSQNL  ED NDATNNDARNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNL--EDQNDATNNDARNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTQISGGLTVPPPQPPVISMIPPV 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYST ISGGL +PPPQPPVISMIP V
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTPISGGLPIPPPQPPVISMIPSV 600

Query: 601 QPPPPAMHGQQSFFMNRPPSMPPPMSMNAPNMSVPPPPGSQFTHMPVPRPFVPLPAPPPM 660
           QPPPPAM GQQSFFMNRPPSMPP MSMNAPNMSVPPPPGSQFTHM VPRPFVPLPAPPPM
Sbjct: 601 QPPPPAMPGQQSFFMNRPPSMPPQMSMNAPNMSVPPPPGSQFTHMQVPRPFVPLPAPPPM 660

Query: 661 NTMLHPPPMPQGVPPPPMPQGSMPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ 720
           NTM+ PPPMPQGVPPPPMPQG MPPLPP+EAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ
Sbjct: 661 NTMIPPPPMPQGVPPPPMPQGLMPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ 720

Query: 721 HSGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG 780
           H GPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG
Sbjct: 721 HPGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG 780

Query: 781 FLKDNMSLAYYNVGAGEALSLSLRERGGRKR 809
           FLKDNMSLAYYNVGAGE LSLSLRERGGRKR
Sbjct: 781 FLKDNMSLAYYNVGAGEGLSLSLRERGGRKR 809

[Close]

BLAST of Lsi09G016650 vs. ExPASy TrEMBL
Match: A0A6J1C7R8 (probable splicing factor 3A subunit 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009168 PE=4 SV=1)

HSP 1 Score: 1449.5 bits (3751), Expect = 0.0e+00
Identity = 765/811 (94.33%), Postives = 781/811 (96.30%), Query Frame = 0


Query: 1   MFGSFGPILSLPAPSEDSKPTVQDEQDEIINNDEVDKDKTNSAPVSVATHTKTIGIIHPP 60
           M GSFGPIL+LPAPSEDSK TVQDE+DEIINN++ DKDKTNSAP SVATHTKTIGIIHPP
Sbjct: 1   MLGSFGPILTLPAPSEDSKLTVQDEKDEIINNNDGDKDKTNSAPASVATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKTAQFVAKNGP+FEKRIIANNAGNVKFNFLNSSDPYHAYY HRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTAQFVAKNGPDFEKRIIANNAGNVKFNFLNSSDPYHAYYHHRLSEFRAQNQ 120

Query: 121 SSAQQPEKAADSAAPAL--SGPAADNNETMAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
           SSAQQP +AADSAAPAL  SGPAAD+NET+AAKPDVSALFKPVRKVLEPPEAEQYTVRLP
Sbjct: 121 SSAQQPLQAADSAAPALAPSGPAADSNETLAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIITLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDII LTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLT KLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTLKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEVVEPGKEMEMDMDEEEMQLV 360
           HDFVVVE IDFADDEDEDLPPPMTLEEVIRRSKISVAEEE+VEPGKEMEM+MDEEEMQLV
Sbjct: 301 HDFVVVEGIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMEMDEEEMQLV 360

Query: 361 EEGMRAARLGENDNDKNDMKVDEEPEAPMRIVKNWKRPEERVPAERDQTKFVVSPITGEL 420
           EEGMR ARLGENDNDKNDMKVDEEPE PMRIVKNWKRPEERVPAERD TKFVVSPITGEL
Sbjct: 361 EEGMRTARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDLNDATNNDARNLP 540
           EEVSNAVKAEIE KKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGED ND TNND RNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDQNDGTNNDIRNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTQISGGLTVPPPQPPVISMIPPV 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPSLP NAHYSTQISGGL VP PQPPVISMIP V
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPQPQPPVISMIPSV 600

Query: 601 QPPPPAMHGQQSFFMNRPPSMPPPMSMNAPNMSVPPPPGSQFTHMPVPRPFVPLPAPPPM 660
           QPPPPAM GQQ +FMNRPPSMPPPMSMNAPNM VPPPPGSQFT MPVPRPFVPLPAPPPM
Sbjct: 601 QPPPPAMPGQQPYFMNRPPSMPPPMSMNAPNMGVPPPPGSQFTPMPVPRPFVPLPAPPPM 660

Query: 661 NTMLHPPPMPQGVPPPPMPQGSMPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ 720
           NTM+ PPPMPQG+PPPPMPQGS+PPLPPEEAPPPLPDEPEPKRQKLDDSLLMPE+QFLAQ
Sbjct: 661 NTMMLPPPMPQGIPPPPMPQGSLPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEEQFLAQ 720

Query: 721 HSGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG 780
           H GP+RITVSVPNLDDGNLKGQVL ITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG
Sbjct: 721 HPGPIRITVSVPNLDDGNLKGQVLGITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG 780

Query: 781 FLKDNMSLAYYNVGAGEALSLSLRERGGRKR 809
           FLKDNMSLAYYNVGAGE LSLSLRERGGRKR
Sbjct: 781 FLKDNMSLAYYNVGAGEPLSLSLRERGGRKR 811

[Close]

BLAST of Lsi09G016650 vs. ExPASy TrEMBL
Match: A0A6J1I9P7 (probable splicing factor 3A subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111472374 PE=4 SV=1)

HSP 1 Score: 1445.6 bits (3741), Expect = 0.0e+00
Identity = 762/811 (93.96%), Postives = 784/811 (96.67%), Query Frame = 0


Query: 1   MFGSFGPILSLPAPSEDSKPTVQDEQDEIINNDEVDKDKTNSAPVSVATHTKTIGIIHPP 60
           M GSFGPIL+LPAPSEDSKPTVQDEQDEIIN+ EVDKDKTNSAPVS+ATHTKTIGIIHPP
Sbjct: 1   MLGSFGPILTLPAPSEDSKPTVQDEQDEIINDHEVDKDKTNSAPVSIATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKT+QFVAKNGPEFEKRIIANNAGNVKFNFL+ SDPYHAYYQHRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLSPSDPYHAYYQHRLSEFRAQNQ 120

Query: 121 SSAQQPEKAADSAAPAL--SGPAADNNETMAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
           SSAQQP +AADSA PA   SGPAA++NETMAAKPDVSALFKPVRKVLEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQAADSAVPASAPSGPAAESNETMAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIITLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDII LTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEVVEPGKEMEMDMDEEEMQLV 360
           HDFVVVEAIDFADDEDEDLPPPMTLEEV+RRSKISVAEEE+VEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVVRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360

Query: 361 EEGMRAARLGENDNDKNDMKVDEEPEAPMRIVKNWKRPEERVPAERDQTKFVVSPITGEL 420
           EEGMRAARLGENDNDKNDMKVDEEPE PMRIVKNWKRPEER+PAERD TKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERIPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDLNDATNNDARNLP 540
           EEVSNAVKAEIE KK+DQPKQVIWDGHTGSIGRTANQAMSQNLVGED ND T NDARNLP
Sbjct: 481 EEVSNAVKAEIEKKKDDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDPNDTTYNDARNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTQISGGLTVPPPQPPVISMIPPV 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPS+P NAHYS  I+ GL V  PQPPVISMIP V
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSMPPNAHYSNPIT-GLPVHQPQPPVISMIPSV 600

Query: 601 QPPPPAMHGQQSFFMNRPPSMPPPMSMNAPNMSVPPPPGSQFTHMPVPRPFVPLPAPPPM 660
           QPPPPAM GQQS+FMNRPPSMPPPMSMNAPNMSVPPPPGSQFT MPVPRPFVPLPAPPPM
Sbjct: 601 QPPPPAMPGQQSYFMNRPPSMPPPMSMNAPNMSVPPPPGSQFTPMPVPRPFVPLPAPPPM 660

Query: 661 NTMLHPPPMPQGVPPPPMPQGSMPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ 720
           N+M+ PPPMPQGVPPPPMPQGS+PPLPP+EAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ
Sbjct: 661 NSMMPPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ 720

Query: 721 HSGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG 780
           H GP+RITVSVPNLDDGNLKGQ+LEITVQSL+ETVGSLKEKIAGEIQLPANKQKLSGKPG
Sbjct: 721 HPGPIRITVSVPNLDDGNLKGQILEITVQSLSETVGSLKEKIAGEIQLPANKQKLSGKPG 780

Query: 781 FLKDNMSLAYYNVGAGEALSLSLRERGGRKR 809
           FLKDNMSLAYYNVGAGEALSLSLRERGGRKR
Sbjct: 781 FLKDNMSLAYYNVGAGEALSLSLRERGGRKR 810

[Close]

BLAST of Lsi09G016650 vs. NCBI nr
Match: XP_038884734.1 (probable splicing factor 3A subunit 1 [Benincasa hispida])

HSP 1 Score: 1465.3 bits (3792), Expect = 0.0e+00
Identity = 773/812 (95.20%), Postives = 788/812 (97.04%), Query Frame = 0


Query: 1   MFGSFGPILSLPAPSEDSKPTVQDEQDEIINNDEVDKDKTNSAPVSVATHTKTIGIIHPP 60
           M GSFGPIL+LPAPSEDSKPTVQDEQDEIINN+EVDKD TNSAP SVATHTKTIGIIHPP
Sbjct: 1   MLGSFGPILTLPAPSEDSKPTVQDEQDEIINNNEVDKDNTNSAPASVATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKT+QFVAKNGPEFEKRIIANNAGNVKFNFLN SDPYHAYYQHRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHAYYQHRLSEFRAQNQ 120

Query: 121 SSAQQPEKAADSAAPAL--SGPAADNNETMAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
           SSAQQP +AADSAAPA   SGPAADNNETM+AKPDVSALFKPVRKVLEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQAADSAAPASAPSGPAADNNETMSAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIITLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDII LTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEVVEPGKEMEMDMDEEEMQLV 360
           HDFVVVEAIDFADDEDEDLPPPMTL+EVIRRSKISVAEEE+VEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLDEVIRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360

Query: 361 EEGMRAARLGENDNDKNDMKVDEEPEAPMRIVKNWKRPEERVPAERDQTKFVVSPITGEL 420
           EEGMRAARLGENDNDKNDMKVDEE E PMRIVKNWKRPEERVPAERD TKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKVDEESEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLAR RPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDLNDATNNDARNLP 540
           EEVSNAVKAEIE KKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGED NDATN+DARNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDQNDATNSDARNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTQISGGLTVPPPQPPVISMIPPV 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPSLPM+AHYST ISGGL +PPPQPPVISMIP V
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMSAHYSTSISGGLPIPPPQPPVISMIPSV 600

Query: 601 QPPPPAMHGQQSFFMNRPPSMPPPMSMNAPNMSV-PPPPGSQFTHMPVPRPFVPLPAPPP 660
           QPPPPA+ GQQ FFMNRPPSMPPPMSMNAPNMSV PPPPGSQFTHM VPRPFVPLPAPPP
Sbjct: 601 QPPPPAIPGQQPFFMNRPPSMPPPMSMNAPNMSVPPPPPGSQFTHMQVPRPFVPLPAPPP 660

Query: 661 MNTMLHPPPMPQGVPPPPMPQGSMPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEDQFLA 720
           MNTM+ PPPMPQGVPPPPMPQGS+PPLPP+EAPPPLPDEPEPKRQKLDDSLLMPEDQFLA
Sbjct: 661 MNTMIQPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLA 720

Query: 721 QHSGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKP 780
           QH GPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKP
Sbjct: 721 QHPGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKP 780

Query: 781 GFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 809
           GFLKDNMSLAYYNVGAGEALS+SLRERGGRKR
Sbjct: 781 GFLKDNMSLAYYNVGAGEALSISLRERGGRKR 812

[Close]

BLAST of Lsi09G016650 vs. NCBI nr
Match: XP_008441262.1 (PREDICTED: probable splicing factor 3A subunit 1 [Cucumis melo] >TYK06683.1 putative splicing factor 3A subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 1458.0 bits (3773), Expect = 0.0e+00
Identity = 772/811 (95.19%), Postives = 783/811 (96.55%), Query Frame = 0


Query: 1   MFGSFGPILSLPAPSEDSKPTVQDEQDEIINNDEVDKDKTNSAPVSVATHTKTIGIIHPP 60
           M GSFGPIL+LPAPSEDSKPTVQDEQDEIINN+EVDKD TNSAP SVATHTKTIGIIHPP
Sbjct: 1   MLGSFGPILTLPAPSEDSKPTVQDEQDEIINNNEVDKDNTNSAPTSVATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKT+QFVAKNGPEFEKRIIANNAGNVKFNFLN SDPYH YYQHRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHGYYQHRLSEFRAQNQ 120

Query: 121 SSAQQPEKAADSAAPAL--SGPAADNNETMAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
           SSAQQP +  DS AP    SGPA+DNNET+AAKPDVSALFKPVRKVLEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQ--DSVAPVSTPSGPASDNNETIAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIITLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDII LTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEVVEPGKEMEMDMDEEEMQLV 360
           HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEE+VEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360

Query: 361 EEGMRAARLGENDNDKNDMKVDEEPEAPMRIVKNWKRPEERVPAERDQTKFVVSPITGEL 420
           EEGMRAARLGENDNDKNDMKVDEEPE PMRIVKNWKRPEERVPAERD TKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLAR RPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDLNDATNNDARNLP 540
           EEVSNAVKAEIE KKEDQPKQVIWDGHTGSIGRTANQAMSQNL  ED NDATNNDARNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNL--EDQNDATNNDARNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTQISGGLTVPPPQPPVISMIPPV 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYST ISGGL +PPPQPPVISMIP V
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTPISGGLPIPPPQPPVISMIPSV 600

Query: 601 QPPPPAMHGQQSFFMNRPPSMPPPMSMNAPNMSVPPPPGSQFTHMPVPRPFVPLPAPPPM 660
           QPPPPAM GQQSFFMNRPPS+PPPMSMNAPNMSVPPPPGSQFTHM VPRPFVPLPAPPPM
Sbjct: 601 QPPPPAMPGQQSFFMNRPPSIPPPMSMNAPNMSVPPPPGSQFTHMQVPRPFVPLPAPPPM 660

Query: 661 NTMLHPPPMPQGVPPPPMPQGSMPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ 720
           NTM+ PPPMPQGVPPPPMPQGSMPPLPP+EAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ
Sbjct: 661 NTMIPPPPMPQGVPPPPMPQGSMPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ 720

Query: 721 HSGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG 780
           H GPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG
Sbjct: 721 HPGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG 780

Query: 781 FLKDNMSLAYYNVGAGEALSLSLRERGGRKR 809
           FLKDNMSLAYYNVGAGEALSLSLRERGGRKR
Sbjct: 781 FLKDNMSLAYYNVGAGEALSLSLRERGGRKR 807

[Close]

BLAST of Lsi09G016650 vs. NCBI nr
Match: XP_004138633.1 (probable splicing factor 3A subunit 1 [Cucumis sativus])

HSP 1 Score: 1456.0 bits (3768), Expect = 0.0e+00
Identity = 770/811 (94.94%), Postives = 780/811 (96.18%), Query Frame = 0


Query: 1   MFGSFGPILSLPAPSEDSKPTVQDEQDEIINNDEVDKDKTNSAPVSVATHTKTIGIIHPP 60
           M GSFGPIL+LPAPSEDSKPTVQD QDEIINN+EVDKD TNSAP SVATHTKTIGIIHPP
Sbjct: 1   MLGSFGPILTLPAPSEDSKPTVQDVQDEIINNNEVDKDNTNSAPTSVATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKT+QFVAKNGPEFEKRIIANNAGNVKFNFLN SDPYH YYQHRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHGYYQHRLSEFRAQNQ 120

Query: 121 SSAQQPEKAADSAAPAL--SGPAADNNETMAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
           SSAQQP + ADS APA   SGP ADNNET+AAKPDVSALFKPVRKVLEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQGADSVAPASAPSGPTADNNETIAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIITLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDII LTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLTEKLKK+VTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKNVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEVVEPGKEMEMDMDEEEMQLV 360
           HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEE+VEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360

Query: 361 EEGMRAARLGENDNDKNDMKVDEEPEAPMRIVKNWKRPEERVPAERDQTKFVVSPITGEL 420
           EEGMRAARLGENDNDKNDMKVDEEPE PMRIVKNWKRPEERVPAERD TKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLAR RPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDLNDATNNDARNLP 540
           EEVSNAVKAEIE KKEDQPKQVIWDGHTGSIGRTANQAMSQNL  ED NDATNNDARNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNL--EDQNDATNNDARNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTQISGGLTVPPPQPPVISMIPPV 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYST ISGGL +PPPQPPVISMIP V
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTPISGGLPIPPPQPPVISMIPSV 600

Query: 601 QPPPPAMHGQQSFFMNRPPSMPPPMSMNAPNMSVPPPPGSQFTHMPVPRPFVPLPAPPPM 660
           QPPPPAM GQQSFFMNRPPSMPP MSMNAPNMSVPPPPGSQFTHM VPRPFVPLPAPPPM
Sbjct: 601 QPPPPAMPGQQSFFMNRPPSMPPQMSMNAPNMSVPPPPGSQFTHMQVPRPFVPLPAPPPM 660

Query: 661 NTMLHPPPMPQGVPPPPMPQGSMPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ 720
           NTM+ PPPMPQGVPPPPMPQG MPPLPP+EAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ
Sbjct: 661 NTMIPPPPMPQGVPPPPMPQGLMPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ 720

Query: 721 HSGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG 780
           H GPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG
Sbjct: 721 HPGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG 780

Query: 781 FLKDNMSLAYYNVGAGEALSLSLRERGGRKR 809
           FLKDNMSLAYYNVGAGE LSLSLRERGGRKR
Sbjct: 781 FLKDNMSLAYYNVGAGEGLSLSLRERGGRKR 809

[Close]

BLAST of Lsi09G016650 vs. NCBI nr
Match: XP_022137825.1 (probable splicing factor 3A subunit 1 isoform X1 [Momordica charantia] >XP_022137826.1 probable splicing factor 3A subunit 1 isoform X1 [Momordica charantia])

HSP 1 Score: 1449.5 bits (3751), Expect = 0.0e+00
Identity = 765/811 (94.33%), Postives = 781/811 (96.30%), Query Frame = 0


Query: 1   MFGSFGPILSLPAPSEDSKPTVQDEQDEIINNDEVDKDKTNSAPVSVATHTKTIGIIHPP 60
           M GSFGPIL+LPAPSEDSK TVQDE+DEIINN++ DKDKTNSAP SVATHTKTIGIIHPP
Sbjct: 1   MLGSFGPILTLPAPSEDSKLTVQDEKDEIINNNDGDKDKTNSAPASVATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKTAQFVAKNGP+FEKRIIANNAGNVKFNFLNSSDPYHAYY HRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTAQFVAKNGPDFEKRIIANNAGNVKFNFLNSSDPYHAYYHHRLSEFRAQNQ 120

Query: 121 SSAQQPEKAADSAAPAL--SGPAADNNETMAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
           SSAQQP +AADSAAPAL  SGPAAD+NET+AAKPDVSALFKPVRKVLEPPEAEQYTVRLP
Sbjct: 121 SSAQQPLQAADSAAPALAPSGPAADSNETLAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIITLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDII LTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLT KLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTLKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEVVEPGKEMEMDMDEEEMQLV 360
           HDFVVVE IDFADDEDEDLPPPMTLEEVIRRSKISVAEEE+VEPGKEMEM+MDEEEMQLV
Sbjct: 301 HDFVVVEGIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMEMDEEEMQLV 360

Query: 361 EEGMRAARLGENDNDKNDMKVDEEPEAPMRIVKNWKRPEERVPAERDQTKFVVSPITGEL 420
           EEGMR ARLGENDNDKNDMKVDEEPE PMRIVKNWKRPEERVPAERD TKFVVSPITGEL
Sbjct: 361 EEGMRTARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDLNDATNNDARNLP 540
           EEVSNAVKAEIE KKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGED ND TNND RNLP
Sbjct: 481 EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDQNDGTNNDIRNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTQISGGLTVPPPQPPVISMIPPV 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPSLP NAHYSTQISGGL VP PQPPVISMIP V
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPQPQPPVISMIPSV 600

Query: 601 QPPPPAMHGQQSFFMNRPPSMPPPMSMNAPNMSVPPPPGSQFTHMPVPRPFVPLPAPPPM 660
           QPPPPAM GQQ +FMNRPPSMPPPMSMNAPNM VPPPPGSQFT MPVPRPFVPLPAPPPM
Sbjct: 601 QPPPPAMPGQQPYFMNRPPSMPPPMSMNAPNMGVPPPPGSQFTPMPVPRPFVPLPAPPPM 660

Query: 661 NTMLHPPPMPQGVPPPPMPQGSMPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ 720
           NTM+ PPPMPQG+PPPPMPQGS+PPLPPEEAPPPLPDEPEPKRQKLDDSLLMPE+QFLAQ
Sbjct: 661 NTMMLPPPMPQGIPPPPMPQGSLPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEEQFLAQ 720

Query: 721 HSGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG 780
           H GP+RITVSVPNLDDGNLKGQVL ITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG
Sbjct: 721 HPGPIRITVSVPNLDDGNLKGQVLGITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG 780

Query: 781 FLKDNMSLAYYNVGAGEALSLSLRERGGRKR 809
           FLKDNMSLAYYNVGAGE LSLSLRERGGRKR
Sbjct: 781 FLKDNMSLAYYNVGAGEPLSLSLRERGGRKR 811

[Close]

BLAST of Lsi09G016650 vs. NCBI nr
Match: XP_022973826.1 (probable splicing factor 3A subunit 1 [Cucurbita maxima])

HSP 1 Score: 1445.6 bits (3741), Expect = 0.0e+00
Identity = 762/811 (93.96%), Postives = 784/811 (96.67%), Query Frame = 0


Query: 1   MFGSFGPILSLPAPSEDSKPTVQDEQDEIINNDEVDKDKTNSAPVSVATHTKTIGIIHPP 60
           M GSFGPIL+LPAPSEDSKPTVQDEQDEIIN+ EVDKDKTNSAPVS+ATHTKTIGIIHPP
Sbjct: 1   MLGSFGPILTLPAPSEDSKPTVQDEQDEIINDHEVDKDKTNSAPVSIATHTKTIGIIHPP 60

Query: 61  PDIRSIVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ 120
           PDIRSIVDKT+QFVAKNGPEFEKRIIANNAGNVKFNFL+ SDPYHAYYQHRLSEFRAQNQ
Sbjct: 61  PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLSPSDPYHAYYQHRLSEFRAQNQ 120

Query: 121 SSAQQPEKAADSAAPAL--SGPAADNNETMAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180
           SSAQQP +AADSA PA   SGPAA++NETMAAKPDVSALFKPVRKVLEPPEAEQYTVRLP
Sbjct: 121 SSAQQPSQAADSAVPASAPSGPAAESNETMAAKPDVSALFKPVRKVLEPPEAEQYTVRLP 180

Query: 181 EGITGEELDIITLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240
           EGITGEELDII LTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
Sbjct: 181 EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS 240

Query: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300
           KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW
Sbjct: 241 KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW 300

Query: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEVVEPGKEMEMDMDEEEMQLV 360
           HDFVVVEAIDFADDEDEDLPPPMTLEEV+RRSKISVAEEE+VEPGKEMEMDMDEEEMQLV
Sbjct: 301 HDFVVVEAIDFADDEDEDLPPPMTLEEVVRRSKISVAEEEIVEPGKEMEMDMDEEEMQLV 360

Query: 361 EEGMRAARLGENDNDKNDMKVDEEPEAPMRIVKNWKRPEERVPAERDQTKFVVSPITGEL 420
           EEGMRAARLGENDNDKNDMKVDEEPE PMRIVKNWKRPEER+PAERD TKFVVSPITGEL
Sbjct: 361 EEGMRAARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERIPAERDHTKFVVSPITGEL 420

Query: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480
           IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE
Sbjct: 421 IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE 480

Query: 481 EEVSNAVKAEIE-KKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDLNDATNNDARNLP 540
           EEVSNAVKAEIE KK+DQPKQVIWDGHTGSIGRTANQAMSQNLVGED ND T NDARNLP
Sbjct: 481 EEVSNAVKAEIEKKKDDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDPNDTTYNDARNLP 540

Query: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTQISGGLTVPPPQPPVISMIPPV 600
           GPAALPPKPGVPSVRPLPPPPGLALNLPS+P NAHYS  I+ GL V  PQPPVISMIP V
Sbjct: 541 GPAALPPKPGVPSVRPLPPPPGLALNLPSMPPNAHYSNPIT-GLPVHQPQPPVISMIPSV 600

Query: 601 QPPPPAMHGQQSFFMNRPPSMPPPMSMNAPNMSVPPPPGSQFTHMPVPRPFVPLPAPPPM 660
           QPPPPAM GQQS+FMNRPPSMPPPMSMNAPNMSVPPPPGSQFT MPVPRPFVPLPAPPPM
Sbjct: 601 QPPPPAMPGQQSYFMNRPPSMPPPMSMNAPNMSVPPPPGSQFTPMPVPRPFVPLPAPPPM 660

Query: 661 NTMLHPPPMPQGVPPPPMPQGSMPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ 720
           N+M+ PPPMPQGVPPPPMPQGS+PPLPP+EAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ
Sbjct: 661 NSMMPPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQ 720

Query: 721 HSGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG 780
           H GP+RITVSVPNLDDGNLKGQ+LEITVQSL+ETVGSLKEKIAGEIQLPANKQKLSGKPG
Sbjct: 721 HPGPIRITVSVPNLDDGNLKGQILEITVQSLSETVGSLKEKIAGEIQLPANKQKLSGKPG 780

Query: 781 FLKDNMSLAYYNVGAGEALSLSLRERGGRKR 809
           FLKDNMSLAYYNVGAGEALSLSLRERGGRKR
Sbjct: 781 FLKDNMSLAYYNVGAGEALSLSLRERGGRKR 810

[Close]

BLAST of Lsi09G016650 vs. TAIR 10
Match: AT1G14650.1 (SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein )

HSP 1 Score: 949.1 bits (2452), Expect = 2.3e-276
Identity = 552/822 (67.15%), Postives = 629/822 (76.52%), Query Frame = 0


Query: 1   MFGSFGPILSLPAPSEDSK--PTVQDE-QDEIINNDEVDKDKTNS---APVSVATHTKTI 60
           MF S   IL L AP  D K  P    +  D+ +   E+  ++ NS    P +VATHT+TI
Sbjct: 1   MFSSM-QILPLEAPPTDGKLGPLPPSQLTDQEVEERELQAEQNNSNLAPPAAVATHTRTI 60

Query: 61  GIIHPPPDIRSIVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSE 120
           GIIHPPPDIR+IV+KTAQFV+KNG EFEKRII +N  N KFNFL SSDPYHA+YQH+L+E
Sbjct: 61  GIIHPPPDIRTIVEKTAQFVSKNGLEFEKRIIVSNEKNAKFNFLKSSDPYHAFYQHKLTE 120

Query: 121 FRAQNQSSAQQPEKAADSAAPALSGPAADNNETMAAKPDVSALFKPVRKVLEPPEAEQYT 180
           +RAQN+  AQ  + +  +  P L   AAD +E    +PD+ A F+   K LE PE E+YT
Sbjct: 121 YRAQNKDGAQGTDDSDGTTDPQLDTGAADESEAGDTQPDLQAQFRIPSKPLEAPEPEKYT 180

Query: 181 VRLPEGITGEELDIITLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLA 240
           VRLPEGITGEELDII LTAQFVARNGKSFLTGL++RE NNPQFHF+KPTHSMF FFTSL 
Sbjct: 181 VRLPEGITGEELDIIKLTAQFVARNGKSFLTGLSNRENNNPQFHFMKPTHSMFTFFTSLV 240

Query: 241 DAYSKVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMA 300
           DAYS+VLMPPK L EKL+KS  D+TTVLERC+HRLEW+RSQEQ ++K EDE E ER+QMA
Sbjct: 241 DAYSEVLMPPKDLKEKLRKSAADLTTVLERCLHRLEWDRSQEQQKKKEEDEKELERVQMA 300

Query: 301 MIDWHDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEE-EVVEPGKEMEMDMDEE 360
           MIDWHDFVVVE+IDFAD+EDE+LPPPMTL+EVIRRSK S  EE E+VEPGKE+EM+MDEE
Sbjct: 301 MIDWHDFVVVESIDFADEEDEELPPPMTLDEVIRRSKASAMEEDEIVEPGKEVEMEMDEE 360

Query: 361 EMQLVEEGMRAARLGENDNDKNDMKVDEEPEAPMRIVKNWKRPEERVPAERDQTKFVVSP 420
           E++LV EGMRAA L EN   +N   V +E EAPMRIVKNWKRPE+R+P ERD TK V+SP
Sbjct: 361 EVKLVAEGMRAANLEENVKIEN---VHDE-EAPMRIVKNWKRPEDRIPTERDPTKVVISP 420

Query: 421 ITGELIPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDI 480
           ITGELIPINEMSEHMRISLIDPK+KEQK+RMFAKIRETTLAQDDEI++NIVGLAR RPDI
Sbjct: 421 ITGELIPINEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDI 480

Query: 481 FGTTEEEVSNAVKAEIEKKED-QPKQVIWDGHTGSIGRTANQAMSQNLVGEDLNDATNND 540
           FGTTEEEVSNAVKAEIEKK+D QPKQVIWDGHTGSIGRTANQA+SQN  GE+  D    D
Sbjct: 481 FGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQALSQNANGEEQGDGVYGD 540

Query: 541 ARNLPGPAAL-PPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTQISGGLTVPPPQPPVI 600
             + PGPAAL PP+PGVP VRPLPPPP LALNLP  P +A Y            P+P  +
Sbjct: 541 PNSFPGPAALPPPRPGVPIVRPLPPPPNLALNLPRPPPSAQYP---------GAPRPLGV 600

Query: 601 SMIPPV----QPPPPAMHGQQSFFMNRPPSMPPPMSMNAPNMSVPPPPGSQFT-HMPVPR 660
            M+ P+    Q   P   G     MNRPP M        P M VPPPPGSQF  HM +PR
Sbjct: 601 PMMQPMHQQHQLTMPGPPGHPQMMMNRPPQM-------QPGMHVPPPPGSQFAHHMQIPR 660

Query: 661 PFVPLPAPPPMNTMLHPPPMPQGVPPPPMPQGSMPPLPPEEAPPPLPDEPEPKRQKLDDS 720
           P+  L  PP    M+ PPPMP G+ PPP         PPEEAPPPLP+EPE KRQK D+S
Sbjct: 661 PYGQL--PPSAMGMMQPPPMP-GMAPPP---------PPEEAPPPLPEEPEAKRQKFDES 720

Query: 721 LLMPEDQFLAQHSGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLP 780
            L+PEDQFLAQH GP  I VS PN +D    GQ +EITVQSL+E VGSLKEKIAGEIQ+P
Sbjct: 721 ALVPEDQFLAQHPGPATIRVSKPNEND----GQFMEITVQSLSENVGSLKEKIAGEIQIP 780

Query: 781 ANKQKLSGKPGFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 809
           ANKQKLSGK GFLKDNMSLA+YNVGAGE L+LSLRERGGRKR
Sbjct: 781 ANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRKR 785

[Close]

BLAST of Lsi09G016650 vs. TAIR 10
Match: AT1G14650.2 (SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein )

HSP 1 Score: 949.1 bits (2452), Expect = 2.3e-276
Identity = 552/822 (67.15%), Postives = 629/822 (76.52%), Query Frame = 0


Query: 1   MFGSFGPILSLPAPSEDSK--PTVQDE-QDEIINNDEVDKDKTNS---APVSVATHTKTI 60
           MF S   IL L AP  D K  P    +  D+ +   E+  ++ NS    P +VATHT+TI
Sbjct: 1   MFSSM-QILPLEAPPTDGKLGPLPPSQLTDQEVEERELQAEQNNSNLAPPAAVATHTRTI 60

Query: 61  GIIHPPPDIRSIVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSE 120
           GIIHPPPDIR+IV+KTAQFV+KNG EFEKRII +N  N KFNFL SSDPYHA+YQH+L+E
Sbjct: 61  GIIHPPPDIRTIVEKTAQFVSKNGLEFEKRIIVSNEKNAKFNFLKSSDPYHAFYQHKLTE 120

Query: 121 FRAQNQSSAQQPEKAADSAAPALSGPAADNNETMAAKPDVSALFKPVRKVLEPPEAEQYT 180
           +RAQN+  AQ  + +  +  P L   AAD +E    +PD+ A F+   K LE PE E+YT
Sbjct: 121 YRAQNKDGAQGTDDSDGTTDPQLDTGAADESEAGDTQPDLQAQFRIPSKPLEAPEPEKYT 180

Query: 181 VRLPEGITGEELDIITLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLA 240
           VRLPEGITGEELDII LTAQFVARNGKSFLTGL++RE NNPQFHF+KPTHSMF FFTSL 
Sbjct: 181 VRLPEGITGEELDIIKLTAQFVARNGKSFLTGLSNRENNNPQFHFMKPTHSMFTFFTSLV 240

Query: 241 DAYSKVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMA 300
           DAYS+VLMPPK L EKL+KS  D+TTVLERC+HRLEW+RSQEQ ++K EDE E ER+QMA
Sbjct: 241 DAYSEVLMPPKDLKEKLRKSAADLTTVLERCLHRLEWDRSQEQQKKKEEDEKELERVQMA 300

Query: 301 MIDWHDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEE-EVVEPGKEMEMDMDEE 360
           MIDWHDFVVVE+IDFAD+EDE+LPPPMTL+EVIRRSK S  EE E+VEPGKE+EM+MDEE
Sbjct: 301 MIDWHDFVVVESIDFADEEDEELPPPMTLDEVIRRSKASAMEEDEIVEPGKEVEMEMDEE 360

Query: 361 EMQLVEEGMRAARLGENDNDKNDMKVDEEPEAPMRIVKNWKRPEERVPAERDQTKFVVSP 420
           E++LV EGMRAA L EN   +N   V +E EAPMRIVKNWKRPE+R+P ERD TK V+SP
Sbjct: 361 EVKLVAEGMRAANLEENVKIEN---VHDE-EAPMRIVKNWKRPEDRIPTERDPTKVVISP 420

Query: 421 ITGELIPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDI 480
           ITGELIPINEMSEHMRISLIDPK+KEQK+RMFAKIRETTLAQDDEI++NIVGLAR RPDI
Sbjct: 421 ITGELIPINEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDI 480

Query: 481 FGTTEEEVSNAVKAEIEKKED-QPKQVIWDGHTGSIGRTANQAMSQNLVGEDLNDATNND 540
           FGTTEEEVSNAVKAEIEKK+D QPKQVIWDGHTGSIGRTANQA+SQN  GE+  D    D
Sbjct: 481 FGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQALSQNANGEEQGDGVYGD 540

Query: 541 ARNLPGPAAL-PPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTQISGGLTVPPPQPPVI 600
             + PGPAAL PP+PGVP VRPLPPPP LALNLP  P +A Y            P+P  +
Sbjct: 541 PNSFPGPAALPPPRPGVPIVRPLPPPPNLALNLPRPPPSAQYP---------GAPRPLGV 600

Query: 601 SMIPPV----QPPPPAMHGQQSFFMNRPPSMPPPMSMNAPNMSVPPPPGSQFT-HMPVPR 660
            M+ P+    Q   P   G     MNRPP M        P M VPPPPGSQF  HM +PR
Sbjct: 601 PMMQPMHQQHQLTMPGPPGHPQMMMNRPPQM-------QPGMHVPPPPGSQFAHHMQIPR 660

Query: 661 PFVPLPAPPPMNTMLHPPPMPQGVPPPPMPQGSMPPLPPEEAPPPLPDEPEPKRQKLDDS 720
           P+  L  PP    M+ PPPMP G+ PPP         PPEEAPPPLP+EPE KRQK D+S
Sbjct: 661 PYGQL--PPSAMGMMQPPPMP-GMAPPP---------PPEEAPPPLPEEPEAKRQKFDES 720

Query: 721 LLMPEDQFLAQHSGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLP 780
            L+PEDQFLAQH GP  I VS PN +D    GQ +EITVQSL+E VGSLKEKIAGEIQ+P
Sbjct: 721 ALVPEDQFLAQHPGPATIRVSKPNEND----GQFMEITVQSLSENVGSLKEKIAGEIQIP 780

Query: 781 ANKQKLSGKPGFLKDNMSLAYYNVGAGEALSLSLRERGGRKR 809
           ANKQKLSGK GFLKDNMSLA+YNVGAGE L+LSLRERGGRKR
Sbjct: 781 ANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRKR 785

[Close]

BLAST of Lsi09G016650 vs. TAIR 10
Match: AT1G14640.1 (SWAP (Suppressor-of-White-APricot)/surp domain-containing protein )

HSP 1 Score: 783.5 bits (2022), Expect = 1.6e-226
Identity = 469/778 (60.28%), Postives = 558/778 (71.72%), Query Frame = 0


Query: 1   MFGSFGPILSLPAPSEDSK----PTVQDEQDEIINND-EVDKDKTNSAPVSVATHTKTIG 60
           MF S   IL L AP  D      P  Q   +EI  N+ + +++ +   P++VATHT  IG
Sbjct: 1   MFNSM-KILPLEAPPADGNLGPLPPSQLTDEEIKENEFQGEQNNSIQTPIAVATHTNPIG 60

Query: 61  IIHPPPDIRSIVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEF 120
           II+PPP+IR IV+ TAQFV++NG  F  ++    A N  F+FL S +PYH +Y+++++E+
Sbjct: 61  IIYPPPEIRKIVETTAQFVSQNGLAFGNKVKTEKANNANFSFLKSDNPYHGFYRYKVTEY 120

Query: 121 RAQNQSSAQQPEKAADSAAPALSGPAADNNETMAAKPDVSALFKPVRKVLEPPEAEQYTV 180
               +  AQ  +   D+  P L       ++   AKPD+ A F+  RK+LE PE E+YTV
Sbjct: 121 SCHIRDGAQGTD-VDDTEDPKL-------DDESDAKPDLQAQFRAPRKILEAPEPEKYTV 180

Query: 181 RLPEGITGEELDIITLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLAD 240
           RLPEGI   ELDII  TAQFVARNG+SFL  L  RE+NN QF F+KPTHSMF FFTSL D
Sbjct: 181 RLPEGIMEAELDIIKHTAQFVARNGQSFLRELMRREVNNSQFQFMKPTHSMFTFFTSLVD 240

Query: 241 AYSKVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAM 300
           AYS+VLMPP+ L EKL+KSV D+TTVLERC++RLEW+R QE+ + K EDE E+ER+QM M
Sbjct: 241 AYSEVLMPPRDLKEKLRKSVADLTTVLERCLNRLEWDRFQEEEKNKEEDEKEKERVQMVM 300

Query: 301 IDWHDFVVVEAIDFADDEDEDLPPPMTLEEVIRRSKISVAEE-EVVEPGKEMEMDMDEEE 360
           IDW DF VVE+IDFAD+ED+DLP PMTLEEVIRRSK+S  EE E+VEPGKE+EMDMDEEE
Sbjct: 301 IDWKDFAVVESIDFADEEDKDLPMPMTLEEVIRRSKVSAMEEDEIVEPGKEVEMDMDEEE 360

Query: 361 MQLVEEGMRAARLGENDNDKNDMKVDEEPEAPMRIVKNWKRPEERVPAERDQTKFVVSPI 420
           ++LV EGMRAA L E         V+ E EAPMRIVKNWKRPE+R   ERD +K V+S I
Sbjct: 361 VKLVAEGMRAANLEEYVG-----SVEIEEEAPMRIVKNWKRPEDRFLTERDSSKVVISRI 420

Query: 421 TGELIPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIF 480
           TGELIPI EMSEHMRISLIDPK+KEQK+RMFAKIRETTLAQDDEI++NIVGLAR RPDIF
Sbjct: 421 TGELIPITEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIF 480

Query: 481 GTTEEEVSNAVKAEIEKKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDLNDATNNDAR 540
           GTTEEEVSNAVKA+IEKK++QPKQVIWDGHTGSIGRTANQA++QN  GE   D    D  
Sbjct: 481 GTTEEEVSNAVKADIEKKDEQPKQVIWDGHTGSIGRTANQALTQNSNGEQ-GDGVYGDPN 540

Query: 541 NLPGPAAL-PPKPGVPSVRPLPPPPGLALNLPSLPMNAHYSTQISGGLTVPPPQPPVISM 600
           + PGPAA  PP+PGVP+VRPLPPP  LALNLP  P +  Y      G   P   P +  M
Sbjct: 541 SFPGPAAFPPPRPGVPTVRPLPPPQNLALNLPRPPPSVQYP-----GAPRPLGVPMMQPM 600

Query: 601 IPPVQPPPPAMHGQQSFFMNRPPSMPPPMSMNAPNMSVPPPPGSQFTHMPVPRPFVPLPA 660
               Q      HG  S  M+RPP M P        M VPPPPGSQF+HM VP+P+  L  
Sbjct: 601 YQQHQLSMSGPHGHPSMMMSRPPQMQPV-------MRVPPPPGSQFSHMQVPQPYGQL-- 660

Query: 661 PPPMNTMLHPPPMPQGVPPPPMPQGSMPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEDQ 720
           PP    M+ PPPM + +PPPP         PP EAPPPLP+EPEPKRQKLD+S L+PEDQ
Sbjct: 661 PPLSMGMMQPPPMAE-MPPPP---------PPGEAPPPLPEEPEPKRQKLDESALVPEDQ 720

Query: 721 FLAQHSGPVRITVSVPNLDDGNLKGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQK 772
           FLAQH GP  I VS PN +D    GQV+EITVQSL+E VGSLKEKIAGE+Q+PANKQK
Sbjct: 721 FLAQHPGPATIRVSKPNEND----GQVMEITVQSLSENVGSLKEKIAGEMQIPANKQK 735

[Close]

BLAST of Lsi09G016650 vs. TAIR 10
Match: AT5G12280.1 (SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein )

HSP 1 Score: 122.9 bits (307), Expect = 1.2e-27
Identity = 75/123 (60.98%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 677 QGSMPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQHSGPVRITVSVPNLDDGNL 736
           Q  MPPL  E       +EPE      D+S+L+PEDQFLAQH G   I VSVP+ DD   
Sbjct: 310 QPRMPPLGGES------EEPE-----FDESVLVPEDQFLAQHPGSSTIMVSVPDPDD--- 369

Query: 737 KGQVLEITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPGFLKDNMSLAYYNVGAGEAL 796
             +V++ITVQSL+E V SLKEKI+GEIQ P NKQKL GK GFLKDN SLA+YNVGAGE L
Sbjct: 370 -WKVVKITVQSLSENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNVGAGEIL 417

Query: 797 SLS 800
           +LS
Sbjct: 430 TLS 417

HSP 2 Score: 65.9 bits (159), Expect = 1.8e-10
Identity = 82/285 (28.77%), Postives = 118/285 (41.40%), Query Frame = 0


Query: 35  VDKDKTNSAPVSVATHTKTIGIIHPPPDIRSIVDKTAQFVAKNGPEFEKRIIANNAGNVK 94
           ++KD +N AP              PP ++R  +DK A+ VA+ G   E++I+        
Sbjct: 77  LEKDNSNEAPA------------EPPREMRIHMDKIARVVARKGLRIERKIM-------- 136

Query: 95  FNFLNSSDPYHAYYQHRLSEFRAQNQ-SSAQQPEKAADSAAPALSGPAADNNETMAAKPD 154
                            +SE+ A+NQ   AQ+PE      APA              K D
Sbjct: 137 ----------------NVSEYLAKNQDEGAQEPE------APA------------TLKGD 196

Query: 155 VSALFKPVRKVLEPPEAEQYTVRLPEGITGEELDIITLTAQFVARNGKSFLTGLTSREIN 214
                +P       P+   Y   LPEG T E++D I LTAQ V R G+ F   L     N
Sbjct: 197 AQHYRRPFLLSDPAPKFPDYV--LPEGYTIEDVDTIFLTAQIVGRYGEEFWLDLIKEVDN 256

Query: 215 NPQFHFLKPTHSMFMFFTSLADAYSKVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWER 274
            PQF FLKP  S F +F  L+      ++  +GL    K + + M  V +   + L   R
Sbjct: 257 KPQFEFLKPADSKFDYFNRLS------VVASEGLKRSEKLTSSRMAIVSKAFFYHL---R 294

Query: 275 SQEQARQKAEDEIEQERIQMAMIDWHDFVVVEAIDFADDEDEDLP 319
            Q + R+    E   +   +     + FV  +   FAD +DEDLP
Sbjct: 317 RQNEKRELTHKEGAAKACTL-FGALYAFVGPDGC-FADIKDEDLP 294

[Close]

BLAST of Lsi09G016650 vs. TAIR 10
Match: AT5G06520.1 (SWAP (Suppressor-of-White-APricot)/surp domain-containing protein )

HSP 1 Score: 120.2 bits (300), Expect = 7.8e-27
Identity = 98/269 (36.43%), Postives = 136/269 (50.56%), Query Frame = 0


Query: 9   LSLPAPSEDSKPTVQDEQDEIINNDEVDKDKTNSAPVSVATHTKTIGIIHPPPDIRSIVD 68
           L +P PS  S P          N+ +  +  +N AP SVA        I PPP+IRS V+
Sbjct: 355 LQVPQPS-CSPPVRMMSPPRPQNDLQSGQSNSNKAPASVAP-------IEPPPEIRSCVE 414

Query: 69  KTAQFVAKNGPEFEKRIIANNAGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQSSAQQPEK 128
            TA  V+KNG E E++++  +  + +  F+ S+DPYHA+YQ +L+E+RAQNQ  A     
Sbjct: 415 NTALIVSKNGLEIERKMMELSMNDARHRFVWSTDPYHAFYQLKLAEYRAQNQDRAHD--- 474

Query: 129 AADSAAPALSGPAADNNETMAAKPDVSALFKPVRKVLEPPEAEQYTVRLPEGITGEELDI 188
                                 +P+V   F       E PE E         IT +EL I
Sbjct: 475 ---------------------IQPNVLRSF---GFGFEFPEKE---------ITLKELGI 534

Query: 189 ITLTAQFVARNGKSFLTGLTSREINNPQFHFLKPT-HSMFMFFTSLADAYSKVLMPPKGL 248
           I LTAQF+AR G +F+ GL  R + NPQF FL+ T +S F F+  L  AYS+VLMP K  
Sbjct: 535 IKLTAQFMARYGMNFVQGLRKRVVGNPQFKFLESTNNSRFSFYNGLVIAYSRVLMPSK-- 575

Query: 249 TEKLKKSVTDMTTVLERCVHRLEWERSQE 277
              L KS     TV++  +  L+ E+ +E
Sbjct: 595 --MLSKSDDCTATVVDGFLSCLQLEKREE 575

The following BLAST results are available for this feature:

BLAST of Lsi09G016650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RXF1	3.2e-275	67.15	Probable splicing factor 3A subunit 1 OS=Arabidopsis thaliana OX=3702 GN=At1g146...	[more]
Q8K4Z5	5.3e-113	38.42	Splicing factor 3A subunit 1 OS=Mus musculus OX=10090 GN=Sf3a1 PE=1 SV=1	[more]
A2VDN6	1.6e-112	37.90	Splicing factor 3A subunit 1 OS=Bos taurus OX=9913 GN=SF3A1 PE=2 SV=1	[more]
Q15459	1.6e-112	37.84	Splicing factor 3A subunit 1 OS=Homo sapiens OX=9606 GN=SF3A1 PE=1 SV=1	[more]
Q86A14	2.6e-67	29.23	Probable splicing factor 3A subunit 1 OS=Dictyostelium discoideum OX=44689 GN=sf...	[more]

BLAST of Lsi09G016650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C426	0.0e+00	95.19	Putative splicing factor 3A subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3B308	0.0e+00	95.19	probable splicing factor 3A subunit 1 OS=Cucumis melo OX=3656 GN=LOC103485445 PE...	[more]
A0A0A0LMI9	0.0e+00	94.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404860 PE=4 SV=1	[more]
A0A6J1C7R8	0.0e+00	94.33	probable splicing factor 3A subunit 1 isoform X1 OS=Momordica charantia OX=3673 ...	[more]
A0A6J1I9P7	0.0e+00	93.96	probable splicing factor 3A subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC11147237...	[more]

BLAST of Lsi09G016650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884734.1	0.0e+00	95.20	probable splicing factor 3A subunit 1 [Benincasa hispida]	[more]
XP_008441262.1	0.0e+00	95.19	PREDICTED: probable splicing factor 3A subunit 1 [Cucumis melo] >TYK06683.1 puta...	[more]
XP_004138633.1	0.0e+00	94.94	probable splicing factor 3A subunit 1 [Cucumis sativus]	[more]
XP_022137825.1	0.0e+00	94.33	probable splicing factor 3A subunit 1 isoform X1 [Momordica charantia] >XP_02213...	[more]
XP_022973826.1	0.0e+00	93.96	probable splicing factor 3A subunit 1 [Cucurbita maxima]	[more]

BLAST of Lsi09G016650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14650.1	2.3e-276	67.15	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin fa...	[more]
AT1G14650.2	2.3e-276	67.15	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin fa...	[more]
AT1G14640.1	1.6e-226	60.28	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein	[more]
AT5G12280.1	1.2e-27	60.98	SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein	[more]
AT5G06520.1	7.8e-27	36.43	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 272..292
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 584..605 score: 34.55 coord: 541..557 score: 42.35 coord: 660..685 score: 30.77 coord: 642..659 score: 33.33
None	No IPR available	GENE3D	3.10.20.90		coord: 697..807 e-value: 1.0E-31 score: 111.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 659..701
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 659..691
None	No IPR available	PANTHER	PTHR15316:SF9	SPLICING FACTOR 3A SUBUNIT 1-RELATED	coord: 22..808
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 724..801 e-value: 7.0E-11 score: 52.2
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 736..803 e-value: 4.7E-8 score: 32.7
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 749..805 score: 14.207658
IPR000061	SWAP/Surp	SMART	SM00648	surpneu2	coord: 64..117 e-value: 7.7E-25 score: 98.5 coord: 186..239 e-value: 1.8E-19 score: 80.7
IPR000061	SWAP/Surp	PFAM	PF01805	Surp	coord: 64..115 e-value: 9.9E-22 score: 76.7 coord: 186..237 e-value: 1.7E-16 score: 59.9
IPR000061	SWAP/Surp	PROSITE	PS50128	SURP	coord: 188..230 score: 16.508881
IPR000061	SWAP/Surp	PROSITE	PS50128	SURP	coord: 66..108 score: 18.470839
IPR035967	SWAP/Surp superfamily	GENE3D	1.10.10.790	Surp module	coord: 50..123 e-value: 5.8E-28 score: 98.3
IPR035967	SWAP/Surp superfamily	GENE3D	1.10.10.790	Surp module	coord: 181..239 e-value: 1.1E-23 score: 84.9
IPR035967	SWAP/Surp superfamily	SUPERFAMILY	109905	Surp module (SWAP domain)	coord: 44..116
IPR035967	SWAP/Surp superfamily	SUPERFAMILY	109905	Surp module (SWAP domain)	coord: 165..238
IPR022030	Splicing factor 3A subunit 1, conserved domain	PFAM	PF12230	PRP21_like_P	coord: 255..468 e-value: 1.1E-57 score: 195.4
IPR045146	Splicing factor 3A subunit 1	PANTHER	PTHR15316	SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED	coord: 22..808
IPR035563	Splicing factor 3A subunit 1, ubiquitin domain	CDD	cd01800	Ubl_SF3a120	coord: 721..801 e-value: 3.30377E-30 score: 112.281
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 702..806

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G016650.1	Lsi09G016650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
biological_process	GO:0045292	mRNA cis splicing, via spliceosome
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0005686	U2 snRNP
cellular_component	GO:0071004	U2-type prespliceosome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding