Lsi09G016330 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G016330
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Alanine-tRNA ligase
Location	chr09: 24633441 .. 24646238 (-)
RNA-Seq Expression	Lsi09G016330
Synteny	Lsi09G016330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATAATTTCACCTAATTTAACGTTAGAAAAACCTTATAAGAATCTTAGAAAGTAGGAAAAACTCATTTCTCTCTAAAAATCTGGGTCATCAGAATTTCCCTTAAAAAAAAAAGAAAAAGAAAAAGAAAAAGAAAAAAGAAAGAAGTAAAAGAAAAAAACGCTCAACGCCAGCAGAAGCATCGAGCAAAACCCGGGGCGGGGCTCAGTGAAACCAAGTTTTCAGAATTTAATTTAGCGAATCAGCGTATATAATCCACCGAGGAAGAAACTCTGTTGCAATGGCGATGGATGCTGGATCATCGTCCTCCCAAGAAAATCAATCATTTCCTTCCTATCACCATGAATCTTCTCCAGGGAAACCTCAATCATTGGAAGACTTAGCTAAGCCTTGGGCCGAGTACGCAGCTCAACAGGCGCTGCTATACCAGCGGGCTATCGACCACTCCTTGGAGTCTGCCATTGAAGCCTCCAAATCTCGCCTTTCTCAGATTCGTTCCACCTCTTATCCTCATTTCCAGAAGGCCATTGTAATTTCTCTCTCTCTTTTTTTCCTTTAGTTCTATGTTTAGTTTCCAATTAAGAATGGATGTTAGTTTAGGTCTCCAAGAGAAAGGGGTTGAAAGAACGTGTTGGATTGTTGTCAATTCGTTGATGTTTCGGTCGACCGATGCTGCTTGTGTATAATTTGATTTCATTATATCTAATCTAATAGTTAAAATAGCTCCAATGTGTGGCCGTTGGCAAGGGCTTGGGGCCACTTGGTCATATCGATTTTGAGGTCCAACATTCGAACCTTCAAGTGAGCTTAATGTCAAAAACTTTAAAACGTCTCCTGGGTCCGAGCCTTGGGGGGCGCAGATGCCCGGGTATAGGGGAGTAAAGCTGAATAACCAAACTCCAGACCTAGCCTGATGAATGTTCAAATGAAAACGCCTTTGTTTAATTGGTAAAATCATTTTTATCTAGTCGATAGATTTAGATGCATTCAACAAATTATGTGACAACTTTGGAGGTAGGCTATGATTGGACAGTCAGGCTGCATAACAAATTGAGCTGATTTCTTTTATGGAGATATACTTTTATTGGAGAGGTCAGGTTGTCCAACTGTATCCTTAACTTCTAAGGTTTTAGAAACCCTCTTCTTTCTTTGAAGTTTGTGTATTTGGGGTTACATTTCTGCTGATCTTCAACTCTCTAGCATGAAAACAGCAATGGGGGATAAGTTGGGTCAAACTATGGGGGCAGTGTTTGAAATGGTAGCATTGTAGTTTTCCCGTAGCTTTTAATGATAGAACAGGATTTTCCCCATCAAAAGTATAAGTGCATAATGATTGATATCATAGTTTTGAGGAAATAGCAAGAACTCCTGCAAAGTCAACGGATGGAACAGAACATTCTTAATGTTTTATCTAGCTGGATGTTGTTGGGGTTGATATTTTTCCAATAAGTTTGGGCAGTAATATACCATGCAATATAGAACTGGTGGCAGTCATAAGGCTTCATTTGATAACCATTTAGTTTTTGAAAATTGTGCTTATTATCTTACAATTTCTTTACAACATTTCACATCTTTCTTAAGAAAATATTAAAATTCTTAACTAAATTCAAAAAACAAAAAAAAACTCTTAAAAACTATTTTATTTTATTTTATTTTAGTTTTCAACACCCAAAACCAAAAACCAAATGGTTTTCAAAGGACCATAGTTTTCTACCCACAATCTTGCTGCTTTTTAATTATTTATAGATAGTGCATTCTGTCTCAGTAGAGGGATTCTGAATTCGTTGAATTTTATAGTCTATGATGGTTCTGTTCCATGTACTTTGAATAATCTTGTTTTGGCTTTTTCTTAATGAGTAAAACAAATTAATTTTTCTTCTTGGAACATGAATGAAATATTCAAAGAGTACAAAATGTGCATATAAACAGGATTACAAAATATTCCTCCACTTAGATACAAGGAAATTTAAGTTGTAACTATCGAGGGGCTGTATATTAAAATAGGGCATTGAAATTGGATGATTCAAGACCATCCCCAGGGGATCTTTCTTTTCCTTTGAAAAATCCTAGAACTTCTCTCTTCTCATATCTTCCAAAGAATGGCTCTGATAATGCTAGCCCATAAATGCCCTTTTGTTGCCTTAAAAGGGGGATCAGTGAACAACATTATGATTCACGCAGTTGTGTCCAATGGAGCAGCAATATGCCAACCAACAGCCCAGATTTCAGCAGCATAAGAACAATGGAAGTAGATAGGATTTTGGGATTCATTATCCTTTTTGCAAAGGCAGCATCAGGAAGGAGAAATTTGATGCCAAGGGCATTTTTTTTTGCAACCTATCCACCGTATCATGAGGCAGGAGTGGACTATTTCCCATAGAAGAAACTTGACTCTCTTTGGACAAGGAAATTTCCATAATTGTTTGAAGAGATCCTTCATGGATGAAGTTGTTCCCGAGGTAAGGTGTGATATTAATGATTCGACAATAAAAAAGCCTTTGTTATCCAAATTCCAGATCCAAATGTCCTCCCTCAGTGTGATATTGAGAGTGGGATGTGTTGATTTAAGGAGACCGATTTGGAAATTTCATCCTCCTTAAGGTTTGTTCTAAAGTTCAGCACCCAAGATGAGTTATCAAATATTTTGGAATTTAAGATGCAAGTTATATGCTTGTTTTATCTCGTCTTGATGCCATTTACATGGCCTAATCTTTGAAAGCTCTTGTTTCTCACAATAATAATTGTAATTTATATTGTTTCCTTTTATTTTCTTGCCAAAATAAATGATACATACTCTTTATAATGGAGACCTCATTTGATAGTACCTTTCTCATTCCATTGCCAACTTTTGACTCTGCTGTTTTTGTTTTATTTAACATTATTCTCTAAACTTATCATTTTATGCATTGAAAACATGCCTCTAGGATTCCTTTTGGGAGGCAAAGTCCGAGCTTGCTGCTTATGAGAATTTATTATTTGGAAAAATTAGAGGTTTGTTCCTCATTTATCATTGTGATGGAAAATTGGTTTTTAACTTACCTTCCTTCTTTGTTTTCTTTTTTCCCCCCTCGAATATTTAAATAACTGAAAATTGTTGTTCTAATTTTTTATTCTGCAGATGGTATTCTTGTTGCTGCATCACATCCATTGATCAGTTGTGGCGTTGCAACTGGCCTGGGTTTCTTAGTCTTCAAAAGTATGATATCATTTATTGATTGGTTTTAATTTTATGATAAGATTTTTTAATGGGTAGTTATAAATTCATAGATTCGTTTACTTCAAATACATTCTTTGTCTAATCATTTTTCCATATTTCCTATCTCCCAAAATCAATTGCTTTCTAATGACACCAAATTATTCAAGCATGTTAGAAATGATTTTGAATTTTTATCTAATTAAATCTTCGAAAAGCACATACATTGTTGCACTACAATAAATTCACAGTTCACCTAGATTTGGAGGCTACTTATGTAGTCGGTGCATGAAACTTGTAACATTCTGAATCTTGAGCATTTATTTTTCAACAGTACTAATATTCTGTTTGATCCTGCAGAGCCCAGAAATTTCTTATACTACAAAACCGTTCGACTTTTCGTGAATGAAGAGGTGAGCAAATTTTGATCTATCATAATTAAAAAAGAAAAAGAAAAAAAAAAGAGAGAAAAAGTTTAATAAGTGGAAGTCCAGGTAGAGGTTCTGATTCAGATATGTACTAGTCAGTGAAAGACTGTAGTTACTGGTTCCTTGTGAGCTAATCTTCCCAAAAGATGTTTATTTGATTTGGCCGCACATTCCCATAACAATTTTAAGGCTGAAACAGTTGTCTGAGATTTCCTTGTATTTTGAAACAAATTTCGACCTACTGTTTCTTTGGATTTTCCTGTGGTTATTTGTGAATTAATGGTGGTTATGAAGCCCATATTTACTTAATATTATGGATTAACGTGGGGTTCTATTGTTGTGGAAATCTCCAAACCTGCTTCCTCGTAAAGTAATGTTCTTGTATCTGAGCTTGCGAATGCCAAGTCCACCTTTTCTATGGTTAAAAGCTCTATTCTAGCAATTCGATGACGTGCCATCAGTAGCTTTACCTAATCCTTAATCTTTTATAAGAACGTTAGCTGTCTGTCTTGATATTTGAAAACCCAACATATAATATTGGGAGTTCGATACAACAGTTTGTATAATAGTCATTAGTCAACCTACCTCCCTTTGAGAATATGATGTTTTCCCATTTCTCAATATTCTAGAGAATCTTTCCACTACAAGGTTCTGGGAAAGGAAAGGCTTGCTTCCAACGGACATGCCAAGATAATCGAGTAGGAGGATTCCAACTGCGGCGAAAGATTCCAGTTTTTCCTGAACTGTTTTATGGTGGTCAATAATAAAGCCTGGGAGAGTACTTTTGGCTAACGTTGATCCTCATACCAGGAGCTAATTTGGAAACTATTAGTATGCCAATGATCTTGTGAAGCTCATCATCATCGTAGTCATTAAAAATTCAGATGTTAGCTATGAAGGAAGATAATTGATGGGAATCTGAAGACTTTTAAATATTCTATTTCTCAGGACGTGAAATGTCTCTTGAGAAACCAAGCTACTGCCTGCAGTTGTTCAATCACAAACATTAAAGCAGAGACTACATCGTAGTAACTTCATCCAATCACACAGACTTGGACAAGATTACAAACGTGGGCTCAAACCTTCCAAGGACGCTAATTTCTGTAATGAGTTGATTTCCTAAAGCTAACAACTCTCCTTTACTTGGAACCGCATGAACATGCTTCAGATTGACTCCAATTCATCACTCTTGGGCTGGAAGTTAGTCTTTCCATTCAACAAGTTAGGCAGAAGCAGGGGAAGTTTGTGTTCAAGTGCAACTTAGAACTCAAGGACACAGTTTTACAACCTATAGAACAGTGTTAGGTACTTAAGCACCTTGGAGAACCACACCCCAAAAGCTAGCTATTGAGGTGGGAGAGCTAAGCCACTCAAGTACCACATTGGTCATCCCATTCTAACCAGTGTGATGTCGGACAAAGGTAACTCGTACTACCTTGGTTCCTAACAATACCCCATCCCCAGAAAGCCTACGTCCTGGCGGCTACTCCAACGGTACTTCACTCGGCCACACCTGGTCAGAACCCTCCACTGGTTCCACTCTAGAACGTCAACCGGCTCTGATACTATTGTTAGGTACTTAAGCACCTTGGAGAACCACACCCCAAAAGCTAGCTATTGAGGTGGGAGAGGTAAGCCACCTAAGTACCACATTGGTCATCCCATTCTAACCAATGTGGGACAAAGGTAGCTCATACTACCTTGGTTCCTAACAAACATATCCTATTCAAGTAAGATCGTGTGCTCAACAAGATGAAGTAAGTGCAACTTGATCAATAGGAAGGCCAAACACCTATCTGATTGATGTTAGGTTCATCCAATAGGTGAAGTGCCTAGATTGGTTTACAAACATGGCAGTAGTCAAGAAGAAGAACAAGTAGAGGGTCTACACAGACTGTCTTAAAGATTAAGGTTAGGAACAAGGCATGCCCAAGGTTTATTTTCCACTCTCATGGACACCTTAGCCTACCTCTAGATTTCATGTTTCCAGCTAACCAAGGGAATATTGCATTTTGTCGTGCATATTAGTAAATAATGCTCTTTGGCTGAAGAGTTGGAGGGCAATGCAGACTACCCAACCAAATGTTCAATGACCAAATTTAACAAGACAATTACTGGACTATTGTCTTAAACCCAATTTAACACGACAATTACCCTAAACGTCTAAAAGAATTGGTGTTTCTCCCTTGAGCTTAATTCTTTTTGTAACATGATTGTTGCTAATGAGTTTTGTCCTCATCCTTTTGAATGACTGTCAGGCGGGGTTAAAGGCACTTACTGTGGAAGGATATTTCTAAGGAGCTTTCTTCTTTCACTTATTTGGTCTATTGTGTGGTGGGGGAGGGAAGAATGTGTACTTTTGAGAAGATTAGTGGGTGGGGAATAGACCCCCCCTGCTCTATGTTCCCTCATCTCTTTTATCCTACTTCCTTTAAAAACCATGTGGTGCCTTGCTTTTAGTTTTTGATGATTTGGTCAGGGAGCTCCTTTTCTTTTCGTTCAAGTTTCGTCACTCTTTGTTCGATAGGGAGCCACGAGGGTTGTCTCTCTTTTTCCATGCTTGAGTCGTTTGTTTTTAGTTAGACATGGGAGAAGGGACATTCGTCGAGTCCCAACCCTTTGGAGGGATTCTCATGCAATTCCTTTTTCTGTAGTTTGATAGACCCTTCTCCCTTACTTGAGTCTAAGGGGTCCTGTGTAATCACCACTCTCCTAATCGGAAATGTGTGCATGTATATACACCCGAAAGTTCATTCTTTACTCTAATATGCTTTCACACCAATGTATGGTTCTATACTTACTTTGGCGTCAAATTTCTTTGGTTGACATCCACTTGAAACATGTTTGATTAATTGATTTATTATTCTTTGCTCCAGGGCACGAGCTTTGATTATTCTTATTTTTCAGCCACCTCATTAGGGCTAAAAATGACCTGTTACTCATGTGTTTGAATTCGTATCATAATTCATACCTTATCACCGACCTTGCATTGCCTATATATATAGATTCCTTACATTACAATTAAATTGTACTTGTTTATATGACGTTATTTAGGCTCTAAAGTTTGAAATGCTAAAACTGTGAATTAGATTTGGAATGTTAAAAAATATAATTTGAAACAAGACTGTCTATGCCAAATAATATTTATTTAAATTATTTATTTCCTAACTAACTTAGTGTATTATTTATCTAAAGCTGACTGTTATTTTAGACATCTGCTCATGCATGCACACACATATGGGGGTTGGAAATTTCCCCTATGTAGGATAGATTTTTTATTCTAATTTAACGTGCATGATTTTTACCAATACATTGGCATTCTGTTACTTAGTAAAAATTGGCACATTTGATACTTTTTTATATTATATACTTGAATTTTAATAAAATTTATTAGAGCATGTTTTCTGCCATGAAGGATGTAATATTTTCCTAGAATTATAGCTTTCTTAAAATTAGTGTCAGCTACTCCTATAGAGAAAACCCAGACCCAATTTGAACAAAACATTATACTTGTACTCATGAAATATTATCCATCCTCAATTCAATTCTACATACTAAATGCGCCCAAATTGAATTTATTCTATGAATGGCCATTCCCTCTCATTATACAATTCTGAATTTAATTAATTTATCCTGTTATTCCAACTTTTACAAATTTTATTATTTCTTTAATGGTCATGGAAAGTCCCATCTTTATATTGGTTTTGCAGTCCTTACTTTCCAAAGCTGATGCTAAAGTAAAAGAGTTGCGACAGTCAATTGATCGGATAAAGGTTGAAAGTGAGAGGCTGGAGGTAGGATTATATATTTCTTTTAAATCCTCAATTCATTATCGCTGATGGAAAATTTAGTAAAATTGTCACATGAATACCTTTGTGTTTATTAAATTGTAAAGAAAAATGATTCTTTTCAGGGAAATGCCACTTTTACAATGTATAAGATATTGCTACAAAGTTTGATAAAACTTATTATAAAGTCTTTGCATAGAAGAAAAAAGTTCAAATCCAAAAGATTCATTAAAGAAAACAGTGAAAAGAAAACCTTCTGGACTTGTATGAAACTTCGAAGCTGATGGAGAAACTTGATGATGTGTATGGTGCTTTGTTATGGAGGAAAAAGTGTGAAGATTCAAGAGAAAAGAAATAAAAGCTTTGTTGTTTTAGTAGTCATGGGAAGCTAGGATGCTTGGTAGAGACGACGGTGAATTTAGAATACCACAAAAATTGGAAATTCTTTAGGAACATAAGCATTGCAGAAGGATCAGTTGGTGTGGCAACTAGCAAGCCAAGGAGACTTGTCTCTGGTTATCTACATCCCTATCATCTGATGAAGGGAGCTTGGCCCTTGGCTTTTCAGTAGAAGATAAGGAGATCGTGGCAGAGTTCATGACTTTGTAAGCGAGTTACAATTTTCAATGAGAGAGGAGTTCATGGAAGTATGCTTTTTGTAAGCAAGTTACAATTTTCAATGAGAGAGGAGTTCATGGAAGTATGCTAAAGGGTTGTTGGATGGTCGATGGTGTAATAAACGATAATGGAGAACTATTTTCAGAGAAGGAGGTGACATTGCCTTTCAGCATAGTGGAGGGAGACTCACCTTAAGAAAAAAAATAATTTTTTTAGGAAAAACAATCAACATCCAGTTTTGAGTGGGATTCCCATAGACTTCTCTTTTTAGAGCCCCACATTCTGTGTGTAAGAGCCAGGAGAAGCTTATGAGAGATTTACTATGGGAAGGTCTGCTTGGTAAATTGAGAAACTATTGGCAAACCCGTTCTGGCCAAGAGGTCATGGGTTTAATACATGATGGCCACTTACCTAAGAATTAATACTTACGAGTTTCCTTGACACCCAAATGTTGTAGGGTCAGGCGGGTTATCCCGTGAGACTTAGTTATTGGCAAACCCGTTCACCTAGGAGGGTTGGAGCTAGGGAATTTAAGGGCTCATAATAATACCTTATTGGAAAAATTGTTATGGTGTTTTCTCCATGAGTCCTTTTCCCTGCAGTCTAGGATCATGACGAGCAAATATGTTCCTCATCCTTTTGATTGGATTTTAGGTAGGATTAAAGGCACATTCAGGACTCCACAGAAAGAGATTTCTTCGGATCTCTCCTCTTTCTTTGAGTTGATTCAGTGTGTTGGGGATAAGGGGTTTGAGACTTACTTCTAGGAGAACAAGTGGTTGGGAGATCGCCCTCGTTGCAGCAAGTGTCCTCATCTTCATGATCTTCCTGCTAAGAAAAATTGTTTTGTTGCAGATATTATGTTGTTTTCAAGGAGCTCACTCTCTTTAATTGTTTGGTTTTCGTCGTCCTTCATCCAATAGGAAAATGGCAGAGGTTATGACCTTCCTTTCTTTATTAGGTATGTTGAGGTTAGGTAAGGGAGAAAGGAAACTCGTTGTTGGAGTCTTATCTCTTCCAAGGGGTTCTCTTCTAAATCTCTCTTTCAGTACTTACTAGATCCTTCTCCCTTTAAAGAGTTAGTTTTCTTTGTTCTTTGGATGGTAAAAATCCCTAAGAAGGTGAAGTTCTTTTTTTTTGGTAGGTTATCATGGATACCTTGGACATGCTTTCGAGGAAGATCTCGTCCTTGGTTGGGCCTTTTTGCCGGTACTCTTTGTTGGAGGGCAGAGGAAGATTTGTATCTCTTATTTTGGAATTGTGCTTATGTGCGATCGGTTTGGAACATCTTCTTCGAGTTGTTTGACTATTAGATAGCCTTTCACATAGATTTTAGTATTATGATCAAGAAGTTCCTCCTCCATCCACTGCTTGAAAGGAGAGGGGGTATTTTATGGAAGATTGGGGTGTGCTATGGTGAGGTATTTGGGGCCAGATAAATAATAGTATCTTTCGTGGGGTTGAGAGGGAACCTTTCGATGTTTGGTCCCTAGAAAATTTATATGTTTCTCTCTAAGAGTTTGTGACGAGTTCTTTTTGTAGGATGGAGACTCTTCTTTTAGGGTACTCCCTTTTGTGGGGGGGGGGGGGGGGGGGGGGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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mRNA sequence

GATAATTTCACCTAATTTAACGTTAGAAAAACCTTATAAGAATCTTAGAAAGTAGGAAAAACTCATTTCTCTCTAAAAATCTGGGTCATCAGAATTTCCCTTAAAAAAAAAAGAAAAAGAAAAAGAAAAAGAAAAAAGAAAGAAGTAAAAGAAAAAAACGCTCAACGCCAGCAGAAGCATCGAGCAAAACCCGGGGCGGGGCTCAGTGAAACCAAGTTTTCAGAATTTAATTTAGCGAATCAGCGTATATAATCCACCGAGGAAGAAACTCTGTTGCAATGGCGATGGATGCTGGATCATCGTCCTCCCAAGAAAATCAATCATTTCCTTCCTATCACCATGAATCTTCTCCAGGGAAACCTCAATCATTGGAAGACTTAGCTAAGCCTTGGGCCGAGTACGCAGCTCAACAGGCGCTGCTATACCAGCGGGCTATCGACCACTCCTTGGAGTCTGCCATTGAAGCCTCCAAATCTCGCCTTTCTCAGATTCGTTCCACCTCTTATCCTCATTTCCAGAAGGCCATTGATTCCTTTTGGGAGGCAAAGTCCGAGCTTGCTGCTTATGAGAATTTATTATTTGGAAAAATTAGAGATGGTATTCTTGTTGCTGCATCACATCCATTGATCAGTTGTGGCGTTGCAACTGGCCTGGGTTTCTTAGTCTTCAAAAAGCCCAGAAATTTCTTATACTACAAAACCGTTCGACTTTTCGTGAATGAAGAGTCCTTACTTTCCAAAGCTGATGCTAAAGTAAAAGAGTTGCGACAGTCAATTGATCGGATAAAGGTTGAAAGTGAGAGGCTGGAGAAAAGAACACTTCAAGCTCAAGAGGAATTGATACGAGGAAGAACAAAACTCAGGCAAGCAGGAAAACAGATTGAAGGTGTGATTCAGTCGGCTTATAAAATTGAAAGAAAGGCAAGAGGTATACAAATGGGTTCTCTAGCCATGTTAAAATTGAAGGATGGTTTAAAAGATATTCTTGCAGATCTTCCCACAAGGGAAGCTTCACGATTTAGGACTCAGGTTTCTAACCTTGCTTCTGAGGCAAAGAAGGAAAGAATTGGCTTGAGCAAGGAGGTCTCAAAAATAAGCAACTATGGAATCTCTGTCTGATAAATTCAAATCCAATATTTAGCTCAGCCTCAACAATATTACTCCATCTCAAAATTCACTTGGTCTGGTCTGAAACCACTGCCTGCATATCCTCTCTCATCATTGTTTTTCTTTCATTTTCTCTTGGAGAAGGATGAGTTTCTTTTTTCTTCTTTTTTAAAGTGCTCGGCCAAAATAAGTTTTGAAGGTGACTTTGATTGTTCAGTATAATAATTATAGATGCAATACCAATAGAGTTGATTCTTTGGATAGAATCTTAATCCTAACAAACTCTTCTTGTACTTGTAAATTTGTTTTCGAATGGTCATGGGAGTGGATGGCCAAATTAAGCATAACAAATTTTACAATGTGGAATTAAATTAGGATACCAATTCAAAATTATCTCTTGTACTAAGAATTGTGAACTTAGTTAGCACGTCCATTGTACACTACTTTTACACTACTCGTGTATTAGTATCGACCAAATTGTCATTGTGTTTGTTGAAAATGTCCGTTTTGTCAAATTAGTATCTTGAAATATTGTCGCTTTATTACTAAGAAAACAAAACATGTATACATGAAGAGTTGGAGCACACTTGTTTTAGAAGGGTTGCTTACCTAAGAAGGTGATGCATAAACAAAGAGTGAGAGTTTCTGATGGTCACATTACATCCAAGTTGTACTCTCACCCATATCGTTTTTCTTATTTTTGCTTTTAATCAAGATAAGTTTTGTATACTCCTCTCACCACAA

Coding sequence (CDS)

ATGGCGATGGATGCTGGATCATCGTCCTCCCAAGAAAATCAATCATTTCCTTCCTATCACCATGAATCTTCTCCAGGGAAACCTCAATCATTGGAAGACTTAGCTAAGCCTTGGGCCGAGTACGCAGCTCAACAGGCGCTGCTATACCAGCGGGCTATCGACCACTCCTTGGAGTCTGCCATTGAAGCCTCCAAATCTCGCCTTTCTCAGATTCGTTCCACCTCTTATCCTCATTTCCAGAAGGCCATTGATTCCTTTTGGGAGGCAAAGTCCGAGCTTGCTGCTTATGAGAATTTATTATTTGGAAAAATTAGAGATGGTATTCTTGTTGCTGCATCACATCCATTGATCAGTTGTGGCGTTGCAACTGGCCTGGGTTTCTTAGTCTTCAAAAAGCCCAGAAATTTCTTATACTACAAAACCGTTCGACTTTTCGTGAATGAAGAGTCCTTACTTTCCAAAGCTGATGCTAAAGTAAAAGAGTTGCGACAGTCAATTGATCGGATAAAGGTTGAAAGTGAGAGGCTGGAGAAAAGAACACTTCAAGCTCAAGAGGAATTGATACGAGGAAGAACAAAACTCAGGCAAGCAGGAAAACAGATTGAAGGTGTGATTCAGTCGGCTTATAAAATTGAAAGAAAGGCAAGAGGTATACAAATGGGTTCTCTAGCCATGTTAAAATTGAAGGATGGTTTAAAAGATATTCTTGCAGATCTTCCCACAAGGGAAGCTTCACGATTTAGGACTCAGGTTTCTAACCTTGCTTCTGAGGCAAAGAAGGAAAGAATTGGCTTGAGCAAGGAGGTCTCAAAAATAAGCAACTATGGAATCTCTGTCTGA

Protein sequence

MAMDAGSSSSQENQSFPSYHHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLLFGKIRDGILVAASHPLISCGVATGLGFLVFKKPRNFLYYKTVRLFVNEESLLSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTKLRQAGKQIEGVIQSAYKIERKARGIQMGSLAMLKLKDGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV

Homology

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BLAST of Lsi09G016330 vs. ExPASy Swiss-Prot
Match: Q84K90 (RGS1-HXK1-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=RHIP1 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.0e-23
Identity = 70/230 (30.43%), Postives = 125/230 (54.35%), Query Frame = 0


Query: 50  QRAIDHSLESAIEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLLFGKIRDGIL 109
           QR +  S ++A+ +++S    +R  S   F+   D    A ++   YEN  F K+ D ++
Sbjct: 52  QRTVKESKDTAMRSARS----LRENSTSQFRSIQDFIPHALTQYKTYENAFFSKVTDELI 111

Query: 110 VAASHPLISCGVATGLGFLVFKKPRNFLYYKTVRLFVNEESLLSKADAKVKELRQSIDRI 169
            A  HP  + G+      ++ + PR FL+  T+  F +EE+   KA+  V+EL  S+D +
Sbjct: 112 YAKEHPAAAIGIGVAASLVLMRGPRRFLFRNTLGRFQSEEAQFLKAEKHVQELNMSVDLM 171

Query: 170 KVESERLEKRTLQAQEELIRGRTKLRQAGKQIEGVIQSAYKIERKARGIQMGSLAMLKLK 229
           K ES +L +RT  A++++ RG ++L  +G  I  + +S +K E +A            L 
Sbjct: 172 KKESRKLLERTALAEKDMKRGLSELMNSGNDIHRLAKSVHKAECEA----------ADLM 231

Query: 230 DGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 280
           DGL+ I    P R+A + R +V+++ S  +++RI L+K +  +S+ G+SV
Sbjct: 232 DGLRQI----PGRDAIKLRAEVASMTSLLRQKRIALNKRIMGMSDLGVSV 263

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BLAST of Lsi09G016330 vs. ExPASy TrEMBL
Match: A0A1S3CAD0 (uncharacterized protein LOC103498769 OS=Cucumis melo OX=3656 GN=LOC103498769 PE=4 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.6e-128
Identity = 256/279 (91.76%), Postives = 262/279 (93.91%), Query Frame = 0


Query: 1   MAMDAGSSSSQENQSFPSYHHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60
           MAMDAGSSSSQENQS PSYHHESS  KPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA
Sbjct: 1   MAMDAGSSSSQENQSSPSYHHESSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60

Query: 61  IEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLLFGKIRDGILVAASHPLISCG 120
           IEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENL+FGKIRDGILVAASHPLISCG
Sbjct: 61  IEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120

Query: 121 VATGLGFLVFKKPRNFLYYKTVRLFVNEESLLSKADAKVKELRQSIDRIKVESERLEKRT 180
           VATG+GFLVFKKPR+FLYYKTVRLF+NEESLLSKADAKVKELRQSIDRIKVESERLEKRT
Sbjct: 121 VATGMGFLVFKKPRSFLYYKTVRLFMNEESLLSKADAKVKELRQSIDRIKVESERLEKRT 180

Query: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAYKIERKARGIQMGSLAMLKLKDGLKDILADLP 240
           LQA+EELIRGRTKLRQAGKQIEGVIQSA+KIERKAR              GLKDILADLP
Sbjct: 181 LQAEEELIRGRTKLRQAGKQIEGVIQSAHKIERKAR--------------GLKDILADLP 240

Query: 241 TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 280
           TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV
Sbjct: 241 TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 265

[Close]

BLAST of Lsi09G016330 vs. ExPASy TrEMBL
Match: A0A5D3DNB0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003230 PE=4 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.3e-127
Identity = 254/277 (91.70%), Postives = 260/277 (93.86%), Query Frame = 0


Query: 3   MDAGSSSSQENQSFPSYHHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIE 62
           MDAGSSSSQENQS PSYHHESS  KPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIE
Sbjct: 1   MDAGSSSSQENQSSPSYHHESSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIE 60

Query: 63  ASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLLFGKIRDGILVAASHPLISCGVA 122
           ASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENL+FGKIRDGILVAASHPLISCGVA
Sbjct: 61  ASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCGVA 120

Query: 123 TGLGFLVFKKPRNFLYYKTVRLFVNEESLLSKADAKVKELRQSIDRIKVESERLEKRTLQ 182
           TG+GFLVFKKPR+FLYYKTVRLF+NEESLLSKADAKVKELRQSIDRIKVESERLEKRTLQ
Sbjct: 121 TGMGFLVFKKPRSFLYYKTVRLFMNEESLLSKADAKVKELRQSIDRIKVESERLEKRTLQ 180

Query: 183 AQEELIRGRTKLRQAGKQIEGVIQSAYKIERKARGIQMGSLAMLKLKDGLKDILADLPTR 242
           A+EELIRGRTKLRQAGKQIEGVIQSA+KIERKAR              GLKDILADLPTR
Sbjct: 181 AEEELIRGRTKLRQAGKQIEGVIQSAHKIERKAR--------------GLKDILADLPTR 240

Query: 243 EASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 280
           EASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV
Sbjct: 241 EASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 263

[Close]

BLAST of Lsi09G016330 vs. ExPASy TrEMBL
Match: A0A6J1L5I2 (uncharacterized protein LOC111499304 OS=Cucurbita maxima OX=3661 GN=LOC111499304 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 2.0e-118
Identity = 240/279 (86.02%), Postives = 252/279 (90.32%), Query Frame = 0


Query: 1   MAMDAGSSSSQENQSFPSYHHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60
           MAMDAGSSSS EN S  S HHESSPGKPQ+LEDLAK W  YAAQQA+LYQ AI+HSLESA
Sbjct: 1   MAMDAGSSSSLENPSSLSNHHESSPGKPQALEDLAKSWVGYAAQQAMLYQLAINHSLESA 60

Query: 61  IEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLLFGKIRDGILVAASHPLISCG 120
           +EASKSRLSQIRSTSYPHFQKAIDSF + KSE+A +ENLLFGK+RDGILVAASHPLISCG
Sbjct: 61  VEASKSRLSQIRSTSYPHFQKAIDSFQDVKSEVADFENLLFGKVRDGILVAASHPLISCG 120

Query: 121 VATGLGFLVFKKPRNFLYYKTVRLFVNEESLLSKADAKVKELRQSIDRIKVESERLEKRT 180
           VATG+G LVFKKPRNFLYYKTVRLFVNEE+LLSKADA+VKELRQSIDRIKVESERLEKRT
Sbjct: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT 180

Query: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAYKIERKARGIQMGSLAMLKLKDGLKDILADLP 240
           LQAQEELIRGRTKLRQAGKQIEGVIQSA+KIERKAR              GLKDILADLP
Sbjct: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKAR--------------GLKDILADLP 240

Query: 241 TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 280
           TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV
Sbjct: 241 TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 265

[Close]

BLAST of Lsi09G016330 vs. ExPASy TrEMBL
Match: A0A6J1H5U3 (uncharacterized protein LOC111460300 OS=Cucurbita moschata OX=3662 GN=LOC111460300 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 5.7e-118
Identity = 240/279 (86.02%), Postives = 252/279 (90.32%), Query Frame = 0


Query: 1   MAMDAGSSSSQENQSFPSYHHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60
           MAMDAGSSSS ENQS  S HHESS GKPQ+LEDLAK WA YAAQQA+LYQ AI+HSLESA
Sbjct: 1   MAMDAGSSSSLENQSSLSNHHESSLGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA 60

Query: 61  IEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLLFGKIRDGILVAASHPLISCG 120
           +EASKSRLSQIRSTSYPHFQKAIDSF + KSE+A +ENL FGK+RDGILVAASHPLISCG
Sbjct: 61  VEASKSRLSQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG 120

Query: 121 VATGLGFLVFKKPRNFLYYKTVRLFVNEESLLSKADAKVKELRQSIDRIKVESERLEKRT 180
           VATG+G LVFKKPRNFLYYKTVRLFVNEE+LLSKADA+VKELRQSIDRIKVESERLEKRT
Sbjct: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT 180

Query: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAYKIERKARGIQMGSLAMLKLKDGLKDILADLP 240
           LQAQEELIRGRTKLRQAGKQIEGVIQSA+KIERKAR              GLKDILADLP
Sbjct: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKAR--------------GLKDILADLP 240

Query: 241 TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 280
           TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV
Sbjct: 241 TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 265

[Close]

BLAST of Lsi09G016330 vs. ExPASy TrEMBL
Match: A0A6J1DXH1 (uncharacterized protein LOC111024998 OS=Momordica charantia OX=3673 GN=LOC111024998 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.6e-110
Identity = 229/279 (82.08%), Postives = 244/279 (87.46%), Query Frame = 0


Query: 1   MAMDAGSSSSQENQSFPSYHHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60
           MA D+GSSSS+E  S  S  +ESS GKPQSL  LAKPWA+YAA QALLYQR ID SLESA
Sbjct: 1   MATDSGSSSSEEELSSSSPLNESSSGKPQSLASLAKPWADYAAHQALLYQRTIDDSLESA 60

Query: 61  IEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLLFGKIRDGILVAASHPLISCG 120
           I+ASKSRLSQIRSTS+PH QK IDSF +AKSELAAYENLLFGKIRDGILVAASHPLISCG
Sbjct: 61  IQASKSRLSQIRSTSHPHLQKTIDSFQDAKSELAAYENLLFGKIRDGILVAASHPLISCG 120

Query: 121 VATGLGFLVFKKPRNFLYYKTVRLFVNEESLLSKADAKVKELRQSIDRIKVESERLEKRT 180
           VATGLGFLV KKPRNFLY+KT+RLF+NEESLLSKADA+VKELRQSIDRIKVESERLEKRT
Sbjct: 121 VATGLGFLVLKKPRNFLYHKTIRLFMNEESLLSKADAQVKELRQSIDRIKVESERLEKRT 180

Query: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAYKIERKARGIQMGSLAMLKLKDGLKDILADLP 240
           LQA+ EL+RGRTKLRQAGKQIEGVIQSA+ IERKAR              GLKDILADLP
Sbjct: 181 LQAEGELLRGRTKLRQAGKQIEGVIQSAHTIERKAR--------------GLKDILADLP 240

Query: 241 TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 280
           TREAS+FRTQVSNLASEAKKERI L KEVSKISNYGISV
Sbjct: 241 TREASQFRTQVSNLASEAKKERIALGKEVSKISNYGISV 265

[Close]

BLAST of Lsi09G016330 vs. NCBI nr
Match: XP_008459726.1 (PREDICTED: uncharacterized protein LOC103498769 [Cucumis melo])

HSP 1 Score: 468.8 bits (1205), Expect = 3.3e-128
Identity = 256/279 (91.76%), Postives = 262/279 (93.91%), Query Frame = 0


Query: 1   MAMDAGSSSSQENQSFPSYHHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60
           MAMDAGSSSSQENQS PSYHHESS  KPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA
Sbjct: 1   MAMDAGSSSSQENQSSPSYHHESSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60

Query: 61  IEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLLFGKIRDGILVAASHPLISCG 120
           IEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENL+FGKIRDGILVAASHPLISCG
Sbjct: 61  IEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120

Query: 121 VATGLGFLVFKKPRNFLYYKTVRLFVNEESLLSKADAKVKELRQSIDRIKVESERLEKRT 180
           VATG+GFLVFKKPR+FLYYKTVRLF+NEESLLSKADAKVKELRQSIDRIKVESERLEKRT
Sbjct: 121 VATGMGFLVFKKPRSFLYYKTVRLFMNEESLLSKADAKVKELRQSIDRIKVESERLEKRT 180

Query: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAYKIERKARGIQMGSLAMLKLKDGLKDILADLP 240
           LQA+EELIRGRTKLRQAGKQIEGVIQSA+KIERKAR              GLKDILADLP
Sbjct: 181 LQAEEELIRGRTKLRQAGKQIEGVIQSAHKIERKAR--------------GLKDILADLP 240

Query: 241 TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 280
           TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV
Sbjct: 241 TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 265

[Close]

BLAST of Lsi09G016330 vs. NCBI nr
Match: XP_011656867.1 (RGS1-HXK1-interacting protein 1 isoform X1 [Cucumis sativus] >KGN46566.2 hypothetical protein Csa_005221 [Cucumis sativus])

HSP 1 Score: 464.9 bits (1195), Expect = 4.8e-127
Identity = 252/279 (90.32%), Postives = 261/279 (93.55%), Query Frame = 0


Query: 1   MAMDAGSSSSQENQSFPSYHHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60
           MAMDAGSSSSQENQS PSYHH+SS  KPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA
Sbjct: 1   MAMDAGSSSSQENQSSPSYHHQSSSPKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60

Query: 61  IEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLLFGKIRDGILVAASHPLISCG 120
           IE SKSRLSQIRSTS+PHFQKA+DSFWEAKSELAAYENL+FGKIRDGILVAASHPLISCG
Sbjct: 61  IEVSKSRLSQIRSTSFPHFQKAVDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120

Query: 121 VATGLGFLVFKKPRNFLYYKTVRLFVNEESLLSKADAKVKELRQSIDRIKVESERLEKRT 180
           VATG+GFLVFKKPRNFLYYKT+RLFVNEESLLSKADAKVKELRQSIDRIKVESERLEKRT
Sbjct: 121 VATGMGFLVFKKPRNFLYYKTIRLFVNEESLLSKADAKVKELRQSIDRIKVESERLEKRT 180

Query: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAYKIERKARGIQMGSLAMLKLKDGLKDILADLP 240
           LQA++ELIRGRTKLRQAGKQIEGVIQSA+KIERKAR              GLKDILADLP
Sbjct: 181 LQAEDELIRGRTKLRQAGKQIEGVIQSAHKIERKAR--------------GLKDILADLP 240

Query: 241 TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 280
           TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV
Sbjct: 241 TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 265

[Close]

BLAST of Lsi09G016330 vs. NCBI nr
Match: TYK24760.1 (uncharacterized protein E5676_scaffold266G003230 [Cucumis melo var. makuwa])

HSP 1 Score: 464.9 bits (1195), Expect = 4.8e-127
Identity = 254/277 (91.70%), Postives = 260/277 (93.86%), Query Frame = 0


Query: 3   MDAGSSSSQENQSFPSYHHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIE 62
           MDAGSSSSQENQS PSYHHESS  KPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIE
Sbjct: 1   MDAGSSSSQENQSSPSYHHESSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIE 60

Query: 63  ASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLLFGKIRDGILVAASHPLISCGVA 122
           ASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENL+FGKIRDGILVAASHPLISCGVA
Sbjct: 61  ASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCGVA 120

Query: 123 TGLGFLVFKKPRNFLYYKTVRLFVNEESLLSKADAKVKELRQSIDRIKVESERLEKRTLQ 182
           TG+GFLVFKKPR+FLYYKTVRLF+NEESLLSKADAKVKELRQSIDRIKVESERLEKRTLQ
Sbjct: 121 TGMGFLVFKKPRSFLYYKTVRLFMNEESLLSKADAKVKELRQSIDRIKVESERLEKRTLQ 180

Query: 183 AQEELIRGRTKLRQAGKQIEGVIQSAYKIERKARGIQMGSLAMLKLKDGLKDILADLPTR 242
           A+EELIRGRTKLRQAGKQIEGVIQSA+KIERKAR              GLKDILADLPTR
Sbjct: 181 AEEELIRGRTKLRQAGKQIEGVIQSAHKIERKAR--------------GLKDILADLPTR 240

Query: 243 EASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 280
           EASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV
Sbjct: 241 EASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 263

[Close]

BLAST of Lsi09G016330 vs. NCBI nr
Match: XP_011656868.1 (RGS1-HXK1-interacting protein 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 456.8 bits (1174), Expect = 1.3e-124
Identity = 251/279 (89.96%), Postives = 259/279 (92.83%), Query Frame = 0


Query: 1   MAMDAGSSSSQENQSFPSYHHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60
           MAMDAGSSSSQENQS PSYHH+SS  KPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA
Sbjct: 1   MAMDAGSSSSQENQSSPSYHHQSSSPKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60

Query: 61  IEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLLFGKIRDGILVAASHPLISCG 120
           IE SKSRLSQIRSTS+PHFQK  DSFWEAKSELAAYENL+FGKIRDGILVAASHPLISCG
Sbjct: 61  IEVSKSRLSQIRSTSFPHFQK--DSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120

Query: 121 VATGLGFLVFKKPRNFLYYKTVRLFVNEESLLSKADAKVKELRQSIDRIKVESERLEKRT 180
           VATG+GFLVFKKPRNFLYYKT+RLFVNEESLLSKADAKVKELRQSIDRIKVESERLEKRT
Sbjct: 121 VATGMGFLVFKKPRNFLYYKTIRLFVNEESLLSKADAKVKELRQSIDRIKVESERLEKRT 180

Query: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAYKIERKARGIQMGSLAMLKLKDGLKDILADLP 240
           LQA++ELIRGRTKLRQAGKQIEGVIQSA+KIERKAR              GLKDILADLP
Sbjct: 181 LQAEDELIRGRTKLRQAGKQIEGVIQSAHKIERKAR--------------GLKDILADLP 240

Query: 241 TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 280
           TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV
Sbjct: 241 TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 263

[Close]

BLAST of Lsi09G016330 vs. NCBI nr
Match: XP_038875078.1 (LOW QUALITY PROTEIN: RGS1-HXK1-interacting protein 1 [Benincasa hispida])

HSP 1 Score: 455.7 bits (1171), Expect = 2.9e-124
Identity = 250/279 (89.61%), Postives = 256/279 (91.76%), Query Frame = 0


Query: 1   MAMDAGSSSSQENQSFPSYHHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60
           +AMDAGS SSQENQS PSYHHESSPGKPQSLEDLAK  AEYAAQQALLY RAIDH L+SA
Sbjct: 24  LAMDAGSPSSQENQSSPSYHHESSPGKPQSLEDLAKRLAEYAAQQALLYXRAIDHXLKSA 83

Query: 61  IEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLLFGKIRDGILVAASHPLISCG 120
           IEASKSRLSQIRSTSYPHFQKAID FWE KSELAAYEN+LFGKIRDGILVAASHPLISCG
Sbjct: 84  IEASKSRLSQIRSTSYPHFQKAIDFFWEGKSELAAYENVLFGKIRDGILVAASHPLISCG 143

Query: 121 VATGLGFLVFKKPRNFLYYKTVRLFVNEESLLSKADAKVKELRQSIDRIKVESERLEKRT 180
           VATG+GFLVFKKPRNFLYY+T+RLFVNEESLLSKADA VKELRQSIDRIKVESERLEKRT
Sbjct: 144 VATGMGFLVFKKPRNFLYYRTIRLFVNEESLLSKADANVKELRQSIDRIKVESERLEKRT 203

Query: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAYKIERKARGIQMGSLAMLKLKDGLKDILADLP 240
           LQAQEELIRGRTKLRQAGKQIEGVIQSAYKIERKAR              GLKDILADLP
Sbjct: 204 LQAQEELIRGRTKLRQAGKQIEGVIQSAYKIERKAR--------------GLKDILADLP 263

Query: 241 TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 280
           TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV
Sbjct: 264 TREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 288

[Close]

BLAST of Lsi09G016330 vs. TAIR 10
Match: AT2G45060.1 (Uncharacterised conserved protein UCP022280 )

HSP 1 Score: 262.3 bits (669), Expect = 4.4e-70
Identity = 154/285 (54.04%), Postives = 194/285 (68.07%), Query Frame = 0


Query: 2   AMDAGSSSSQENQSFPSYHHESSPGKPQSLEDL-------AKPWAEYAAQQALLYQRAID 61
           A+   SSS  +N   P    +SSP  P   + +       A  W + A +QAL+YQ+ I 
Sbjct: 3   ALGESSSSEMDNAKSPEI-QQSSPVHPPEYQKIATTTVENAASWIDDALRQALVYQKTIT 62

Query: 62  HSLESAIEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLLFGKIRDGILVAASH 121
            +++S I+ASK+RLSQIR TS  H  + IDS  +  SE   YE ++FGKI+DG+ VAASH
Sbjct: 63  ETVDSTIDASKARLSQIRDTSVAHTSQTIDSLRDIASEYNVYEQMVFGKIKDGVNVAASH 122

Query: 122 PLISCGVATGLGFLVFKKPRNFLYYKTVRLFVNEESLLSKADAKVKELRQSIDRIKVESE 181
           PLIS  +A G+G    KK R F+YY TVR+FV+EE+LLS+AD KVKELRQS+DR+K ESE
Sbjct: 123 PLISGTLAFGVGIFALKKTRRFVYYNTVRMFVSEEALLSRADLKVKELRQSMDRLKAESE 182

Query: 182 RLEKRTLQAQEELIRGRTKLRQAGKQIEGVIQSAYKIERKARGIQMGSLAMLKLKDGLKD 241
           +LE+    A+EE IRGR KLRQAGKQI G I SAYKIE++A               GLKD
Sbjct: 183 KLERVATVAEEEFIRGRMKLRQAGKQIRGAISSAYKIEKQAA--------------GLKD 242

Query: 242 ILADLPTREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 280
           +L +LPTREASRFRTQ+S  ASE K+ER  L+KEV+KISNYGISV
Sbjct: 243 VLKELPTREASRFRTQISKRASEVKQERNALTKEVNKISNYGISV 272

[Close]

BLAST of Lsi09G016330 vs. TAIR 10
Match: AT4G26410.1 (Uncharacterised conserved protein UCP022280 )

HSP 1 Score: 110.5 bits (275), Expect = 2.1e-24
Identity = 70/230 (30.43%), Postives = 125/230 (54.35%), Query Frame = 0


Query: 50  QRAIDHSLESAIEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLLFGKIRDGIL 109
           QR +  S ++A+ +++S    +R  S   F+   D    A ++   YEN  F K+ D ++
Sbjct: 52  QRTVKESKDTAMRSARS----LRENSTSQFRSIQDFIPHALTQYKTYENAFFSKVTDELI 111

Query: 110 VAASHPLISCGVATGLGFLVFKKPRNFLYYKTVRLFVNEESLLSKADAKVKELRQSIDRI 169
            A  HP  + G+      ++ + PR FL+  T+  F +EE+   KA+  V+EL  S+D +
Sbjct: 112 YAKEHPAAAIGIGVAASLVLMRGPRRFLFRNTLGRFQSEEAQFLKAEKHVQELNMSVDLM 171

Query: 170 KVESERLEKRTLQAQEELIRGRTKLRQAGKQIEGVIQSAYKIERKARGIQMGSLAMLKLK 229
           K ES +L +RT  A++++ RG ++L  +G  I  + +S +K E +A            L 
Sbjct: 172 KKESRKLLERTALAEKDMKRGLSELMNSGNDIHRLAKSVHKAECEA----------ADLM 231

Query: 230 DGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV 280
           DGL+ I    P R+A + R +V+++ S  +++RI L+K +  +S+ G+SV
Sbjct: 232 DGLRQI----PGRDAIKLRAEVASMTSLLRQKRIALNKRIMGMSDLGVSV 263

The following BLAST results are available for this feature:

BLAST of Lsi09G016330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84K90	3.0e-23	30.43	RGS1-HXK1-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=RHIP1 PE=1 SV...	[more]

BLAST of Lsi09G016330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CAD0	1.6e-128	91.76	uncharacterized protein LOC103498769 OS=Cucumis melo OX=3656 GN=LOC103498769 PE=...	[more]
A0A5D3DNB0	2.3e-127	91.70	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1L5I2	2.0e-118	86.02	uncharacterized protein LOC111499304 OS=Cucurbita maxima OX=3661 GN=LOC111499304...	[more]
A0A6J1H5U3	5.7e-118	86.02	uncharacterized protein LOC111460300 OS=Cucurbita moschata OX=3662 GN=LOC1114603...	[more]
A0A6J1DXH1	2.6e-110	82.08	uncharacterized protein LOC111024998 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of Lsi09G016330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459726.1	3.3e-128	91.76	PREDICTED: uncharacterized protein LOC103498769 [Cucumis melo]	[more]
XP_011656867.1	4.8e-127	90.32	RGS1-HXK1-interacting protein 1 isoform X1 [Cucumis sativus] >KGN46566.2 hypothe...	[more]
TYK24760.1	4.8e-127	91.70	uncharacterized protein E5676_scaffold266G003230 [Cucumis melo var. makuwa]	[more]
XP_011656868.1	1.3e-124	89.96	RGS1-HXK1-interacting protein 1 isoform X2 [Cucumis sativus]	[more]
XP_038875078.1	2.9e-124	89.61	LOW QUALITY PROTEIN: RGS1-HXK1-interacting protein 1 [Benincasa hispida]	[more]

BLAST of Lsi09G016330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45060.1	4.4e-70	54.04	Uncharacterised conserved protein UCP022280	[more]
AT4G26410.1	2.1e-24	30.43	Uncharacterised conserved protein UCP022280	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 152..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR34554	RGS1-HXK1-INTERACTING PROTEIN 1	coord: 3..279
None	No IPR available	PANTHER	PTHR34554:SF1	ALANINE-TRNA LIGASE	coord: 3..279

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G016330.1	Lsi09G016330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane