Lsi09G016270 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G016270
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Location	chr09: 24485031 .. 24485426 (-)
RNA-Seq Expression	Lsi09G016270
Synteny	Lsi09G016270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCTTCAAATTCTTAAGGTATTGGCTCTTGTGGTCTTGTTCAACATCCTAGCTTTAGCTTGTGTTTCATCTGCCAAACCGGGTTGCTCCCCGAAGATTCGGTCATCGCCTGCTACCACCCCAACAACGCAGGCGAAGTGCCCGAAAGATACACTGAAGTTTGGGGTTTGTGGAAGCTGGCTCGGGCTGATATCCGAGCAGATTGGGGCGAAACCGAGCAAGAAATGTTGTAGTTTGTTGACGGGGTTGGCCGATCTGGAGGCTGCATTGTGCTTGTGCACCGCGCTGAAAGCGAATGTGTTGGGTGTTGTTAGCCTTGATGTGCCTATTGCTCTTAGTTTGGTTGTAAATTCATGTGGAAAAAGTATTCCACAAGGCTTTGTTTGTCCTTAA

mRNA sequence

ATGGGGCTTCAAATTCTTAAGGTATTGGCTCTTGTGGTCTTGTTCAACATCCTAGCTTTAGCTTGTGTTTCATCTGCCAAACCGGGTTGCTCCCCGAAGATTCGGTCATCGCCTGCTACCACCCCAACAACGCAGGCGAAGTGCCCGAAAGATACACTGAAGTTTGGGGTTTGTGGAAGCTGGCTCGGGCTGATATCCGAGCAGATTGGGGCGAAACCGAGCAAGAAATGTTGTAGTTTGTTGACGGGGTTGGCCGATCTGGAGGCTGCATTGTGCTTGTGCACCGCGCTGAAAGCGAATGTGTTGGGTGTTGTTAGCCTTGATGTGCCTATTGCTCTTAGTTTGGTTGTAAATTCATGTGGAAAAAGTATTCCACAAGGCTTTGTTTGTCCTTAA

Coding sequence (CDS)

ATGGGGCTTCAAATTCTTAAGGTATTGGCTCTTGTGGTCTTGTTCAACATCCTAGCTTTAGCTTGTGTTTCATCTGCCAAACCGGGTTGCTCCCCGAAGATTCGGTCATCGCCTGCTACCACCCCAACAACGCAGGCGAAGTGCCCGAAAGATACACTGAAGTTTGGGGTTTGTGGAAGCTGGCTCGGGCTGATATCCGAGCAGATTGGGGCGAAACCGAGCAAGAAATGTTGTAGTTTGTTGACGGGGTTGGCCGATCTGGAGGCTGCATTGTGCTTGTGCACCGCGCTGAAAGCGAATGTGTTGGGTGTTGTTAGCCTTGATGTGCCTATTGCTCTTAGTTTGGTTGTAAATTCATGTGGAAAAAGTATTCCACAAGGCTTTGTTTGTCCTTAA

Protein sequence

MGLQILKVLALVVLFNILALACVSSAKPGCSPKIRSSPATTPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKSIPQGFVCP

Homology

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BLAST of Lsi09G016270 vs. ExPASy Swiss-Prot
Match: Q8RW93 (Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana OX=3702 GN=At4g00165 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 7.0e-31
Identity = 71/131 (54.20%), Postives = 94/131 (71.76%), Query Frame = 0


Query: 1   MGL-QILKVLALVVLFNILALACVSSAKPGCSPKIRSSPATTPTTQAKCPKDTLKFGVCG 60
           MG+ + L+ L +++L NI          PG + K    P     T  KCP+DTLKFGVCG
Sbjct: 1   MGISKALRSLLILLLLNITFF--FGHVTPGATVKPCPPPPAKQAT-TKCPRDTLKFGVCG 60

Query: 61  SWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNS 120
           SWLGL+SE IG  PS++CCSL+ GLAD EAA+CLCTALK ++LGV  + +P+AL+L++NS
Sbjct: 61  SWLGLVSEVIGTPPSQECCSLIKGLADFEAAVCLCTALKTSILGVAPVKIPVALTLLLNS 120

Query: 121 CGKSIPQGFVC 131
           CGK++PQGFVC
Sbjct: 121 CGKNVPQGFVC 128

[Close]

BLAST of Lsi09G016270 vs. ExPASy Swiss-Prot
Match: P14009 (14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-23
Identity = 68/137 (49.64%), Postives = 89/137 (64.96%), Query Frame = 0


Query: 1   MGLQILKVLALVVLFNILALACVSSAK---PGCSPKIRSSPATTPT---TQAKCPKDTLK 60
           MG +    +AL    NIL  A VSS +       PK + +P  TPT   +  KCP+D LK
Sbjct: 1   MGSKNSASVALFFTLNILFFALVSSTEKCPDPYKPKPKPTPKPTPTPYPSAGKCPRDALK 60

Query: 61  FGVCGSWLGLI-SEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIAL 120
            GVC   L L+ +  IG+ P+  CCSLL GL +LEAA+CLCTA+KAN+LG  +L++PIAL
Sbjct: 61  LGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILG-KNLNLPIAL 120

Query: 121 SLVVNSCGKSIPQGFVC 131
           SLV+N+CGK +P GF C
Sbjct: 121 SLVLNNCGKQVPNGFEC 136

[Close]

BLAST of Lsi09G016270 vs. ExPASy Swiss-Prot
Match: Q01595 (Cortical cell-delineating protein OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 6.6e-21
Identity = 54/127 (42.52%), Postives = 80/127 (62.99%), Query Frame = 0


Query: 9   LALVVLFNILALACVSSAKPGCSPKIRSSPATTPT----TQAKCPKDTLKFGVCGSWLGL 68
           +AL +  ++L  A     +P CS  +  +P   PT    +  +CP D LK  VC   LGL
Sbjct: 5   VALFLALSLLFAATAHGCEPNCSGPVVPTPPVVPTPSSHSHGRCPIDALKLKVCAKVLGL 64

Query: 69  ISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKSI 128
           +  ++G    ++CC LL GL DL+AALCLCTA+KANVLG + L+VP++L+ ++N+CG+  
Sbjct: 65  V--KVGLPQYEQCCPLLEGLVDLDAALCLCTAIKANVLG-IHLNVPLSLNFILNNCGRIC 124

Query: 129 PQGFVCP 132
           P+ F CP
Sbjct: 125 PEDFTCP 128

[Close]

BLAST of Lsi09G016270 vs. ExPASy Swiss-Prot
Match: Q39176 (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.3e-20
Identity = 47/95 (49.47%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 37  SPATTPTTQAKCPKDTLKFGVCGSWL-GLISEQIGAKPSKKCCSLLTGLADLEAALCLCT 96
           +P  TP +   CP D L+ GVC + L  L++ Q+G   ++ CCSL+ GL DL+AA+CLCT
Sbjct: 74  TPPRTPGSSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCT 133

Query: 97  ALKANVLGVVSLDVPIALSLVVNSCGKSIPQGFVC 131
           AL+ANVLG ++L+VPI+LS+++N C + +P GF C
Sbjct: 134 ALRANVLG-INLNVPISLSVLLNVCNRKVPSGFQC 167

[Close]

BLAST of Lsi09G016270 vs. ExPASy Swiss-Prot
Match: Q9S7I2 (Putative lipid-binding protein AIR1 OS=Arabidopsis thaliana OX=3702 GN=AIR1 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.5e-20
Identity = 43/90 (47.78%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 41  TPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN 100
           T  T   CPK++++ G C + L L+   +G  P K CCSL+ GLADLEAA+CLCTA+KA+
Sbjct: 21  TSATTGTCPKNSIEIGTCVTVLNLVDLTLGNPPVKPCCSLIQGLADLEAAVCLCTAVKAS 80

Query: 101 VLGVVSLDVPIALSLVVNSCGKSIPQGFVC 131
           +LG+V++++PI LS+++N C ++ P+ F C
Sbjct: 81  ILGIVNINLPINLSVLLNVCSRNAPKSFQC 110

[Close]

BLAST of Lsi09G016270 vs. ExPASy TrEMBL
Match: A0A0A0KCL7 (Proline-rich protein DC2.15 OS=Cucumis sativus OX=3659 GN=Csa_6G109650 PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 9.1e-58
Identity = 119/131 (90.84%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MGLQILKVLALVVLFNILALACVSSAKPGCSPKIRSSPATTPTTQAKCPKDTLKFGVCGS 60
           M L+ +KVLALVVL NI+ALACVSS KP C PK+R SPATTP TQAKCPKDTLKFGVCGS
Sbjct: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGFVCP
Sbjct: 121 GKSIPQGFVCP 131

[Close]

BLAST of Lsi09G016270 vs. ExPASy TrEMBL
Match: A0A5D3CR05 (Putative lipid-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold268G00020 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.2e-57
Identity = 118/129 (91.47%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 3   LQILKVLALVVLFNILALACVSSAKPGCSPKIRSSPATTPTTQAKCPKDTLKFGVCGSWL 62
           L+ +K+LALVVL NI+ALACVSSAKP C PK+R SPATTPTTQAKCPKDTLKFGVCGSWL
Sbjct: 4   LKFVKLLALVVLLNIIALACVSSAKPSCPPKVRPSPATTPTTQAKCPKDTLKFGVCGSWL 63

Query: 63  GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGK 122
           GLISEQIG KPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGK
Sbjct: 64  GLISEQIGTKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGK 123

Query: 123 SIPQGFVCP 132
           SIPQGFVCP
Sbjct: 124 SIPQGFVCP 132

[Close]

BLAST of Lsi09G016270 vs. ExPASy TrEMBL
Match: A0A1S3C8D8 (putative lipid-binding protein At4g00165 OS=Cucumis melo OX=3656 GN=LOC103497659 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.2e-57
Identity = 118/129 (91.47%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 3   LQILKVLALVVLFNILALACVSSAKPGCSPKIRSSPATTPTTQAKCPKDTLKFGVCGSWL 62
           L+ +K+LALVVL NI+ALACVSSAKP C PK+R SPATTPTTQAKCPKDTLKFGVCGSWL
Sbjct: 4   LKFVKLLALVVLLNIIALACVSSAKPSCPPKVRPSPATTPTTQAKCPKDTLKFGVCGSWL 63

Query: 63  GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGK 122
           GLISEQIG KPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGK
Sbjct: 64  GLISEQIGTKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGK 123

Query: 123 SIPQGFVCP 132
           SIPQGFVCP
Sbjct: 124 SIPQGFVCP 132

[Close]

BLAST of Lsi09G016270 vs. ExPASy TrEMBL
Match: A0A6J1KLJ3 (putative lipid-binding protein At4g00165 OS=Cucurbita maxima OX=3661 GN=LOC111494374 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 5.0e-56
Identity = 114/131 (87.02%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MGLQILKVLALVVLFNILALACVSSAKPGCSPKIRSSPATTPTTQAKCPKDTLKFGVCGS 60
           MGL+I K LALV L N++ALACVSSAKPGCSPK++ SPATTPT +AKCPKDTLK GVCGS
Sbjct: 1   MGLRIPKALALVALLNVIALACVSSAKPGCSPKVQPSPATTPTAKAKCPKDTLKLGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCC+LL GLADLEAALCLCTALKANVLGVV++DVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGFVCP
Sbjct: 121 GKSIPQGFVCP 131

[Close]

BLAST of Lsi09G016270 vs. ExPASy TrEMBL
Match: A0A6J1HKT0 (putative lipid-binding protein At4g00165 OS=Cucurbita moschata OX=3662 GN=LOC111464453 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.5e-55
Identity = 113/131 (86.26%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MGLQILKVLALVVLFNILALACVSSAKPGCSPKIRSSPATTPTTQAKCPKDTLKFGVCGS 60
           MGL+I K LALV L NI+ALACVSSAKPGCSPK++ SPATTP  +AKCPKDTLK GVCGS
Sbjct: 1   MGLRIPKALALVALLNIIALACVSSAKPGCSPKVQPSPATTPIAKAKCPKDTLKLGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCC+LL GLADLEAALCLCTALKANVLGVV++DVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGF CP
Sbjct: 121 GKSIPQGFACP 131

[Close]

BLAST of Lsi09G016270 vs. NCBI nr
Match: XP_038875568.1 (putative lipid-binding protein At4g00165 [Benincasa hispida])

HSP 1 Score: 235.7 bits (600), Expect = 2.2e-58
Identity = 122/131 (93.13%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MGLQILKVLALVVLFNILALACVSSAKPGCSPKIRSSPATTPTTQAKCPKDTLKFGVCGS 60
           MGL+ILK LAL+VL NILALACVSSAKPGC PK+RSSPATTPT QAKCPKDTLKFGVCGS
Sbjct: 1   MGLKILKALALIVLLNILALACVSSAKPGCPPKVRSSPATTPTMQAKCPKDTLKFGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLG V+LDVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLG-VNLDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGFVCP
Sbjct: 121 GKSIPQGFVCP 130

[Close]

BLAST of Lsi09G016270 vs. NCBI nr
Match: XP_004140487.1 (putative lipid-binding protein At4g00165 [Cucumis sativus] >KGN46569.1 hypothetical protein Csa_005129 [Cucumis sativus])

HSP 1 Score: 232.6 bits (592), Expect = 1.9e-57
Identity = 119/131 (90.84%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MGLQILKVLALVVLFNILALACVSSAKPGCSPKIRSSPATTPTTQAKCPKDTLKFGVCGS 60
           M L+ +KVLALVVL NI+ALACVSS KP C PK+R SPATTP TQAKCPKDTLKFGVCGS
Sbjct: 1   MELKFVKVLALVVLLNIIALACVSSVKPSCPPKVRPSPATTPATQAKCPKDTLKFGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGFVCP
Sbjct: 121 GKSIPQGFVCP 131

[Close]

BLAST of Lsi09G016270 vs. NCBI nr
Match: XP_008458132.1 (PREDICTED: putative lipid-binding protein At4g00165 [Cucumis melo] >TYK14005.1 putative lipid-binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 232.3 bits (591), Expect = 2.5e-57
Identity = 118/129 (91.47%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 3   LQILKVLALVVLFNILALACVSSAKPGCSPKIRSSPATTPTTQAKCPKDTLKFGVCGSWL 62
           L+ +K+LALVVL NI+ALACVSSAKP C PK+R SPATTPTTQAKCPKDTLKFGVCGSWL
Sbjct: 4   LKFVKLLALVVLLNIIALACVSSAKPSCPPKVRPSPATTPTTQAKCPKDTLKFGVCGSWL 63

Query: 63  GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGK 122
           GLISEQIG KPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGK
Sbjct: 64  GLISEQIGTKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGK 123

Query: 123 SIPQGFVCP 132
           SIPQGFVCP
Sbjct: 124 SIPQGFVCP 132

[Close]

BLAST of Lsi09G016270 vs. NCBI nr
Match: XP_023000073.1 (putative lipid-binding protein At4g00165 [Cucurbita maxima])

HSP 1 Score: 226.9 bits (577), Expect = 1.0e-55
Identity = 114/131 (87.02%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MGLQILKVLALVVLFNILALACVSSAKPGCSPKIRSSPATTPTTQAKCPKDTLKFGVCGS 60
           MGL+I K LALV L N++ALACVSSAKPGCSPK++ SPATTPT +AKCPKDTLK GVCGS
Sbjct: 1   MGLRIPKALALVALLNVIALACVSSAKPGCSPKVQPSPATTPTAKAKCPKDTLKLGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCC+LL GLADLEAALCLCTALKANVLGVV++DVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGFVCP
Sbjct: 121 GKSIPQGFVCP 131

[Close]

BLAST of Lsi09G016270 vs. NCBI nr
Match: XP_023514898.1 (putative lipid-binding protein At4g00165 [Cucurbita pepo subsp. pepo] >KAG6593611.1 putative lipid-binding protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025958.1 putative lipid-binding protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 224.9 bits (572), Expect = 3.9e-55
Identity = 114/131 (87.02%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MGLQILKVLALVVLFNILALACVSSAKPGCSPKIRSSPATTPTTQAKCPKDTLKFGVCGS 60
           MGL+I K LALV L NI+ALACVSSAKPGCSPK++ SPATTP  +AKCPKDTLK GVCGS
Sbjct: 1   MGLRIPKALALVALLNIIALACVSSAKPGCSPKVQPSPATTPIAKAKCPKDTLKLGVCGS 60

Query: 61  WLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC 120
           WLGLISEQIGAKPSKKCC+LL GLADLEAALCLCTALKANVLGVV++DVPIALSLVVNSC
Sbjct: 61  WLGLISEQIGAKPSKKCCTLLKGLADLEAALCLCTALKANVLGVVTVDVPIALSLVVNSC 120

Query: 121 GKSIPQGFVCP 132
           GKSIPQGFVCP
Sbjct: 121 GKSIPQGFVCP 131

[Close]

BLAST of Lsi09G016270 vs. TAIR 10
Match: AT4G00165.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 5.0e-32
Identity = 71/131 (54.20%), Postives = 94/131 (71.76%), Query Frame = 0


Query: 1   MGL-QILKVLALVVLFNILALACVSSAKPGCSPKIRSSPATTPTTQAKCPKDTLKFGVCG 60
           MG+ + L+ L +++L NI          PG + K    P     T  KCP+DTLKFGVCG
Sbjct: 1   MGISKALRSLLILLLLNITFF--FGHVTPGATVKPCPPPPAKQAT-TKCPRDTLKFGVCG 60

Query: 61  SWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNS 120
           SWLGL+SE IG  PS++CCSL+ GLAD EAA+CLCTALK ++LGV  + +P+AL+L++NS
Sbjct: 61  SWLGLVSEVIGTPPSQECCSLIKGLADFEAAVCLCTALKTSILGVAPVKIPVALTLLLNS 120

Query: 121 CGKSIPQGFVC 131
           CGK++PQGFVC
Sbjct: 121 CGKNVPQGFVC 128

[Close]

BLAST of Lsi09G016270 vs. TAIR 10
Match: AT4G00165.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 5.0e-32
Identity = 71/131 (54.20%), Postives = 94/131 (71.76%), Query Frame = 0


Query: 1   MGL-QILKVLALVVLFNILALACVSSAKPGCSPKIRSSPATTPTTQAKCPKDTLKFGVCG 60
           MG+ + L+ L +++L NI          PG + K    P     T  KCP+DTLKFGVCG
Sbjct: 1   MGISKALRSLLILLLLNITFF--FGHVTPGATVKPCPPPPAKQAT-TKCPRDTLKFGVCG 60

Query: 61  SWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNS 120
           SWLGL+SE IG  PS++CCSL+ GLAD EAA+CLCTALK ++LGV  + +P+AL+L++NS
Sbjct: 61  SWLGLVSEVIGTPPSQECCSLIKGLADFEAAVCLCTALKTSILGVAPVKIPVALTLLLNS 120

Query: 121 CGKSIPQGFVC 131
           CGK++PQGFVC
Sbjct: 121 CGKNVPQGFVC 128

[Close]

BLAST of Lsi09G016270 vs. TAIR 10
Match: AT2G45180.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 118.6 bits (296), Expect = 3.7e-27
Identity = 67/134 (50.00%), Postives = 88/134 (65.67%), Query Frame = 0


Query: 1   MGLQILKVLALVVLFNILALACVSSAK-PGCS---PKIRSSPATTPTTQAKCPKDTLKFG 60
           M  + L V AL++  N+L    V+S K P  +   PK   SP   P  +  CP DTLK G
Sbjct: 1   MASKALAVTALLITLNLLFFTFVTSTKCPPTTPKPPKTPKSPKKAPAVKPTCPTDTLKLG 60

Query: 61  VCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLV 120
           VC   LGL++  +G+ P   CC+LL GLA+LEAA+CLCTALKANVLG ++L+VPI L+L+
Sbjct: 61  VCADLLGLVNVVVGSPPKTPCCTLLQGLANLEAAVCLCTALKANVLG-INLNVPIDLTLL 120

Query: 121 VNSCGKSIPQGFVC 131
           +N CGK +P GF C
Sbjct: 121 LNYCGKKVPHGFQC 133

[Close]

BLAST of Lsi09G016270 vs. TAIR 10
Match: AT4G12520.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-26
Identity = 66/131 (50.38%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 1   MGLQILKVLALVVLFNILALACVSSAKPGCSPKIRSSPATTPTTQAKCPKDTLKFGVCGS 60
           M  +I   L + + FNIL     ++   GCS   +  P   P +   CPKDTLK GVC +
Sbjct: 1   MASKISASLVIFLTFNILFFTLTTACGGGCSSTPKPKP--KPKSTGSCPKDTLKLGVCAN 60

Query: 61  WL-GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNS 120
            L  L+  Q+G  P K CCSLL GL DLEAA CLCTALKA VLG ++L+VP++LSL++N 
Sbjct: 61  VLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLG-INLNVPVSLSLLLNV 120

Query: 121 CGKSIPQGFVC 131
           CGK +P GFVC
Sbjct: 121 CGKKVPSGFVC 128

[Close]

BLAST of Lsi09G016270 vs. TAIR 10
Match: AT4G12510.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-26
Identity = 66/131 (50.38%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 1   MGLQILKVLALVVLFNILALACVSSAKPGCSPKIRSSPATTPTTQAKCPKDTLKFGVCGS 60
           M  +I   L + + FNIL     ++   GCS   +  P   P +   CPKDTLK GVC +
Sbjct: 1   MASKISASLVIFLTFNILFFTLTTACGGGCSSTPKPKP--KPKSTGSCPKDTLKLGVCAN 60

Query: 61  WL-GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNS 120
            L  L+  Q+G  P K CCSLL GL DLEAA CLCTALKA VLG ++L+VP++LSL++N 
Sbjct: 61  VLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLG-INLNVPVSLSLLLNV 120

Query: 121 CGKSIPQGFVC 131
           CGK +P GFVC
Sbjct: 121 CGKKVPSGFVC 128

The following BLAST results are available for this feature:

BLAST of Lsi09G016270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RW93	7.0e-31	54.20	Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana OX=3702 GN=At4g...	[more]
P14009	1.4e-23	49.64	14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1	[more]
Q01595	6.6e-21	42.52	Cortical cell-delineating protein OS=Zea mays OX=4577 PE=2 SV=1	[more]
Q39176	7.3e-20	49.47	Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV...	[more]
Q9S7I2	9.5e-20	47.78	Putative lipid-binding protein AIR1 OS=Arabidopsis thaliana OX=3702 GN=AIR1 PE=2...	[more]

BLAST of Lsi09G016270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCL7	9.1e-58	90.84	Proline-rich protein DC2.15 OS=Cucumis sativus OX=3659 GN=Csa_6G109650 PE=3 SV=1	[more]
A0A5D3CR05	1.2e-57	91.47	Putative lipid-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C8D8	1.2e-57	91.47	putative lipid-binding protein At4g00165 OS=Cucumis melo OX=3656 GN=LOC103497659...	[more]
A0A6J1KLJ3	5.0e-56	87.02	putative lipid-binding protein At4g00165 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1HKT0	5.5e-55	86.26	putative lipid-binding protein At4g00165 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Lsi09G016270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875568.1	2.2e-58	93.13	putative lipid-binding protein At4g00165 [Benincasa hispida]	[more]
XP_004140487.1	1.9e-57	90.84	putative lipid-binding protein At4g00165 [Cucumis sativus] >KGN46569.1 hypotheti...	[more]
XP_008458132.1	2.5e-57	91.47	PREDICTED: putative lipid-binding protein At4g00165 [Cucumis melo] >TYK14005.1 p...	[more]
XP_023000073.1	1.0e-55	87.02	putative lipid-binding protein At4g00165 [Cucurbita maxima]	[more]
XP_023514898.1	3.9e-55	87.02	putative lipid-binding protein At4g00165 [Cucurbita pepo subsp. pepo] >KAG659361...	[more]

BLAST of Lsi09G016270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00165.1	5.0e-32	54.20	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G00165.2	5.0e-32	54.20	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G45180.1	3.7e-27	50.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G12520.1	1.8e-26	50.38	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G12510.1	1.8e-26	50.38	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 48..130 e-value: 1.9E-5 score: 34.1
IPR027923	Hydrophobic seed protein domain	PFAM	PF14547	Hydrophob_seed	coord: 47..131 e-value: 1.3E-25 score: 89.4
IPR027923	Hydrophobic seed protein domain	CDD	cd01958	HPS_like	coord: 46..130 e-value: 6.80578E-28 score: 96.2436
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 41..131 e-value: 1.6E-25 score: 90.7
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 51..131
None	No IPR available	PANTHER	PTHR31731:SF28	PROLINE-RICH PROTEIN DC2.15	coord: 3..130
None	No IPR available	PANTHER	PTHR31731	FAMILY NOT NAMED	coord: 3..130
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..22 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G016270.1	Lsi09G016270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008289	lipid binding