Homology
BLAST of Lsi09G013620 vs. ExPASy Swiss-Prot
Match:
P0C8Q8 (Pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E42 PE=2 SV=1)
HSP 1 Score: 775.8 bits (2002), Expect = 4.2e-223
Identity = 382/652 (58.59%), Postives = 495/652 (75.92%), Query Frame = 0
Query: 48 SSSCLDYELSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFS 107
S D E +LVSAL SCASS+ + G+QIH VLKSG +SN +I NS++NMY KC L +
Sbjct: 34 SGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLA 93
Query: 108 DARLLFDSCSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDC 167
DA +F + LDS S NIM+ GY++ R+L +A +LFD MPER CVSYTT+I G AQN+
Sbjct: 94 DAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQ 153
Query: 168 WREAIEVFKDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTN 227
W EA+E+F++MR+ G+ NEVT+A+V+SACSH+G IW+C ML +L IKL V +STN
Sbjct: 154 WSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTN 213
Query: 228 LLHMYCVCSSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISW 287
LLHMYC+C LKDAR+LF EMP RN V+WNVML GY K+GL++QA ELF++I E+D++SW
Sbjct: 214 LLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSW 273
Query: 288 ATMIDGFVQMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVK 347
TMIDG ++ +L EAL+ Y+ M + + P+EVM+VDLLSA +SV +G Q H +VK
Sbjct: 274 GTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVK 333
Query: 348 NGFVCYDFIQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKI 407
GF CYDF+QAT I FYA I LA Q++ S K H+ S NALI GF KN M++QAR++
Sbjct: 334 RGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREV 393
Query: 408 FDVMPEKDVFSWSTMISGYAQNELPDMALELFHGMV-VSDVEPNEITMVSVFSAIAALGK 467
FD +KD+FSW+ MISGYAQ+ P +AL LF M+ S V+P+ ITMVSVFSAI++LG
Sbjct: 394 FDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGS 453
Query: 468 LPEGRWAHEYVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRD-KASTVSPWNAI 527
L EG+ AH+Y+ IP NDNL+AAIIDMYAKCGSI TAL++FHQ ++ +ST+SPWNAI
Sbjct: 454 LEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAI 513
Query: 528 ICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYG 587
ICG A HGHA L+L+++S+LQ IK NSITF+GVL ACCHAGLVELG+ YF SMK+ +G
Sbjct: 514 ICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHG 573
Query: 588 VEPNVKHYGCLVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAA 647
+EP++KHYGC+VDLLG+AGRL EA+ I+ MP+KADV+IWG LL+A RTHG VEI E AA
Sbjct: 574 IEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAA 633
Query: 648 ESLARLEPSHGPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
LA ++PSHG +V+LSN+YADAG WED +LVR M+++ + S +SGVV
Sbjct: 634 TELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGVV 685
BLAST of Lsi09G013620 vs. ExPASy Swiss-Prot
Match:
Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)
HSP 1 Score: 412.5 bits (1059), Expect = 9.3e-114
Identity = 224/637 (35.16%), Postives = 359/637 (56.36%), Query Frame = 0
Query: 63 KSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDSCSVLDSV 122
KS S+ F Q +H V+KSG + +++N+L+N+Y K G AR LFD + +
Sbjct: 22 KSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAF 81
Query: 123 SCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVFKDMRSAG 182
S N ++ Y K +++ + FD++P+R VS+TTMI+G + +AI V DM G
Sbjct: 82 SWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG 141
Query: 183 VAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVCSSLKDAR 242
+ P + T+ +V+++ + + +H+ ++KL V +S +LL+MY C A+
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 243 RLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFVQMKRLRE 302
+F M VR+ SWN M+ +++ G +D A FE++ ERD+++W +MI GF Q
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261
Query: 303 ALLMYSAM-RKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDFIQATFI 362
AL ++S M R S L P+ + +LSAC + G+Q H+ +V GF + I
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321
Query: 363 SFYAACGRIDLA--YLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKDVFSW 422
S Y+ CG ++ A ++ + + + AL+ G+ K ++QA+ IF + ++DV +W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 423 STMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCN 482
+ MI GY Q+ A+ LF MV PN T+ ++ S ++L L G+ H
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441
Query: 483 KAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHANLSL 542
+ ++S A+I MYAK G+I +A F IR + TVS W ++I LA HGHA +L
Sbjct: 442 SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVS-WTSMIIALAQHGHAEEAL 501
Query: 543 EIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGCLVDL 602
E+F + ++ + IT++GV AC HAGLV G +YF MK V + P + HY C+VDL
Sbjct: 502 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 561
Query: 603 LGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGPGR 662
GRAG L+EA+ I MP++ DVV WG+LL+ACR H +++G+ AAE L LEP +
Sbjct: 562 FGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAY 621
Query: 663 VLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGV 697
L+NLY+ G WE+A+ +R++M+ R+ + G+S +
Sbjct: 622 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
BLAST of Lsi09G013620 vs. ExPASy Swiss-Prot
Match:
Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)
HSP 1 Score: 394.8 bits (1013), Expect = 2.0e-108
Identity = 240/666 (36.04%), Postives = 348/666 (52.25%), Query Frame = 0
Query: 38 NLSSFLNGRPSSSCLDYELSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLI 97
+LSSF + P + LD S +KS SAI+ + +H V+KSGF++ FI N LI
Sbjct: 12 DLSSFTDSSPFAKLLD------SCIKS--KLSAIYV-RYVHASVIKSGFSNEIFIQNRLI 71
Query: 98 NMYVKCGLFSDARLLFDSCSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTT 157
+ Y KCG D R +FD + + N ++ G KL L+ A LF MPER ++ +
Sbjct: 72 DAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNS 131
Query: 158 MILGLAQNDCWREAIEVFKDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLH 217
M+ G AQ+D EA+ F M G NE + ASV+SACS + D+ +H+L+ K
Sbjct: 132 MVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSP 191
Query: 218 FFDLVLISTNLLHMYCVCSSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFE 277
F V I + L+ MY C ++ DA+R+F EM RN VSWN
Sbjct: 192 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWN-------------------- 251
Query: 278 RIPERDVISWATMIDGFVQMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDE 337
++I F Q EAL ++ M +S + P+EV + ++SAC +I
Sbjct: 252 -----------SLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKV 311
Query: 338 GRQFHALVVKNGFVCYDFIQA-TFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFT 397
G++ H VVKN + D I + F+ YA C RI A + ++I+ ++I G+
Sbjct: 312 GQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYA 371
Query: 398 KNRMIDQARKIFDVMPEKDVFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVS 457
AR +F M E++V SW+ +I+GY QN + AL LF + V P + +
Sbjct: 372 MAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 431
Query: 458 VFSAIAALGKLPEGRWAHEYVCNKAIPLNDN------LSAAIIDMYAKCGSINTALDVFH 517
+ A A L +L G AH +V + ++IDMY KCG + VF
Sbjct: 432 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 491
Query: 518 QIRDKASTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLV 577
++ ++ WNA+I G A +G+ N +LE+F + K + IT +GVL AC HAG V
Sbjct: 492 KMMERDCV--SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFV 551
Query: 578 ELGERYFWSMKTVYGVEPNVKHYGCLVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLA 637
E G YF SM +GV P HY C+VDLLGRAG L EA+ I MPM+ D VIWG+LLA
Sbjct: 552 EEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLA 611
Query: 638 ACRTHGEVEIGERAAESLARLEPSHGPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRS 697
AC+ H + +G+ AE L +EPS+ VLLSN+YA+ G WED VR++M+ + + +
Sbjct: 612 ACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQ 635
BLAST of Lsi09G013620 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 382.1 bits (980), Expect = 1.3e-104
Identity = 214/637 (33.59%), Postives = 342/637 (53.69%), Query Frame = 0
Query: 62 LKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDSCSVLDS 121
L +CA S A G QIH +++K G+ + F+ NSL++ Y +CG
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG----------------- 200
Query: 122 VSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEV-FKDMRS 181
+L++AR++FD+M ER VS+T+MI G A+ D ++A+++ F+ +R
Sbjct: 201 --------------ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 260
Query: 182 AGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVCSSLKD 241
V PN VTM V+SAC+ + D+ ++A + L+ + L+ MY C+++
Sbjct: 261 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 320
Query: 242 ARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFVQMKRL 301
A+RLF E N N M YV+ GL
Sbjct: 321 AKRLFDEYGASNLDLCNAMASNYVRQGL-------------------------------T 380
Query: 302 REALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDFIQATF 361
REAL +++ M S + P+ + ++ +S+C Q +I G+ H V++NGF +D I
Sbjct: 381 REALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 440
Query: 362 ISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKDVFSWS 421
I Y C R D A+ + +++ N+++ G+ +N +D A + F+ MPEK++ SW+
Sbjct: 441 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 500
Query: 422 TMISGYAQNELPDMALELFHGMVVSD-VEPNEITMVSVFSAIAALGKLPEGRWAHEYVCN 481
T+ISG Q L + A+E+F M + V + +TM+S+ SA LG L +W + Y+
Sbjct: 501 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 560
Query: 482 KAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHANLSL 541
I L+ L ++DM+++CG +A+ +F+ + ++ VS W A I +AM G+A ++
Sbjct: 561 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR--DVSAWTAAIGAMAMAGNAERAI 620
Query: 542 EIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGCLVDL 601
E+F ++ + +K + + F+G L AC H GLV+ G+ F+SM ++GV P HYGC+VDL
Sbjct: 621 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 680
Query: 602 LGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGPGR 661
LGRAG L EA I MPM+ + VIW +LLAACR G VE+ AAE + L P
Sbjct: 681 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 713
Query: 662 VLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGV 697
VLLSN+YA AG W D + VR +M+ + + + PG S +
Sbjct: 741 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
BLAST of Lsi09G013620 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 377.1 bits (967), Expect = 4.3e-103
Identity = 203/562 (36.12%), Postives = 312/562 (55.52%), Query Frame = 0
Query: 137 LENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVFKDMRSAGVAPNEVTMASVMSA 196
L A +F + E + + TM G A + A++++ M S G+ PN T V+ +
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 197 CSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVCSSLKDARRLFSEMPVRNTVSW 256
C+ +H V+KL + + T+L+ MY L+DA ++F + P R+ VS+
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 257 NVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFVQMKRLREALLMYSAMRKSDLH 316
++KGY G ++ A++LF+ IP +DV+SW MI G+ + +EAL ++ M K+++
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 317 PNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDFIQATFISFYAACGRIDLAYLQ 376
P+E +V ++SAC QS SI+ GRQ H + +GF I I Y+ CG ++ A
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETAC-- 323
Query: 377 YQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKDVFSWSTMISGYAQNELPDMAL 436
+F+ +P KDV SW+T+I GY L AL
Sbjct: 324 -----------------------------GLFERLPYKDVISWNTLIGGYTHMNLYKEAL 383
Query: 437 ELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCN--KAIPLNDNLSAAIID 496
LF M+ S PN++TM+S+ A A LG + GRW H Y+ K + +L ++ID
Sbjct: 384 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 443
Query: 497 MYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNS 556
MYAKCG I A VF+ I K ++S WNA+I G AMHG A+ S ++FS +++ I+ +
Sbjct: 444 MYAKCGDIEAAHQVFNSILHK--SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDD 503
Query: 557 ITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGCLVDLLGRAGRLREAEGTIR 616
ITF+G+L AC H+G+++LG F +M Y + P ++HYGC++DLLG +G +EAE I
Sbjct: 504 ITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMIN 563
Query: 617 TMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGPGRVLLSNLYADAGLWED 676
M M+ D VIW +LL AC+ HG VE+GE AE+L ++EP + VLLSN+YA AG W +
Sbjct: 564 MMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNE 612
Query: 677 ASLVRRAMQSQRMIRSPGYSGV 697
+ R + + M + PG S +
Sbjct: 624 VAKTRALLNDKGMKKVPGCSSI 612
BLAST of Lsi09G013620 vs. ExPASy TrEMBL
Match:
A0A1S4E227 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497919 PE=4 SV=1)
HSP 1 Score: 1258.0 bits (3254), Expect = 0.0e+00
Identity = 626/703 (89.05%), Postives = 658/703 (93.60%), Query Frame = 0
Query: 1 MLVSSIPKIFPRCITI------PLYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDY 60
M+VSSIPK FPR I I PLYLKWVSTFS I SSP PLQNLS+FLNGRPSSS LD
Sbjct: 1 MVVSSIPKFFPRPIAIPLSFPPPLYLKWVSTFSKIESSPCPLQNLSTFLNGRPSSSSLDC 60
Query: 61 ELSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFD 120
ELS+VSALK CASSSAI GQQIH IVLK GFNSNTFILNSLINMYVKCGL S ARLLFD
Sbjct: 61 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 120
Query: 121 SCSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEV 180
SCSVLDSVSCNIM+ GYIKLRQLENARQLF KMPERGCVSYTTMILGLAQNDCW EAIEV
Sbjct: 121 SCSVLDSVSCNIMMSGYIKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180
Query: 181 FKDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCV 240
FKDMRSAGVAPNEVTMASVMSACSHIG IWNC MLHALVIKLHFF LVLISTNLLHMYCV
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCCMLHALVIKLHFFGLVLISTNLLHMYCV 240
Query: 241 CSSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGF 300
SSLKDA+RLF+EMPVRNTVSWNVMLKGYVKSGL+DQARELFERIPERDV SWATMIDGF
Sbjct: 241 FSSLKDAKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWATMIDGF 300
Query: 301 VQMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYD 360
VQMKRLREALL+YSAMRKSD HPNEV+IVDLLSACGQSVSIDEGRQFH+L+VKNGFVC+D
Sbjct: 301 VQMKRLREALLLYSAMRKSDFHPNEVLIVDLLSACGQSVSIDEGRQFHSLIVKNGFVCFD 360
Query: 361 FIQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEK 420
FIQ+T +SFYAACGRIDLAYLQYQ+SDKSHL SSN +IVGFTKN MIDQAR+IFD+MP K
Sbjct: 361 FIQSTIVSFYAACGRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPVK 420
Query: 421 DVFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAH 480
DVFSWSTMISGYAQNELPDMALELFH M+VS +EPNEITMVSVFSAIAALGKLPEGRW H
Sbjct: 421 DVFSWSTMISGYAQNELPDMALELFHAMIVSKIEPNEITMVSVFSAIAALGKLPEGRWTH 480
Query: 481 EYVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGH 540
EYV NKAIPLNDNLSAAIIDMYAKCGSI+TALDVFHQI+DK STVSPWNAIICGLAMHG
Sbjct: 481 EYVSNKAIPLNDNLSAAIIDMYAKCGSIDTALDVFHQIKDKTSTVSPWNAIICGLAMHGD 540
Query: 541 ANLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYG 600
ANLSLEIFSNLQ+R+IKLNSITFLGVLGACCHAGLVE+GERYFWSMKT +GVEPN+KHYG
Sbjct: 541 ANLSLEIFSNLQKRNIKLNSITFLGVLGACCHAGLVEVGERYFWSMKTQHGVEPNIKHYG 600
Query: 601 CLVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPS 660
CLVDLLGR GRLREAE +RTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPS
Sbjct: 601 CLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPS 660
Query: 661 HGPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
HGPGRVLLSNLYADAGLWEDA+LVRRAM+S+RMIRSPGYSGVV
Sbjct: 661 HGPGRVLLSNLYADAGLWEDAALVRRAMRSRRMIRSPGYSGVV 703
BLAST of Lsi09G013620 vs. ExPASy TrEMBL
Match:
A0A0A0KC16 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G239150 PE=4 SV=1)
HSP 1 Score: 1256.5 bits (3250), Expect = 0.0e+00
Identity = 626/703 (89.05%), Postives = 658/703 (93.60%), Query Frame = 0
Query: 1 MLVSSIPKIFPRCITI------PLYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDY 60
M+VSSIPK FPR I I PLYLKWVSTFSTI SSPRPLQNLSSFLNGRPSSS LD
Sbjct: 1 MVVSSIPKFFPRPIAIPLSFPPPLYLKWVSTFSTIESSPRPLQNLSSFLNGRPSSSSLDC 60
Query: 61 ELSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFD 120
ELS+VSALK CASSSAI GQQIH IVLK GFNSNTFILNSLINMYVKCGL S ARLLFD
Sbjct: 61 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 120
Query: 121 SCSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEV 180
SCSVLDSVSCNIM+ GY+KLRQLENARQLF KMPERGCVSYTTMILGLAQNDCW EAIEV
Sbjct: 121 SCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180
Query: 181 FKDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCV 240
FKDMRSAGVAPNEVTMASVMSACSHIG IWNC MLHALVIKLHFF LVLISTNLLHMYCV
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCV 240
Query: 241 CSSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGF 300
SSLKD +RLF+EMPVRNTVSWNVMLKGYVKSGL+DQARELFERIPERDV SWA MIDGF
Sbjct: 241 FSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGF 300
Query: 301 VQMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYD 360
VQMKRLR+ALL+YSAMRKSDLHPNEV+IVDLLSACGQSVSI+EGRQFH+L+VKNGFVC+D
Sbjct: 301 VQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFD 360
Query: 361 FIQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEK 420
FIQAT ISFYAAC RIDLAYLQYQ+SDKSHL SSN +IVGFTKN MIDQAR+IFD+MPEK
Sbjct: 361 FIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEK 420
Query: 421 DVFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAH 480
DVFSWSTMISGYAQNELPD+AL+LFHGM+ S VEPNEITMVSVFSAIAALGKLPEGRWAH
Sbjct: 421 DVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAH 480
Query: 481 EYVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGH 540
EYVCNK IPLNDNLSAAIIDMYAKCGSI+TALDVF QI+DK STVSPWNAIICGLAMHGH
Sbjct: 481 EYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGH 540
Query: 541 ANLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYG 600
ANLSLEIFSNLQRRSIKLNSITFLGVL ACCHAGLVE+GERYFWSMKT +GVEPN+KHYG
Sbjct: 541 ANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYG 600
Query: 601 CLVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPS 660
CLVDLLGR GRLREAE +RTMPMKADVVIWGTLLA+ RTHGEVEIGERAAE+LARL+PS
Sbjct: 601 CLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVEIGERAAENLARLQPS 660
Query: 661 HGPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
HGPGRVLLSNLYADAGLWEDA+LVRRA+QSQRMIRSPGYSGVV
Sbjct: 661 HGPGRVLLSNLYADAGLWEDAALVRRAIQSQRMIRSPGYSGVV 703
BLAST of Lsi09G013620 vs. ExPASy TrEMBL
Match:
A0A6J1H4P4 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111460125 PE=4 SV=1)
HSP 1 Score: 1245.3 bits (3221), Expect = 0.0e+00
Identity = 618/702 (88.03%), Postives = 656/702 (93.45%), Query Frame = 0
Query: 1 MLVSSIPKIFPRCITIP-----LYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDYE 60
M V +IPK+F R ITIP LY KWVSTFSTIG S RPL NL+SF NGRPS +CLDYE
Sbjct: 1 MPVFAIPKLFSRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60
Query: 61 LSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDS 120
LSLVSALK CASSSAIF GQQIH VLKSGF+SNTFILNSLINMY KCG +DARLLFDS
Sbjct: 61 LSLVSALKYCASSSAIFQGQQIHATVLKSGFDSNTFILNSLINMYAKCGHIADARLLFDS 120
Query: 121 CSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVF 180
CS LDSVSCNIM+ GY+KLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIE+F
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180
Query: 181 KDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVC 240
KDMRSAGVAPNEVT+ASVMSACSHIG IWNC MLHALVIKLHF LVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240
Query: 241 SSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFV 300
SSLKDARRLF+EMP+RNTVSWNVMLKGYVKSGL+D+A ELF+RIPERDVISWATMIDGFV
Sbjct: 241 SSLKDARRLFNEMPMRNTVSWNVMLKGYVKSGLVDKAIELFDRIPERDVISWATMIDGFV 300
Query: 301 QMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDF 360
Q+K+LREAL M+SAMRKSDLHPNEVMIVDLLSACGQS+SIDEGRQ H+++VK GF CYDF
Sbjct: 301 QVKQLREALSMFSAMRKSDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360
Query: 361 IQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKD 420
+QAT ISFY+ACGRI+LA LQYQVSDKSHL +SNALIVGF KNRMIDQAR+IFDVMP KD
Sbjct: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKD 420
Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAHE 480
VFSWSTMISGYAQNELPDMALELFHGMVVS +EPNEITMVSVFSAIAA GKL EGRWAHE
Sbjct: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480
Query: 481 YVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHA 540
YVCNKAIPLNDNLSAA+IDMYAKCGSI+TA+D+F+QIRDKASTVSPWNAIICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHA 540
Query: 541 NLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGC 600
NLSLEIFS+LQ RSIKLNSITFLGVLGACCHAGLVELGERYFWSMK+VYGVEPN+KHYGC
Sbjct: 541 NLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600
Query: 601 LVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSH 660
LVDLLGRA RLREAE TIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660
Query: 661 GPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
G GRVLLSNLYADAGLWEDASLVR+AMQSQRMIRSPG SGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702
BLAST of Lsi09G013620 vs. ExPASy TrEMBL
Match:
A0A6J1L1I9 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111499011 PE=4 SV=1)
HSP 1 Score: 1243.8 bits (3217), Expect = 0.0e+00
Identity = 617/702 (87.89%), Postives = 656/702 (93.45%), Query Frame = 0
Query: 1 MLVSSIPKIFPRCITI-----PLYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDYE 60
MLV +IPK+F R ITI PLY KWVS+FSTIG S RPL NL+SF NGRPS +CLDYE
Sbjct: 1 MLVFAIPKLFSRRITIPLSFTPLYPKWVSSFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60
Query: 61 LSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDS 120
LSLVSALKSCASSSAIF GQQIH VLKSGF+SNTFILNSLINMY KCG +DARLLFDS
Sbjct: 61 LSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTFILNSLINMYAKCGHIADARLLFDS 120
Query: 121 CSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVF 180
CS LDSVSCNIM+ GY+KLRQLENAR LFDKMPERGCVSYTTMILGLAQNDCWREAIE+F
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180
Query: 181 KDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVC 240
KDMRSAGVAPNEVT+ASVMSACSHIG IWNC MLHALVIKLHF LVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240
Query: 241 SSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFV 300
SSLKDARRLF+EMPVRNTVSWNVMLKGYVKSGL+D+A ELF+RIPE+DVISWATMIDGFV
Sbjct: 241 SSLKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV 300
Query: 301 QMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDF 360
Q+K+LREAL M+SAMRKSDLHPNEVMIVDLLSACGQS+SIDEGRQ H+++VK GF CYDF
Sbjct: 301 QVKQLREALSMFSAMRKSDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360
Query: 361 IQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKD 420
+QAT ISFY+ACGRI+LA LQYQVSDKSHL +SNALIVGF KNRMIDQAR+IFDVMPEKD
Sbjct: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPEKD 420
Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAHE 480
VFSWSTMISGYAQNELPD+ALELFHGMVV V NEITMVSVFSAIAA GKL EGRWAHE
Sbjct: 421 VFSWSTMISGYAQNELPDVALELFHGMVVRGVVANEITMVSVFSAIAASGKLAEGRWAHE 480
Query: 481 YVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHA 540
YVCNKAIPLNDNLSAA+IDMYAKCGSI+TA++VF+QIRDKASTVSPWNA+ICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMNVFYQIRDKASTVSPWNAVICGLAMHGHA 540
Query: 541 NLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGC 600
NLSLEIFS+LQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMK+VYGVEPN+KHYGC
Sbjct: 541 NLSLEIFSDLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600
Query: 601 LVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSH 660
LVDLLGRA RLREAE TIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660
Query: 661 GPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
G GRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPG SGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGVV 702
BLAST of Lsi09G013620 vs. ExPASy TrEMBL
Match:
A0A1S4E229 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497919 PE=4 SV=1)
HSP 1 Score: 1204.1 bits (3114), Expect = 0.0e+00
Identity = 605/703 (86.06%), Postives = 637/703 (90.61%), Query Frame = 0
Query: 1 MLVSSIPKIFPRCITI------PLYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDY 60
M+VSSIPK FPR I I PLYLKWVSTFS I SSP PLQNLS+FLNGRPSSS LD
Sbjct: 1 MVVSSIPKFFPRPIAIPLSFPPPLYLKWVSTFSKIESSPCPLQNLSTFLNGRPSSSSLDC 60
Query: 61 ELSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFD 120
ELS+VSALK CASSSAI GQQIH IVLK G ARLLFD
Sbjct: 61 ELSVVSALKYCASSSAISSGQQIHAIVLKYG-----------------------ARLLFD 120
Query: 121 SCSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEV 180
SCSVLDSVSCNIM+ GYIKLRQLENARQLF KMPERGCVSYTTMILGLAQNDCW EAIEV
Sbjct: 121 SCSVLDSVSCNIMMSGYIKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180
Query: 181 FKDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCV 240
FKDMRSAGVAPNEVTMASVMSACSHIG IWNC MLHALVIKLHFF LVLISTNLLHMYCV
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCCMLHALVIKLHFFGLVLISTNLLHMYCV 240
Query: 241 CSSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGF 300
SSLKDA+RLF+EMPVRNTVSWNVMLKGYVKSGL+DQARELFERIPERDV SWATMIDGF
Sbjct: 241 FSSLKDAKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWATMIDGF 300
Query: 301 VQMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYD 360
VQMKRLREALL+YSAMRKSD HPNEV+IVDLLSACGQSVSIDEGRQFH+L+VKNGFVC+D
Sbjct: 301 VQMKRLREALLLYSAMRKSDFHPNEVLIVDLLSACGQSVSIDEGRQFHSLIVKNGFVCFD 360
Query: 361 FIQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEK 420
FIQ+T +SFYAACGRIDLAYLQYQ+SDKSHL SSN +IVGFTKN MIDQAR+IFD+MP K
Sbjct: 361 FIQSTIVSFYAACGRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPVK 420
Query: 421 DVFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAH 480
DVFSWSTMISGYAQNELPDMALELFH M+VS +EPNEITMVSVFSAIAALGKLPEGRW H
Sbjct: 421 DVFSWSTMISGYAQNELPDMALELFHAMIVSKIEPNEITMVSVFSAIAALGKLPEGRWTH 480
Query: 481 EYVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGH 540
EYV NKAIPLNDNLSAAIIDMYAKCGSI+TALDVFHQI+DK STVSPWNAIICGLAMHG
Sbjct: 481 EYVSNKAIPLNDNLSAAIIDMYAKCGSIDTALDVFHQIKDKTSTVSPWNAIICGLAMHGD 540
Query: 541 ANLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYG 600
ANLSLEIFSNLQ+R+IKLNSITFLGVLGACCHAGLVE+GERYFWSMKT +GVEPN+KHYG
Sbjct: 541 ANLSLEIFSNLQKRNIKLNSITFLGVLGACCHAGLVEVGERYFWSMKTQHGVEPNIKHYG 600
Query: 601 CLVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPS 660
CLVDLLGR GRLREAE +RTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPS
Sbjct: 601 CLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPS 660
Query: 661 HGPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
HGPGRVLLSNLYADAGLWEDA+LVRRAM+S+RMIRSPGYSGVV
Sbjct: 661 HGPGRVLLSNLYADAGLWEDAALVRRAMRSRRMIRSPGYSGVV 680
BLAST of Lsi09G013620 vs. NCBI nr
Match:
XP_038876269.1 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Benincasa hispida])
HSP 1 Score: 1304.7 bits (3375), Expect = 0.0e+00
Identity = 648/698 (92.84%), Postives = 675/698 (96.70%), Query Frame = 0
Query: 1 MLVSSIPK-IFPRCITIPLYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDYELSLV 60
MLVSSIPK FPR ITIPLY KWVS FSTIGSSPRPL+NLSSFLNGRPSS+CLDYELSLV
Sbjct: 1 MLVSSIPKFFFPRRITIPLYPKWVSAFSTIGSSPRPLRNLSSFLNGRPSSNCLDYELSLV 60
Query: 61 SALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDSCSVL 120
S LK CASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGL SDARLLFDSCSVL
Sbjct: 61 STLKYCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLLSDARLLFDSCSVL 120
Query: 121 DSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVFKDMR 180
DSVSCNIMI GY+KLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVFKDMR
Sbjct: 121 DSVSCNIMISGYVKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVFKDMR 180
Query: 181 SAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVCSSLK 240
SAGVAPNEVTMASVMSACSHIGD+WNC MLHALVIKLHFFDLVLISTNLLHMYCV SSLK
Sbjct: 181 SAGVAPNEVTMASVMSACSHIGDMWNCRMLHALVIKLHFFDLVLISTNLLHMYCVRSSLK 240
Query: 241 DARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFVQMKR 300
DARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELF+RIPERDVISWATMIDGFVQ K+
Sbjct: 241 DARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFDRIPERDVISWATMIDGFVQGKQ 300
Query: 301 LREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDFIQAT 360
LREALLMYS+MRKSD+HPNEVMIVDLLSACGQSVSIDEGRQFH+L+VKNGFVCYDFIQAT
Sbjct: 301 LREALLMYSSMRKSDMHPNEVMIVDLLSACGQSVSIDEGRQFHSLMVKNGFVCYDFIQAT 360
Query: 361 FISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKDVFSW 420
ISFYAACGRIDLAYLQYQ+SDKSHL SSNALIVGFTKNRMIDQAR+IFD+MP+KDVFSW
Sbjct: 361 IISFYAACGRIDLAYLQYQMSDKSHLASSNALIVGFTKNRMIDQARQIFDMMPKKDVFSW 420
Query: 421 STMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCN 480
STMISGYAQNELPD+ALELFH MVVS+VEPNEITM SVFSAIAALG+L EGRWAHEYVCN
Sbjct: 421 STMISGYAQNELPDVALELFHRMVVSEVEPNEITMSSVFSAIAALGQLQEGRWAHEYVCN 480
Query: 481 KAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHANLSL 540
KAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHANLS+
Sbjct: 481 KAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHANLSI 540
Query: 541 EIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGCLVDL 600
+IFSNLQR SIKLNSITFLGVLGACCHAGLVELGER FWSMKTV+G+EPN+KHYGCLVDL
Sbjct: 541 KIFSNLQRMSIKLNSITFLGVLGACCHAGLVELGERCFWSMKTVHGIEPNIKHYGCLVDL 600
Query: 601 LGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGPGR 660
LGR GRLREAE IRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGPGR
Sbjct: 601 LGRVGRLREAEEIIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGPGR 660
Query: 661 VLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
VLLSNLYADAGLWEDA+LVR+AMQSQ++IRSPG SG+V
Sbjct: 661 VLLSNLYADAGLWEDAALVRKAMQSQKVIRSPGCSGIV 698
BLAST of Lsi09G013620 vs. NCBI nr
Match:
XP_023548174.1 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1259.2 bits (3257), Expect = 0.0e+00
Identity = 624/702 (88.89%), Postives = 659/702 (93.87%), Query Frame = 0
Query: 1 MLVSSIPKIFPRCITI-----PLYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDYE 60
MLV +IPK+FPR ITI PLY KWVSTFS IG S RPL NL+SF NGRPS CLDYE
Sbjct: 1 MLVFAIPKLFPRRITIPLSFTPLYPKWVSTFSPIGPSSRPLHNLTSFFNGRPSGKCLDYE 60
Query: 61 LSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDS 120
LSLVSALKSCASSSAIF GQQIH VLKSGF+SNTFILNSLINMY KCG +DARLLFDS
Sbjct: 61 LSLVSALKSCASSSAIFQGQQIHAAVLKSGFDSNTFILNSLINMYAKCGHIADARLLFDS 120
Query: 121 CSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVF 180
CS LDSVSCNIM+ GY+KLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIE+F
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180
Query: 181 KDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVC 240
KDMRSAGVAPNEVT+ASVMSACSHIG IWNC MLHALVIKLHF LVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240
Query: 241 SSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFV 300
SSLKDARRLF+EMPVRNTVSWNVMLKGYVKS L+D+A ELF+RIPERDVISWATMIDGFV
Sbjct: 241 SSLKDARRLFNEMPVRNTVSWNVMLKGYVKSDLVDKAIELFDRIPERDVISWATMIDGFV 300
Query: 301 QMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDF 360
++K+LREALLM+SAMRKSDLHPNEVMIVDLLSACGQS+SIDEGRQ H+++VK GF CYDF
Sbjct: 301 RVKQLREALLMFSAMRKSDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360
Query: 361 IQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKD 420
+QAT ISFY+ACGRI+LAYLQYQVSDKSHL +SNALIVGF KNRMIDQAR+IFDVMPEKD
Sbjct: 361 MQATLISFYSACGRIELAYLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPEKD 420
Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAHE 480
VFSWSTMISGYAQNELPDMALELFHGMVVS +EPNEITMVSVFSAIAA GKL EGRWAHE
Sbjct: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480
Query: 481 YVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHA 540
YVCNKAIPLNDNLSAA+IDMYAKCGSI TA+DVF+QIRDKASTVSPWNAIICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSIRTAMDVFYQIRDKASTVSPWNAIICGLAMHGHA 540
Query: 541 NLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGC 600
NLSLEIFS+LQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMK+VYGVEPN+KHYGC
Sbjct: 541 NLSLEIFSDLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600
Query: 601 LVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSH 660
LVDLLGRA RLREAE TIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660
Query: 661 GPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
G GRVLLSNLYADAGLWEDASLVR+AMQSQRMIRSPG SGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702
BLAST of Lsi09G013620 vs. NCBI nr
Match:
XP_016902281.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X1 [Cucumis melo])
HSP 1 Score: 1258.0 bits (3254), Expect = 0.0e+00
Identity = 626/703 (89.05%), Postives = 658/703 (93.60%), Query Frame = 0
Query: 1 MLVSSIPKIFPRCITI------PLYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDY 60
M+VSSIPK FPR I I PLYLKWVSTFS I SSP PLQNLS+FLNGRPSSS LD
Sbjct: 1 MVVSSIPKFFPRPIAIPLSFPPPLYLKWVSTFSKIESSPCPLQNLSTFLNGRPSSSSLDC 60
Query: 61 ELSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFD 120
ELS+VSALK CASSSAI GQQIH IVLK GFNSNTFILNSLINMYVKCGL S ARLLFD
Sbjct: 61 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 120
Query: 121 SCSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEV 180
SCSVLDSVSCNIM+ GYIKLRQLENARQLF KMPERGCVSYTTMILGLAQNDCW EAIEV
Sbjct: 121 SCSVLDSVSCNIMMSGYIKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180
Query: 181 FKDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCV 240
FKDMRSAGVAPNEVTMASVMSACSHIG IWNC MLHALVIKLHFF LVLISTNLLHMYCV
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCCMLHALVIKLHFFGLVLISTNLLHMYCV 240
Query: 241 CSSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGF 300
SSLKDA+RLF+EMPVRNTVSWNVMLKGYVKSGL+DQARELFERIPERDV SWATMIDGF
Sbjct: 241 FSSLKDAKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWATMIDGF 300
Query: 301 VQMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYD 360
VQMKRLREALL+YSAMRKSD HPNEV+IVDLLSACGQSVSIDEGRQFH+L+VKNGFVC+D
Sbjct: 301 VQMKRLREALLLYSAMRKSDFHPNEVLIVDLLSACGQSVSIDEGRQFHSLIVKNGFVCFD 360
Query: 361 FIQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEK 420
FIQ+T +SFYAACGRIDLAYLQYQ+SDKSHL SSN +IVGFTKN MIDQAR+IFD+MP K
Sbjct: 361 FIQSTIVSFYAACGRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPVK 420
Query: 421 DVFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAH 480
DVFSWSTMISGYAQNELPDMALELFH M+VS +EPNEITMVSVFSAIAALGKLPEGRW H
Sbjct: 421 DVFSWSTMISGYAQNELPDMALELFHAMIVSKIEPNEITMVSVFSAIAALGKLPEGRWTH 480
Query: 481 EYVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGH 540
EYV NKAIPLNDNLSAAIIDMYAKCGSI+TALDVFHQI+DK STVSPWNAIICGLAMHG
Sbjct: 481 EYVSNKAIPLNDNLSAAIIDMYAKCGSIDTALDVFHQIKDKTSTVSPWNAIICGLAMHGD 540
Query: 541 ANLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYG 600
ANLSLEIFSNLQ+R+IKLNSITFLGVLGACCHAGLVE+GERYFWSMKT +GVEPN+KHYG
Sbjct: 541 ANLSLEIFSNLQKRNIKLNSITFLGVLGACCHAGLVEVGERYFWSMKTQHGVEPNIKHYG 600
Query: 601 CLVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPS 660
CLVDLLGR GRLREAE +RTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPS
Sbjct: 601 CLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPS 660
Query: 661 HGPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
HGPGRVLLSNLYADAGLWEDA+LVRRAM+S+RMIRSPGYSGVV
Sbjct: 661 HGPGRVLLSNLYADAGLWEDAALVRRAMRSRRMIRSPGYSGVV 703
BLAST of Lsi09G013620 vs. NCBI nr
Match:
XP_011657204.1 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucumis sativus] >KGN47265.1 hypothetical protein Csa_016996 [Cucumis sativus])
HSP 1 Score: 1256.5 bits (3250), Expect = 0.0e+00
Identity = 626/703 (89.05%), Postives = 658/703 (93.60%), Query Frame = 0
Query: 1 MLVSSIPKIFPRCITI------PLYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDY 60
M+VSSIPK FPR I I PLYLKWVSTFSTI SSPRPLQNLSSFLNGRPSSS LD
Sbjct: 1 MVVSSIPKFFPRPIAIPLSFPPPLYLKWVSTFSTIESSPRPLQNLSSFLNGRPSSSSLDC 60
Query: 61 ELSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFD 120
ELS+VSALK CASSSAI GQQIH IVLK GFNSNTFILNSLINMYVKCGL S ARLLFD
Sbjct: 61 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 120
Query: 121 SCSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEV 180
SCSVLDSVSCNIM+ GY+KLRQLENARQLF KMPERGCVSYTTMILGLAQNDCW EAIEV
Sbjct: 121 SCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180
Query: 181 FKDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCV 240
FKDMRSAGVAPNEVTMASVMSACSHIG IWNC MLHALVIKLHFF LVLISTNLLHMYCV
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCV 240
Query: 241 CSSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGF 300
SSLKD +RLF+EMPVRNTVSWNVMLKGYVKSGL+DQARELFERIPERDV SWA MIDGF
Sbjct: 241 FSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGF 300
Query: 301 VQMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYD 360
VQMKRLR+ALL+YSAMRKSDLHPNEV+IVDLLSACGQSVSI+EGRQFH+L+VKNGFVC+D
Sbjct: 301 VQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFD 360
Query: 361 FIQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEK 420
FIQAT ISFYAAC RIDLAYLQYQ+SDKSHL SSN +IVGFTKN MIDQAR+IFD+MPEK
Sbjct: 361 FIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEK 420
Query: 421 DVFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAH 480
DVFSWSTMISGYAQNELPD+AL+LFHGM+ S VEPNEITMVSVFSAIAALGKLPEGRWAH
Sbjct: 421 DVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAH 480
Query: 481 EYVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGH 540
EYVCNK IPLNDNLSAAIIDMYAKCGSI+TALDVF QI+DK STVSPWNAIICGLAMHGH
Sbjct: 481 EYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGH 540
Query: 541 ANLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYG 600
ANLSLEIFSNLQRRSIKLNSITFLGVL ACCHAGLVE+GERYFWSMKT +GVEPN+KHYG
Sbjct: 541 ANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYG 600
Query: 601 CLVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPS 660
CLVDLLGR GRLREAE +RTMPMKADVVIWGTLLA+ RTHGEVEIGERAAE+LARL+PS
Sbjct: 601 CLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVEIGERAAENLARLQPS 660
Query: 661 HGPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
HGPGRVLLSNLYADAGLWEDA+LVRRA+QSQRMIRSPGYSGVV
Sbjct: 661 HGPGRVLLSNLYADAGLWEDAALVRRAIQSQRMIRSPGYSGVV 703
BLAST of Lsi09G013620 vs. NCBI nr
Match:
KAG6575019.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1248.8 bits (3230), Expect = 0.0e+00
Identity = 618/702 (88.03%), Postives = 657/702 (93.59%), Query Frame = 0
Query: 1 MLVSSIPKIFPRCITIP-----LYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDYE 60
MLV +IPK+FPR ITIP LY KWVSTFSTIG S RPL NL+SF NGRPS +CLDYE
Sbjct: 1 MLVFAIPKLFPRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60
Query: 61 LSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDS 120
LSLVSALKSCASSSAIF GQQIH VLKSGF+SNT+ILNSLINMY KCG +DARLLFDS
Sbjct: 61 LSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFDS 120
Query: 121 CSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVF 180
CS LDSVSCNIM+ GY+KLRQLENAR LFDKMPERGCVSYTTMILGLAQNDCWREAIE+F
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180
Query: 181 KDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVC 240
KDMRSAGVAPNEVT+ASVMSACSHIG IWNC MLHALVIKLHF LVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240
Query: 241 SSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFV 300
SS KDARRLF+EMPVRNTVSWNVMLKGYVKSGL+D+A ELF+RIPE+DVISWATMIDGFV
Sbjct: 241 SSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV 300
Query: 301 QMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDF 360
Q+K+LREALLM+SAMRK DLHPNEVMIVDLLSACGQS+SIDEGRQ H+++VK GF CYDF
Sbjct: 301 QVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360
Query: 361 IQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKD 420
+QAT ISFY+ACGRI+LA LQYQVSDKSHL +SNALIVGF KNRMIDQAR+IFDVMP KD
Sbjct: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKD 420
Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAHE 480
VFSWSTMISGYAQNELPDMALELFHGMVVS +EPNEITMVSVFSAIAA GKL EGRWAHE
Sbjct: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480
Query: 481 YVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHA 540
YVCNKAIPLNDNLSAA+IDMYAKCGSI+TA+D+F+QIRDKASTVSPWNAIICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHA 540
Query: 541 NLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGC 600
NLSLEIFS+LQ RSIKLNSITFLGVLGACCHAGLVELGERYFWSMK+VYGVEPN+KHYGC
Sbjct: 541 NLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600
Query: 601 LVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSH 660
LVDLLGRA RLREAE TIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660
Query: 661 GPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
G GRVLLSNLYADAGLWEDASLVR+AMQSQRMIRSPG SGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702
BLAST of Lsi09G013620 vs. TAIR 10
Match:
AT5G19020.1 (mitochondrial editing factor 18 )
HSP 1 Score: 775.8 bits (2002), Expect = 3.0e-224
Identity = 382/652 (58.59%), Postives = 495/652 (75.92%), Query Frame = 0
Query: 48 SSSCLDYELSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFS 107
S D E +LVSAL SCASS+ + G+QIH VLKSG +SN +I NS++NMY KC L +
Sbjct: 34 SGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLA 93
Query: 108 DARLLFDSCSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDC 167
DA +F + LDS S NIM+ GY++ R+L +A +LFD MPER CVSYTT+I G AQN+
Sbjct: 94 DAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQ 153
Query: 168 WREAIEVFKDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTN 227
W EA+E+F++MR+ G+ NEVT+A+V+SACSH+G IW+C ML +L IKL V +STN
Sbjct: 154 WSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTN 213
Query: 228 LLHMYCVCSSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISW 287
LLHMYC+C LKDAR+LF EMP RN V+WNVML GY K+GL++QA ELF++I E+D++SW
Sbjct: 214 LLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSW 273
Query: 288 ATMIDGFVQMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVK 347
TMIDG ++ +L EAL+ Y+ M + + P+EVM+VDLLSA +SV +G Q H +VK
Sbjct: 274 GTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVK 333
Query: 348 NGFVCYDFIQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKI 407
GF CYDF+QAT I FYA I LA Q++ S K H+ S NALI GF KN M++QAR++
Sbjct: 334 RGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREV 393
Query: 408 FDVMPEKDVFSWSTMISGYAQNELPDMALELFHGMV-VSDVEPNEITMVSVFSAIAALGK 467
FD +KD+FSW+ MISGYAQ+ P +AL LF M+ S V+P+ ITMVSVFSAI++LG
Sbjct: 394 FDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGS 453
Query: 468 LPEGRWAHEYVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRD-KASTVSPWNAI 527
L EG+ AH+Y+ IP NDNL+AAIIDMYAKCGSI TAL++FHQ ++ +ST+SPWNAI
Sbjct: 454 LEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAI 513
Query: 528 ICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYG 587
ICG A HGHA L+L+++S+LQ IK NSITF+GVL ACCHAGLVELG+ YF SMK+ +G
Sbjct: 514 ICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHG 573
Query: 588 VEPNVKHYGCLVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAA 647
+EP++KHYGC+VDLLG+AGRL EA+ I+ MP+KADV+IWG LL+A RTHG VEI E AA
Sbjct: 574 IEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAA 633
Query: 648 ESLARLEPSHGPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
LA ++PSHG +V+LSN+YADAG WED +LVR M+++ + S +SGVV
Sbjct: 634 TELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGVV 685
BLAST of Lsi09G013620 vs. TAIR 10
Match:
AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 412.5 bits (1059), Expect = 6.6e-115
Identity = 224/637 (35.16%), Postives = 359/637 (56.36%), Query Frame = 0
Query: 63 KSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDSCSVLDSV 122
KS S+ F Q +H V+KSG + +++N+L+N+Y K G AR LFD + +
Sbjct: 22 KSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAF 81
Query: 123 SCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVFKDMRSAG 182
S N ++ Y K +++ + FD++P+R VS+TTMI+G + +AI V DM G
Sbjct: 82 SWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG 141
Query: 183 VAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVCSSLKDAR 242
+ P + T+ +V+++ + + +H+ ++KL V +S +LL+MY C A+
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 243 RLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFVQMKRLRE 302
+F M VR+ SWN M+ +++ G +D A FE++ ERD+++W +MI GF Q
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261
Query: 303 ALLMYSAM-RKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDFIQATFI 362
AL ++S M R S L P+ + +LSAC + G+Q H+ +V GF + I
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321
Query: 363 SFYAACGRIDLA--YLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKDVFSW 422
S Y+ CG ++ A ++ + + + AL+ G+ K ++QA+ IF + ++DV +W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 423 STMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCN 482
+ MI GY Q+ A+ LF MV PN T+ ++ S ++L L G+ H
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441
Query: 483 KAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHANLSL 542
+ ++S A+I MYAK G+I +A F IR + TVS W ++I LA HGHA +L
Sbjct: 442 SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVS-WTSMIIALAQHGHAEEAL 501
Query: 543 EIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGCLVDL 602
E+F + ++ + IT++GV AC HAGLV G +YF MK V + P + HY C+VDL
Sbjct: 502 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 561
Query: 603 LGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGPGR 662
GRAG L+EA+ I MP++ DVV WG+LL+ACR H +++G+ AAE L LEP +
Sbjct: 562 FGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAY 621
Query: 663 VLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGV 697
L+NLY+ G WE+A+ +R++M+ R+ + G+S +
Sbjct: 622 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
BLAST of Lsi09G013620 vs. TAIR 10
Match:
AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 394.8 bits (1013), Expect = 1.4e-109
Identity = 240/666 (36.04%), Postives = 348/666 (52.25%), Query Frame = 0
Query: 38 NLSSFLNGRPSSSCLDYELSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLI 97
+LSSF + P + LD S +KS SAI+ + +H V+KSGF++ FI N LI
Sbjct: 12 DLSSFTDSSPFAKLLD------SCIKS--KLSAIYV-RYVHASVIKSGFSNEIFIQNRLI 71
Query: 98 NMYVKCGLFSDARLLFDSCSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTT 157
+ Y KCG D R +FD + + N ++ G KL L+ A LF MPER ++ +
Sbjct: 72 DAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNS 131
Query: 158 MILGLAQNDCWREAIEVFKDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLH 217
M+ G AQ+D EA+ F M G NE + ASV+SACS + D+ +H+L+ K
Sbjct: 132 MVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSP 191
Query: 218 FFDLVLISTNLLHMYCVCSSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFE 277
F V I + L+ MY C ++ DA+R+F EM RN VSWN
Sbjct: 192 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWN-------------------- 251
Query: 278 RIPERDVISWATMIDGFVQMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDE 337
++I F Q EAL ++ M +S + P+EV + ++SAC +I
Sbjct: 252 -----------SLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKV 311
Query: 338 GRQFHALVVKNGFVCYDFIQA-TFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFT 397
G++ H VVKN + D I + F+ YA C RI A + ++I+ ++I G+
Sbjct: 312 GQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYA 371
Query: 398 KNRMIDQARKIFDVMPEKDVFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVS 457
AR +F M E++V SW+ +I+GY QN + AL LF + V P + +
Sbjct: 372 MAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 431
Query: 458 VFSAIAALGKLPEGRWAHEYVCNKAIPLNDN------LSAAIIDMYAKCGSINTALDVFH 517
+ A A L +L G AH +V + ++IDMY KCG + VF
Sbjct: 432 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 491
Query: 518 QIRDKASTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLV 577
++ ++ WNA+I G A +G+ N +LE+F + K + IT +GVL AC HAG V
Sbjct: 492 KMMERDCV--SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFV 551
Query: 578 ELGERYFWSMKTVYGVEPNVKHYGCLVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLA 637
E G YF SM +GV P HY C+VDLLGRAG L EA+ I MPM+ D VIWG+LLA
Sbjct: 552 EEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLA 611
Query: 638 ACRTHGEVEIGERAAESLARLEPSHGPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRS 697
AC+ H + +G+ AE L +EPS+ VLLSN+YA+ G WED VR++M+ + + +
Sbjct: 612 ACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQ 635
BLAST of Lsi09G013620 vs. TAIR 10
Match:
AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )
HSP 1 Score: 382.1 bits (980), Expect = 9.5e-106
Identity = 214/637 (33.59%), Postives = 342/637 (53.69%), Query Frame = 0
Query: 62 LKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDSCSVLDS 121
L +CA S A G QIH +++K G+ + F+ NSL++ Y +CG
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG----------------- 200
Query: 122 VSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEV-FKDMRS 181
+L++AR++FD+M ER VS+T+MI G A+ D ++A+++ F+ +R
Sbjct: 201 --------------ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 260
Query: 182 AGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVCSSLKD 241
V PN VTM V+SAC+ + D+ ++A + L+ + L+ MY C+++
Sbjct: 261 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 320
Query: 242 ARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFVQMKRL 301
A+RLF E N N M YV+ GL
Sbjct: 321 AKRLFDEYGASNLDLCNAMASNYVRQGL-------------------------------T 380
Query: 302 REALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDFIQATF 361
REAL +++ M S + P+ + ++ +S+C Q +I G+ H V++NGF +D I
Sbjct: 381 REALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 440
Query: 362 ISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKDVFSWS 421
I Y C R D A+ + +++ N+++ G+ +N +D A + F+ MPEK++ SW+
Sbjct: 441 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 500
Query: 422 TMISGYAQNELPDMALELFHGMVVSD-VEPNEITMVSVFSAIAALGKLPEGRWAHEYVCN 481
T+ISG Q L + A+E+F M + V + +TM+S+ SA LG L +W + Y+
Sbjct: 501 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 560
Query: 482 KAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHANLSL 541
I L+ L ++DM+++CG +A+ +F+ + ++ VS W A I +AM G+A ++
Sbjct: 561 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR--DVSAWTAAIGAMAMAGNAERAI 620
Query: 542 EIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGCLVDL 601
E+F ++ + +K + + F+G L AC H GLV+ G+ F+SM ++GV P HYGC+VDL
Sbjct: 621 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 680
Query: 602 LGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGPGR 661
LGRAG L EA I MPM+ + VIW +LLAACR G VE+ AAE + L P
Sbjct: 681 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 713
Query: 662 VLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGV 697
VLLSN+YA AG W D + VR +M+ + + + PG S +
Sbjct: 741 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
BLAST of Lsi09G013620 vs. TAIR 10
Match:
AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )
HSP 1 Score: 382.1 bits (980), Expect = 9.5e-106
Identity = 214/637 (33.59%), Postives = 342/637 (53.69%), Query Frame = 0
Query: 62 LKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDSCSVLDS 121
L +CA S A G QIH +++K G+ + F+ NSL++ Y +CG
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG----------------- 200
Query: 122 VSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEV-FKDMRS 181
+L++AR++FD+M ER VS+T+MI G A+ D ++A+++ F+ +R
Sbjct: 201 --------------ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 260
Query: 182 AGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVCSSLKD 241
V PN VTM V+SAC+ + D+ ++A + L+ + L+ MY C+++
Sbjct: 261 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 320
Query: 242 ARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFVQMKRL 301
A+RLF E N N M YV+ GL
Sbjct: 321 AKRLFDEYGASNLDLCNAMASNYVRQGL-------------------------------T 380
Query: 302 REALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDFIQATF 361
REAL +++ M S + P+ + ++ +S+C Q +I G+ H V++NGF +D I
Sbjct: 381 REALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 440
Query: 362 ISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKDVFSWS 421
I Y C R D A+ + +++ N+++ G+ +N +D A + F+ MPEK++ SW+
Sbjct: 441 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 500
Query: 422 TMISGYAQNELPDMALELFHGMVVSD-VEPNEITMVSVFSAIAALGKLPEGRWAHEYVCN 481
T+ISG Q L + A+E+F M + V + +TM+S+ SA LG L +W + Y+
Sbjct: 501 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 560
Query: 482 KAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHANLSL 541
I L+ L ++DM+++CG +A+ +F+ + ++ VS W A I +AM G+A ++
Sbjct: 561 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR--DVSAWTAAIGAMAMAGNAERAI 620
Query: 542 EIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGCLVDL 601
E+F ++ + +K + + F+G L AC H GLV+ G+ F+SM ++GV P HYGC+VDL
Sbjct: 621 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 680
Query: 602 LGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGPGR 661
LGRAG L EA I MPM+ + VIW +LLAACR G VE+ AAE + L P
Sbjct: 681 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 713
Query: 662 VLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGV 697
VLLSN+YA AG W D + VR +M+ + + + PG S +
Sbjct: 741 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P0C8Q8 | 4.2e-223 | 58.59 | Pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Arabidop... | [more] |
Q9SHZ8 | 9.3e-114 | 35.16 | Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... | [more] |
Q9SIT7 | 2.0e-108 | 36.04 | Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... | [more] |
Q9LUJ2 | 1.3e-104 | 33.59 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
Q9LN01 | 4.3e-103 | 36.12 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S4E227 | 0.0e+00 | 89.05 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X1 ... | [more] |
A0A0A0KC16 | 0.0e+00 | 89.05 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G239150 PE=4 SV=1 | [more] |
A0A6J1H4P4 | 0.0e+00 | 88.03 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbit... | [more] |
A0A6J1L1I9 | 0.0e+00 | 87.89 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbit... | [more] |
A0A1S4E229 | 0.0e+00 | 86.06 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X2 ... | [more] |
Match Name | E-value | Identity | Description | |
XP_038876269.1 | 0.0e+00 | 92.84 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Benincasa ... | [more] |
XP_023548174.1 | 0.0e+00 | 88.89 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita ... | [more] |
XP_016902281.1 | 0.0e+00 | 89.05 | PREDICTED: pentatricopeptide repeat-containing protein At5g19020, mitochondrial ... | [more] |
XP_011657204.1 | 0.0e+00 | 89.05 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucumis sa... | [more] |
KAG6575019.1 | 0.0e+00 | 88.03 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
AT5G19020.1 | 3.0e-224 | 58.59 | mitochondrial editing factor 18 | [more] |
AT2G22070.1 | 6.6e-115 | 35.16 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT2G13600.1 | 1.4e-109 | 36.04 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G22690.1 | 9.5e-106 | 33.59 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... | [more] |
AT3G22690.2 | 9.5e-106 | 33.59 | INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... | [more] |