Lsi09G013620 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi09G013620
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr09: 21643705 .. 21645798 (+)
RNA-Seq ExpressionLsi09G013620
SyntenyLsi09G013620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCGTTTCTTCGATACCCAAAATTTTCCCTCGATGTATTACCATTCCTCTTTATCTCAAATGGGTCTCCACCTTCTCCACAATCGGATCTTCTCCACGCCCTCTCCAGAATCTTTCCTCATTCCTCAATGGCAGACCTTCAAGCAGCTGCTTGGATTACGAGCTCTCCTTGGTTTCAGCCTTGAAGTCCTGCGCATCCAGTTCAGCTATTTTTCCAGGGCAACAAATCCATGTTATCGTTCTCAAATCTGGGTTTAACTCCAATACTTTCATCCTTAATAGCTTGATCAATATGTATGTCAAATGTGGACTTTTTTCCGATGCTAGATTGCTGTTTGATTCGTGTTCTGTCTTGGATTCTGTATCTTGTAACATTATGATATATGGGTATATAAAACTTCGCCAATTGGAGAATGCACGCCAGTTATTCGACAAAATGCCTGAAAGAGGCTGCGTCTCTTACACCACCATGATTTTGGGTTTGGCACAGAATGATTGTTGGAGGGAAGCAATTGAGGTTTTTAAGGATATGAGGTCTGCAGGTGTGGCCCCAAATGAAGTGACAATGGCAAGTGTTATGTCAGCATGTTCACATATTGGTGATATTTGGAATTGTTGGATGCTCCATGCATTGGTAATAAAGTTACATTTCTTTGATCTTGTTCTTATTTCGACAAATTTGTTGCACATGTATTGTGTTTGTTCAAGTTTAAAGGATGCTAGGAGATTATTCAGTGAGATGCCAGTGCGTAATACTGTTTCATGGAATGTGATGTTAAAAGGGTATGTAAAATCAGGTCTTCTTGATCAAGCAAGAGAGTTGTTTGAGAGGATTCCAGAAAGAGATGTGATTTCTTGGGCTACAATGATTGATGGGTTTGTGCAAATGAAACGGTTAAGGGAAGCTTTGTTGATGTATTCTGCAATGAGAAAAAGTGATCTGCATCCCAATGAAGTGATGATTGTTGATTTGCTTTCTGCTTGTGGGCAGTCAGTTTCAATTGATGAGGGCAGGCAGTTCCATGCTTTGGTAGTAAAAAATGGTTTTGTTTGTTATGATTTCATACAAGCAACTTTTATTAGTTTCTATGCAGCTTGTGGAAGGATTGATCTTGCTTATTTGCAGTACCAAGTTAGTGATAAGAGTCATCTCATTTCTTCAAATGCTCTTATTGTGGGCTTCACAAAGAATAGAATGATTGATCAAGCAAGAAAAATATTTGATGTGATGCCTGAAAAAGATGTTTTTTCATGGAGCACCATGATTTCTGGTTATGCACAGAATGAGTTGCCTGATATGGCTTTAGAGCTTTTCCATGGAATGGTTGTTAGTGACGTCGAGCCTAACGAGATCACCATGGTTAGCGTTTTCTCCGCGATTGCAGCTTTAGGTAAACTACCGGAAGGAAGATGGGCCCATGAGTATGTTTGCAACAAAGCCATTCCTCTTAATGATAATTTGAGTGCTGCAATCATTGACATGTATGCCAAATGTGGAAGTATCAACACTGCCTTGGATGTGTTCCATCAGATTAGAGACAAGGCCTCCACAGTCTCGCCATGGAACGCCATCATATGTGGCTTGGCGATGCACGGGCATGCGAATTTATCTCTTGAAATATTTTCCAACTTGCAAAGACGGAGTATCAAGCTCAACTCAATCACATTTCTCGGCGTTCTAGGTGCTTGTTGCCATGCTGGATTAGTCGAGCTCGGGGAGAGATACTTCTGGAGCATGAAGACTGTATACGGCGTCGAACCAAATGTTAAGCATTATGGATGTCTAGTAGATCTGTTAGGCAGGGCTGGGCGGTTAAGGGAAGCGGAGGGAACTATAAGAACCATGCCAATGAAGGCAGATGTTGTGATATGGGGCACATTATTGGCAGCATGTAGAACACATGGGGAAGTCGAAATAGGTGAAAGAGCTGCAGAGAGTTTGGCTAGATTGGAACCGTCTCACGGGCCAGGTCGAGTCCTCCTGTCCAACTTATACGCTGATGCAGGGCTGTGGGAGGATGCATCCTTGGTCAGAAGAGCAATGCAAAGTCAAAGGATGATAAGATCACCTGGGTACAGTGGTGTTGTATGA

mRNA sequence

ATGCTCGTTTCTTCGATACCCAAAATTTTCCCTCGATGTATTACCATTCCTCTTTATCTCAAATGGGTCTCCACCTTCTCCACAATCGGATCTTCTCCACGCCCTCTCCAGAATCTTTCCTCATTCCTCAATGGCAGACCTTCAAGCAGCTGCTTGGATTACGAGCTCTCCTTGGTTTCAGCCTTGAAGTCCTGCGCATCCAGTTCAGCTATTTTTCCAGGGCAACAAATCCATGTTATCGTTCTCAAATCTGGGTTTAACTCCAATACTTTCATCCTTAATAGCTTGATCAATATGTATGTCAAATGTGGACTTTTTTCCGATGCTAGATTGCTGTTTGATTCGTGTTCTGTCTTGGATTCTGTATCTTGTAACATTATGATATATGGGTATATAAAACTTCGCCAATTGGAGAATGCACGCCAGTTATTCGACAAAATGCCTGAAAGAGGCTGCGTCTCTTACACCACCATGATTTTGGGTTTGGCACAGAATGATTGTTGGAGGGAAGCAATTGAGGTTTTTAAGGATATGAGGTCTGCAGGTGTGGCCCCAAATGAAGTGACAATGGCAAGTGTTATGTCAGCATGTTCACATATTGGTGATATTTGGAATTGTTGGATGCTCCATGCATTGGTAATAAAGTTACATTTCTTTGATCTTGTTCTTATTTCGACAAATTTGTTGCACATGTATTGTGTTTGTTCAAGTTTAAAGGATGCTAGGAGATTATTCAGTGAGATGCCAGTGCGTAATACTGTTTCATGGAATGTGATGTTAAAAGGGTATGTAAAATCAGGTCTTCTTGATCAAGCAAGAGAGTTGTTTGAGAGGATTCCAGAAAGAGATGTGATTTCTTGGGCTACAATGATTGATGGGTTTGTGCAAATGAAACGGTTAAGGGAAGCTTTGTTGATGTATTCTGCAATGAGAAAAAGTGATCTGCATCCCAATGAAGTGATGATTGTTGATTTGCTTTCTGCTTGTGGGCAGTCAGTTTCAATTGATGAGGGCAGGCAGTTCCATGCTTTGGTAGTAAAAAATGGTTTTGTTTGTTATGATTTCATACAAGCAACTTTTATTAGTTTCTATGCAGCTTGTGGAAGGATTGATCTTGCTTATTTGCAGTACCAAGTTAGTGATAAGAGTCATCTCATTTCTTCAAATGCTCTTATTGTGGGCTTCACAAAGAATAGAATGATTGATCAAGCAAGAAAAATATTTGATGTGATGCCTGAAAAAGATGTTTTTTCATGGAGCACCATGATTTCTGGTTATGCACAGAATGAGTTGCCTGATATGGCTTTAGAGCTTTTCCATGGAATGGTTGTTAGTGACGTCGAGCCTAACGAGATCACCATGGTTAGCGTTTTCTCCGCGATTGCAGCTTTAGGTAAACTACCGGAAGGAAGATGGGCCCATGAGTATGTTTGCAACAAAGCCATTCCTCTTAATGATAATTTGAGTGCTGCAATCATTGACATGTATGCCAAATGTGGAAGTATCAACACTGCCTTGGATGTGTTCCATCAGATTAGAGACAAGGCCTCCACAGTCTCGCCATGGAACGCCATCATATGTGGCTTGGCGATGCACGGGCATGCGAATTTATCTCTTGAAATATTTTCCAACTTGCAAAGACGGAGTATCAAGCTCAACTCAATCACATTTCTCGGCGTTCTAGGTGCTTGTTGCCATGCTGGATTAGTCGAGCTCGGGGAGAGATACTTCTGGAGCATGAAGACTGTATACGGCGTCGAACCAAATGTTAAGCATTATGGATGTCTAGTAGATCTGTTAGGCAGGGCTGGGCGGTTAAGGGAAGCGGAGGGAACTATAAGAACCATGCCAATGAAGGCAGATGTTGTGATATGGGGCACATTATTGGCAGCATGTAGAACACATGGGGAAGTCGAAATAGGTGAAAGAGCTGCAGAGAGTTTGGCTAGATTGGAACCGTCTCACGGGCCAGGTCGAGTCCTCCTGTCCAACTTATACGCTGATGCAGGGCTGTGGGAGGATGCATCCTTGGTCAGAAGAGCAATGCAAAGTCAAAGGATGATAAGATCACCTGGGTACAGTGGTGTTGTATGA

Coding sequence (CDS)

ATGCTCGTTTCTTCGATACCCAAAATTTTCCCTCGATGTATTACCATTCCTCTTTATCTCAAATGGGTCTCCACCTTCTCCACAATCGGATCTTCTCCACGCCCTCTCCAGAATCTTTCCTCATTCCTCAATGGCAGACCTTCAAGCAGCTGCTTGGATTACGAGCTCTCCTTGGTTTCAGCCTTGAAGTCCTGCGCATCCAGTTCAGCTATTTTTCCAGGGCAACAAATCCATGTTATCGTTCTCAAATCTGGGTTTAACTCCAATACTTTCATCCTTAATAGCTTGATCAATATGTATGTCAAATGTGGACTTTTTTCCGATGCTAGATTGCTGTTTGATTCGTGTTCTGTCTTGGATTCTGTATCTTGTAACATTATGATATATGGGTATATAAAACTTCGCCAATTGGAGAATGCACGCCAGTTATTCGACAAAATGCCTGAAAGAGGCTGCGTCTCTTACACCACCATGATTTTGGGTTTGGCACAGAATGATTGTTGGAGGGAAGCAATTGAGGTTTTTAAGGATATGAGGTCTGCAGGTGTGGCCCCAAATGAAGTGACAATGGCAAGTGTTATGTCAGCATGTTCACATATTGGTGATATTTGGAATTGTTGGATGCTCCATGCATTGGTAATAAAGTTACATTTCTTTGATCTTGTTCTTATTTCGACAAATTTGTTGCACATGTATTGTGTTTGTTCAAGTTTAAAGGATGCTAGGAGATTATTCAGTGAGATGCCAGTGCGTAATACTGTTTCATGGAATGTGATGTTAAAAGGGTATGTAAAATCAGGTCTTCTTGATCAAGCAAGAGAGTTGTTTGAGAGGATTCCAGAAAGAGATGTGATTTCTTGGGCTACAATGATTGATGGGTTTGTGCAAATGAAACGGTTAAGGGAAGCTTTGTTGATGTATTCTGCAATGAGAAAAAGTGATCTGCATCCCAATGAAGTGATGATTGTTGATTTGCTTTCTGCTTGTGGGCAGTCAGTTTCAATTGATGAGGGCAGGCAGTTCCATGCTTTGGTAGTAAAAAATGGTTTTGTTTGTTATGATTTCATACAAGCAACTTTTATTAGTTTCTATGCAGCTTGTGGAAGGATTGATCTTGCTTATTTGCAGTACCAAGTTAGTGATAAGAGTCATCTCATTTCTTCAAATGCTCTTATTGTGGGCTTCACAAAGAATAGAATGATTGATCAAGCAAGAAAAATATTTGATGTGATGCCTGAAAAAGATGTTTTTTCATGGAGCACCATGATTTCTGGTTATGCACAGAATGAGTTGCCTGATATGGCTTTAGAGCTTTTCCATGGAATGGTTGTTAGTGACGTCGAGCCTAACGAGATCACCATGGTTAGCGTTTTCTCCGCGATTGCAGCTTTAGGTAAACTACCGGAAGGAAGATGGGCCCATGAGTATGTTTGCAACAAAGCCATTCCTCTTAATGATAATTTGAGTGCTGCAATCATTGACATGTATGCCAAATGTGGAAGTATCAACACTGCCTTGGATGTGTTCCATCAGATTAGAGACAAGGCCTCCACAGTCTCGCCATGGAACGCCATCATATGTGGCTTGGCGATGCACGGGCATGCGAATTTATCTCTTGAAATATTTTCCAACTTGCAAAGACGGAGTATCAAGCTCAACTCAATCACATTTCTCGGCGTTCTAGGTGCTTGTTGCCATGCTGGATTAGTCGAGCTCGGGGAGAGATACTTCTGGAGCATGAAGACTGTATACGGCGTCGAACCAAATGTTAAGCATTATGGATGTCTAGTAGATCTGTTAGGCAGGGCTGGGCGGTTAAGGGAAGCGGAGGGAACTATAAGAACCATGCCAATGAAGGCAGATGTTGTGATATGGGGCACATTATTGGCAGCATGTAGAACACATGGGGAAGTCGAAATAGGTGAAAGAGCTGCAGAGAGTTTGGCTAGATTGGAACCGTCTCACGGGCCAGGTCGAGTCCTCCTGTCCAACTTATACGCTGATGCAGGGCTGTGGGAGGATGCATCCTTGGTCAGAAGAGCAATGCAAAGTCAAAGGATGATAAGATCACCTGGGTACAGTGGTGTTGTATGA

Protein sequence

MLVSSIPKIFPRCITIPLYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDYELSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDSCSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVFKDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVCSSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFVQMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDFIQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKDVFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGCLVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV
Homology
BLAST of Lsi09G013620 vs. ExPASy Swiss-Prot
Match: P0C8Q8 (Pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E42 PE=2 SV=1)

HSP 1 Score: 775.8 bits (2002), Expect = 4.2e-223
Identity = 382/652 (58.59%), Postives = 495/652 (75.92%), Query Frame = 0

Query: 48  SSSCLDYELSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFS 107
           S    D E +LVSAL SCASS+ +  G+QIH  VLKSG +SN +I NS++NMY KC L +
Sbjct: 34  SGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLA 93

Query: 108 DARLLFDSCSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDC 167
           DA  +F   + LDS S NIM+ GY++ R+L +A +LFD MPER CVSYTT+I G AQN+ 
Sbjct: 94  DAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQ 153

Query: 168 WREAIEVFKDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTN 227
           W EA+E+F++MR+ G+  NEVT+A+V+SACSH+G IW+C ML +L IKL     V +STN
Sbjct: 154 WSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTN 213

Query: 228 LLHMYCVCSSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISW 287
           LLHMYC+C  LKDAR+LF EMP RN V+WNVML GY K+GL++QA ELF++I E+D++SW
Sbjct: 214 LLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSW 273

Query: 288 ATMIDGFVQMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVK 347
            TMIDG ++  +L EAL+ Y+ M +  + P+EVM+VDLLSA  +SV   +G Q H  +VK
Sbjct: 274 GTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVK 333

Query: 348 NGFVCYDFIQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKI 407
            GF CYDF+QAT I FYA    I LA  Q++ S K H+ S NALI GF KN M++QAR++
Sbjct: 334 RGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREV 393

Query: 408 FDVMPEKDVFSWSTMISGYAQNELPDMALELFHGMV-VSDVEPNEITMVSVFSAIAALGK 467
           FD   +KD+FSW+ MISGYAQ+  P +AL LF  M+  S V+P+ ITMVSVFSAI++LG 
Sbjct: 394 FDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGS 453

Query: 468 LPEGRWAHEYVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRD-KASTVSPWNAI 527
           L EG+ AH+Y+    IP NDNL+AAIIDMYAKCGSI TAL++FHQ ++  +ST+SPWNAI
Sbjct: 454 LEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAI 513

Query: 528 ICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYG 587
           ICG A HGHA L+L+++S+LQ   IK NSITF+GVL ACCHAGLVELG+ YF SMK+ +G
Sbjct: 514 ICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHG 573

Query: 588 VEPNVKHYGCLVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAA 647
           +EP++KHYGC+VDLLG+AGRL EA+  I+ MP+KADV+IWG LL+A RTHG VEI E AA
Sbjct: 574 IEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAA 633

Query: 648 ESLARLEPSHGPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
             LA ++PSHG  +V+LSN+YADAG WED +LVR  M+++ +  S  +SGVV
Sbjct: 634 TELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGVV 685

BLAST of Lsi09G013620 vs. ExPASy Swiss-Prot
Match: Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 9.3e-114
Identity = 224/637 (35.16%), Postives = 359/637 (56.36%), Query Frame = 0

Query: 63  KSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDSCSVLDSV 122
           KS   S+  F  Q +H  V+KSG   + +++N+L+N+Y K G    AR LFD   +  + 
Sbjct: 22  KSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAF 81

Query: 123 SCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVFKDMRSAG 182
           S N ++  Y K   +++  + FD++P+R  VS+TTMI+G      + +AI V  DM   G
Sbjct: 82  SWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG 141

Query: 183 VAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVCSSLKDAR 242
           + P + T+ +V+++ +    +     +H+ ++KL     V +S +LL+MY  C     A+
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201

Query: 243 RLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFVQMKRLRE 302
            +F  M VR+  SWN M+  +++ G +D A   FE++ ERD+++W +MI GF Q      
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261

Query: 303 ALLMYSAM-RKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDFIQATFI 362
           AL ++S M R S L P+   +  +LSAC     +  G+Q H+ +V  GF     +    I
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321

Query: 363 SFYAACGRIDLA--YLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKDVFSW 422
           S Y+ CG ++ A   ++ + +    +    AL+ G+ K   ++QA+ IF  + ++DV +W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381

Query: 423 STMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCN 482
           + MI GY Q+     A+ LF  MV     PN  T+ ++ S  ++L  L  G+  H     
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441

Query: 483 KAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHANLSL 542
                + ++S A+I MYAK G+I +A   F  IR +  TVS W ++I  LA HGHA  +L
Sbjct: 442 SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVS-WTSMIIALAQHGHAEEAL 501

Query: 543 EIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGCLVDL 602
           E+F  +    ++ + IT++GV  AC HAGLV  G +YF  MK V  + P + HY C+VDL
Sbjct: 502 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 561

Query: 603 LGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGPGR 662
            GRAG L+EA+  I  MP++ DVV WG+LL+ACR H  +++G+ AAE L  LEP +    
Sbjct: 562 FGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAY 621

Query: 663 VLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGV 697
             L+NLY+  G WE+A+ +R++M+  R+ +  G+S +
Sbjct: 622 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657

BLAST of Lsi09G013620 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.0e-108
Identity = 240/666 (36.04%), Postives = 348/666 (52.25%), Query Frame = 0

Query: 38  NLSSFLNGRPSSSCLDYELSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLI 97
           +LSSF +  P +  LD      S +KS    SAI+  + +H  V+KSGF++  FI N LI
Sbjct: 12  DLSSFTDSSPFAKLLD------SCIKS--KLSAIYV-RYVHASVIKSGFSNEIFIQNRLI 71

Query: 98  NMYVKCGLFSDARLLFDSCSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTT 157
           + Y KCG   D R +FD     +  + N ++ G  KL  L+ A  LF  MPER   ++ +
Sbjct: 72  DAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNS 131

Query: 158 MILGLAQNDCWREAIEVFKDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLH 217
           M+ G AQ+D   EA+  F  M   G   NE + ASV+SACS + D+     +H+L+ K  
Sbjct: 132 MVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSP 191

Query: 218 FFDLVLISTNLLHMYCVCSSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFE 277
           F   V I + L+ MY  C ++ DA+R+F EM  RN VSWN                    
Sbjct: 192 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWN-------------------- 251

Query: 278 RIPERDVISWATMIDGFVQMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDE 337
                      ++I  F Q     EAL ++  M +S + P+EV +  ++SAC    +I  
Sbjct: 252 -----------SLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKV 311

Query: 338 GRQFHALVVKNGFVCYDFIQA-TFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFT 397
           G++ H  VVKN  +  D I +  F+  YA C RI  A   +      ++I+  ++I G+ 
Sbjct: 312 GQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYA 371

Query: 398 KNRMIDQARKIFDVMPEKDVFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVS 457
                  AR +F  M E++V SW+ +I+GY QN   + AL LF  +    V P   +  +
Sbjct: 372 MAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 431

Query: 458 VFSAIAALGKLPEGRWAHEYVCNKAIPLNDN------LSAAIIDMYAKCGSINTALDVFH 517
           +  A A L +L  G  AH +V                +  ++IDMY KCG +     VF 
Sbjct: 432 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 491

Query: 518 QIRDKASTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLV 577
           ++ ++      WNA+I G A +G+ N +LE+F  +     K + IT +GVL AC HAG V
Sbjct: 492 KMMERDCV--SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFV 551

Query: 578 ELGERYFWSMKTVYGVEPNVKHYGCLVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLA 637
           E G  YF SM   +GV P   HY C+VDLLGRAG L EA+  I  MPM+ D VIWG+LLA
Sbjct: 552 EEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLA 611

Query: 638 ACRTHGEVEIGERAAESLARLEPSHGPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRS 697
           AC+ H  + +G+  AE L  +EPS+    VLLSN+YA+ G WED   VR++M+ + + + 
Sbjct: 612 ACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQ 635

BLAST of Lsi09G013620 vs. ExPASy Swiss-Prot
Match: Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.3e-104
Identity = 214/637 (33.59%), Postives = 342/637 (53.69%), Query Frame = 0

Query: 62  LKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDSCSVLDS 121
           L +CA S A   G QIH +++K G+  + F+ NSL++ Y +CG                 
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG----------------- 200

Query: 122 VSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEV-FKDMRS 181
                         +L++AR++FD+M ER  VS+T+MI G A+ D  ++A+++ F+ +R 
Sbjct: 201 --------------ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 260

Query: 182 AGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVCSSLKD 241
             V PN VTM  V+SAC+ + D+     ++A +         L+ + L+ MY  C+++  
Sbjct: 261 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 320

Query: 242 ARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFVQMKRL 301
           A+RLF E    N    N M   YV+ GL                                
Sbjct: 321 AKRLFDEYGASNLDLCNAMASNYVRQGL-------------------------------T 380

Query: 302 REALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDFIQATF 361
           REAL +++ M  S + P+ + ++  +S+C Q  +I  G+  H  V++NGF  +D I    
Sbjct: 381 REALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 440

Query: 362 ISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKDVFSWS 421
           I  Y  C R D A+  +       +++ N+++ G+ +N  +D A + F+ MPEK++ SW+
Sbjct: 441 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 500

Query: 422 TMISGYAQNELPDMALELFHGMVVSD-VEPNEITMVSVFSAIAALGKLPEGRWAHEYVCN 481
           T+ISG  Q  L + A+E+F  M   + V  + +TM+S+ SA   LG L   +W + Y+  
Sbjct: 501 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 560

Query: 482 KAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHANLSL 541
             I L+  L   ++DM+++CG   +A+ +F+ + ++   VS W A I  +AM G+A  ++
Sbjct: 561 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR--DVSAWTAAIGAMAMAGNAERAI 620

Query: 542 EIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGCLVDL 601
           E+F ++  + +K + + F+G L AC H GLV+ G+  F+SM  ++GV P   HYGC+VDL
Sbjct: 621 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 680

Query: 602 LGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGPGR 661
           LGRAG L EA   I  MPM+ + VIW +LLAACR  G VE+   AAE +  L P      
Sbjct: 681 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 713

Query: 662 VLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGV 697
           VLLSN+YA AG W D + VR +M+ + + + PG S +
Sbjct: 741 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713

BLAST of Lsi09G013620 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.3e-103
Identity = 203/562 (36.12%), Postives = 312/562 (55.52%), Query Frame = 0

Query: 137 LENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVFKDMRSAGVAPNEVTMASVMSA 196
           L  A  +F  + E   + + TM  G A +     A++++  M S G+ PN  T   V+ +
Sbjct: 84  LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143

Query: 197 CSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVCSSLKDARRLFSEMPVRNTVSW 256
           C+          +H  V+KL     + + T+L+ MY     L+DA ++F + P R+ VS+
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203

Query: 257 NVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFVQMKRLREALLMYSAMRKSDLH 316
             ++KGY   G ++ A++LF+ IP +DV+SW  MI G+ +    +EAL ++  M K+++ 
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263

Query: 317 PNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDFIQATFISFYAACGRIDLAYLQ 376
           P+E  +V ++SAC QS SI+ GRQ H  +  +GF     I    I  Y+ CG ++ A   
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETAC-- 323

Query: 377 YQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKDVFSWSTMISGYAQNELPDMAL 436
                                         +F+ +P KDV SW+T+I GY    L   AL
Sbjct: 324 -----------------------------GLFERLPYKDVISWNTLIGGYTHMNLYKEAL 383

Query: 437 ELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCN--KAIPLNDNLSAAIID 496
            LF  M+ S   PN++TM+S+  A A LG +  GRW H Y+    K +    +L  ++ID
Sbjct: 384 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 443

Query: 497 MYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNS 556
           MYAKCG I  A  VF+ I  K  ++S WNA+I G AMHG A+ S ++FS +++  I+ + 
Sbjct: 444 MYAKCGDIEAAHQVFNSILHK--SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDD 503

Query: 557 ITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGCLVDLLGRAGRLREAEGTIR 616
           ITF+G+L AC H+G+++LG   F +M   Y + P ++HYGC++DLLG +G  +EAE  I 
Sbjct: 504 ITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMIN 563

Query: 617 TMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGPGRVLLSNLYADAGLWED 676
            M M+ D VIW +LL AC+ HG VE+GE  AE+L ++EP +    VLLSN+YA AG W +
Sbjct: 564 MMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNE 612

Query: 677 ASLVRRAMQSQRMIRSPGYSGV 697
            +  R  +  + M + PG S +
Sbjct: 624 VAKTRALLNDKGMKKVPGCSSI 612

BLAST of Lsi09G013620 vs. ExPASy TrEMBL
Match: A0A1S4E227 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497919 PE=4 SV=1)

HSP 1 Score: 1258.0 bits (3254), Expect = 0.0e+00
Identity = 626/703 (89.05%), Postives = 658/703 (93.60%), Query Frame = 0

Query: 1   MLVSSIPKIFPRCITI------PLYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDY 60
           M+VSSIPK FPR I I      PLYLKWVSTFS I SSP PLQNLS+FLNGRPSSS LD 
Sbjct: 1   MVVSSIPKFFPRPIAIPLSFPPPLYLKWVSTFSKIESSPCPLQNLSTFLNGRPSSSSLDC 60

Query: 61  ELSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFD 120
           ELS+VSALK CASSSAI  GQQIH IVLK GFNSNTFILNSLINMYVKCGL S ARLLFD
Sbjct: 61  ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 120

Query: 121 SCSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEV 180
           SCSVLDSVSCNIM+ GYIKLRQLENARQLF KMPERGCVSYTTMILGLAQNDCW EAIEV
Sbjct: 121 SCSVLDSVSCNIMMSGYIKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180

Query: 181 FKDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCV 240
           FKDMRSAGVAPNEVTMASVMSACSHIG IWNC MLHALVIKLHFF LVLISTNLLHMYCV
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCCMLHALVIKLHFFGLVLISTNLLHMYCV 240

Query: 241 CSSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGF 300
            SSLKDA+RLF+EMPVRNTVSWNVMLKGYVKSGL+DQARELFERIPERDV SWATMIDGF
Sbjct: 241 FSSLKDAKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWATMIDGF 300

Query: 301 VQMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYD 360
           VQMKRLREALL+YSAMRKSD HPNEV+IVDLLSACGQSVSIDEGRQFH+L+VKNGFVC+D
Sbjct: 301 VQMKRLREALLLYSAMRKSDFHPNEVLIVDLLSACGQSVSIDEGRQFHSLIVKNGFVCFD 360

Query: 361 FIQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEK 420
           FIQ+T +SFYAACGRIDLAYLQYQ+SDKSHL SSN +IVGFTKN MIDQAR+IFD+MP K
Sbjct: 361 FIQSTIVSFYAACGRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPVK 420

Query: 421 DVFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAH 480
           DVFSWSTMISGYAQNELPDMALELFH M+VS +EPNEITMVSVFSAIAALGKLPEGRW H
Sbjct: 421 DVFSWSTMISGYAQNELPDMALELFHAMIVSKIEPNEITMVSVFSAIAALGKLPEGRWTH 480

Query: 481 EYVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGH 540
           EYV NKAIPLNDNLSAAIIDMYAKCGSI+TALDVFHQI+DK STVSPWNAIICGLAMHG 
Sbjct: 481 EYVSNKAIPLNDNLSAAIIDMYAKCGSIDTALDVFHQIKDKTSTVSPWNAIICGLAMHGD 540

Query: 541 ANLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYG 600
           ANLSLEIFSNLQ+R+IKLNSITFLGVLGACCHAGLVE+GERYFWSMKT +GVEPN+KHYG
Sbjct: 541 ANLSLEIFSNLQKRNIKLNSITFLGVLGACCHAGLVEVGERYFWSMKTQHGVEPNIKHYG 600

Query: 601 CLVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPS 660
           CLVDLLGR GRLREAE  +RTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPS
Sbjct: 601 CLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPS 660

Query: 661 HGPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
           HGPGRVLLSNLYADAGLWEDA+LVRRAM+S+RMIRSPGYSGVV
Sbjct: 661 HGPGRVLLSNLYADAGLWEDAALVRRAMRSRRMIRSPGYSGVV 703

BLAST of Lsi09G013620 vs. ExPASy TrEMBL
Match: A0A0A0KC16 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G239150 PE=4 SV=1)

HSP 1 Score: 1256.5 bits (3250), Expect = 0.0e+00
Identity = 626/703 (89.05%), Postives = 658/703 (93.60%), Query Frame = 0

Query: 1   MLVSSIPKIFPRCITI------PLYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDY 60
           M+VSSIPK FPR I I      PLYLKWVSTFSTI SSPRPLQNLSSFLNGRPSSS LD 
Sbjct: 1   MVVSSIPKFFPRPIAIPLSFPPPLYLKWVSTFSTIESSPRPLQNLSSFLNGRPSSSSLDC 60

Query: 61  ELSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFD 120
           ELS+VSALK CASSSAI  GQQIH IVLK GFNSNTFILNSLINMYVKCGL S ARLLFD
Sbjct: 61  ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 120

Query: 121 SCSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEV 180
           SCSVLDSVSCNIM+ GY+KLRQLENARQLF KMPERGCVSYTTMILGLAQNDCW EAIEV
Sbjct: 121 SCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180

Query: 181 FKDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCV 240
           FKDMRSAGVAPNEVTMASVMSACSHIG IWNC MLHALVIKLHFF LVLISTNLLHMYCV
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCV 240

Query: 241 CSSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGF 300
            SSLKD +RLF+EMPVRNTVSWNVMLKGYVKSGL+DQARELFERIPERDV SWA MIDGF
Sbjct: 241 FSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGF 300

Query: 301 VQMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYD 360
           VQMKRLR+ALL+YSAMRKSDLHPNEV+IVDLLSACGQSVSI+EGRQFH+L+VKNGFVC+D
Sbjct: 301 VQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFD 360

Query: 361 FIQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEK 420
           FIQAT ISFYAAC RIDLAYLQYQ+SDKSHL SSN +IVGFTKN MIDQAR+IFD+MPEK
Sbjct: 361 FIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEK 420

Query: 421 DVFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAH 480
           DVFSWSTMISGYAQNELPD+AL+LFHGM+ S VEPNEITMVSVFSAIAALGKLPEGRWAH
Sbjct: 421 DVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAH 480

Query: 481 EYVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGH 540
           EYVCNK IPLNDNLSAAIIDMYAKCGSI+TALDVF QI+DK STVSPWNAIICGLAMHGH
Sbjct: 481 EYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGH 540

Query: 541 ANLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYG 600
           ANLSLEIFSNLQRRSIKLNSITFLGVL ACCHAGLVE+GERYFWSMKT +GVEPN+KHYG
Sbjct: 541 ANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYG 600

Query: 601 CLVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPS 660
           CLVDLLGR GRLREAE  +RTMPMKADVVIWGTLLA+ RTHGEVEIGERAAE+LARL+PS
Sbjct: 601 CLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVEIGERAAENLARLQPS 660

Query: 661 HGPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
           HGPGRVLLSNLYADAGLWEDA+LVRRA+QSQRMIRSPGYSGVV
Sbjct: 661 HGPGRVLLSNLYADAGLWEDAALVRRAIQSQRMIRSPGYSGVV 703

BLAST of Lsi09G013620 vs. ExPASy TrEMBL
Match: A0A6J1H4P4 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111460125 PE=4 SV=1)

HSP 1 Score: 1245.3 bits (3221), Expect = 0.0e+00
Identity = 618/702 (88.03%), Postives = 656/702 (93.45%), Query Frame = 0

Query: 1   MLVSSIPKIFPRCITIP-----LYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDYE 60
           M V +IPK+F R ITIP     LY KWVSTFSTIG S RPL NL+SF NGRPS +CLDYE
Sbjct: 1   MPVFAIPKLFSRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60

Query: 61  LSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDS 120
           LSLVSALK CASSSAIF GQQIH  VLKSGF+SNTFILNSLINMY KCG  +DARLLFDS
Sbjct: 61  LSLVSALKYCASSSAIFQGQQIHATVLKSGFDSNTFILNSLINMYAKCGHIADARLLFDS 120

Query: 121 CSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVF 180
           CS LDSVSCNIM+ GY+KLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIE+F
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180

Query: 181 KDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVC 240
           KDMRSAGVAPNEVT+ASVMSACSHIG IWNC MLHALVIKLHF  LVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240

Query: 241 SSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFV 300
           SSLKDARRLF+EMP+RNTVSWNVMLKGYVKSGL+D+A ELF+RIPERDVISWATMIDGFV
Sbjct: 241 SSLKDARRLFNEMPMRNTVSWNVMLKGYVKSGLVDKAIELFDRIPERDVISWATMIDGFV 300

Query: 301 QMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDF 360
           Q+K+LREAL M+SAMRKSDLHPNEVMIVDLLSACGQS+SIDEGRQ H+++VK GF CYDF
Sbjct: 301 QVKQLREALSMFSAMRKSDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360

Query: 361 IQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKD 420
           +QAT ISFY+ACGRI+LA LQYQVSDKSHL +SNALIVGF KNRMIDQAR+IFDVMP KD
Sbjct: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKD 420

Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAHE 480
           VFSWSTMISGYAQNELPDMALELFHGMVVS +EPNEITMVSVFSAIAA GKL EGRWAHE
Sbjct: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480

Query: 481 YVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHA 540
           YVCNKAIPLNDNLSAA+IDMYAKCGSI+TA+D+F+QIRDKASTVSPWNAIICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHA 540

Query: 541 NLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGC 600
           NLSLEIFS+LQ RSIKLNSITFLGVLGACCHAGLVELGERYFWSMK+VYGVEPN+KHYGC
Sbjct: 541 NLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600

Query: 601 LVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSH 660
           LVDLLGRA RLREAE TIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660

Query: 661 GPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
           G GRVLLSNLYADAGLWEDASLVR+AMQSQRMIRSPG SGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702

BLAST of Lsi09G013620 vs. ExPASy TrEMBL
Match: A0A6J1L1I9 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111499011 PE=4 SV=1)

HSP 1 Score: 1243.8 bits (3217), Expect = 0.0e+00
Identity = 617/702 (87.89%), Postives = 656/702 (93.45%), Query Frame = 0

Query: 1   MLVSSIPKIFPRCITI-----PLYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDYE 60
           MLV +IPK+F R ITI     PLY KWVS+FSTIG S RPL NL+SF NGRPS +CLDYE
Sbjct: 1   MLVFAIPKLFSRRITIPLSFTPLYPKWVSSFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60

Query: 61  LSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDS 120
           LSLVSALKSCASSSAIF GQQIH  VLKSGF+SNTFILNSLINMY KCG  +DARLLFDS
Sbjct: 61  LSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTFILNSLINMYAKCGHIADARLLFDS 120

Query: 121 CSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVF 180
           CS LDSVSCNIM+ GY+KLRQLENAR LFDKMPERGCVSYTTMILGLAQNDCWREAIE+F
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180

Query: 181 KDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVC 240
           KDMRSAGVAPNEVT+ASVMSACSHIG IWNC MLHALVIKLHF  LVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240

Query: 241 SSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFV 300
           SSLKDARRLF+EMPVRNTVSWNVMLKGYVKSGL+D+A ELF+RIPE+DVISWATMIDGFV
Sbjct: 241 SSLKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV 300

Query: 301 QMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDF 360
           Q+K+LREAL M+SAMRKSDLHPNEVMIVDLLSACGQS+SIDEGRQ H+++VK GF CYDF
Sbjct: 301 QVKQLREALSMFSAMRKSDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360

Query: 361 IQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKD 420
           +QAT ISFY+ACGRI+LA LQYQVSDKSHL +SNALIVGF KNRMIDQAR+IFDVMPEKD
Sbjct: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPEKD 420

Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAHE 480
           VFSWSTMISGYAQNELPD+ALELFHGMVV  V  NEITMVSVFSAIAA GKL EGRWAHE
Sbjct: 421 VFSWSTMISGYAQNELPDVALELFHGMVVRGVVANEITMVSVFSAIAASGKLAEGRWAHE 480

Query: 481 YVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHA 540
           YVCNKAIPLNDNLSAA+IDMYAKCGSI+TA++VF+QIRDKASTVSPWNA+ICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMNVFYQIRDKASTVSPWNAVICGLAMHGHA 540

Query: 541 NLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGC 600
           NLSLEIFS+LQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMK+VYGVEPN+KHYGC
Sbjct: 541 NLSLEIFSDLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600

Query: 601 LVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSH 660
           LVDLLGRA RLREAE TIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660

Query: 661 GPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
           G GRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPG SGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGVV 702

BLAST of Lsi09G013620 vs. ExPASy TrEMBL
Match: A0A1S4E229 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497919 PE=4 SV=1)

HSP 1 Score: 1204.1 bits (3114), Expect = 0.0e+00
Identity = 605/703 (86.06%), Postives = 637/703 (90.61%), Query Frame = 0

Query: 1   MLVSSIPKIFPRCITI------PLYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDY 60
           M+VSSIPK FPR I I      PLYLKWVSTFS I SSP PLQNLS+FLNGRPSSS LD 
Sbjct: 1   MVVSSIPKFFPRPIAIPLSFPPPLYLKWVSTFSKIESSPCPLQNLSTFLNGRPSSSSLDC 60

Query: 61  ELSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFD 120
           ELS+VSALK CASSSAI  GQQIH IVLK G                       ARLLFD
Sbjct: 61  ELSVVSALKYCASSSAISSGQQIHAIVLKYG-----------------------ARLLFD 120

Query: 121 SCSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEV 180
           SCSVLDSVSCNIM+ GYIKLRQLENARQLF KMPERGCVSYTTMILGLAQNDCW EAIEV
Sbjct: 121 SCSVLDSVSCNIMMSGYIKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180

Query: 181 FKDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCV 240
           FKDMRSAGVAPNEVTMASVMSACSHIG IWNC MLHALVIKLHFF LVLISTNLLHMYCV
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCCMLHALVIKLHFFGLVLISTNLLHMYCV 240

Query: 241 CSSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGF 300
            SSLKDA+RLF+EMPVRNTVSWNVMLKGYVKSGL+DQARELFERIPERDV SWATMIDGF
Sbjct: 241 FSSLKDAKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWATMIDGF 300

Query: 301 VQMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYD 360
           VQMKRLREALL+YSAMRKSD HPNEV+IVDLLSACGQSVSIDEGRQFH+L+VKNGFVC+D
Sbjct: 301 VQMKRLREALLLYSAMRKSDFHPNEVLIVDLLSACGQSVSIDEGRQFHSLIVKNGFVCFD 360

Query: 361 FIQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEK 420
           FIQ+T +SFYAACGRIDLAYLQYQ+SDKSHL SSN +IVGFTKN MIDQAR+IFD+MP K
Sbjct: 361 FIQSTIVSFYAACGRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPVK 420

Query: 421 DVFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAH 480
           DVFSWSTMISGYAQNELPDMALELFH M+VS +EPNEITMVSVFSAIAALGKLPEGRW H
Sbjct: 421 DVFSWSTMISGYAQNELPDMALELFHAMIVSKIEPNEITMVSVFSAIAALGKLPEGRWTH 480

Query: 481 EYVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGH 540
           EYV NKAIPLNDNLSAAIIDMYAKCGSI+TALDVFHQI+DK STVSPWNAIICGLAMHG 
Sbjct: 481 EYVSNKAIPLNDNLSAAIIDMYAKCGSIDTALDVFHQIKDKTSTVSPWNAIICGLAMHGD 540

Query: 541 ANLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYG 600
           ANLSLEIFSNLQ+R+IKLNSITFLGVLGACCHAGLVE+GERYFWSMKT +GVEPN+KHYG
Sbjct: 541 ANLSLEIFSNLQKRNIKLNSITFLGVLGACCHAGLVEVGERYFWSMKTQHGVEPNIKHYG 600

Query: 601 CLVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPS 660
           CLVDLLGR GRLREAE  +RTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPS
Sbjct: 601 CLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPS 660

Query: 661 HGPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
           HGPGRVLLSNLYADAGLWEDA+LVRRAM+S+RMIRSPGYSGVV
Sbjct: 661 HGPGRVLLSNLYADAGLWEDAALVRRAMRSRRMIRSPGYSGVV 680

BLAST of Lsi09G013620 vs. NCBI nr
Match: XP_038876269.1 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Benincasa hispida])

HSP 1 Score: 1304.7 bits (3375), Expect = 0.0e+00
Identity = 648/698 (92.84%), Postives = 675/698 (96.70%), Query Frame = 0

Query: 1   MLVSSIPK-IFPRCITIPLYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDYELSLV 60
           MLVSSIPK  FPR ITIPLY KWVS FSTIGSSPRPL+NLSSFLNGRPSS+CLDYELSLV
Sbjct: 1   MLVSSIPKFFFPRRITIPLYPKWVSAFSTIGSSPRPLRNLSSFLNGRPSSNCLDYELSLV 60

Query: 61  SALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDSCSVL 120
           S LK CASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGL SDARLLFDSCSVL
Sbjct: 61  STLKYCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLLSDARLLFDSCSVL 120

Query: 121 DSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVFKDMR 180
           DSVSCNIMI GY+KLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVFKDMR
Sbjct: 121 DSVSCNIMISGYVKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVFKDMR 180

Query: 181 SAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVCSSLK 240
           SAGVAPNEVTMASVMSACSHIGD+WNC MLHALVIKLHFFDLVLISTNLLHMYCV SSLK
Sbjct: 181 SAGVAPNEVTMASVMSACSHIGDMWNCRMLHALVIKLHFFDLVLISTNLLHMYCVRSSLK 240

Query: 241 DARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFVQMKR 300
           DARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELF+RIPERDVISWATMIDGFVQ K+
Sbjct: 241 DARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFDRIPERDVISWATMIDGFVQGKQ 300

Query: 301 LREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDFIQAT 360
           LREALLMYS+MRKSD+HPNEVMIVDLLSACGQSVSIDEGRQFH+L+VKNGFVCYDFIQAT
Sbjct: 301 LREALLMYSSMRKSDMHPNEVMIVDLLSACGQSVSIDEGRQFHSLMVKNGFVCYDFIQAT 360

Query: 361 FISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKDVFSW 420
            ISFYAACGRIDLAYLQYQ+SDKSHL SSNALIVGFTKNRMIDQAR+IFD+MP+KDVFSW
Sbjct: 361 IISFYAACGRIDLAYLQYQMSDKSHLASSNALIVGFTKNRMIDQARQIFDMMPKKDVFSW 420

Query: 421 STMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCN 480
           STMISGYAQNELPD+ALELFH MVVS+VEPNEITM SVFSAIAALG+L EGRWAHEYVCN
Sbjct: 421 STMISGYAQNELPDVALELFHRMVVSEVEPNEITMSSVFSAIAALGQLQEGRWAHEYVCN 480

Query: 481 KAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHANLSL 540
           KAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHANLS+
Sbjct: 481 KAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHANLSI 540

Query: 541 EIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGCLVDL 600
           +IFSNLQR SIKLNSITFLGVLGACCHAGLVELGER FWSMKTV+G+EPN+KHYGCLVDL
Sbjct: 541 KIFSNLQRMSIKLNSITFLGVLGACCHAGLVELGERCFWSMKTVHGIEPNIKHYGCLVDL 600

Query: 601 LGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGPGR 660
           LGR GRLREAE  IRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGPGR
Sbjct: 601 LGRVGRLREAEEIIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGPGR 660

Query: 661 VLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
           VLLSNLYADAGLWEDA+LVR+AMQSQ++IRSPG SG+V
Sbjct: 661 VLLSNLYADAGLWEDAALVRKAMQSQKVIRSPGCSGIV 698

BLAST of Lsi09G013620 vs. NCBI nr
Match: XP_023548174.1 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1259.2 bits (3257), Expect = 0.0e+00
Identity = 624/702 (88.89%), Postives = 659/702 (93.87%), Query Frame = 0

Query: 1   MLVSSIPKIFPRCITI-----PLYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDYE 60
           MLV +IPK+FPR ITI     PLY KWVSTFS IG S RPL NL+SF NGRPS  CLDYE
Sbjct: 1   MLVFAIPKLFPRRITIPLSFTPLYPKWVSTFSPIGPSSRPLHNLTSFFNGRPSGKCLDYE 60

Query: 61  LSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDS 120
           LSLVSALKSCASSSAIF GQQIH  VLKSGF+SNTFILNSLINMY KCG  +DARLLFDS
Sbjct: 61  LSLVSALKSCASSSAIFQGQQIHAAVLKSGFDSNTFILNSLINMYAKCGHIADARLLFDS 120

Query: 121 CSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVF 180
           CS LDSVSCNIM+ GY+KLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIE+F
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180

Query: 181 KDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVC 240
           KDMRSAGVAPNEVT+ASVMSACSHIG IWNC MLHALVIKLHF  LVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240

Query: 241 SSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFV 300
           SSLKDARRLF+EMPVRNTVSWNVMLKGYVKS L+D+A ELF+RIPERDVISWATMIDGFV
Sbjct: 241 SSLKDARRLFNEMPVRNTVSWNVMLKGYVKSDLVDKAIELFDRIPERDVISWATMIDGFV 300

Query: 301 QMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDF 360
           ++K+LREALLM+SAMRKSDLHPNEVMIVDLLSACGQS+SIDEGRQ H+++VK GF CYDF
Sbjct: 301 RVKQLREALLMFSAMRKSDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360

Query: 361 IQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKD 420
           +QAT ISFY+ACGRI+LAYLQYQVSDKSHL +SNALIVGF KNRMIDQAR+IFDVMPEKD
Sbjct: 361 MQATLISFYSACGRIELAYLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPEKD 420

Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAHE 480
           VFSWSTMISGYAQNELPDMALELFHGMVVS +EPNEITMVSVFSAIAA GKL EGRWAHE
Sbjct: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480

Query: 481 YVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHA 540
           YVCNKAIPLNDNLSAA+IDMYAKCGSI TA+DVF+QIRDKASTVSPWNAIICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSIRTAMDVFYQIRDKASTVSPWNAIICGLAMHGHA 540

Query: 541 NLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGC 600
           NLSLEIFS+LQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMK+VYGVEPN+KHYGC
Sbjct: 541 NLSLEIFSDLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600

Query: 601 LVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSH 660
           LVDLLGRA RLREAE TIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660

Query: 661 GPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
           G GRVLLSNLYADAGLWEDASLVR+AMQSQRMIRSPG SGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702

BLAST of Lsi09G013620 vs. NCBI nr
Match: XP_016902281.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 1258.0 bits (3254), Expect = 0.0e+00
Identity = 626/703 (89.05%), Postives = 658/703 (93.60%), Query Frame = 0

Query: 1   MLVSSIPKIFPRCITI------PLYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDY 60
           M+VSSIPK FPR I I      PLYLKWVSTFS I SSP PLQNLS+FLNGRPSSS LD 
Sbjct: 1   MVVSSIPKFFPRPIAIPLSFPPPLYLKWVSTFSKIESSPCPLQNLSTFLNGRPSSSSLDC 60

Query: 61  ELSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFD 120
           ELS+VSALK CASSSAI  GQQIH IVLK GFNSNTFILNSLINMYVKCGL S ARLLFD
Sbjct: 61  ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 120

Query: 121 SCSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEV 180
           SCSVLDSVSCNIM+ GYIKLRQLENARQLF KMPERGCVSYTTMILGLAQNDCW EAIEV
Sbjct: 121 SCSVLDSVSCNIMMSGYIKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180

Query: 181 FKDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCV 240
           FKDMRSAGVAPNEVTMASVMSACSHIG IWNC MLHALVIKLHFF LVLISTNLLHMYCV
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCCMLHALVIKLHFFGLVLISTNLLHMYCV 240

Query: 241 CSSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGF 300
            SSLKDA+RLF+EMPVRNTVSWNVMLKGYVKSGL+DQARELFERIPERDV SWATMIDGF
Sbjct: 241 FSSLKDAKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWATMIDGF 300

Query: 301 VQMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYD 360
           VQMKRLREALL+YSAMRKSD HPNEV+IVDLLSACGQSVSIDEGRQFH+L+VKNGFVC+D
Sbjct: 301 VQMKRLREALLLYSAMRKSDFHPNEVLIVDLLSACGQSVSIDEGRQFHSLIVKNGFVCFD 360

Query: 361 FIQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEK 420
           FIQ+T +SFYAACGRIDLAYLQYQ+SDKSHL SSN +IVGFTKN MIDQAR+IFD+MP K
Sbjct: 361 FIQSTIVSFYAACGRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPVK 420

Query: 421 DVFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAH 480
           DVFSWSTMISGYAQNELPDMALELFH M+VS +EPNEITMVSVFSAIAALGKLPEGRW H
Sbjct: 421 DVFSWSTMISGYAQNELPDMALELFHAMIVSKIEPNEITMVSVFSAIAALGKLPEGRWTH 480

Query: 481 EYVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGH 540
           EYV NKAIPLNDNLSAAIIDMYAKCGSI+TALDVFHQI+DK STVSPWNAIICGLAMHG 
Sbjct: 481 EYVSNKAIPLNDNLSAAIIDMYAKCGSIDTALDVFHQIKDKTSTVSPWNAIICGLAMHGD 540

Query: 541 ANLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYG 600
           ANLSLEIFSNLQ+R+IKLNSITFLGVLGACCHAGLVE+GERYFWSMKT +GVEPN+KHYG
Sbjct: 541 ANLSLEIFSNLQKRNIKLNSITFLGVLGACCHAGLVEVGERYFWSMKTQHGVEPNIKHYG 600

Query: 601 CLVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPS 660
           CLVDLLGR GRLREAE  +RTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPS
Sbjct: 601 CLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPS 660

Query: 661 HGPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
           HGPGRVLLSNLYADAGLWEDA+LVRRAM+S+RMIRSPGYSGVV
Sbjct: 661 HGPGRVLLSNLYADAGLWEDAALVRRAMRSRRMIRSPGYSGVV 703

BLAST of Lsi09G013620 vs. NCBI nr
Match: XP_011657204.1 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucumis sativus] >KGN47265.1 hypothetical protein Csa_016996 [Cucumis sativus])

HSP 1 Score: 1256.5 bits (3250), Expect = 0.0e+00
Identity = 626/703 (89.05%), Postives = 658/703 (93.60%), Query Frame = 0

Query: 1   MLVSSIPKIFPRCITI------PLYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDY 60
           M+VSSIPK FPR I I      PLYLKWVSTFSTI SSPRPLQNLSSFLNGRPSSS LD 
Sbjct: 1   MVVSSIPKFFPRPIAIPLSFPPPLYLKWVSTFSTIESSPRPLQNLSSFLNGRPSSSSLDC 60

Query: 61  ELSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFD 120
           ELS+VSALK CASSSAI  GQQIH IVLK GFNSNTFILNSLINMYVKCGL S ARLLFD
Sbjct: 61  ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 120

Query: 121 SCSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEV 180
           SCSVLDSVSCNIM+ GY+KLRQLENARQLF KMPERGCVSYTTMILGLAQNDCW EAIEV
Sbjct: 121 SCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180

Query: 181 FKDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCV 240
           FKDMRSAGVAPNEVTMASVMSACSHIG IWNC MLHALVIKLHFF LVLISTNLLHMYCV
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCV 240

Query: 241 CSSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGF 300
            SSLKD +RLF+EMPVRNTVSWNVMLKGYVKSGL+DQARELFERIPERDV SWA MIDGF
Sbjct: 241 FSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGF 300

Query: 301 VQMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYD 360
           VQMKRLR+ALL+YSAMRKSDLHPNEV+IVDLLSACGQSVSI+EGRQFH+L+VKNGFVC+D
Sbjct: 301 VQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFD 360

Query: 361 FIQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEK 420
           FIQAT ISFYAAC RIDLAYLQYQ+SDKSHL SSN +IVGFTKN MIDQAR+IFD+MPEK
Sbjct: 361 FIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEK 420

Query: 421 DVFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAH 480
           DVFSWSTMISGYAQNELPD+AL+LFHGM+ S VEPNEITMVSVFSAIAALGKLPEGRWAH
Sbjct: 421 DVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAH 480

Query: 481 EYVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGH 540
           EYVCNK IPLNDNLSAAIIDMYAKCGSI+TALDVF QI+DK STVSPWNAIICGLAMHGH
Sbjct: 481 EYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGH 540

Query: 541 ANLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYG 600
           ANLSLEIFSNLQRRSIKLNSITFLGVL ACCHAGLVE+GERYFWSMKT +GVEPN+KHYG
Sbjct: 541 ANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYG 600

Query: 601 CLVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPS 660
           CLVDLLGR GRLREAE  +RTMPMKADVVIWGTLLA+ RTHGEVEIGERAAE+LARL+PS
Sbjct: 601 CLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVEIGERAAENLARLQPS 660

Query: 661 HGPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
           HGPGRVLLSNLYADAGLWEDA+LVRRA+QSQRMIRSPGYSGVV
Sbjct: 661 HGPGRVLLSNLYADAGLWEDAALVRRAIQSQRMIRSPGYSGVV 703

BLAST of Lsi09G013620 vs. NCBI nr
Match: KAG6575019.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1248.8 bits (3230), Expect = 0.0e+00
Identity = 618/702 (88.03%), Postives = 657/702 (93.59%), Query Frame = 0

Query: 1   MLVSSIPKIFPRCITIP-----LYLKWVSTFSTIGSSPRPLQNLSSFLNGRPSSSCLDYE 60
           MLV +IPK+FPR ITIP     LY KWVSTFSTIG S RPL NL+SF NGRPS +CLDYE
Sbjct: 1   MLVFAIPKLFPRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60

Query: 61  LSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDS 120
           LSLVSALKSCASSSAIF GQQIH  VLKSGF+SNT+ILNSLINMY KCG  +DARLLFDS
Sbjct: 61  LSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFDS 120

Query: 121 CSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVF 180
           CS LDSVSCNIM+ GY+KLRQLENAR LFDKMPERGCVSYTTMILGLAQNDCWREAIE+F
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180

Query: 181 KDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVC 240
           KDMRSAGVAPNEVT+ASVMSACSHIG IWNC MLHALVIKLHF  LVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240

Query: 241 SSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFV 300
           SS KDARRLF+EMPVRNTVSWNVMLKGYVKSGL+D+A ELF+RIPE+DVISWATMIDGFV
Sbjct: 241 SSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV 300

Query: 301 QMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDF 360
           Q+K+LREALLM+SAMRK DLHPNEVMIVDLLSACGQS+SIDEGRQ H+++VK GF CYDF
Sbjct: 301 QVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360

Query: 361 IQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKD 420
           +QAT ISFY+ACGRI+LA LQYQVSDKSHL +SNALIVGF KNRMIDQAR+IFDVMP KD
Sbjct: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKD 420

Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAHE 480
           VFSWSTMISGYAQNELPDMALELFHGMVVS +EPNEITMVSVFSAIAA GKL EGRWAHE
Sbjct: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480

Query: 481 YVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHA 540
           YVCNKAIPLNDNLSAA+IDMYAKCGSI+TA+D+F+QIRDKASTVSPWNAIICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHA 540

Query: 541 NLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGC 600
           NLSLEIFS+LQ RSIKLNSITFLGVLGACCHAGLVELGERYFWSMK+VYGVEPN+KHYGC
Sbjct: 541 NLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600

Query: 601 LVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSH 660
           LVDLLGRA RLREAE TIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660

Query: 661 GPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
           G GRVLLSNLYADAGLWEDASLVR+AMQSQRMIRSPG SGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702

BLAST of Lsi09G013620 vs. TAIR 10
Match: AT5G19020.1 (mitochondrial editing factor 18 )

HSP 1 Score: 775.8 bits (2002), Expect = 3.0e-224
Identity = 382/652 (58.59%), Postives = 495/652 (75.92%), Query Frame = 0

Query: 48  SSSCLDYELSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFS 107
           S    D E +LVSAL SCASS+ +  G+QIH  VLKSG +SN +I NS++NMY KC L +
Sbjct: 34  SGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLA 93

Query: 108 DARLLFDSCSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDC 167
           DA  +F   + LDS S NIM+ GY++ R+L +A +LFD MPER CVSYTT+I G AQN+ 
Sbjct: 94  DAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQ 153

Query: 168 WREAIEVFKDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTN 227
           W EA+E+F++MR+ G+  NEVT+A+V+SACSH+G IW+C ML +L IKL     V +STN
Sbjct: 154 WSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTN 213

Query: 228 LLHMYCVCSSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISW 287
           LLHMYC+C  LKDAR+LF EMP RN V+WNVML GY K+GL++QA ELF++I E+D++SW
Sbjct: 214 LLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSW 273

Query: 288 ATMIDGFVQMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVK 347
            TMIDG ++  +L EAL+ Y+ M +  + P+EVM+VDLLSA  +SV   +G Q H  +VK
Sbjct: 274 GTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVK 333

Query: 348 NGFVCYDFIQATFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKI 407
            GF CYDF+QAT I FYA    I LA  Q++ S K H+ S NALI GF KN M++QAR++
Sbjct: 334 RGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREV 393

Query: 408 FDVMPEKDVFSWSTMISGYAQNELPDMALELFHGMV-VSDVEPNEITMVSVFSAIAALGK 467
           FD   +KD+FSW+ MISGYAQ+  P +AL LF  M+  S V+P+ ITMVSVFSAI++LG 
Sbjct: 394 FDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGS 453

Query: 468 LPEGRWAHEYVCNKAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRD-KASTVSPWNAI 527
           L EG+ AH+Y+    IP NDNL+AAIIDMYAKCGSI TAL++FHQ ++  +ST+SPWNAI
Sbjct: 454 LEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAI 513

Query: 528 ICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYG 587
           ICG A HGHA L+L+++S+LQ   IK NSITF+GVL ACCHAGLVELG+ YF SMK+ +G
Sbjct: 514 ICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHG 573

Query: 588 VEPNVKHYGCLVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAA 647
           +EP++KHYGC+VDLLG+AGRL EA+  I+ MP+KADV+IWG LL+A RTHG VEI E AA
Sbjct: 574 IEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAA 633

Query: 648 ESLARLEPSHGPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGVV 698
             LA ++PSHG  +V+LSN+YADAG WED +LVR  M+++ +  S  +SGVV
Sbjct: 634 TELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGVV 685

BLAST of Lsi09G013620 vs. TAIR 10
Match: AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 412.5 bits (1059), Expect = 6.6e-115
Identity = 224/637 (35.16%), Postives = 359/637 (56.36%), Query Frame = 0

Query: 63  KSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDSCSVLDSV 122
           KS   S+  F  Q +H  V+KSG   + +++N+L+N+Y K G    AR LFD   +  + 
Sbjct: 22  KSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAF 81

Query: 123 SCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEVFKDMRSAG 182
           S N ++  Y K   +++  + FD++P+R  VS+TTMI+G      + +AI V  DM   G
Sbjct: 82  SWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG 141

Query: 183 VAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVCSSLKDAR 242
           + P + T+ +V+++ +    +     +H+ ++KL     V +S +LL+MY  C     A+
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201

Query: 243 RLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFVQMKRLRE 302
            +F  M VR+  SWN M+  +++ G +D A   FE++ ERD+++W +MI GF Q      
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261

Query: 303 ALLMYSAM-RKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDFIQATFI 362
           AL ++S M R S L P+   +  +LSAC     +  G+Q H+ +V  GF     +    I
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321

Query: 363 SFYAACGRIDLA--YLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKDVFSW 422
           S Y+ CG ++ A   ++ + +    +    AL+ G+ K   ++QA+ IF  + ++DV +W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381

Query: 423 STMISGYAQNELPDMALELFHGMVVSDVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCN 482
           + MI GY Q+     A+ LF  MV     PN  T+ ++ S  ++L  L  G+  H     
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441

Query: 483 KAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHANLSL 542
                + ++S A+I MYAK G+I +A   F  IR +  TVS W ++I  LA HGHA  +L
Sbjct: 442 SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVS-WTSMIIALAQHGHAEEAL 501

Query: 543 EIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGCLVDL 602
           E+F  +    ++ + IT++GV  AC HAGLV  G +YF  MK V  + P + HY C+VDL
Sbjct: 502 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 561

Query: 603 LGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGPGR 662
            GRAG L+EA+  I  MP++ DVV WG+LL+ACR H  +++G+ AAE L  LEP +    
Sbjct: 562 FGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAY 621

Query: 663 VLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGV 697
             L+NLY+  G WE+A+ +R++M+  R+ +  G+S +
Sbjct: 622 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657

BLAST of Lsi09G013620 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 394.8 bits (1013), Expect = 1.4e-109
Identity = 240/666 (36.04%), Postives = 348/666 (52.25%), Query Frame = 0

Query: 38  NLSSFLNGRPSSSCLDYELSLVSALKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLI 97
           +LSSF +  P +  LD      S +KS    SAI+  + +H  V+KSGF++  FI N LI
Sbjct: 12  DLSSFTDSSPFAKLLD------SCIKS--KLSAIYV-RYVHASVIKSGFSNEIFIQNRLI 71

Query: 98  NMYVKCGLFSDARLLFDSCSVLDSVSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTT 157
           + Y KCG   D R +FD     +  + N ++ G  KL  L+ A  LF  MPER   ++ +
Sbjct: 72  DAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNS 131

Query: 158 MILGLAQNDCWREAIEVFKDMRSAGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLH 217
           M+ G AQ+D   EA+  F  M   G   NE + ASV+SACS + D+     +H+L+ K  
Sbjct: 132 MVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSP 191

Query: 218 FFDLVLISTNLLHMYCVCSSLKDARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFE 277
           F   V I + L+ MY  C ++ DA+R+F EM  RN VSWN                    
Sbjct: 192 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWN-------------------- 251

Query: 278 RIPERDVISWATMIDGFVQMKRLREALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDE 337
                      ++I  F Q     EAL ++  M +S + P+EV +  ++SAC    +I  
Sbjct: 252 -----------SLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKV 311

Query: 338 GRQFHALVVKNGFVCYDFIQA-TFISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFT 397
           G++ H  VVKN  +  D I +  F+  YA C RI  A   +      ++I+  ++I G+ 
Sbjct: 312 GQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYA 371

Query: 398 KNRMIDQARKIFDVMPEKDVFSWSTMISGYAQNELPDMALELFHGMVVSDVEPNEITMVS 457
                  AR +F  M E++V SW+ +I+GY QN   + AL LF  +    V P   +  +
Sbjct: 372 MAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 431

Query: 458 VFSAIAALGKLPEGRWAHEYVCNKAIPLNDN------LSAAIIDMYAKCGSINTALDVFH 517
           +  A A L +L  G  AH +V                +  ++IDMY KCG +     VF 
Sbjct: 432 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 491

Query: 518 QIRDKASTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLGACCHAGLV 577
           ++ ++      WNA+I G A +G+ N +LE+F  +     K + IT +GVL AC HAG V
Sbjct: 492 KMMERDCV--SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFV 551

Query: 578 ELGERYFWSMKTVYGVEPNVKHYGCLVDLLGRAGRLREAEGTIRTMPMKADVVIWGTLLA 637
           E G  YF SM   +GV P   HY C+VDLLGRAG L EA+  I  MPM+ D VIWG+LLA
Sbjct: 552 EEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLA 611

Query: 638 ACRTHGEVEIGERAAESLARLEPSHGPGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRS 697
           AC+ H  + +G+  AE L  +EPS+    VLLSN+YA+ G WED   VR++M+ + + + 
Sbjct: 612 ACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQ 635

BLAST of Lsi09G013620 vs. TAIR 10
Match: AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )

HSP 1 Score: 382.1 bits (980), Expect = 9.5e-106
Identity = 214/637 (33.59%), Postives = 342/637 (53.69%), Query Frame = 0

Query: 62  LKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDSCSVLDS 121
           L +CA S A   G QIH +++K G+  + F+ NSL++ Y +CG                 
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG----------------- 200

Query: 122 VSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEV-FKDMRS 181
                         +L++AR++FD+M ER  VS+T+MI G A+ D  ++A+++ F+ +R 
Sbjct: 201 --------------ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 260

Query: 182 AGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVCSSLKD 241
             V PN VTM  V+SAC+ + D+     ++A +         L+ + L+ MY  C+++  
Sbjct: 261 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 320

Query: 242 ARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFVQMKRL 301
           A+RLF E    N    N M   YV+ GL                                
Sbjct: 321 AKRLFDEYGASNLDLCNAMASNYVRQGL-------------------------------T 380

Query: 302 REALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDFIQATF 361
           REAL +++ M  S + P+ + ++  +S+C Q  +I  G+  H  V++NGF  +D I    
Sbjct: 381 REALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 440

Query: 362 ISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKDVFSWS 421
           I  Y  C R D A+  +       +++ N+++ G+ +N  +D A + F+ MPEK++ SW+
Sbjct: 441 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 500

Query: 422 TMISGYAQNELPDMALELFHGMVVSD-VEPNEITMVSVFSAIAALGKLPEGRWAHEYVCN 481
           T+ISG  Q  L + A+E+F  M   + V  + +TM+S+ SA   LG L   +W + Y+  
Sbjct: 501 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 560

Query: 482 KAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHANLSL 541
             I L+  L   ++DM+++CG   +A+ +F+ + ++   VS W A I  +AM G+A  ++
Sbjct: 561 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR--DVSAWTAAIGAMAMAGNAERAI 620

Query: 542 EIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGCLVDL 601
           E+F ++  + +K + + F+G L AC H GLV+ G+  F+SM  ++GV P   HYGC+VDL
Sbjct: 621 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 680

Query: 602 LGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGPGR 661
           LGRAG L EA   I  MPM+ + VIW +LLAACR  G VE+   AAE +  L P      
Sbjct: 681 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 713

Query: 662 VLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGV 697
           VLLSN+YA AG W D + VR +M+ + + + PG S +
Sbjct: 741 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713

BLAST of Lsi09G013620 vs. TAIR 10
Match: AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )

HSP 1 Score: 382.1 bits (980), Expect = 9.5e-106
Identity = 214/637 (33.59%), Postives = 342/637 (53.69%), Query Frame = 0

Query: 62  LKSCASSSAIFPGQQIHVIVLKSGFNSNTFILNSLINMYVKCGLFSDARLLFDSCSVLDS 121
           L +CA S A   G QIH +++K G+  + F+ NSL++ Y +CG                 
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG----------------- 200

Query: 122 VSCNIMIYGYIKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEV-FKDMRS 181
                         +L++AR++FD+M ER  VS+T+MI G A+ D  ++A+++ F+ +R 
Sbjct: 201 --------------ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 260

Query: 182 AGVAPNEVTMASVMSACSHIGDIWNCWMLHALVIKLHFFDLVLISTNLLHMYCVCSSLKD 241
             V PN VTM  V+SAC+ + D+     ++A +         L+ + L+ MY  C+++  
Sbjct: 261 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 320

Query: 242 ARRLFSEMPVRNTVSWNVMLKGYVKSGLLDQARELFERIPERDVISWATMIDGFVQMKRL 301
           A+RLF E    N    N M   YV+ GL                                
Sbjct: 321 AKRLFDEYGASNLDLCNAMASNYVRQGL-------------------------------T 380

Query: 302 REALLMYSAMRKSDLHPNEVMIVDLLSACGQSVSIDEGRQFHALVVKNGFVCYDFIQATF 361
           REAL +++ M  S + P+ + ++  +S+C Q  +I  G+  H  V++NGF  +D I    
Sbjct: 381 REALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 440

Query: 362 ISFYAACGRIDLAYLQYQVSDKSHLISSNALIVGFTKNRMIDQARKIFDVMPEKDVFSWS 421
           I  Y  C R D A+  +       +++ N+++ G+ +N  +D A + F+ MPEK++ SW+
Sbjct: 441 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 500

Query: 422 TMISGYAQNELPDMALELFHGMVVSD-VEPNEITMVSVFSAIAALGKLPEGRWAHEYVCN 481
           T+ISG  Q  L + A+E+F  M   + V  + +TM+S+ SA   LG L   +W + Y+  
Sbjct: 501 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 560

Query: 482 KAIPLNDNLSAAIIDMYAKCGSINTALDVFHQIRDKASTVSPWNAIICGLAMHGHANLSL 541
             I L+  L   ++DM+++CG   +A+ +F+ + ++   VS W A I  +AM G+A  ++
Sbjct: 561 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR--DVSAWTAAIGAMAMAGNAERAI 620

Query: 542 EIFSNLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKTVYGVEPNVKHYGCLVDL 601
           E+F ++  + +K + + F+G L AC H GLV+ G+  F+SM  ++GV P   HYGC+VDL
Sbjct: 621 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 680

Query: 602 LGRAGRLREAEGTIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGPGR 661
           LGRAG L EA   I  MPM+ + VIW +LLAACR  G VE+   AAE +  L P      
Sbjct: 681 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 713

Query: 662 VLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGYSGV 697
           VLLSN+YA AG W D + VR +M+ + + + PG S +
Sbjct: 741 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P0C8Q84.2e-22358.59Pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Arabidop... [more]
Q9SHZ89.3e-11435.16Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... [more]
Q9SIT72.0e-10836.04Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... [more]
Q9LUJ21.3e-10433.59Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... [more]
Q9LN014.3e-10336.12Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A1S4E2270.0e+0089.05pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X1 ... [more]
A0A0A0KC160.0e+0089.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G239150 PE=4 SV=1[more]
A0A6J1H4P40.0e+0088.03pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbit... [more]
A0A6J1L1I90.0e+0087.89pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbit... [more]
A0A1S4E2290.0e+0086.06pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X2 ... [more]
Match NameE-valueIdentityDescription
XP_038876269.10.0e+0092.84pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Benincasa ... [more]
XP_023548174.10.0e+0088.89pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita ... [more]
XP_016902281.10.0e+0089.05PREDICTED: pentatricopeptide repeat-containing protein At5g19020, mitochondrial ... [more]
XP_011657204.10.0e+0089.05pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucumis sa... [more]
KAG6575019.10.0e+0088.03Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
Match NameE-valueIdentityDescription
AT5G19020.13.0e-22458.59mitochondrial editing factor 18 [more]
AT2G22070.16.6e-11535.16pentatricopeptide (PPR) repeat-containing protein [more]
AT2G13600.11.4e-10936.04Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G22690.19.5e-10633.59CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... [more]
AT3G22690.29.5e-10633.59INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 541..601
e-value: 0.0032
score: 17.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 153..198
e-value: 9.4E-10
score: 38.6
coord: 414..460
e-value: 3.1E-9
score: 36.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 417..451
e-value: 1.6E-7
score: 29.0
coord: 122..153
e-value: 7.0E-8
score: 30.2
coord: 285..319
e-value: 1.0E-6
score: 26.5
coord: 254..284
e-value: 1.2E-5
score: 23.1
coord: 153..187
e-value: 7.6E-9
score: 33.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 93..114
e-value: 0.014
score: 15.6
coord: 285..314
e-value: 7.4E-4
score: 19.6
coord: 491..514
e-value: 0.35
score: 11.2
coord: 254..283
e-value: 5.9E-7
score: 29.3
coord: 122..152
e-value: 9.3E-7
score: 28.7
coord: 226..251
e-value: 0.2
score: 12.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 415..449
score: 11.586152
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 252..286
score: 11.717688
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 120..154
score: 11.8273
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 155..185
score: 8.867749
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 490..692
e-value: 1.2E-35
score: 125.4
coord: 61..221
e-value: 5.4E-31
score: 110.1
coord: 222..380
e-value: 1.3E-27
score: 99.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 381..489
e-value: 2.7E-18
score: 68.5
NoneNo IPR availablePANTHERPTHR47929FAMILY NOT NAMEDcoord: 56..132
coord: 130..277
coord: 259..375
coord: 382..695

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G013620.1Lsi09G013620.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0009507 chloroplast
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding