Lsi09G012730 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G012730
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein SIEVE ELEMENT OCCLUSION B-like
Location	chr09: 20525286 .. 20527088 (-)
RNA-Seq Expression	Lsi09G012730
Synteny	Lsi09G012730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATACTTCCTCTATTTCATTGCATTGGAGGACTTTTCCCTAACTCTGCTTTTTTACATCTTCTCAGAGCATTGAAGTATTTTTTTCCAAAAAAATAATTAAAAATAATAATTGCAAACCAGAAACTAGTATAATATTTATTCATGTTATATTACAATTTATTAGGAGGGTATGTATATATAAGAAGGTGCAAATGTGTGTATTTTTTTCAGTTAAGTGTTGAAGAAAGTTTGTCAGGAAAGATTGTGACATTGATAATTTCTAGATTGAATATCTCAGATGGTGATAACAGAGCTTTAAATAACTTTTGTGGTTATTTGAGAAGATTAAACAGTAAATATGAGATGGTTTGGATTCCAATAATCCCAGAGACTGATGATGAAGAAGAAGAAGAAGATAACCGCAAGAAATGTGATTATTTGTGTTCTACAATGACATGGTATTCATTATCATTCCATACGCACATATCTGGCATGAGATATTTTGAAGAGAAGTGGCATCTTAGGGAGGATCCATTAGTTGTGGTACTAAACGAAGACTCTAAAGTGGAATTCATGAATGCAATTCATTTAATTCGTGTTTGGGAAACTGATGCAATCCCTTTTACAAAAAAAAAATATTGATGGTTTACTAAAAAAAAAACTGGCCTGAGTCAACTCTCATCAAATTCACTCACCAACCACGACTACGATATTGGGTATGTATAACAAGTGATATCCCATTTTTAATACATGCTTTTGATTTCTTTTTTCATTCCCCTTTTAGGTTATATTATAAGAAAATACTCTCGAACTTTGTCATTTGTTTGAAAAATACTTACATACTCTCAAAAGTTGCAATATTATTATTGGCCTAATTTCATAAAATTTCAAATAAAAATTGAGACCTGAAACAATGTGATCTAGAAAGGAAATTTGAATCATCACTCTATTCTAGGTCACCAATACACAATTTGTCTCGATTTTGTTTGAAATTCTTATGAACTTCTATTCTAAAGTTAGTTTTGAAATGTTTTTTTCTTTTTTAAAATAAGGGTATTCTTGAAACCAAAGACAAGTTTAAATGCTTCTGTTTTAATTGTTTAAATCTGTTTAGATTGACTTCTTAGTGCTTAAAACAAGTATCTTTAAGCTATAATTAGAAAGTCAATTCAAACAAAACCACCTCTCATGTCGTTTATGTTGATGTACATATATACTCTTTCCAAACAGATCGACCATGGGAAAAACATCCTATTCTATGGAGGAAAAGACCCGATGTGGATCCAACAATTTGAAGATCGAATAAAAATTTTGAAAAGTGATCCTTTGATAATGGAAAAGGGTTCATTTGAAATTGTACGTATAGGAAAAGATGCAAAAGGAAAGGATGATCCAGCACTTATGGCTCATTTTTGGACAACACAATGGAGCTATTTTGCAGTCAGGAGCCAATTGAGAGGTTCACGTGCGAGTGAATCAATAAACGACATCTTAAGATTGATTTCATACCAAAATGAAGATGGTTGGGTTGTTCTAACCGTAGGATCAACCCCAGAGCTAGTTGGGCGTGGGATTTTGATATTGAAATTGCTTAAAGAGTTCCCAAAATGGAAGCAAGATTTAAATCGGATGGACTTCCCTCGTGCCTTTAAAGAATACTTCAATAAATTGGCTCCCAAAAGTCACCAATGTGATCAAGTAGTTCTTCCAAAGTTCAGTGGATGGATTCCTATAGTTGTGAATTGTACTGAATGTGCTGATTTCATGAAGGTTAATATTAGCTTCAAGTGCCGCCATTTGAGGAGCTCAAATGTGATGTGA

mRNA sequence

ATGATACTTCCTCTATTTCATTGCATTGGAGGACTTTTCCCTAACTCTGCTTTTTTACATCTTCTCAGAGCATTGAAGAGGATCGACCATGGGAAAAACATCCTATTCTATGGAGGAAAAGACCCGATGTGGATCCAACAATTTGAAGATCGAATAAAAATTTTGAAAAGTGATCCTTTGATAATGGAAAAGGGTTCATTTGAAATTGTACGTATAGGAAAAGATGCAAAAGGAAAGGATGATCCAGCACTTATGGCTCATTTTTGGACAACACAATGGAGCTATTTTGCAGTCAGGAGCCAATTGAGAGGTTCACGTGCGAGTGAATCAATAAACGACATCTTAAGATTGATTTCATACCAAAATGAAGATGGTTGGGTTGTTCTAACCGTAGGATCAACCCCAGAGCTAGTTGGGCGTGGGATTTTGATATTGAAATTGCTTAAAGAGTTCCCAAAATGGAAGCAAGATTTAAATCGGATGGACTTCCCTCGTGCCTTTAAAGAATACTTCAATAAATTGGCTCCCAAAAGTCACCAATGTGATCAAGTAGTTCTTCCAAAGTTCAGTGGATGGATTCCTATAGTTGTGAATTGTACTGAATGTGCTGATTTCATGAAGGTTAATATTAGCTTCAAGTGCCGCCATTTGAGGAGCTCAAATGTGATGTGA

Coding sequence (CDS)

ATGATACTTCCTCTATTTCATTGCATTGGAGGACTTTTCCCTAACTCTGCTTTTTTACATCTTCTCAGAGCATTGAAGAGGATCGACCATGGGAAAAACATCCTATTCTATGGAGGAAAAGACCCGATGTGGATCCAACAATTTGAAGATCGAATAAAAATTTTGAAAAGTGATCCTTTGATAATGGAAAAGGGTTCATTTGAAATTGTACGTATAGGAAAAGATGCAAAAGGAAAGGATGATCCAGCACTTATGGCTCATTTTTGGACAACACAATGGAGCTATTTTGCAGTCAGGAGCCAATTGAGAGGTTCACGTGCGAGTGAATCAATAAACGACATCTTAAGATTGATTTCATACCAAAATGAAGATGGTTGGGTTGTTCTAACCGTAGGATCAACCCCAGAGCTAGTTGGGCGTGGGATTTTGATATTGAAATTGCTTAAAGAGTTCCCAAAATGGAAGCAAGATTTAAATCGGATGGACTTCCCTCGTGCCTTTAAAGAATACTTCAATAAATTGGCTCCCAAAAGTCACCAATGTGATCAAGTAGTTCTTCCAAAGTTCAGTGGATGGATTCCTATAGTTGTGAATTGTACTGAATGTGCTGATTTCATGAAGGTTAATATTAGCTTCAAGTGCCGCCATTTGAGGAGCTCAAATGTGATGTGA

Protein sequence

MILPLFHCIGGLFPNSAFLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAKGKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPELVGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVVNCTECADFMKVNISFKCRHLRSSNVM

Homology

[Close]

BLAST of Lsi09G012730 vs. ExPASy TrEMBL
Match: A0A0A0LIA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G199900 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 4.2e-79
Identity = 141/199 (70.85%), Postives = 162/199 (81.41%), Query Frame = 0


Query: 18  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAK 77
           F H  R    I   KNILFYGGKDP+WIQQFE+R +IL+SDPLIM+ GSFEIVRIGKDA 
Sbjct: 486 FTHQPRLQNWIARDKNILFYGGKDPLWIQQFEERAEILRSDPLIMDGGSFEIVRIGKDAI 545

Query: 78  GKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPEL 137
           G+DDPALMA FWTTQW YF V+SQ++GS ASE+  DILRLISYQNEDGWVVLTVG+ P L
Sbjct: 546 GQDDPALMARFWTTQWGYFVVKSQIKGSSASETTEDILRLISYQNEDGWVVLTVGTAPVL 605

Query: 138 VGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVV 197
           VGRGILILKLL++FPKWKQ+L    FP  F+EYFN+LA  SHQCD+V+LP FSGWIP++V
Sbjct: 606 VGRGILILKLLEDFPKWKQNLRIKAFPDVFREYFNELAFSSHQCDRVILPGFSGWIPMIV 665

Query: 198 NCTECADFMKVNISFKCRH 217
           NC EC  FM+  IS KC H
Sbjct: 666 NCPECPRFMETGISLKCCH 684

[Close]

BLAST of Lsi09G012730 vs. ExPASy TrEMBL
Match: A0A6J1L5P1 (protein SIEVE ELEMENT OCCLUSION B-like OS=Cucurbita maxima OX=3661 GN=LOC111499360 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.2e-78
Identity = 142/199 (71.36%), Postives = 162/199 (81.41%), Query Frame = 0


Query: 18  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAK 77
           F H  R    I   K+ILFYGGK+PMWIQQFE+R++ILKSDPLI + GSFEIVRIGK+AK
Sbjct: 486 FTHQPRLQSWIKQEKSILFYGGKEPMWIQQFEERVEILKSDPLIRDGGSFEIVRIGKNAK 545

Query: 78  GKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPEL 137
           G+DDPALMA FW  QW YF V+SQL GS ASE+  DILRLISYQNE+GWVVL+VGS P L
Sbjct: 546 GEDDPALMARFWKIQWGYFIVKSQLIGSSASETTEDILRLISYQNEEGWVVLSVGSAPVL 605

Query: 138 VGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVV 197
           VGRGILILKLL+EFPKWKQ L    FP AF+EYFN+LA KSHQCD+V+LP FSGWIP++V
Sbjct: 606 VGRGILILKLLEEFPKWKQSLRLKAFPDAFREYFNELALKSHQCDRVILPGFSGWIPMIV 665

Query: 198 NCTECADFMKVNISFKCRH 217
           NC EC  FM+  ISFKC H
Sbjct: 666 NCPECPRFMETGISFKCCH 684

[Close]

BLAST of Lsi09G012730 vs. ExPASy TrEMBL
Match: A0A5D3E2S2 (Protein SIEVE ELEMENT OCCLUSION B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001770 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.6e-78
Identity = 140/199 (70.35%), Postives = 162/199 (81.41%), Query Frame = 0


Query: 18  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAK 77
           F H  R    I   K+ILFYGGK+P+WIQQFE+R +IL+SDPLIM+ GSFEIVRIGKDA 
Sbjct: 486 FTHQPRLQNWIARDKSILFYGGKNPLWIQQFEERAEILRSDPLIMDGGSFEIVRIGKDAT 545

Query: 78  GKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPEL 137
           G+DDPALMA FWTTQW YF V+SQ++GS ASE+  DILRLISYQNEDGWVVLTVGS P L
Sbjct: 546 GQDDPALMARFWTTQWGYFVVKSQIKGSSASETTEDILRLISYQNEDGWVVLTVGSAPVL 605

Query: 138 VGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVV 197
           VGRGILILKLL+E+PKWKQ L    FP   +EYFN+LA +SHQCD+V+LP FSGWIP++V
Sbjct: 606 VGRGILILKLLEEYPKWKQSLRIKAFPDVVREYFNELALQSHQCDRVILPGFSGWIPMIV 665

Query: 198 NCTECADFMKVNISFKCRH 217
           NC EC  FM+  ISFKC H
Sbjct: 666 NCPECPRFMETGISFKCCH 684

[Close]

BLAST of Lsi09G012730 vs. ExPASy TrEMBL
Match: A0A1S3CNB5 (protein SIEVE ELEMENT OCCLUSION B-like OS=Cucumis melo OX=3656 GN=LOC103502846 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.6e-78
Identity = 140/199 (70.35%), Postives = 162/199 (81.41%), Query Frame = 0


Query: 18  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAK 77
           F H  R    I   K+ILFYGGK+P+WIQQFE+R +IL+SDPLIM+ GSFEIVRIGKDA 
Sbjct: 486 FTHQPRLQNWIARDKSILFYGGKNPLWIQQFEERAEILRSDPLIMDGGSFEIVRIGKDAT 545

Query: 78  GKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPEL 137
           G+DDPALMA FWTTQW YF V+SQ++GS ASE+  DILRLISYQNEDGWVVLTVGS P L
Sbjct: 546 GQDDPALMARFWTTQWGYFVVKSQIKGSSASETTEDILRLISYQNEDGWVVLTVGSAPVL 605

Query: 138 VGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVV 197
           VGRGILILKLL+E+PKWKQ L    FP   +EYFN+LA +SHQCD+V+LP FSGWIP++V
Sbjct: 606 VGRGILILKLLEEYPKWKQSLRIKAFPDVVREYFNELALQSHQCDRVILPGFSGWIPMIV 665

Query: 198 NCTECADFMKVNISFKCRH 217
           NC EC  FM+  ISFKC H
Sbjct: 666 NCPECPRFMETGISFKCCH 684

[Close]

BLAST of Lsi09G012730 vs. ExPASy TrEMBL
Match: I6V4B3 (Sieve element occlusion protein 1 OS=Cucurbita maxima OX=3661 GN=SEO1 PE=2 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.0e-77
Identity = 141/199 (70.85%), Postives = 162/199 (81.41%), Query Frame = 0


Query: 18  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAK 77
           F H  R    I   K+ILFYGGK+PMWIQQFE+R++ILKSDPLI + GSFEIVRIGK+AK
Sbjct: 486 FTHQPRLQSWIKQEKSILFYGGKEPMWIQQFEERVEILKSDPLIRDGGSFEIVRIGKNAK 545

Query: 78  GKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPEL 137
           G+DDPALMA FW  QW YF V+SQL GS ASE+  DILRLISYQNEDGWVVL+VGS P L
Sbjct: 546 GEDDPALMARFWKIQWGYFIVKSQLIGSSASETTEDILRLISYQNEDGWVVLSVGSAPVL 605

Query: 138 VGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVV 197
           VGRGILILKLL+EFPKWKQ L    FP AF++YFN+LA KSHQCD+V+LP FSG+IP++V
Sbjct: 606 VGRGILILKLLEEFPKWKQSLRLKAFPDAFRDYFNELALKSHQCDRVILPGFSGYIPMIV 665

Query: 198 NCTECADFMKVNISFKCRH 217
           NC EC  FM+  ISFKC H
Sbjct: 666 NCPECPRFMETGISFKCCH 684

[Close]

BLAST of Lsi09G012730 vs. NCBI nr
Match: XP_004150431.3 (protein SIEVE ELEMENT OCCLUSION B [Cucumis sativus] >KAE8651830.1 hypothetical protein Csa_006713 [Cucumis sativus])

HSP 1 Score: 306.6 bits (784), Expect = 1.7e-79
Identity = 142/199 (71.36%), Postives = 163/199 (81.91%), Query Frame = 0


Query: 18  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAK 77
           F H  R    I   KNILFYGGKDP+WIQQFE+R +IL+SDPLIM+ GSFEIVRIGKDA 
Sbjct: 486 FTHQPRLQNWIARDKNILFYGGKDPLWIQQFEERAEILRSDPLIMDGGSFEIVRIGKDAI 545

Query: 78  GKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPEL 137
           G+DDPALMA FWTTQW YF V+SQ++GS ASE+  DILRLISYQNEDGWVVLTVG+ P L
Sbjct: 546 GQDDPALMARFWTTQWGYFVVKSQIKGSSASETTEDILRLISYQNEDGWVVLTVGTAPVL 605

Query: 138 VGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVV 197
           VGRGILILKLL++FPKWKQ+L    FP  F+EYFN+LA  SHQCD+V+LP FSGWIP++V
Sbjct: 606 VGRGILILKLLEDFPKWKQNLRIKAFPDVFREYFNELAFSSHQCDRVILPGFSGWIPMIV 665

Query: 198 NCTECADFMKVNISFKCRH 217
           NC EC  FM+  ISFKC H
Sbjct: 666 NCPECPRFMETGISFKCCH 684

[Close]

BLAST of Lsi09G012730 vs. NCBI nr
Match: XP_038906501.1 (LOW QUALITY PROTEIN: protein SIEVE ELEMENT OCCLUSION B-like [Benincasa hispida])

HSP 1 Score: 303.1 bits (775), Expect = 1.9e-78
Identity = 140/199 (70.35%), Postives = 161/199 (80.90%), Query Frame = 0


Query: 18  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAK 77
           F H  R    I   KNILFYGGK+P+WIQQFE+R++IL++DPLIM+ GSFEIVRIGKDA 
Sbjct: 492 FTHQPRLQNWIKQEKNILFYGGKEPLWIQQFEERVEILRNDPLIMDGGSFEIVRIGKDAT 551

Query: 78  GKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPEL 137
           G+DDPALMA FWT QW YF V+SQL GS ASE+  DILRLISYQNEDGWVVL+VGS P L
Sbjct: 552 GEDDPALMARFWTAQWGYFVVKSQLIGSSASETTEDILRLISYQNEDGWVVLSVGSAPVL 611

Query: 138 VGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVV 197
           VGRGILILKLL EFPKWKQ L    FP  F++YFN+LA K+HQCD+V+LP FSGWIP++V
Sbjct: 612 VGRGILILKLLDEFPKWKQSLRLKAFPDVFRDYFNELALKNHQCDRVILPGFSGWIPMIV 671

Query: 198 NCTECADFMKVNISFKCRH 217
           NC EC  FM+  ISFKC H
Sbjct: 672 NCPECPRFMETGISFKCCH 690

[Close]

BLAST of Lsi09G012730 vs. NCBI nr
Match: XP_023006703.1 (protein SIEVE ELEMENT OCCLUSION B-like [Cucurbita maxima])

HSP 1 Score: 302.8 bits (774), Expect = 2.5e-78
Identity = 142/199 (71.36%), Postives = 162/199 (81.41%), Query Frame = 0


Query: 18  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAK 77
           F H  R    I   K+ILFYGGK+PMWIQQFE+R++ILKSDPLI + GSFEIVRIGK+AK
Sbjct: 486 FTHQPRLQSWIKQEKSILFYGGKEPMWIQQFEERVEILKSDPLIRDGGSFEIVRIGKNAK 545

Query: 78  GKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPEL 137
           G+DDPALMA FW  QW YF V+SQL GS ASE+  DILRLISYQNE+GWVVL+VGS P L
Sbjct: 546 GEDDPALMARFWKIQWGYFIVKSQLIGSSASETTEDILRLISYQNEEGWVVLSVGSAPVL 605

Query: 138 VGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVV 197
           VGRGILILKLL+EFPKWKQ L    FP AF+EYFN+LA KSHQCD+V+LP FSGWIP++V
Sbjct: 606 VGRGILILKLLEEFPKWKQSLRLKAFPDAFREYFNELALKSHQCDRVILPGFSGWIPMIV 665

Query: 198 NCTECADFMKVNISFKCRH 217
           NC EC  FM+  ISFKC H
Sbjct: 666 NCPECPRFMETGISFKCCH 684

[Close]

BLAST of Lsi09G012730 vs. NCBI nr
Match: XP_008465183.1 (PREDICTED: protein SIEVE ELEMENT OCCLUSION B-like [Cucumis melo] >KAA0057490.1 protein SIEVE ELEMENT OCCLUSION B-like [Cucumis melo var. makuwa] >TYK30184.1 protein SIEVE ELEMENT OCCLUSION B-like [Cucumis melo var. makuwa])

HSP 1 Score: 302.4 bits (773), Expect = 3.3e-78
Identity = 140/199 (70.35%), Postives = 162/199 (81.41%), Query Frame = 0


Query: 18  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAK 77
           F H  R    I   K+ILFYGGK+P+WIQQFE+R +IL+SDPLIM+ GSFEIVRIGKDA 
Sbjct: 486 FTHQPRLQNWIARDKSILFYGGKNPLWIQQFEERAEILRSDPLIMDGGSFEIVRIGKDAT 545

Query: 78  GKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPEL 137
           G+DDPALMA FWTTQW YF V+SQ++GS ASE+  DILRLISYQNEDGWVVLTVGS P L
Sbjct: 546 GQDDPALMARFWTTQWGYFVVKSQIKGSSASETTEDILRLISYQNEDGWVVLTVGSAPVL 605

Query: 138 VGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVV 197
           VGRGILILKLL+E+PKWKQ L    FP   +EYFN+LA +SHQCD+V+LP FSGWIP++V
Sbjct: 606 VGRGILILKLLEEYPKWKQSLRIKAFPDVVREYFNELALQSHQCDRVILPGFSGWIPMIV 665

Query: 198 NCTECADFMKVNISFKCRH 217
           NC EC  FM+  ISFKC H
Sbjct: 666 NCPECPRFMETGISFKCCH 684

[Close]

BLAST of Lsi09G012730 vs. NCBI nr
Match: AFN06074.1 (sieve element occlusion protein 1 [Cucurbita maxima])

HSP 1 Score: 299.7 bits (766), Expect = 2.1e-77
Identity = 141/199 (70.85%), Postives = 162/199 (81.41%), Query Frame = 0


Query: 18  FLHLLRALKRIDHGKNILFYGGKDPMWIQQFEDRIKILKSDPLIMEKGSFEIVRIGKDAK 77
           F H  R    I   K+ILFYGGK+PMWIQQFE+R++ILKSDPLI + GSFEIVRIGK+AK
Sbjct: 486 FTHQPRLQSWIKQEKSILFYGGKEPMWIQQFEERVEILKSDPLIRDGGSFEIVRIGKNAK 545

Query: 78  GKDDPALMAHFWTTQWSYFAVRSQLRGSRASESINDILRLISYQNEDGWVVLTVGSTPEL 137
           G+DDPALMA FW  QW YF V+SQL GS ASE+  DILRLISYQNEDGWVVL+VGS P L
Sbjct: 546 GEDDPALMARFWKIQWGYFIVKSQLIGSSASETTEDILRLISYQNEDGWVVLSVGSAPVL 605

Query: 138 VGRGILILKLLKEFPKWKQDLNRMDFPRAFKEYFNKLAPKSHQCDQVVLPKFSGWIPIVV 197
           VGRGILILKLL+EFPKWKQ L    FP AF++YFN+LA KSHQCD+V+LP FSG+IP++V
Sbjct: 606 VGRGILILKLLEEFPKWKQSLRLKAFPDAFRDYFNELALKSHQCDRVILPGFSGYIPMIV 665

Query: 198 NCTECADFMKVNISFKCRH 217
           NC EC  FM+  ISFKC H
Sbjct: 666 NCPECPRFMETGISFKCCH 684

The following BLAST results are available for this feature:

BLAST of Lsi09G012730 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi09G012730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIA4	4.2e-79	70.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G199900 PE=4 SV=1	[more]
A0A6J1L5P1	1.2e-78	71.36	protein SIEVE ELEMENT OCCLUSION B-like OS=Cucurbita maxima OX=3661 GN=LOC1114993...	[more]
A0A5D3E2S2	1.6e-78	70.35	Protein SIEVE ELEMENT OCCLUSION B-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CNB5	1.6e-78	70.35	protein SIEVE ELEMENT OCCLUSION B-like OS=Cucumis melo OX=3656 GN=LOC103502846 P...	[more]
I6V4B3	1.0e-77	70.85	Sieve element occlusion protein 1 OS=Cucurbita maxima OX=3661 GN=SEO1 PE=2 SV=1	[more]

BLAST of Lsi09G012730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150431.3	1.7e-79	71.36	protein SIEVE ELEMENT OCCLUSION B [Cucumis sativus] >KAE8651830.1 hypothetical p...	[more]
XP_038906501.1	1.9e-78	70.35	LOW QUALITY PROTEIN: protein SIEVE ELEMENT OCCLUSION B-like [Benincasa hispida]	[more]
XP_023006703.1	2.5e-78	71.36	protein SIEVE ELEMENT OCCLUSION B-like [Cucurbita maxima]	[more]
XP_008465183.1	3.3e-78	70.35	PREDICTED: protein SIEVE ELEMENT OCCLUSION B-like [Cucumis melo] >KAA0057490.1 p...	[more]
AFN06074.1	2.1e-77	70.85	sieve element occlusion protein 1 [Cucurbita maxima]	[more]

BLAST of Lsi09G012730 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027944	Sieve element occlusion, C-terminal	PFAM	PF14577	SEO_C	coord: 25..215 e-value: 3.7E-26 score: 92.0
IPR039299	Protein SIEVE ELEMENT OCCLUSION	PANTHER	PTHR33232	PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE	coord: 26..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G012730.1	Lsi09G012730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010088	phloem development