Lsi09G012210 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi09G012210
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionperoxisomal membrane protein PMP22
Locationchr09: 19624481 .. 19631369 (-)
RNA-Seq ExpressionLsi09G012210
SyntenyLsi09G012210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTAAGGGGGAATCATTCACATGATTCGTTTTGAGAGAGAGGGTTCCGTCTCGGCCGACCGACGTCCGACCCCCAGTCCCAAAACCCTCTCAACGTTCAAAGTCAAAACATCCCCATTTTTAAATTCAATTTCGTTAATTCGTATTCTTATTCTTCAATCCTTCATCTCCGATTCCAAGCATCTTCTCCTTATTCTTTCGATCTGAGAAAATCCCAACTCATTGTTTCTTCCTTCTTCACAAATCTCAAAGTAAAGAAAAAAATGTCTTCTATAGTCACCGATGCTTGGAAAGGATATCTGCTGCAACTTCAGAAGAATCCTCTTAGAACTAAGGTCAGTTTCATCATCACTCTAAATCAATCTGATTAAGTTTGTTTTAAGGGTCTGTTTTAACTTTTTAACTTTGTTTTTAGGCAATCACTGCTGGGGTTTTAGCTGGGGTCAGCGACACAGTGGCCCAGAAGATTTCTGGGATCAAAAAGCTTCAATTCAGACGATTGCTTCTTTTAATGGTACTATCTTTTCTCTGTTTTTATTCGAGATGTTACTTTAGTTGATGTTTAGTTTCGCGTCCTTTTAATTTTGTTAAGATCGAAACAGAGGACAGTATTTTAGAATTTTTGGTTTGTAGCTCTATGGCTTTGCTTATGCTGGACCGTTTGGGCACTTTTTGCACAAATTGATGGATAGAATTTTCAAGGGGAAGAAAGGAAATACTACTGTTGCAAAGAAGGTTTATATCTATTTCTACTTAATTTTTTTTTGTACTAACTCTTTAATCTTTCTTTGTTATTTTATTAGCTGTTTTCTGTGGTTGTATTGATGGCTGGAAGTGCTGTATTTGTTAGGTGTTATTGGAACAATTGACTAGCTCTCCTTGGAACAATTTATTTTTCATGATGTATTATGGTTTGGTAGTTGAAGGTAAGCAAATCTGCAATTACTTTCTGTTCTTTTTGTTGTTGATTTTGATTTTGTTGTCCAACTTCAGCTTTGAATGTTGATTATCTCTTAATGGTTTCTGAAAATTGTACTTGTACTTGTTTTCTATATTTTCTTGACAATGATTTTCATCTTTGTTAAGGAAATGTATGAATTCTTAGCCAAATTTAAAAAATTATCTTTTAAAGCCCCGTTTGTTAACCATTTGATTTTTAGTTTTTTGTTCACCTCTAAATTTCTTGATTTTTTATATACTTTTTACCAATGTTTTAAAAAATCAAGTTAAAACTTGAAAATTAAAAAAAAAAACTTTTTTAAAAACTTTTTTTTTTTTTTGGAATTTGGCTAAGAATTCAACTTTTGTACTTAGAAATAAGAAATTGAGAGGAAATAAGCTTAATTAAAAAAAACAAAATAGTTACCAATTGGGGCCTAGTTTCCAGAAACTTGCCTTTTCTTTTTGGAATTTGACTAATAATTCAAATGTATCTTTAAGAAATACGAACACCATAACCATAATTTGACAAACCATAACGGTTTCTAGCCGCCATGAATCCCACGACTCAGCCTCCCTTCGCCGCCTTCCCCAATCGCTCTATCCTCATTTATTGGAAATTTTTTTCCATCCAATTTGAAAAATTCAGCAATGGCCACTATGTGAAGATATCAGAACAAGGGAACCTCTCTCATAAAGCTCTTGATTGGCTTGCCTCCTCCTTCAATGCTTTATATAGAGACCCCTGCAACTTCAAGTCTTTTAAGAAATTCACGGATGACGGTGCAACATTTTGGTTAGAGAAACACAGTAACAAGAATGGGTATTTCGTCGAGCTCACACAACTGTATAATTTTGGTCGGCGCACCAAGATCTTCATCCCCTCTAAGGAAAATAAACAAGGCTGGTTCTCTTTCTTCTTTTTGGTTTCTGATGATTACCCAGGCGTGTTCGAGCTGCCGTCTCCAAAACCATCTTCATATTGTGTTGCGATTCAGGGTAAGCTCATCGATAATTCCTCACAACCTGTGGATTCTTGGAAGCAATACTCTGATTACAGCTGAAAAAGGGAACCAACCGAAATGGAGTCCCTTATATAGGGAACTAGCTGGTCTAACTAACAAAGGAAGTGTCCGGTTGAACAAGTAACTGGTTTACCAATAACATCTAAAGAAAACTACAGCTGGATTAAAACAACTAAAGAACAAGGTATGTTCGTACATCAAATCCCTCCCCCTAGAAAGAATAACACGTCCTTGAGTTAAGTAGCTAAGGAGAAGTCATTTTGAGCATGGTATTCAAATATATCAGCTATGTTGAAGGTTGGACTTATTTGAAGATCTGACAGTAGGTCCAACTTGCAAGCGTTTTCTCCAAATTTTTCCAGAATTGGGAATGGTCCCATCTTTTTGTTGGTTAGTTTATTATGAAGGCCAGTCGATAATCTAGAATTCTTTAGGTGAACCATTACTAGATTACCGACCACAAATGTTTAGGCCGGCGATGAGAGTCTGCAGCTTCTTTATATCGAGCGTTTGAAGTTTCCAAGTGAGCACGAACCTCTTCATGGATGTCCATAATTCTTTTAGCCATAAAATTTGCCTCCACTAAGATCAACATTAGAAGGTAGATCAGATAGATCTAAAGTAATTCTAGGTAAACGAGTATAAACGACCTCGAATGGGGACTTCCCTATTGAATGATTTGCCATGTGGTTGAATAAGAATTCTGCTTGAGCAAGAGCAAGGTTCCATTGTTTGGATTTTTCACCACTTAAGCATCAAATCAAGTTACCTAGTGTTTGGTTGGTTACTTCCGCTTGCCCATTAGTTTGGGGGTGGCTAGTTGTACTAAAAGTAGACCTATACCAAAGTTTTTCCATAAGGACTTCTAGTAAAAAAACTCATAAATTTTCCATCTCTATCAAAAACTATAGACTTTGGTATTCCATGTAAATGGACAATTTCTTTGAAAAAAAGATTTGCTATATTTAAAGCATGTAAATGGTTTTGTCTCTTCCTCTTCTTCATCTTAGTAGCCAAAGAAATAGCATCAGCAAGTTGAGCTAAAGGATGTAAATTAACTACCCTTTTGATGTCTTCTCTCAAACCAAAGACAAATCTTGCGATTTGTTGTTTCTCATTTACTGGTAAGTTGTTTCTTGCGCCCAATCGATGAAATTCCTCGGTGTAATCAGTAATAGATTGGTCTCCTTGGCGGCATTGTTGGTACTTACTATATAGGACTTGTTGATAATTCATAGGGAGGAATTGTTTCTTCATTAATCTCAGCATTTTAGGTACGGATGGGTGGTTTGCCATAATACCTTCGATTGTTCTCAATTTGTTCCCACCAAGCCGACGCCCCGCTTTGAAGTTTGTAGGCTACTAGACTTACTTTCTTCTTCTCGGCAGTGTTATTATATGCATAGAAGTTTTCCACGTTTTTCACCCAATCTAAGAATCTCTCAATGTCCATTCGACCATTAAAAGGTGGAAGACCCATTTTAATCTTGTAATTCGGTTGATCTGGGATTTCTTGGTCTCCTTTCGATCTTCTTGGGTTTCTTGAGCGAACTTCTTGAAACATCTTTTCTTCTTCTTTGGATGAATTTGAATCATCCACCATGAATCTGGGTGTTATTAATGAGCCTGATGCTTTATGGGGCAATTTTATTGTGACTAAGTACTATTCACCATCTTGTGTTTGGCCTGCTATTGTCCGGGGTGGCTCTTGTATATCTCCTTGGCGTTTTATTTCTCAGACCATTGATTTGATTGTACACAAATTCGTGTTGGTAATGGCACTTCTATTTCTTTATGAAAGGATCCATGGCTAGGTTGTGGTATTCTTTGCAATTCCTTTCTTCGTTTATTTCGTCTTGCGCTTCAACCTGATTTTACTATGGCTAATGCTTGGGTAGCTAACACTGAAGCTTAGGATTTGTGCCTTCGCCATAATCTCAATGATTTGGAGACTATTGAATGGGCTTCTCTATTCCATATTTTATCATCGATCAGGTTATGTACCATATCTAATTCTTGGTCTTGGACTTTGGATTCCTCATGGTCCTTCTCTATCAAATCCCTTTTAGATGATATGGTTGGGGTGGTTGAGCCGCCTGTCAAAGACCTCTATTCTATTATTTGGAAAGATTTTTATCCAAAGAAGATAGAAATTTTCCTTTGGGAGCTCAATCTTGGTGTGGTCAATACAGCAGATCAGATTCAGTGCAGGATGCCTGATATGTCTCTTTTGTCCTCTTGGTGTATTATGTGTCAATGTCATAAAGAATCTCCAACTCATCTCTTTGTGCACTGGTCTTTTGCTTCCTGGTTTTGGCACATTGTTTTGGAGGCTTTTGGTTGGTTCCTGACATGCTCTAACCATATTTTTGATATTTTGGCATCTTTTATGGTGGGTCATCCTTTTGGTGATACTAAAAGATTGATGTGGTTGGCTCTTACGCGTGCTTTCTTTTGGACCCTTTGATGTGAGTGCAGTGGTCGTATTTTTAAGGATTCTTACTCTTTCGATAGATTTATGGATACGGTTTTGTTTACTACTTTTTATTGGTGCAAGGATAAGCACCCTTTTAATCATTTCAGTTTATCTTATTTAGTCTCCAATTGAAAATGCTTCTTGTAATTGCCTATTGGCTTTTGGGGTTTCCCCTATTCCATTAATTTTTATCTAAAAAAAAAAGAATAGTAAGTAAATAAATATAAATTTCAAAAACTAATAACGAAATCGTTATCATACATGACCTAAAAGTAGTTTTATTTGAGCAAAACAATAGTTCTTAAATGTCATGTTGGCTAAAACGTGAACAATTGTGTTCAATGAACCTACTGACACTAAAGTTTATAATTTCAGGAAGACCATGGAGTTTAGTCAAGACTAAAGTTCGGAAGGACTACCCAACTATTCAGTTGACTGCTTGGCGGGTATAGAAAACAAACCTTTTTGGTAATCATTTGTTTTTTTGTTTTTTTTAAAAATTAAGCTTATTTTTTCTTAATTTCTTACATTAATTTGTATATTTCTTATATAAAAGAGTTGAAATGTTAGCCAAATTCCAAAAACAAAAACAAGTTTTTTAAAACTACTTTTTTAAGTTTTCAAAATTTGGCTTTTGGTATTTGAAAACATTGGTAAAAGATAGATAACAACGCAGGAAACTTAGAGGTAAAAGGAGTGTTTATAGGCTTAATCATTTGTTTTTTTATTTGTTTTTTTTAAAATTAAGCTTATTTTTTCTTAATTTCTTACTGTAATATGTATACTTCTTATGTAAAAGAGTTGAATTCTTAGCCAAATTCCAAAAATAAAAACAAGTTTTTTAAAACTACTTTTTTTAAGTTTTCAAAATTTGGCTTGGTTTTTGAAACCATTGGTAGAAAATGGATAACAAAGCTGGAAACTTAGAGGTAGAAGGAGTGTTTATAAGCTTAATTTTTAAAACTAAAAACTAAAAAATCAAATGGTTACCAAACGGGGCCTTCACTTTTTTGTTTTATTTGGTTTTGTATTACTGTTATAATTGAAGAAAGCTCCTAGTAAATTAGATAATAAGAATGAGATGTTTTGCTTATGACTTGCAGTTCTGGCCCATCGTTGGTTGGGTGAATTACCAGTACATGCCTCTGCAGTTTCGAGTGATATTTCATAGCTTTGTTGCTTCATGCTGGTGAGACTTTCTTTCAAAGACCACCATGTTATAAATCTGAATAATTTACAGCAAAAAAGGAGTTAATGTTCTTGAACTCTAGGGGATAAAATATATAATATAAGTTTTCTTACGTAGAAGAGAGATCCTTATAAATAAAGAAAGAGTAACGGTGAAAAACAAAAATATTGACAATGAATATTTTGATTAAAAGAAAAGGAAATTCCAACAATTGTTTATACCATCTGACTTGATTATGATATGTTACTTCTATGGTTGTATTATATGTCCTTCCACCATAATTTGGATGATGCAAAATCAACAGTTATTCTATGCTTTTAGCCCTCGTTCAGAATCAGAGAAGAAACTGCTAGACATTGTTTTGTACTATGTATCAACTCCTTGTCAGTCCTTATCAAAATTGTCATTTGTTCCAAAATATTCCTATTTCTTTTTAAAAATTGCAATACTGCCCTTTAACATTTAATAAATGCTTTAGAACTAAACTACCATTGAAGTAGAAATTCATTACAATGTTTGGATGAAAATTGGGACTTGGAACAAAACAGGTGTGTTGAATCCATTGGGGCAGACTAATGTTCAGGTCTGATCAATTTCCAAAGATCCAAATCCCAATTTTCATCAAACATTCAAATAGAGTTCTACCGCAAGGGTAGTTTAGTTTAAAAACGTTTATGAAAAATAGTGATATTTTAGAAATTAGAGGAAAAAGAATATTGTGATTTGATGTTTTACAAAACTGAGGCTAAGAATTGTGTTTTCTGGTTTCAGGGGAATCTTTCTGAATCTGAAAGCAAGAACAGTTGCGGTGAAGGCAGCATAAATTGAACCAAATGTCTCCCTTCCCCATAATTTCTCTGATTTAAAGCCTTTAAATCTCTCAAACCGTAAAAGAAGAAAAATGGGGATGCTGAATTACTTTGGTTAGTGTAGAATCCATTAGCTTTTGATTTAAGCTGTAGCTGCTGATCATGCTCTGATTTTGACTCACCTAAAAATAAAACACATTTTCTTTTTTGTCTTTTATTCATTTCAGTGTGTTTGAAATACAGAAATAGTATTATTTCAGTCTTCACCAGACGGAATTAATCAACATCATATATATACAGATATGCATATTTGTAGTTACATCTTTGCTAGTGACGTTTGTCTCGTAAAAACCCTTCAATTTCTATTAATCCCAATTCAATTTAACTCATAATACTAATTTCGAGATTGATAGTATGAGAACTATGTAATTGAGTTGGGTTTATTTTGGT

mRNA sequence

ATTTTAAGGGGGAATCATTCACATGATTCGTTTTGAGAGAGAGGGTTCCGTCTCGGCCGACCGACGTCCGACCCCCAGTCCCAAAACCCTCTCAACGTTCAAAGTCAAAACATCCCCATTTTTAAATTCAATTTCGTTAATTCGTATTCTTATTCTTCAATCCTTCATCTCCGATTCCAAGCATCTTCTCCTTATTCTTTCGATCTGAGAAAATCCCAACTCATTGTTTCTTCCTTCTTCACAAATCTCAAAGTAAAGAAAAAAATGTCTTCTATAGTCACCGATGCTTGGAAAGGATATCTGCTGCAACTTCAGAAGAATCCTCTTAGAACTAAGGCAATCACTGCTGGGGTTTTAGCTGGGGTCAGCGACACAGTGGCCCAGAAGATTTCTGGGATCAAAAAGCTTCAATTCAGACGATTGCTTCTTTTAATGCTCTATGGCTTTGCTTATGCTGGACCGTTTGGGCACTTTTTGCACAAATTGATGGATAGAATTTTCAAGGGGAAGAAAGGAAATACTACTGTTGCAAAGAAGTTCTGGCCCATCGTTGGTTGGGTGAATTACCAGTACATGCCTCTGCAGTTTCGAGTGATATTTCATAGCTTTGTTGCTTCATGCTGGGGAATCTTTCTGAATCTGAAAGCAAGAACAGTTGCGGTGAAGGCAGCATAAATTGAACCAAATGTCTCCCTTCCCCATAATTTCTCTGATTTAAAGCCTTTAAATCTCTCAAACCGTAAAAGAAGAAAAATGGGGATGCTGAATTACTTTGGTTAGTGTAGAATCCATTAGCTTTTGATTTAAGCTGTAGCTGCTGATCATGCTCTGATTTTGACTCACCTAAAAATAAAACACATTTTCTTTTTTGTCTTTTATTCATTTCAGTGTGTTTGAAATACAGAAATAGTATTATTTCAGTCTTCACCAGACGGAATTAATCAACATCATATATATACAGATATGCATATTTGTAGTTACATCTTTGCTAGTGACGTTTGTCTCGTAAAAACCCTTCAATTTCTATTAATCCCAATTCAATTTAACTCATAATACTAATTTCGAGATTGATAGTATGAGAACTATGTAATTGAGTTGGGTTTATTTTGGT

Coding sequence (CDS)

ATGTCTTCTATAGTCACCGATGCTTGGAAAGGATATCTGCTGCAACTTCAGAAGAATCCTCTTAGAACTAAGGCAATCACTGCTGGGGTTTTAGCTGGGGTCAGCGACACAGTGGCCCAGAAGATTTCTGGGATCAAAAAGCTTCAATTCAGACGATTGCTTCTTTTAATGCTCTATGGCTTTGCTTATGCTGGACCGTTTGGGCACTTTTTGCACAAATTGATGGATAGAATTTTCAAGGGGAAGAAAGGAAATACTACTGTTGCAAAGAAGTTCTGGCCCATCGTTGGTTGGGTGAATTACCAGTACATGCCTCTGCAGTTTCGAGTGATATTTCATAGCTTTGTTGCTTCATGCTGGGGAATCTTTCTGAATCTGAAAGCAAGAACAGTTGCGGTGAAGGCAGCATAA

Protein sequence

MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGVSDTVAQKISGIKKLQFRRLLLLMLYGFAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARTVAVKAA
Homology
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BLAST of Lsi09G012210 vs. ExPASy Swiss-Prot
Match: Q9ZS51 (Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana OX=3702 GN=PMP22 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-33
Identity = 77/174 (44.25%), Postives = 100/174 (57.47%), Query Frame = 0 

Query: 12  YLLQLQKNPLRTKAITAGVLAGVSDTVAQKISGIKKLQFRRLLLLMLYGFAYAGPFGHFL 71
           YL QLQ++PLRTKAITAGVL+GVSD V+QK+SGI+K+Q RR+LL +++   + GP GHF 
Sbjct: 14  YLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLGPAGHFF 73

Query: 72  HKLMDRIFKGKKGNTTVAKK---------------------------------------- 131
           H  +D+ FKGKK   TVAKK                                        
Sbjct: 74  HTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRERIKKTY 133

Query: 132 ---------FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARTVAVKAA 137
                    F+P+VGW+NY+Y+PL FRVI HS VA  WGIFL L+AR++ +  A
Sbjct: 134 PTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFWGIFLTLRARSMTLALA 187

[Close]
BLAST of Lsi09G012210 vs. ExPASy Swiss-Prot
Match: Q54GD8 (PXMP2/4 family protein 3 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290223 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.2e-10
Identity = 41/164 (25.00%), Postives = 73/164 (44.51%), Query Frame = 0 

Query: 12  YLLQLQKNPLRTKAITAGVLAGVSDTVAQKISGIKKLQFRRLLLLMLYGFAYAGPFGHFL 71
           Y+ +L+  P++TKA+T+  L+ +S  VAQK    KK+ +  ++   ++G   + P  H+ 
Sbjct: 17  YMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAVVKFTVWGL-ISSPLVHYW 76

Query: 72  HKLMDRIFKGKK------GNTTVAK----------------------------------- 129
           H ++DR+FK  K      G   V +                                   
Sbjct: 77  HIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAFYSVLAILDGKPKSILFKLYFDLFP 136

[Close]
BLAST of Lsi09G012210 vs. ExPASy Swiss-Prot
Match: P42925 (Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-08
Identity = 49/176 (27.84%), Postives = 78/176 (44.32%), Query Frame = 0 

Query: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGVSDTVAQKISGIKK-----LQFRRLLL 60
           + S+   A   YLL L+  P+ TKA+++G+L+ + + +AQ I   ++     L+   LL 
Sbjct: 14  LGSLPKRALAQYLLLLKLYPVLTKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLR 73

Query: 61  LMLYGFAYAGPFGHFLH------------------KLMDRIF----------------KG 120
            ++YG    GP  H+L+                   L+DR+F                +G
Sbjct: 74  YLVYGLFVTGPLSHYLYLFMEYSVPPEVPWASVKRLLLDRLFFAPTFLLLFFFVMNLLEG 133

Query: 121 KKGNTTVAKK---FWPI--VGW--------VNYQYMPLQFRVIFHSFVASCWGIFL 125
           K  +  VAK    FWP   + W        +N  Y+PLQFRV+F +  A  W  +L
Sbjct: 134 KNVSVFVAKMRSGFWPALQMNWRMWTPLQFININYVPLQFRVLFANMAALFWYAYL 189

[Close]
BLAST of Lsi09G012210 vs. ExPASy Swiss-Prot
Match: Q07066 (Peroxisomal membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Pxmp2 PE=1 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 3.0e-08
Identity = 50/176 (28.41%), Postives = 78/176 (44.32%), Query Frame = 0 

Query: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGVSDTVAQKISGIKK-----LQFRRLLL 60
           + S+   A   YLL L+  P+ TKA+++G+L+ + + +AQ I   +K     L+   LL 
Sbjct: 14  LRSLPKRALAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLR 73

Query: 61  LMLYGFAYAGPFGHFLH------------------KLMDRIF----------------KG 120
            ++YG    GP  H+L+                   L+DR+F                +G
Sbjct: 74  YLVYGLFVTGPLSHYLYLFMEYWVPPEVPWARVKRLLLDRLFFAPTFLLLFFFVMNLLEG 133

Query: 121 KKGNTTVAKK---FWPI--VGW--------VNYQYMPLQFRVIFHSFVASCWGIFL 125
           K  +  VAK    FWP   + W        +N  Y+PLQFRV+F +  A  W  +L
Sbjct: 134 KNISVFVAKMRSGFWPALQMNWRMWTPLQFININYVPLQFRVLFANMAALFWYAYL 189

[Close]
BLAST of Lsi09G012210 vs. ExPASy Swiss-Prot
Match: Q54FR4 (PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.1e-08
Identity = 45/164 (27.44%), Postives = 66/164 (40.24%), Query Frame = 0 

Query: 12  YLLQLQKNPLRTKAITAGVLAGVSDTVAQKI----SGIKKLQFRRLLLLMLYGFAYAGPF 71
           YL QL K P+ TKA+T+G L  +SD++ Q I       KK  F+R + + ++GFA  GP 
Sbjct: 15  YLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGFAVTGPL 74

Query: 72  GHFLHKLMDR----------------------------------IFKGKKGNTTVAK--- 125
            H+  K +D+                                  I +GK  +  V K   
Sbjct: 75  FHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLFFSGMGILEGKSKDDIVEKLKK 134

[Close]
BLAST of Lsi09G012210 vs. ExPASy TrEMBL
Match: A0A6J1L1V0 (peroxisomal membrane protein PMP22 OS=Cucurbita maxima OX=3661 GN=LOC111499089 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.8e-62
Identity = 132/185 (71.35%), Postives = 134/185 (72.43%), Query Frame = 0 

Query: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGVSDTVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAG SDTVAQKISGIKKLQ RRLLLLMLYG
Sbjct: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGCSDTVAQKISGIKKLQIRRLLLLMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKK----------------------------- 120
           FAYAGPFGHFLHKLMD+IFKGKKGNTTVAKK                             
Sbjct: 61  FAYAGPFGHFLHKLMDKIFKGKKGNTTVAKKVILEQLTSSPWNNLFFMIYYGLVVEGRPW 120

Query: 121 --------------------FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARTV 137
                               FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKAR+V
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSV 180

[Close]
BLAST of Lsi09G012210 vs. ExPASy TrEMBL
Match: A0A6J1H5B2 (peroxisomal membrane protein PMP22 OS=Cucurbita moschata OX=3662 GN=LOC111460189 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.3e-62
Identity = 131/185 (70.81%), Postives = 134/185 (72.43%), Query Frame = 0 

Query: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGVSDTVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAG SDTVAQKISGIKKLQ RRLLL+MLYG
Sbjct: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGCSDTVAQKISGIKKLQIRRLLLVMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKK----------------------------- 120
           FAYAGPFGHFLHKLMD+IFKGKKGNTTVAKK                             
Sbjct: 61  FAYAGPFGHFLHKLMDKIFKGKKGNTTVAKKVILEQLTSSPWNNLFFMIYYGLVVEGRPW 120

Query: 121 --------------------FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARTV 137
                               FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKAR+V
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSV 180

[Close]
BLAST of Lsi09G012210 vs. ExPASy TrEMBL
Match: A0A5D3BQ13 (Peroxisomal membrane protein PMP22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00350 PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.5e-60
Identity = 126/180 (70.00%), Postives = 131/180 (72.78%), Query Frame = 0 

Query: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGVSDTVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVT+AW+GYLLQLQKNPLRTKAITAGVLAG+SD+VAQKISGIKKLQFRRLLLLMLYG
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKK----------------------------- 120
           FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKK                             
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQLTSSPWNNLFFMMYYGLVVEGRRW 120

Query: 121 --------------------FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARTV 132
                               FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKAR+V
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSV 180

[Close]
BLAST of Lsi09G012210 vs. ExPASy TrEMBL
Match: A0A1S3CDE7 (peroxisomal membrane protein PMP22 OS=Cucumis melo OX=3656 GN=LOC103499432 PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.5e-60
Identity = 126/180 (70.00%), Postives = 131/180 (72.78%), Query Frame = 0 

Query: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGVSDTVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVT+AW+GYLLQLQKNPLRTKAITAGVLAG+SD+VAQKISGIKKLQFRRLLLLMLYG
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKK----------------------------- 120
           FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKK                             
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQLTSSPWNNLFFMMYYGLVVEGRRW 120

Query: 121 --------------------FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARTV 132
                               FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKAR+V
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSV 180

[Close]
BLAST of Lsi09G012210 vs. ExPASy TrEMBL
Match: A0A0A0LNM9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173050 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 7.8e-60
Identity = 125/180 (69.44%), Postives = 131/180 (72.78%), Query Frame = 0 

Query: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGVSDTVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVT+AW+GYLLQLQKNPLRTKAITAGVLAG+SD+VAQKISGIKKLQFRRLLLLMLYG
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKK----------------------------- 120
           FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKK                             
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW 120

Query: 121 --------------------FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARTV 132
                               FWPIVGWVNYQYMP+QFRVIFHSFVASCWGIFLNLKAR+V
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSV 180

[Close]
BLAST of Lsi09G012210 vs. NCBI nr
Match: XP_038906760.1 (peroxisomal membrane protein PMP22 [Benincasa hispida])

HSP 1 Score: 248.1 bits (632), Expect = 4.5e-62
Identity = 132/185 (71.35%), Postives = 135/185 (72.97%), Query Frame = 0 

Query: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGVSDTVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVTDAWKGYLLQLQK+PLRTKAITAGVLAGVSD+VAQKISGIKKLQFRRLLLLMLYG
Sbjct: 1   MSSIVTDAWKGYLLQLQKHPLRTKAITAGVLAGVSDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKK----------------------------- 120
           FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKK                             
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQLTSSPWNNLFFMMYYGLVVEGRPW 120

Query: 121 --------------------FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARTV 137
                               FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKAR+V
Sbjct: 121 SLVKTKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSV 180

[Close]
BLAST of Lsi09G012210 vs. NCBI nr
Match: XP_023006319.1 (peroxisomal membrane protein PMP22 [Cucurbita maxima])

HSP 1 Score: 247.7 bits (631), Expect = 5.9e-62
Identity = 132/185 (71.35%), Postives = 134/185 (72.43%), Query Frame = 0 

Query: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGVSDTVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAG SDTVAQKISGIKKLQ RRLLLLMLYG
Sbjct: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGCSDTVAQKISGIKKLQIRRLLLLMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKK----------------------------- 120
           FAYAGPFGHFLHKLMD+IFKGKKGNTTVAKK                             
Sbjct: 61  FAYAGPFGHFLHKLMDKIFKGKKGNTTVAKKVILEQLTSSPWNNLFFMIYYGLVVEGRPW 120

Query: 121 --------------------FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARTV 137
                               FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKAR+V
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSV 180

[Close]
BLAST of Lsi09G012210 vs. NCBI nr
Match: XP_022959090.1 (peroxisomal membrane protein PMP22 [Cucurbita moschata] >XP_023547635.1 peroxisomal membrane protein PMP22 [Cucurbita pepo subsp. pepo] >KAG6574905.1 Peroxisomal membrane protein PMP22, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013476.1 Peroxisomal membrane protein PMP22 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 246.5 bits (628), Expect = 1.3e-61
Identity = 131/185 (70.81%), Postives = 134/185 (72.43%), Query Frame = 0 

Query: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGVSDTVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAG SDTVAQKISGIKKLQ RRLLL+MLYG
Sbjct: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGCSDTVAQKISGIKKLQIRRLLLVMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKK----------------------------- 120
           FAYAGPFGHFLHKLMD+IFKGKKGNTTVAKK                             
Sbjct: 61  FAYAGPFGHFLHKLMDKIFKGKKGNTTVAKKVILEQLTSSPWNNLFFMIYYGLVVEGRPW 120

Query: 121 --------------------FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARTV 137
                               FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKAR+V
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSV 180

[Close]
BLAST of Lsi09G012210 vs. NCBI nr
Match: XP_008460659.1 (PREDICTED: peroxisomal membrane protein PMP22 [Cucumis melo] >KAA0050714.1 peroxisomal membrane protein PMP22 [Cucumis melo var. makuwa] >TYK01447.1 peroxisomal membrane protein PMP22 [Cucumis melo var. makuwa])

HSP 1 Score: 240.4 bits (612), Expect = 9.4e-60
Identity = 126/180 (70.00%), Postives = 131/180 (72.78%), Query Frame = 0 

Query: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGVSDTVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVT+AW+GYLLQLQKNPLRTKAITAGVLAG+SD+VAQKISGIKKLQFRRLLLLMLYG
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKK----------------------------- 120
           FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKK                             
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQLTSSPWNNLFFMMYYGLVVEGRRW 120

Query: 121 --------------------FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARTV 132
                               FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKAR+V
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSV 180

[Close]
BLAST of Lsi09G012210 vs. NCBI nr
Match: XP_004147155.1 (peroxisomal membrane protein PMP22 [Cucumis sativus] >KGN61586.1 hypothetical protein Csa_006161 [Cucumis sativus])

HSP 1 Score: 239.6 bits (610), Expect = 1.6e-59
Identity = 125/180 (69.44%), Postives = 131/180 (72.78%), Query Frame = 0 

Query: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGVSDTVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVT+AW+GYLLQLQKNPLRTKAITAGVLAG+SD+VAQKISGIKKLQFRRLLLLMLYG
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKK----------------------------- 120
           FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKK                             
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW 120

Query: 121 --------------------FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARTV 132
                               FWPIVGWVNYQYMP+QFRVIFHSFVASCWGIFLNLKAR+V
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSV 180

[Close]
BLAST of Lsi09G012210 vs. TAIR 10
Match: AT4G14305.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 209.5 bits (532), Expect = 1.7e-54
Identity = 108/185 (58.38%), Postives = 121/185 (65.41%), Query Frame = 0 

Query: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGVSDTVAQKISGIKKLQFRRLLLLMLYG 60
           MS +  DAW+ YL+QLQ +PLRTKAITAGVLAG SD +AQKISG+K++QFRRLLLLMLYG
Sbjct: 1   MSDLAKDAWRKYLIQLQAHPLRTKAITAGVLAGCSDAIAQKISGVKRIQFRRLLLLMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAK------------------------------ 120
           FAY GPFGHF HKLMD IFKGKKGN+TVAK                              
Sbjct: 61  FAYGGPFGHFFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPW 120

Query: 121 -------------------KFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARTV 137
                              KFWPIVGWVNYQY+PLQFRV+F SFVASCW IFLNLKAR+ 
Sbjct: 121 KLVKHKLGKDYPTIQLTAWKFWPIVGWVNYQYVPLQFRVLFSSFVASCWSIFLNLKARSP 180

[Close]
BLAST of Lsi09G012210 vs. TAIR 10
Match: AT4G14305.2 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 169.9 bits (429), Expect = 1.5e-42
Identity = 89/157 (56.69%), Postives = 98/157 (62.42%), Query Frame = 0 

Query: 29  GVLAGVSDTVAQKISGIKKLQFRRLLLLMLYGFAYAGPFGHFLHKLMDRIFKGKKGNTTV 88
           GVLAG SD +AQKISG+K++QFRRLLLLMLYGFAY GPFGHF HKLMD IFKGKKGN+TV
Sbjct: 17  GVLAGCSDAIAQKISGVKRIQFRRLLLLMLYGFAYGGPFGHFFHKLMDTIFKGKKGNSTV 76

Query: 89  AK-------------------------------------------------KFWPIVGWV 137
           AK                                                 KFWPIVGWV
Sbjct: 77  AKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPWKLVKHKLGKDYPTIQLTAWKFWPIVGWV 136

[Close]
BLAST of Lsi09G012210 vs. TAIR 10
Match: AT4G04470.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 144.1 bits (362), Expect = 8.5e-35
Identity = 77/174 (44.25%), Postives = 100/174 (57.47%), Query Frame = 0 

Query: 12  YLLQLQKNPLRTKAITAGVLAGVSDTVAQKISGIKKLQFRRLLLLMLYGFAYAGPFGHFL 71
           YL QLQ++PLRTKAITAGVL+GVSD V+QK+SGI+K+Q RR+LL +++   + GP GHF 
Sbjct: 14  YLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLGPAGHFF 73

Query: 72  HKLMDRIFKGKKGNTTVAKK---------------------------------------- 131
           H  +D+ FKGKK   TVAKK                                        
Sbjct: 74  HTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRERIKKTY 133

Query: 132 ---------FWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARTVAVKAA 137
                    F+P+VGW+NY+Y+PL FRVI HS VA  WGIFL L+AR++ +  A
Sbjct: 134 PTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFWGIFLTLRARSMTLALA 187

[Close]
BLAST of Lsi09G012210 vs. TAIR 10
Match: AT3G24570.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 42.0 bits (97), Expect = 4.6e-04
Identity = 27/105 (25.71%), Postives = 47/105 (44.76%), Query Frame = 0 

Query: 9   WKGYLLQLQKNPLRTKAITAGVLAGVSDTVAQKI----------------------SGIK 68
           W+ Y   L  +P++T+ I++G L G  D  AQ I                      + IK
Sbjct: 5   WRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADADAEIK 64

Query: 69  ---------KLQFRRLLLLMLYGFAYAGPFGHFLHKLMDRIFKGK 83
                    K+ ++R+ +  ++GF + GP GHF ++ +D+  K K
Sbjct: 65  VKWKQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLK 109

The following BLAST results are available for this feature:
BLAST of Lsi09G012210 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9ZS511.2e-3344.25Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana OX=3702 GN=PMP22 PE=1... [more]
Q54GD83.2e-1025.00PXMP2/4 family protein 3 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290223 PE... [more]
P429251.7e-0827.84Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2[more]
Q070663.0e-0828.41Peroxisomal membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Pxmp2 PE=1 SV=2[more]
Q54FR45.1e-0827.44PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE... [more]
BLAST of Lsi09G012210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1L1V02.8e-6271.35peroxisomal membrane protein PMP22 OS=Cucurbita maxima OX=3661 GN=LOC111499089 P... [more]
A0A6J1H5B26.3e-6270.81peroxisomal membrane protein PMP22 OS=Cucurbita moschata OX=3662 GN=LOC111460189... [more]
A0A5D3BQ134.5e-6070.00Peroxisomal membrane protein PMP22 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3CDE74.5e-6070.00peroxisomal membrane protein PMP22 OS=Cucumis melo OX=3656 GN=LOC103499432 PE=3 ... [more]
A0A0A0LNM97.8e-6069.44Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173050 PE=3 SV=1[more]
BLAST of Lsi09G012210 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038906760.14.5e-6271.35peroxisomal membrane protein PMP22 [Benincasa hispida][more]
XP_023006319.15.9e-6271.35peroxisomal membrane protein PMP22 [Cucurbita maxima][more]
XP_022959090.11.3e-6170.81peroxisomal membrane protein PMP22 [Cucurbita moschata] >XP_023547635.1 peroxiso... [more]
XP_008460659.19.4e-6070.00PREDICTED: peroxisomal membrane protein PMP22 [Cucumis melo] >KAA0050714.1 perox... [more]
XP_004147155.11.6e-5969.44peroxisomal membrane protein PMP22 [Cucumis sativus] >KGN61586.1 hypothetical pr... [more]
BLAST of Lsi09G012210 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G14305.11.7e-5458.38Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [more]
AT4G14305.21.5e-4256.69Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [more]
AT4G04470.18.5e-3544.25Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [more]
AT3G24570.14.6e-0425.71Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 91..125
e-value: 3.7E-10
score: 39.8
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 1..91
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 90..135
NoneNo IPR availablePANTHERPTHR11266:SF46OS08G0566900 PROTEINcoord: 1..91
coord: 90..135

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G012210.1Lsi09G012210.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016021 integral component of membrane