Lsi09G012030 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G012030
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Peptidyl-prolyl cis-trans isomerase CWC27-like protein
Location	chr09: 19255655 .. 19256945 (-)
RNA-Seq Expression	Lsi09G012030
Synteny	Lsi09G012030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAGTGCTCACAGACCCACTTGCTTGGCCCTGCATTCATTACACCAACGTTATTCTTAACTTTTTTCAAACTACTTTGGAGCCAAATGAGTCTTTTAAAACTCAACATTTTCTTTCCCCTTCTTGCCTGGATGTAACTTCACCAACCATTCCTCAGCTTCTACAGGTTCTGGATGGGGTGTTTTCTTGCTTGTTTCGGGTTTCATAAGCATCGAAAGAAACGCCGACCACCGGCCAATGGAGTCACAATTGCCAACCAAGTAATAGCCTCAACTCTATAAATCTATACTTCATTTGTATGTATGTATTGATGATTCCTTACAATGTTGTCTATCTAAATCCTTTGATAGATACATCTAAGCTATGAGCCTTTAGATTCCTCCCGAATTACAACATGTGATAACAACGAGAAACCTGAGATTCAAAATTCTAAACCAAGGTAGGTGATGAGTGGTTTTCAACTTCCTCTTTCTTCTTTCTTTTTGATTCAACAAAAGTTGAAGATTCGAACATCTGACCTTTTATAGTTGAAGTCGAACTACACTCAAATTGGTGCGGTTGTCGATTTTCAAAATTGGGTTTTGTTCAACTTTGTTTCCCTTTACCATTTGATGCAGATCCTATTTCCTTTTCAGGGATAGAGCTAAGGAGCAGCCTTGGGTCAAAATCAGGAAGAAAGTTAGCTTTAATCTAAACGTCCAGAGCTATGAACCTGTCCCAGATGATCACTATTTCCTAGAGAGTGATGAAGAGGTAAAAACTGAAGAACATTGCCAAGAAACAACAGCTAGAATTGATTCCACTCCACTCCCAAACAATGCATTTACAGCCTCCAATTCAGGAAATTACCCTCAAAACCACAGATACCAGAATTTTGAGGATAGTTATGATGATGAAGAAGAGGATTCTGGAGATGGTGAGAGTGATTTGGATGATAGTGAAATTGATGAAAATCATGATGAGAACAATGATGAATTTAAATCATGTGAACTGGAAACTAGTAGTATTGAAGACAGGAGCCAGCAAGTTCATTCTGTTCTAAAACCAATAGAAAATCTTACTCAATGGAGGACAGCTAAAGCAAAAGCAGGGTCAATCACTAAGCATCAGATGCAAAACAAGATTAAGACATCAAAGCAGGAAAGTTCTCCAGTAATTTTCAGTTCAAACACAAGTTCAATTCAACCACCATTGAAGTCAAGATCAAATTTGTGCTTACCTGATACTCAAATGCAAGAAAATGATCTGGTGCATTCAAGCCTCTCAGATTGGTTGGTCAGAACTGCATAA

mRNA sequence

CAAAAGTGCTCACAGACCCACTTGCTTGGCCCTGCATTCATTACACCAACGTTATTCTTAACTTTTTTCAAACTACTTTGGAGCCAAATGAGTCTTTTAAAACTCAACATTTTCTTTCCCCTTCTTGCCTGGATGTAACTTCACCAACCATTCCTCAGCTTCTACAGGTTCTGGATGGGGTGTTTTCTTGCTTGTTTCGGGTTTCATAAGCATCGAAAGAAACGCCGACCACCGGCCAATGGAGTCACAATTGCCAACCAAATACATCTAAGCTATGAGCCTTTAGATTCCTCCCGAATTACAACATGTGATAACAACGAGAAACCTGAGATTCAAAATTCTAAACCAAGATCCTATTTCCTTTTCAGGGATAGAGCTAAGGAGCAGCCTTGGGTCAAAATCAGGAAGAAAGTTAGCTTTAATCTAAACGTCCAGAGCTATGAACCTGTCCCAGATGATCACTATTTCCTAGAGAGTGATGAAGAGGTAAAAACTGAAGAACATTGCCAAGAAACAACAGCTAGAATTGATTCCACTCCACTCCCAAACAATGCATTTACAGCCTCCAATTCAGGAAATTACCCTCAAAACCACAGATACCAGAATTTTGAGGATAGTTATGATGATGAAGAAGAGGATTCTGGAGATGGTGAGAGTGATTTGGATGATAGTGAAATTGATGAAAATCATGATGAGAACAATGATGAATTTAAATCATGTGAACTGGAAACTAGTAGTATTGAAGACAGGAGCCAGCAAGTTCATTCTGTTCTAAAACCAATAGAAAATCTTACTCAATGGAGGACAGCTAAAGCAAAAGCAGGGTCAATCACTAAGCATCAGATGCAAAACAAGATTAAGACATCAAAGCAGGAAAGTTCTCCAGTAATTTTCAGTTCAAACACAAGTTCAATTCAACCACCATTGAAGTCAAGATCAAATTTGTGCTTACCTGATACTCAAATGCAAGAAAATGATCTGGTGCATTCAAGCCTCTCAGATTGGTTGGTCAGAACTGCATAA

Coding sequence (CDS)

ATGGGGTGTTTTCTTGCTTGTTTCGGGTTTCATAAGCATCGAAAGAAACGCCGACCACCGGCCAATGGAGTCACAATTGCCAACCAAATACATCTAAGCTATGAGCCTTTAGATTCCTCCCGAATTACAACATGTGATAACAACGAGAAACCTGAGATTCAAAATTCTAAACCAAGATCCTATTTCCTTTTCAGGGATAGAGCTAAGGAGCAGCCTTGGGTCAAAATCAGGAAGAAAGTTAGCTTTAATCTAAACGTCCAGAGCTATGAACCTGTCCCAGATGATCACTATTTCCTAGAGAGTGATGAAGAGGTAAAAACTGAAGAACATTGCCAAGAAACAACAGCTAGAATTGATTCCACTCCACTCCCAAACAATGCATTTACAGCCTCCAATTCAGGAAATTACCCTCAAAACCACAGATACCAGAATTTTGAGGATAGTTATGATGATGAAGAAGAGGATTCTGGAGATGGTGAGAGTGATTTGGATGATAGTGAAATTGATGAAAATCATGATGAGAACAATGATGAATTTAAATCATGTGAACTGGAAACTAGTAGTATTGAAGACAGGAGCCAGCAAGTTCATTCTGTTCTAAAACCAATAGAAAATCTTACTCAATGGAGGACAGCTAAAGCAAAAGCAGGGTCAATCACTAAGCATCAGATGCAAAACAAGATTAAGACATCAAAGCAGGAAAGTTCTCCAGTAATTTTCAGTTCAAACACAAGTTCAATTCAACCACCATTGAAGTCAAGATCAAATTTGTGCTTACCTGATACTCAAATGCAAGAAAATGATCTGGTGCATTCAAGCCTCTCAGATTGGTTGGTCAGAACTGCATAA

Protein sequence

MGCFLACFGFHKHRKKRRPPANGVTIANQIHLSYEPLDSSRITTCDNNEKPEIQNSKPRSYFLFRDRAKEQPWVKIRKKVSFNLNVQSYEPVPDDHYFLESDEEVKTEEHCQETTARIDSTPLPNNAFTASNSGNYPQNHRYQNFEDSYDDEEEDSGDGESDLDDSEIDENHDENNDEFKSCELETSSIEDRSQQVHSVLKPIENLTQWRTAKAKAGSITKHQMQNKIKTSKQESSPVIFSSNTSSIQPPLKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA

Homology

[Close]

BLAST of Lsi09G012030 vs. ExPASy TrEMBL
Match: B0F829 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G171920 PE=4 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 9.6e-121
Identity = 231/283 (81.63%), Postives = 247/283 (87.28%), Query Frame = 0


Query: 1   MGCFLACFGFHKHRKKRRPPANGVTIANQIHLSYEPLDSSRITTCDNNEKPEIQNSKPRS 60
           MGCFLACFGFHKHRKKRR P +G+ I +QIHLSYEPLDSS+IT C  N+K E+QNSKP  
Sbjct: 1   MGCFLACFGFHKHRKKRRSPPDGLVIGDQIHLSYEPLDSSQITNCHTNQKLEVQNSKP-- 60

Query: 61  YFLFRDRAKEQPWVKIRKKVSFNLNVQSYEPVPDDHYFLESDEEVKTEEHCQETTARIDS 120
               RDRAKEQPWVKIRKKVSFNLNVQ+YEPVPD  YFLESDEEVK EEHCQETTAR DS
Sbjct: 61  ----RDRAKEQPWVKIRKKVSFNLNVQTYEPVPDYDYFLESDEEVKNEEHCQETTARTDS 120

Query: 121 TPLPNNAFTASNSGNYPQNHRYQNFEDSYDDEE-EDSGDGESDLDDSEIDENHDENNDEF 180
           TPL N AFTASNSG YPQNHRYQN EDSYDDEE +DSG+G+SDLDDSEIDENHDEN DEF
Sbjct: 121 TPLQNKAFTASNSGKYPQNHRYQNCEDSYDDEEDDDSGNGDSDLDDSEIDENHDENKDEF 180

Query: 181 KSCELETSSIEDRSQQVHSVLKPIENLTQWRTAKAKAGSITKHQMQNKIKTSKQESSPVI 240
           +SC LE +S+ +R QQVHSVLKP+ENLTQWRTAKAKAGS TKHQ+QNK KTS Q  SP I
Sbjct: 181 RSCALENNSVVERRQQVHSVLKPVENLTQWRTAKAKAGSFTKHQVQNKNKTSTQAKSPAI 240

Query: 241 FSSNTSSIQPPLKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA 283
            SSNTSSIQP LKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA
Sbjct: 241 SSSNTSSIQPQLKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA 277

[Close]

BLAST of Lsi09G012030 vs. ExPASy TrEMBL
Match: B0F813 (Uncharacterized protein OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.4e-119
Identity = 229/283 (80.92%), Postives = 245/283 (86.57%), Query Frame = 0


Query: 1   MGCFLACFGFHKHRKKRRPPANGVTIANQIHLSYEPLDSSRITTCDNNEKPEIQNSKPRS 60
           MGCFLACFGFHKHRKKRR P +GV I +QIHLSYEPLDSS+IT  D NEK E++NSKP  
Sbjct: 1   MGCFLACFGFHKHRKKRRSPPDGVVIGDQIHLSYEPLDSSQITNSDTNEKLEVKNSKP-- 60

Query: 61  YFLFRDRAKEQPWVKIRKKVSFNLNVQSYEPVPDDHYFLESDEEVKTEEHCQETTARIDS 120
               RDR KEQPWVK+RKKVSFNLNVQ+YEPVPD  YFLESDEEVK EEHCQETTA  DS
Sbjct: 61  ----RDRTKEQPWVKVRKKVSFNLNVQTYEPVPDYDYFLESDEEVKNEEHCQETTATTDS 120

Query: 121 TPLPNNAFTASNSGNYPQNHRYQNFEDSYDDEE-EDSGDGESDLDDSEIDENHDENNDEF 180
           TPL N AFT SNSG YPQNHRYQN EDSYDDEE +DSG+ +SDLDDSEIDENHDENNDEF
Sbjct: 121 TPLQNKAFTTSNSGKYPQNHRYQNCEDSYDDEEDDDSGNCDSDLDDSEIDENHDENNDEF 180

Query: 181 KSCELETSSIEDRSQQVHSVLKPIENLTQWRTAKAKAGSITKHQMQNKIKTSKQESSPVI 240
           +SC LE  +I +R QQVHSVLKP+ENLTQWRTAKAKAGS TKHQ+QNKIKTS Q  SP I
Sbjct: 181 RSCALENDNIVERRQQVHSVLKPVENLTQWRTAKAKAGSFTKHQVQNKIKTSTQAKSPAI 240

Query: 241 FSSNTSSIQPPLKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA 283
           FSSNT+SIQP LKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA
Sbjct: 241 FSSNTTSIQPQLKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA 277

[Close]

BLAST of Lsi09G012030 vs. ExPASy TrEMBL
Match: A0A5D3BAN9 (Peptidyl-prolyl cis-trans isomerase CWC27-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00070 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.8e-119
Identity = 229/283 (80.92%), Postives = 245/283 (86.57%), Query Frame = 0


Query: 1   MGCFLACFGFHKHRKKRRPPANGVTIANQIHLSYEPLDSSRITTCDNNEKPEIQNSKPRS 60
           MGCFLACFGFHKHRKKRR P +GV I +QIHLSYEPLDSS+IT  D NEK E++NSKP  
Sbjct: 1   MGCFLACFGFHKHRKKRRSPPDGVVIGDQIHLSYEPLDSSQITNSDTNEKLEVKNSKP-- 60

Query: 61  YFLFRDRAKEQPWVKIRKKVSFNLNVQSYEPVPDDHYFLESDEEVKTEEHCQETTARIDS 120
               RDR KEQPWVK+RKKVSFNLNVQ+YEPVPD  YFLESDEEVK EEHCQETTA  DS
Sbjct: 61  ----RDRTKEQPWVKVRKKVSFNLNVQTYEPVPDYDYFLESDEEVKNEEHCQETTATTDS 120

Query: 121 TPLPNNAFTASNSGNYPQNHRYQNFEDSYDDEE-EDSGDGESDLDDSEIDENHDENNDEF 180
           TPL N AFT SNSG YPQNHRYQN EDSYDDEE +DSG+ +SDLDDSEIDENHDENNDEF
Sbjct: 121 TPLQNKAFTTSNSGKYPQNHRYQNCEDSYDDEEDDDSGNCDSDLDDSEIDENHDENNDEF 180

Query: 181 KSCELETSSIEDRSQQVHSVLKPIENLTQWRTAKAKAGSITKHQMQNKIKTSKQESSPVI 240
           +SC LE  +I +R QQVHSVLKP+ENLTQWRTAKAKAGS TKHQ+QNKIKTS Q  SP I
Sbjct: 181 RSCVLENDNIVERRQQVHSVLKPVENLTQWRTAKAKAGSFTKHQVQNKIKTSTQAKSPAI 240

Query: 241 FSSNTSSIQPPLKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA 283
           FSSNT+SIQP LKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA
Sbjct: 241 FSSNTTSIQPQLKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA 277

[Close]

BLAST of Lsi09G012030 vs. ExPASy TrEMBL
Match: A0A1S3CE70 (uncharacterized protein LOC103499447 OS=Cucumis melo OX=3656 GN=LOC103499447 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.8e-119
Identity = 229/283 (80.92%), Postives = 245/283 (86.57%), Query Frame = 0


Query: 1   MGCFLACFGFHKHRKKRRPPANGVTIANQIHLSYEPLDSSRITTCDNNEKPEIQNSKPRS 60
           MGCFLACFGFHKHRKKRR P +GV I +QIHLSYEPLDSS+IT  D NEK E++NSKP  
Sbjct: 1   MGCFLACFGFHKHRKKRRSPPDGVVIGDQIHLSYEPLDSSQITNSDTNEKLEVKNSKP-- 60

Query: 61  YFLFRDRAKEQPWVKIRKKVSFNLNVQSYEPVPDDHYFLESDEEVKTEEHCQETTARIDS 120
               RDR KEQPWVK+RKKVSFNLNVQ+YEPVPD  YFLESDEEVK EEHCQETTA  DS
Sbjct: 61  ----RDRTKEQPWVKVRKKVSFNLNVQTYEPVPDYDYFLESDEEVKNEEHCQETTATTDS 120

Query: 121 TPLPNNAFTASNSGNYPQNHRYQNFEDSYDDEE-EDSGDGESDLDDSEIDENHDENNDEF 180
           TPL N AFT SNSG YPQNHRYQN EDSYDDEE +DSG+ +SDLDDSEIDENHDENNDEF
Sbjct: 121 TPLQNKAFTTSNSGKYPQNHRYQNCEDSYDDEEDDDSGNCDSDLDDSEIDENHDENNDEF 180

Query: 181 KSCELETSSIEDRSQQVHSVLKPIENLTQWRTAKAKAGSITKHQMQNKIKTSKQESSPVI 240
           +SC LE  +I +R QQVHSVLKP+ENLTQWRTAKAKAGS TKHQ+QNKIKTS Q  SP I
Sbjct: 181 RSCVLENDNIVERRQQVHSVLKPVENLTQWRTAKAKAGSFTKHQVQNKIKTSTQAKSPAI 240

Query: 241 FSSNTSSIQPPLKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA 283
           FSSNT+SIQP LKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA
Sbjct: 241 FSSNTTSIQPQLKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA 277

[Close]

BLAST of Lsi09G012030 vs. ExPASy TrEMBL
Match: A0A6J1CBT7 (uncharacterized protein LOC111009781 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009781 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.8e-95
Identity = 201/280 (71.79%), Postives = 222/280 (79.29%), Query Frame = 0


Query: 1   MGCFLACFGFHKHRKKRRPPANGVTIANQIHLSYEPLDSSR-ITTCDNNEKPEIQNSKPR 60
           MGCFLACFGF K R+KRR   NG+TI +QIHLSYEPLDSSR I T D   +PEI NSKP 
Sbjct: 1   MGCFLACFGFQKRRRKRRSXPNGLTIGDQIHLSYEPLDSSRVIATSDTCNEPEILNSKPS 60

Query: 61  SYFLFRDRAKEQPWVKIRKKVSFNLNVQSYEPVPDDHYFLESDEEVKTEEHCQETTARID 120
           S  + RD  KEQPWVKIRKKVSFNLN+Q+YEPVPD  YFLESDEEV+TEEH QE TAR D
Sbjct: 61  S--VGRDGPKEQPWVKIRKKVSFNLNIQTYEPVPDYQYFLESDEEVRTEEHHQEATARTD 120

Query: 121 STPLPNNAFTASNSGNYPQNHRYQNFEDSYDDEEEDSGDGESDLDDSEIDENHDENNDEF 180
           ST LP   FT S   NYPQNHRYQN  DS ++EE+D   GESDLDDSEIDE+ +ENNDEF
Sbjct: 121 STSLPEKVFTTS---NYPQNHRYQNCRDSDNEEEDDLSYGESDLDDSEIDEDQEENNDEF 180

Query: 181 KSCELETSSIEDRSQQVHSVLKPIENLTQWRTAKAKAGSITKHQMQNKIKTSKQESSPVI 240
           K CE ET+++E RSQ VHSVLKP+ENLTQWRTAKAK  +ITK Q + KIKTS++  SPV 
Sbjct: 181 KPCESETNTVE-RSQHVHSVLKPVENLTQWRTAKAKTTTITKQQTEIKIKTSEKPQSPVS 240

Query: 241 FSSNTSSIQPPLKSRSNLCLPDTQMQENDLVHSSLSDWLV 280
           FSSN S  QPP KSRS  CLPDTQMQEN LVHSSLSDWLV
Sbjct: 241 FSSNASLTQPPFKSRSKSCLPDTQMQEN-LVHSSLSDWLV 273

[Close]

BLAST of Lsi09G012030 vs. NCBI nr
Match: XP_038874544.1 (uncharacterized protein LOC120067160 [Benincasa hispida])

HSP 1 Score: 469.9 bits (1208), Expect = 1.5e-128
Identity = 244/283 (86.22%), Postives = 262/283 (92.58%), Query Frame = 0


Query: 1   MGCFLACFGFHKHRKKRRPPANGVTIANQIHLSYEPLDSSRITTCDNNEKPEIQNSKPRS 60
           MGCFLACFGFHKHRKK    A+GVTI+NQIHLSYEPLDSS+ITTCD +EK EIQNSKPRS
Sbjct: 1   MGCFLACFGFHKHRKKCHSQADGVTISNQIHLSYEPLDSSQITTCDTSEKLEIQNSKPRS 60

Query: 61  YFLFRDRAKEQPWVKIRKKVSFNLNVQSYEPVPDDHYFLESDEEVKTEEHCQETTARIDS 120
           + LFRDRAKE+PWVKIRKKVSFNLNVQ+YEPVPDD YFLE+D+ VKTEEHCQETTAR DS
Sbjct: 61  HSLFRDRAKEKPWVKIRKKVSFNLNVQTYEPVPDDDYFLENDDVVKTEEHCQETTARTDS 120

Query: 121 TPLPNNAFTASNSGNYPQNHRYQNFEDSYDDEEEDSGDGESDL-DDSEIDENHDENNDEF 180
           TPLPN AFTASNSG YPQNHRYQN ED+YDDEE+DSG+GESD+ DDSE+DENHDENND F
Sbjct: 121 TPLPNKAFTASNSGTYPQNHRYQNCEDNYDDEEDDSGNGESDMDDDSELDENHDENNDVF 180

Query: 181 KSCELETSSIEDRSQQVHSVLKPIENLTQWRTAKAKAGSITKHQMQNKIKTSKQESSPVI 240
           +SCEL+T +I DRSQQVHSVLKPIENLTQWRTAKAKA SITKHQMQNKIKTS+Q  SPVI
Sbjct: 181 RSCELDT-NIVDRSQQVHSVLKPIENLTQWRTAKAKARSITKHQMQNKIKTSEQAKSPVI 240

Query: 241 FSSNTSSIQPPLKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA 283
           FSSNTSSIQ PLKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA
Sbjct: 241 FSSNTSSIQSPLKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA 282

[Close]

BLAST of Lsi09G012030 vs. NCBI nr
Match: XP_004147162.1 (MATH and LRR domain-containing protein PFE0570w [Cucumis sativus] >ABY56099.1 hypothetical protein [Cucumis sativus] >KGN61571.1 hypothetical protein Csa_006733 [Cucumis sativus])

HSP 1 Score: 443.0 bits (1138), Expect = 2.0e-120
Identity = 231/283 (81.63%), Postives = 247/283 (87.28%), Query Frame = 0


Query: 1   MGCFLACFGFHKHRKKRRPPANGVTIANQIHLSYEPLDSSRITTCDNNEKPEIQNSKPRS 60
           MGCFLACFGFHKHRKKRR P +G+ I +QIHLSYEPLDSS+IT C  N+K E+QNSKP  
Sbjct: 1   MGCFLACFGFHKHRKKRRSPPDGLVIGDQIHLSYEPLDSSQITNCHTNQKLEVQNSKP-- 60

Query: 61  YFLFRDRAKEQPWVKIRKKVSFNLNVQSYEPVPDDHYFLESDEEVKTEEHCQETTARIDS 120
               RDRAKEQPWVKIRKKVSFNLNVQ+YEPVPD  YFLESDEEVK EEHCQETTAR DS
Sbjct: 61  ----RDRAKEQPWVKIRKKVSFNLNVQTYEPVPDYDYFLESDEEVKNEEHCQETTARTDS 120

Query: 121 TPLPNNAFTASNSGNYPQNHRYQNFEDSYDDEE-EDSGDGESDLDDSEIDENHDENNDEF 180
           TPL N AFTASNSG YPQNHRYQN EDSYDDEE +DSG+G+SDLDDSEIDENHDEN DEF
Sbjct: 121 TPLQNKAFTASNSGKYPQNHRYQNCEDSYDDEEDDDSGNGDSDLDDSEIDENHDENKDEF 180

Query: 181 KSCELETSSIEDRSQQVHSVLKPIENLTQWRTAKAKAGSITKHQMQNKIKTSKQESSPVI 240
           +SC LE +S+ +R QQVHSVLKP+ENLTQWRTAKAKAGS TKHQ+QNK KTS Q  SP I
Sbjct: 181 RSCALENNSVVERRQQVHSVLKPVENLTQWRTAKAKAGSFTKHQVQNKNKTSTQAKSPAI 240

Query: 241 FSSNTSSIQPPLKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA 283
            SSNTSSIQP LKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA
Sbjct: 241 SSSNTSSIQPQLKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA 277

[Close]

BLAST of Lsi09G012030 vs. NCBI nr
Match: ABY56087.1 (hypothetical protein [Cucumis melo])

HSP 1 Score: 439.1 bits (1128), Expect = 2.9e-119
Identity = 229/283 (80.92%), Postives = 245/283 (86.57%), Query Frame = 0


Query: 1   MGCFLACFGFHKHRKKRRPPANGVTIANQIHLSYEPLDSSRITTCDNNEKPEIQNSKPRS 60
           MGCFLACFGFHKHRKKRR P +GV I +QIHLSYEPLDSS+IT  D NEK E++NSKP  
Sbjct: 1   MGCFLACFGFHKHRKKRRSPPDGVVIGDQIHLSYEPLDSSQITNSDTNEKLEVKNSKP-- 60

Query: 61  YFLFRDRAKEQPWVKIRKKVSFNLNVQSYEPVPDDHYFLESDEEVKTEEHCQETTARIDS 120
               RDR KEQPWVK+RKKVSFNLNVQ+YEPVPD  YFLESDEEVK EEHCQETTA  DS
Sbjct: 61  ----RDRTKEQPWVKVRKKVSFNLNVQTYEPVPDYDYFLESDEEVKNEEHCQETTATTDS 120

Query: 121 TPLPNNAFTASNSGNYPQNHRYQNFEDSYDDEE-EDSGDGESDLDDSEIDENHDENNDEF 180
           TPL N AFT SNSG YPQNHRYQN EDSYDDEE +DSG+ +SDLDDSEIDENHDENNDEF
Sbjct: 121 TPLQNKAFTTSNSGKYPQNHRYQNCEDSYDDEEDDDSGNCDSDLDDSEIDENHDENNDEF 180

Query: 181 KSCELETSSIEDRSQQVHSVLKPIENLTQWRTAKAKAGSITKHQMQNKIKTSKQESSPVI 240
           +SC LE  +I +R QQVHSVLKP+ENLTQWRTAKAKAGS TKHQ+QNKIKTS Q  SP I
Sbjct: 181 RSCALENDNIVERRQQVHSVLKPVENLTQWRTAKAKAGSFTKHQVQNKIKTSTQAKSPAI 240

Query: 241 FSSNTSSIQPPLKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA 283
           FSSNT+SIQP LKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA
Sbjct: 241 FSSNTTSIQPQLKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA 277

[Close]

BLAST of Lsi09G012030 vs. NCBI nr
Match: XP_008460678.1 (PREDICTED: uncharacterized protein LOC103499447 [Cucumis melo] >KAA0050742.1 peptidyl-prolyl cis-trans isomerase CWC27-like protein [Cucumis melo var. makuwa] >TYJ95681.1 Sterile alpha motif domain-containing protein 9-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 438.7 bits (1127), Expect = 3.7e-119
Identity = 229/283 (80.92%), Postives = 245/283 (86.57%), Query Frame = 0


Query: 1   MGCFLACFGFHKHRKKRRPPANGVTIANQIHLSYEPLDSSRITTCDNNEKPEIQNSKPRS 60
           MGCFLACFGFHKHRKKRR P +GV I +QIHLSYEPLDSS+IT  D NEK E++NSKP  
Sbjct: 1   MGCFLACFGFHKHRKKRRSPPDGVVIGDQIHLSYEPLDSSQITNSDTNEKLEVKNSKP-- 60

Query: 61  YFLFRDRAKEQPWVKIRKKVSFNLNVQSYEPVPDDHYFLESDEEVKTEEHCQETTARIDS 120
               RDR KEQPWVK+RKKVSFNLNVQ+YEPVPD  YFLESDEEVK EEHCQETTA  DS
Sbjct: 61  ----RDRTKEQPWVKVRKKVSFNLNVQTYEPVPDYDYFLESDEEVKNEEHCQETTATTDS 120

Query: 121 TPLPNNAFTASNSGNYPQNHRYQNFEDSYDDEE-EDSGDGESDLDDSEIDENHDENNDEF 180
           TPL N AFT SNSG YPQNHRYQN EDSYDDEE +DSG+ +SDLDDSEIDENHDENNDEF
Sbjct: 121 TPLQNKAFTTSNSGKYPQNHRYQNCEDSYDDEEDDDSGNCDSDLDDSEIDENHDENNDEF 180

Query: 181 KSCELETSSIEDRSQQVHSVLKPIENLTQWRTAKAKAGSITKHQMQNKIKTSKQESSPVI 240
           +SC LE  +I +R QQVHSVLKP+ENLTQWRTAKAKAGS TKHQ+QNKIKTS Q  SP I
Sbjct: 181 RSCVLENDNIVERRQQVHSVLKPVENLTQWRTAKAKAGSFTKHQVQNKIKTSTQAKSPAI 240

Query: 241 FSSNTSSIQPPLKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA 283
           FSSNT+SIQP LKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA
Sbjct: 241 FSSNTTSIQPQLKSRSNLCLPDTQMQENDLVHSSLSDWLVRTA 277

[Close]

BLAST of Lsi09G012030 vs. NCBI nr
Match: XP_023513473.1 (uncharacterized protein LOC111778068 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362.1 bits (928), Expect = 4.4e-96
Identity = 199/278 (71.58%), Postives = 221/278 (79.50%), Query Frame = 0


Query: 1   MGCFLACFGFHKHRKKRRPPANGVTIANQIHLSYEPLDSSRITTCDNNEKPEIQNSKPRS 60
           MGCFLACFGFHK RKKRR P +G+T++NQI LSYEPLDSS++TTCD  +KPEIQNSKPR 
Sbjct: 1   MGCFLACFGFHKRRKKRRSPVDGLTVSNQIRLSYEPLDSSQVTTCDVTDKPEIQNSKPR- 60

Query: 61  YFLFRDRAKEQPWVKIRKKVSFNLNVQSYEPVPDDHYFLESDEEVKTEEHCQETTARIDS 120
             + RDR+KEQ WVKIRKKVSFNLNVQ+YEPVPDDHYFLESDEEVKTEEH QE TAR D+
Sbjct: 61  -VVVRDRSKEQAWVKIRKKVSFNLNVQTYEPVPDDHYFLESDEEVKTEEHSQEATARTDT 120

Query: 121 TPLPNNAFTASNSGNYPQNHRYQNFEDSYDDEEEDSGDGESDLDDSEIDENHDENNDEFK 180
           T L +  FT  N GNYPQNHRYQN  DS DDEE+D G GESDL+DSEIDE HD       
Sbjct: 121 TSLLDKEFTTPNPGNYPQNHRYQNCADSCDDEEDDFGYGESDLEDSEIDEEHD------- 180

Query: 181 SCELETSSIEDRSQQVHSVLKPIENLTQWRTAKAKAGSITKHQMQNKIKTSKQESSPVIF 240
             E ET+S+ DRSQQVHSVLKPIENLTQWRTAKAKAG+I+K QM NK+KTS+Q  SP  F
Sbjct: 181 --EFETNSV-DRSQQVHSVLKPIENLTQWRTAKAKAGTISKQQMNNKVKTSEQPQSPAFF 240

Query: 241 SSNTSSIQPPLKSRSNLCLPDTQMQENDLVHSSLSDWL 279
           S N S+    L SR +  LPDTQ QEN  VHSSLSDWL
Sbjct: 241 SLNEST----LNSRLSSSLPDTQKQENP-VHSSLSDWL 261

[Close]

BLAST of Lsi09G012030 vs. TAIR 10
Match: AT2G33400.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04030.1); Has 3875 Blast hits to 2949 proteins in 323 species: Archae - 6; Bacteria - 281; Metazoa - 960; Fungi - 593; Plants - 281; Viruses - 98; Other Eukaryotes - 1656 (source: NCBI BLink). )

HSP 1 Score: 99.4 bits (246), Expect = 5.0e-21
Identity = 81/243 (33.33%), Postives = 127/243 (52.26%), Query Frame = 0


Query: 1   MGCFLACFGFHKHRKKRRPPANGVTIANQIHLSYEPLDSSR----ITTCDNNEKPEIQNS 60
           MGCF+ CFG   + KKRR     +   +Q   SYEPL SS      T  DN EK  I NS
Sbjct: 1   MGCFMGCFGLSSN-KKRRNSIRKILPRDQRICSYEPLLSSDPTDFSTVSDNPEK--ISNS 60

Query: 61  KPRSYFLFRDRAKEQPWVKIRKKVSFNLNVQSYEPVPDDHYFLESDEEVKTEEHCQETTA 120
             RS  +  +  K++   K RK+V F+LNVQ+YEP+    Y     ++ + +    + ++
Sbjct: 61  NLRSE-VGEEEEKKKVTKKTRKRVRFDLNVQTYEPIVPSRYENACSDDEEGKGGRSKGSS 120

Query: 121 RIDSTPLPNNAFTASNSGNYPQNHRYQNFEDSYDDEEEDSGDGESDLDDSEIDENHDENN 180
            ID  P        S+   YP N+RY N  DS++DE+++ G GESDL+D +     +EN+
Sbjct: 121 AIDKKP-----EDLSSRSVYPSNYRYHNCVDSFEDEDDEMGYGESDLEDEDY-YTDNEND 180

Query: 181 DEFKSCELETSSIEDRSQQVHSVLKPIENLTQWRTAKAKAGSITKHQMQNKIKTSKQESS 240
            E  + + +    E+  Q V  +L P+ENL QW+  KA+   + +   +N  +    ++ 
Sbjct: 181 YEDDADDEDEEEEEENEQDVAPLLNPVENLAQWKAVKARPVKVKRVMKENVEEDMDDQAK 233

[Close]

BLAST of Lsi09G012030 vs. TAIR 10
Match: AT5G44040.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 2.0e-14
Identity = 100/345 (28.99%), Postives = 156/345 (45.22%), Query Frame = 0


Query: 1   MGCFLACFGFHKHRKKRRPPANGVTIANQI--HLSYEPLDSSRITTCDN----------N 60
           MGC L CFG  K+R+++R   +     N+I    + + L + R+ T +            
Sbjct: 1   MGCLLGCFGRRKNRRRQRRRESFQPRLNRISEEAAKDVLLNLRVPTVEEVPKYAKDSTVM 60

Query: 61  EKPEIQNSKPRSYFLFRDRAKEQPWVKI---------------------RKKVSFNLNVQ 120
           E P+I    P+   +  +  ++ P V +                     RK+V+F+ NV+
Sbjct: 61  EVPKISEVSPKDNHV--NVVEKVPTVSVTPITDICDKVEEKQSPSPSPNRKRVTFDTNVK 120

Query: 121 SYEPVPDD---HYFLESDEEVKTEEHCQETTARIDSTPLPNNAFTASNSGNYPQNHRYQN 180
           +YE +  D     F E  EEVK+ +      AR  S     +  T+++SG+YP NHRYQN
Sbjct: 121 TYEHIAVDESVELFEEKKEEVKSRQ------ARCSS---EGSDVTSNSSGSYPSNHRYQN 180

Query: 181 FEDSYDDEEEDSGDGESDLDDSEIDE---------NHDENNDEFKSC------------- 240
             +S D+EE+ +   +SDL+D++ D+         N D   D+  +              
Sbjct: 181 CRESDDEEEDVTDCDDSDLEDTDDDDCGLLDDDYYNDDNYEDKLHNWDKVVYTEEIADNV 240

Query: 241 -------ELETSSIEDRSQQVHSVLKPIENLTQWRTAKAKAGSITKHQ--MQNKIKTSKQ 279
                  E  + S+ DRS  V++VL PIENL+QW+  KAK  + T+ Q   +N I  S  
Sbjct: 241 MDIERVEEKGSVSVRDRSGYVNAVLNPIENLSQWKAVKAKGRTTTQTQPRKENVIIASFS 300

[Close]

BLAST of Lsi09G012030 vs. TAIR 10
Match: AT1G04030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44040.1); Has 1835 Blast hits to 1511 proteins in 238 species: Archae - 7; Bacteria - 164; Metazoa - 377; Fungi - 135; Plants - 187; Viruses - 22; Other Eukaryotes - 943 (source: NCBI BLink). )

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-13
Identity = 86/311 (27.65%), Postives = 148/311 (47.59%), Query Frame = 0


Query: 1   MGCFLACFGFHKHRKKRRPPANGVTIANQIHLSYEPLDSSRITTCDNNEKPEIQNSKPRS 60
           MGCF  CFG  K+R+++R   +     N+  LS E  +   +     N++  I    P++
Sbjct: 1   MGCFSGCFGGRKNRRRQRRRDSDEARDNK--LSVETAEPHHL-----NDRVHIVEEIPKA 60

Query: 61  YFL----FRDRAKEQ--PWVKIRKKVSFNLNVQSYEPVPDDHYFLESDEEVKTEEHCQET 120
             +      D A+E+  P    RK+V+F+  V++YE V  +   +E  EE   E   ++ 
Sbjct: 61  SVIPITEICDEAEEKCSPSTISRKRVTFDSKVKTYEHVVSEE-SVELSEEKNEEVESEKR 120

Query: 121 TARIDSTPLPNNAFTASNSGNYPQNHRYQNFEDSYDDEEEDSGD-GESDLDDSE---IDE 180
           + +   T        +++SG+YP+NHRY+N  +S DD EED  D  +SDLD+ E    D 
Sbjct: 121 SLKSSKTDDQIIEVASNSSGSYPENHRYKNCRESDDDIEEDEFDCSDSDLDEDEEYYSDV 180

Query: 181 NHDENNDEFKSCELETSSIEDRSQQVHS-------------------VLKPIENLTQWRT 240
              E++    + E+ T  I D+++++ S                   VL P+ENLTQW++
Sbjct: 181 GFSEDSLHNPTKEVYTQDIGDKTEEIDSKLRRSNETVRDGNHYDGQGVLNPVENLTQWKS 240

Query: 241 AKAKAGSITKHQMQ---NKIKTSKQESSPVIFSSNTSSIQPPLKSRSNLCLPDTQMQEND 279
           AK+K  +  K   +   N I   +++     F ++       L  +    +   +++  +
Sbjct: 241 AKSKGRTKQKQSQKENSNFIADQEEKRDSSSFGTDPQIDDITLSVKPKCRIEPKKLRNQE 300

The following BLAST results are available for this feature:

BLAST of Lsi09G012030 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi09G012030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
B0F829	9.6e-121	81.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G171920 PE=4 SV=1	[more]
B0F813	1.4e-119	80.92	Uncharacterized protein OS=Cucumis melo OX=3656 PE=4 SV=1	[more]
A0A5D3BAN9	1.8e-119	80.92	Peptidyl-prolyl cis-trans isomerase CWC27-like protein OS=Cucumis melo var. maku...	[more]
A0A1S3CE70	1.8e-119	80.92	uncharacterized protein LOC103499447 OS=Cucumis melo OX=3656 GN=LOC103499447 PE=...	[more]
A0A6J1CBT7	1.8e-95	71.79	uncharacterized protein LOC111009781 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Lsi09G012030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874544.1	1.5e-128	86.22	uncharacterized protein LOC120067160 [Benincasa hispida]	[more]
XP_004147162.1	2.0e-120	81.63	MATH and LRR domain-containing protein PFE0570w [Cucumis sativus] >ABY56099.1 hy...	[more]
ABY56087.1	2.9e-119	80.92	hypothetical protein [Cucumis melo]	[more]
XP_008460678.1	3.7e-119	80.92	PREDICTED: uncharacterized protein LOC103499447 [Cucumis melo] >KAA0050742.1 pep...	[more]
XP_023513473.1	4.4e-96	71.58	uncharacterized protein LOC111778068 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi09G012030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33400.1	5.0e-21	33.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G44040.1	2.0e-14	28.99	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G04030.1	1.0e-13	27.65	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..195
None	No IPR available	PANTHER	PTHR33318:SF16	FK506-BINDING NUCLEAR-LIKE PROTEIN	coord: 1..281
IPR039300	Protein JASON	PANTHER	PTHR33318	ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT	coord: 1..281

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G012030.1	Lsi09G012030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007142	male meiosis II