Lsi09G010890 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCGGAAGGCCTTGCATCTTCTACTCATGTAGAGCTCACGAATTTGGAGGTATATGAGTTGTTTCTAGTTTTATTTTACTTTCTATAAATCATTAAGTTTTATAATTTATGATTTTCCTAAATAAATAATTAACCGTATGTTATCTATTAAAATATCTCTAGATATAAATTCGCCAAAATTCAAATTAGGCCCTCACACTTTTTGGTTAAGCTTAAATCATTCCATTGTTAATTAAAATAATTAGTTTTCTCAGTAATCTATAAATTGGGTTGATGCTTTTTTTTTCTCCTAAAAAGAAAAATTGGGTTGATGTTTTATTTAATTTCAATTTGTATATTTGGATTATTTATTGTTTTACAGTATTTTCTAACGAGATCCCAATGAAGATTTAGAATTATTTTAATTATTAACTATATTATTATTTTTTAATACACTTTTTTTTTGTTTGAATTTCAGGATTTTGATTATATGGATTTGATTAATAATCTATGTCATTTTGATAAGCTTAGGATAGACTGTGAGAGGGCATTGCCCACTCGACCTCCTTCGTCTATGTATCCCCGTGGAGATCAAAGGTATTAAATATATATTTTTACTCTGTTTTAAGTTTATAATTTTTTTGTTTACATTTTTATTCTTTTAAATTAATTAATAATTGATATTGATGCCAAGAATTCTTTTAAGAGGATACTATACCAAAGATTGAAAGTGAGATTTTTTTTTTAAAAAAAAATTAAGGCTGAAAACAAATCTTGAATTAGCTAGGGACTAAATTGAAACAAAATTCAAAATTCAATAGTAAAAATATAATATTTTAAAACTTAAAAGGCCAAATAGAAACTAGACCAACAACGGAGAGAAAAAAATGTATTTTTCCTTAATTTTTATTAATACGGTGAACCTTCAAATTTTCATAGTGTATCTTTTGAGAGGTAATTATTAAGTTAGTATAAATATTATTTTGACTATAATACTTTTGGTTTGACTTATTTTAATATATATATATATATATATATATATATATAACTTTTGTTCATTTTAATCTTTATACTTTTAAAAATTGAAATATCAATTTTGGTCTCTTCATAAAGTGACTAATTTTGTCAATTAATTTTTAATTTTATCTAAATTCTTTCGATACAAAATTTAGCATAACACTTCATTCAAAAGTTTCCATTACGTATAAAATATGTGAGAAAAATTTATAAATATAAATTAAAATAAACAGAACTCATGTTTCATAATCGAATTAAATGCAATTGGTTATTGATCTCACGATTTAAAGTATTAATTATAATAATGGGTTTTATTTATGGTAATTTTGTTTATGTACAGTACTTGGGTTCTCACAAACAATGGATCAGATGCTGAAAATATTTGTACTGAGCTATCTGTTGAGGTAATTATGTGATTTACATAATTAAACACTTCATTTTATACAACAAATTAGGCAACAATTACCAATTAATTAAATTAAATGCAAATATATATATATACACACAATTATTATTATTTTTAGCTCCAAATTTAATTAGTTTCACATTTTTATTGCTCTATTTTTCATATTGCAGAAAAATGATAGCATTGTATATCAAAACTCGGACCATGTTCCATATTCGAATTTCGTGAGCAATGATAAAAATGAAAATCCTAATAATGACGTAAGAAAAAATAAGCAACAGATGTCTTCAAGTGACTCCGTGAATGACAAGAACAATAGTCCTAGTCGTAGTACCAAAAGAAAGAGGTCAAATTTTCTCTTTTCTTCTATCATCATCATCATCATCATCATCATCATCATCATCATCATCATATTAATAATATAATATTAATATGCAGGGAAAAGGAAAAAGTGGAAGATGGAAATAAAGCCAGGCCACGTTGCAATTGCAAGAAAAGCCAGTGCCTAAAACTGTAA ATGTCTTCGGAAGGCCTTGCATCTTCTACTCATGTAGAGCTCACGAATTTGGAGGATTTTGATTATATGGATTTGATTAATAATCTATGTCATTTTGATAAGCTTAGGATAGACTGTGAGAGGGCATTGCCCACTCGACCTCCTTCGTCTATGTATCCCCGTGGAGATCAAAGTACTTGGGTTCTCACAAACAATGGATCAGATGCTGAAAATATTTGTACTGAGCTATCTGTTGAGAAAAATGATAGCATTGTATATCAAAACTCGGACCATGTTCCATATTCGAATTTCGTGAGCAATGATAAAAATGAAAATCCTAATAATGACGTAAGAAAAAATAAGCAACAGATGTCTTCAAGTGACTCCGTGAATGACAAGAACAATAGTCCTAGTCGTAGTACCAAAAGAAAGAGGGAAAAGGAAAAAGTGGAAGATGGAAATAAAGCCAGGCCACGTTGCAATTGCAAGAAAAGCCAGTGCCTAAAACTGTAA ATGTCTTCGGAAGGCCTTGCATCTTCTACTCATGTAGAGCTCACGAATTTGGAGGATTTTGATTATATGGATTTGATTAATAATCTATGTCATTTTGATAAGCTTAGGATAGACTGTGAGAGGGCATTGCCCACTCGACCTCCTTCGTCTATGTATCCCCGTGGAGATCAAAGTACTTGGGTTCTCACAAACAATGGATCAGATGCTGAAAATATTTGTACTGAGCTATCTGTTGAGAAAAATGATAGCATTGTATATCAAAACTCGGACCATGTTCCATATTCGAATTTCGTGAGCAATGATAAAAATGAAAATCCTAATAATGACGTAAGAAAAAATAAGCAACAGATGTCTTCAAGTGACTCCGTGAATGACAAGAACAATAGTCCTAGTCGTAGTACCAAAAGAAAGAGGGAAAAGGAAAAAGTGGAAGATGGAAATAAAGCCAGGCCACGTTGCAATTGCAAGAAAAGCCAGTGCCTAAAACTGTAA MSSEGLASSTHVELTNLEDFDYMDLINNLCHFDKLRIDCERALPTRPPSSMYPRGDQSTWVLTNNGSDAENICTELSVEKNDSIVYQNSDHVPYSNFVSNDKNENPNNDVRKNKQQMSSSDSVNDKNNSPSRSTKRKREKEKVEDGNKARPRCNCKKSQCLKL Homology
BLAST of Lsi09G010890 vs. ExPASy TrEMBL
Match: A0A1S3BY78 (protein tesmin/TSO1-like CXC 2 OS=Cucumis melo OX=3656 GN=LOC103494720 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 3.2e-12 Identity = 69/179 (38.55%), Postives = 94/179 (52.51%), Query Frame = 0
BLAST of Lsi09G010890 vs. ExPASy TrEMBL
Match: A0A0A0KVD1 (CRC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G004800 PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 2.9e-05 Identity = 44/91 (48.35%), Postives = 60/91 (65.93%), Query Frame = 0
BLAST of Lsi09G010890 vs. NCBI nr
Match: XP_038878069.1 (protein tesmin/TSO1-like CXC 2 [Benincasa hispida]) HSP 1 Score: 157.5 bits (397), Expect = 9.6e-35 Identity = 103/180 (57.22%), Postives = 119/180 (66.11%), Query Frame = 0
BLAST of Lsi09G010890 vs. NCBI nr
Match: XP_008454271.1 (PREDICTED: protein tesmin/TSO1-like CXC 2 [Cucumis melo]) HSP 1 Score: 81.6 bits (200), Expect = 6.7e-12 Identity = 69/179 (38.55%), Postives = 94/179 (52.51%), Query Frame = 0
BLAST of Lsi09G010890 vs. NCBI nr
Match: KGN52869.1 (hypothetical protein Csa_014688 [Cucumis sativus]) HSP 1 Score: 58.5 bits (140), Expect = 6.1e-05 Identity = 44/91 (48.35%), Postives = 60/91 (65.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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