Lsi09G010590 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi09G010590
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr09: 16087832 .. 16090925 (+)
RNA-Seq ExpressionLsi09G010590
SyntenyLsi09G010590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTGAAAAATGATTGTGTAAAAGCTCAAGTCTCGAGATTATCATCCAATCAGTTGGGATCCTCAAAAAATGTGAAGCCTTCCCAAGAATTCAATCAGCAACATTAAGATTATCTAATTCTTTTGTTCAATTCAGAAGATGCACTCCCTGTAATTCTCCTCCAAATAGCACTTCATCCTCAATTGATTCTGATGACGATTCAACAGCAAGTGTGAGTAGTGAGGAAGATGAGTTTGATTCTTTAATGCCAGTTCCAGATTCTCAATTCTCAGATGATCATTATGGGGTTACTTTGGAAGGTCTTTTCCAGAATTCAGTAGAGAAGTCATTGATTAAGCCAAACCCAGTAAGTTTCACTCCAATCTCCTTCACAAATTCCTTCTAATCCAAATTCAATTGTGGAAGTTTGTGGAATTCAATTGGATCAAGTCTCTTCACAGATTCCGCATTTGGTGAAGTAAAGCCTTATTTGTTGCACTTTACAATGAAGATTATTTCATGGAATACCAAAGGGCTTGGAGACTTTTCTAAGAGGGTTGCCTTGAAAAAGTTTATTAAGTCAGAATCCTGACTTAGTACTTCTGCAGGAGACCAAAAGAGAGGATTTTGACACTGTCTTCATCAAATCAATATGGAGTTCTAGAGACATTGGATGAAAGGAGGCTACACTTTATCTGTCAATGTTATGACTCACTGCAAGAAGACCTTATGGATTACAAATGTATATGGACCTAATGACTATAAAGAAAGGATATTTATGCGGCCAGAATTGTTATCTGTCTTGTAATATTTCTGATCCGTAGTGCTTGGGAGGTGATTTGAACATAATAAGATGAGCACGTGCATGTTTCCCAGTAGGAAGAACTACCAAAGGAAAGAGAAAATTTAATAATCTCACAGCTACAGCTAGCCTTATGTAGATCCCCCAATCAAATGGTAATTTCACTTGGTATTGAGATAATGTTTCTTCACACTCTCTCATAGATTTTTCTATACCAAAGATTGAGATGACCTATTTGATAATACTAGAGTTTCAAGGCAATCTAGGACAATTTTGGATCATTTCCCATTGTTATTAGAAGCTGGATTTTATGGGGACCATCTCCTTTCTGTTTTTGTAATTGATGGTTGTTACAAAAGGAGAAGCTGGATTTTATGGGGACCATCTCCCAAACTCAATTCAAGACATTAATTTAAATTGGAACACATTTATATCTTATTAGTTTAGTATTTTCAAGATGCTCTAGTATTGTTTTTGTTATGTTCTAGTAATTTTCATTTGTTGCTAAGTTTTTATTTATCTCCTACTTTGTATTTGAACATTAGACTTATTTCATTATTTCAATGAAAAGTCTTGTTTCCGTTTCCAAAAAAAAAACAAAAGAGAGAGAGAGACAGTTTTACCTTATGAATATCAAACTTCAAAGAAAATGACCCTAATGAGCTTTTCTTGCTATCAGGTGCAGCACCAAGTAATCGCATGTTGGTAACTGCATTCATATCCTCTGGTGGTAGTTTTGCTAACTGCCAAGCATTAAGCGTCATCAAGATGTGAAGTATGACCAACAAACAACAAGAGTGTCTTCGTTAAGCAATCTTGTAAAATGATAAATAATTTAATTAATTAATAGCTGCTTGGTTGGAAAGGTTGTCATTTCCTTCTTGGGAGTGGGGCAAACTACTAACCTTCATTAAATTTTGACCTTTCTCGCCCTCAAATTTCTCAGGATATATGGCTGCAAGAATCATCAATAACCGCAACTTATTTTCACGACTTGCATCCTGCAAGGTTGTTCGATGTAGGTTTCATATTCGTATCTCCAATGACATGTACTTAAGAACATTAATATAGTTTCAGTAATCACCTCATTGGTCGTCAAAAATTTTATTACATCTTTTGTTCCTGCGTCTCCAAAAACAAGATCCTGCTCAATTTGTCCTAATTCTCTAAGCCCCTGTTCCTTGATAAACTTGTTTAGTTTTACTGCAATCTGAATTAATAAACTCAAAGTCAGTTCCTAAAAAATCTTCAGAAGTTATTTTCAACTCTTCTGGATATTGAACATATTGCTGAGCAAGAAGGAACGAAGATTCCTTATGCTCCTGGAACATTTTTCAGAACAATTCCTTATGCTCCTGGAACATTTTTCAGTTTCTCAGTACATGTTCGAGAGTGATGGTTAACGTAGAGATTTTAGAAGAAAAGATTTAGGTACACATACATTCATATTGATGTTTGGTTCCAAACTTTTAAAAGGATTTTAGAAGAAAAGATTTAGGTACAAATGATTTTGTAAAAATCATTTTCATACATTCATATTGATGTTTGGTTCCAAACTTTTAAAAGTGATTTTGAATTATTATGCCTGGTTTCAGAAGTGATTTTAGAATTACGAAATTACTAACAATGGAAATTTTTATTTACAAAAAATGGTTAATAGATAAGAAAGGGAAAATTCACTTTTAAAATTTATTAAAAAAAGAAAAAAAACAAACAAACAAAACAAAAAAATGTGGAACTAATTTTGTGGGTGATTCTCGGTCAATCACACCACTAAAAGCACATTTCAATTAACTGTTGAAAAATTAATTTTAACCAATATTTTAGATTTTCCTAAAATCAATTTCATCCTTTGCCAAACATCAATTTTTGAAAGTGGCAAAAGTGATTTTGGCCATGTAAAAATCACTCCCAAACTTACCCTAAGGCTACTTGATGCAGCAGGTTATCAACCACAATACAAAACCAAACCTAAAAAAACTTTAAAACATCATTCCCTCTCCTCCATCTATAAGCTAAAATTGTTTGCTCTATGGAGGGGAAAAGTACCATACAACATTTAGGTCAAAAGTAACATACAAAACATAATTGTTTGTTCTTCTACAAGAAACTAACCTCCACATGTAAGGAGAGCTTTTCAATTTGTTCACTATATTGTGGCAATGCTTGAACCATCTTTTGCAGATCCCGTGTGGAGAGTTCACTACTATTTCTATAGTACAGCAGAAAGTATTTAGGTCAGAAAAGCGACATCATAGTAAAGTAGGCTTGTTTCAGTACCAGATATATAACAAACTGCATGAAACTTAG

mRNA sequence

ATGAAAAGATGCACTCCCTGTAATTCTCCTCCAAATAGCACTTCATCCTCAATTGATTCTGATGACGATTCAACAGCAAGTGTGAGTAGTGAGGAAGATGAGTTTGATTCTTTAATGCCAGTTCCAGATTCTCAATTCTCAGATGATCATTATGGGGTTACTTTGGAAGGTCTTTTCCAGAATTCAGTAGAGAAGTCATTGATTAAGCCAAACCCAATCCCGTGTGGAGAGTTCACTACTATTTCTATAGTACAGCAGAAAGTATTTAGGTCAGAAAAGCGACATCATAGTAAAGTAGGCTTGTTTCAGTACCAGATATATAACAAACTGCATGAAACTTAG

Coding sequence (CDS)

ATGAAAAGATGCACTCCCTGTAATTCTCCTCCAAATAGCACTTCATCCTCAATTGATTCTGATGACGATTCAACAGCAAGTGTGAGTAGTGAGGAAGATGAGTTTGATTCTTTAATGCCAGTTCCAGATTCTCAATTCTCAGATGATCATTATGGGGTTACTTTGGAAGGTCTTTTCCAGAATTCAGTAGAGAAGTCATTGATTAAGCCAAACCCAATCCCGTGTGGAGAGTTCACTACTATTTCTATAGTACAGCAGAAAGTATTTAGGTCAGAAAAGCGACATCATAGTAAAGTAGGCTTGTTTCAGTACCAGATATATAACAAACTGCATGAAACTTAG

Protein sequence

MKRCTPCNSPPNSTSSSIDSDDDSTASVSSEEDEFDSLMPVPDSQFSDDHYGVTLEGLFQNSVEKSLIKPNPIPCGEFTTISIVQQKVFRSEKRHHSKVGLFQYQIYNKLHET
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G010590.1Lsi09G010590.1mRNA