Lsi08G015390 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAACCAAAAAGGCTCAAAATCAAAGCAAATTCATCCGATTCGTTACACTACCCATCAGAGCTTTAGGCAAGGCCAAGGATTTCTATGTAAGAAGCATCATGGATTGTGCTCCCAGAGTCTCTCACGGCTACCCATCTGGCCAATTGCCCATCTTGCCCAAAAGCTACAGCTCCCGCTCTAGCAGATCCAATGAAACCGACGATTTCAGAGAGCTTGTTAAGGCCGCTTCCGTTAGAAGCTTGGACATTAAAGACATCGACGCCGATATTCTTTATCCACGGAGGCTAAGACAGTCCAAGGGACTTCCTAAAAGTTGCAGTGTTGGAATGGGTAGGATTGATGAGGATACTGCTAGCGAATTTGAAGATGGGGTTGAGGAGAAGACTGATTTGGTTTATCCAAGAAGTAAAAGCTACGCTGTGACGAATTCAAAACCTGGGTTTTGA ATGAGAACCAAAAAGGCTCAAAATCAAAGCAAATTCATCCGATTCGTTACACTACCCATCAGAGCTTTAGGCAAGGCCAAGGATTTCTATGTAAGAAGCATCATGGATTGTGCTCCCAGAGTCTCTCACGGCTACCCATCTGGCCAATTGCCCATCTTGCCCAAAAGCTACAGCTCCCGCTCTAGCAGATCCAATGAAACCGACGATTTCAGAGAGCTTGTTAAGGCCGCTTCCGTTAGAAGCTTGGACATTAAAGACATCGACGCCGATATTCTTTATCCACGGAGGCTAAGACAGTCCAAGGGACTTCCTAAAAGTTGCAGTGTTGGAATGGGTAGGATTGATGAGGATACTGCTAGCGAATTTGAAGATGGGGTTGAGGAGAAGACTGATTTGGTTTATCCAAGAAGTAAAAGCTACGCTGTGACGAATTCAAAACCTGGGTTTTGA ATGAGAACCAAAAAGGCTCAAAATCAAAGCAAATTCATCCGATTCGTTACACTACCCATCAGAGCTTTAGGCAAGGCCAAGGATTTCTATGTAAGAAGCATCATGGATTGTGCTCCCAGAGTCTCTCACGGCTACCCATCTGGCCAATTGCCCATCTTGCCCAAAAGCTACAGCTCCCGCTCTAGCAGATCCAATGAAACCGACGATTTCAGAGAGCTTGTTAAGGCCGCTTCCGTTAGAAGCTTGGACATTAAAGACATCGACGCCGATATTCTTTATCCACGGAGGCTAAGACAGTCCAAGGGACTTCCTAAAAGTTGCAGTGTTGGAATGGGTAGGATTGATGAGGATACTGCTAGCGAATTTGAAGATGGGGTTGAGGAGAAGACTGATTTGGTTTATCCAAGAAGTAAAAGCTACGCTGTGACGAATTCAAAACCTGGGTTTTGA MRTKKAQNQSKFIRFVTLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPILPKSYSSRSSRSNETDDFRELVKAASVRSLDIKDIDADILYPRRLRQSKGLPKSCSVGMGRIDEDTASEFEDGVEEKTDLVYPRSKSYAVTNSKPGF Homology
BLAST of Lsi08G015390 vs. ExPASy TrEMBL
Match: A0A1S3BAI0 (uncharacterized protein LOC103487823 OS=Cucumis melo OX=3656 GN=LOC103487823 PE=4 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 3.7e-71 Identity = 138/149 (92.62%), Postives = 144/149 (96.64%), Query Frame = 0
BLAST of Lsi08G015390 vs. ExPASy TrEMBL
Match: A0A0A0LN74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354110 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 1.0e-68 Identity = 134/149 (89.93%), Postives = 140/149 (93.96%), Query Frame = 0
BLAST of Lsi08G015390 vs. ExPASy TrEMBL
Match: A0A5A7UYI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00970 PE=4 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 8.8e-65 Identity = 127/137 (92.70%), Postives = 132/137 (96.35%), Query Frame = 0
BLAST of Lsi08G015390 vs. ExPASy TrEMBL
Match: A0A6J1KUQ7 (uncharacterized protein LOC111496579 OS=Cucurbita maxima OX=3661 GN=LOC111496579 PE=4 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64 Identity = 123/144 (85.42%), Postives = 137/144 (95.14%), Query Frame = 0
BLAST of Lsi08G015390 vs. ExPASy TrEMBL
Match: A0A6J1GH58 (uncharacterized protein LOC111454153 OS=Cucurbita moschata OX=3662 GN=LOC111454153 PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 9.7e-64 Identity = 122/144 (84.72%), Postives = 136/144 (94.44%), Query Frame = 0
BLAST of Lsi08G015390 vs. NCBI nr
Match: XP_038884662.1 (uncharacterized protein LOC120075388 [Benincasa hispida]) HSP 1 Score: 283.9 bits (725), Expect = 8.1e-73 Identity = 141/149 (94.63%), Postives = 145/149 (97.32%), Query Frame = 0
BLAST of Lsi08G015390 vs. NCBI nr
Match: XP_008444532.1 (PREDICTED: uncharacterized protein LOC103487823 [Cucumis melo]) HSP 1 Score: 277.3 bits (708), Expect = 7.6e-71 Identity = 138/149 (92.62%), Postives = 144/149 (96.64%), Query Frame = 0
BLAST of Lsi08G015390 vs. NCBI nr
Match: XP_011649558.1 (uncharacterized protein LOC105434639 [Cucumis sativus] >KGN62434.1 hypothetical protein Csa_018658 [Cucumis sativus]) HSP 1 Score: 269.2 bits (687), Expect = 2.1e-68 Identity = 134/149 (89.93%), Postives = 140/149 (93.96%), Query Frame = 0
BLAST of Lsi08G015390 vs. NCBI nr
Match: KAA0060962.1 (uncharacterized protein E6C27_scaffold501G00970 [Cucumis melo var. makuwa]) HSP 1 Score: 256.1 bits (653), Expect = 1.8e-64 Identity = 127/137 (92.70%), Postives = 132/137 (96.35%), Query Frame = 0
BLAST of Lsi08G015390 vs. NCBI nr
Match: XP_023002833.1 (uncharacterized protein LOC111496579 [Cucurbita maxima]) HSP 1 Score: 255.8 bits (652), Expect = 2.4e-64 Identity = 123/144 (85.42%), Postives = 137/144 (95.14%), Query Frame = 0
BLAST of Lsi08G015390 vs. TAIR 10
Match: AT1G10140.1 (Uncharacterised conserved protein UCP031279 ) HSP 1 Score: 117.9 bits (294), Expect = 7.2e-27 Identity = 77/165 (46.67%), Postives = 99/165 (60.00%), Query Frame = 0
BLAST of Lsi08G015390 vs. TAIR 10
Match: AT1G58420.1 (Uncharacterised conserved protein UCP031279 ) HSP 1 Score: 89.0 bits (219), Expect = 3.6e-18 Identity = 66/172 (38.37%), Postives = 96/172 (55.81%), Query Frame = 0
BLAST of Lsi08G015390 vs. TAIR 10
Match: AT4G37700.1 (unknown protein; Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.5 bits (127), Expect = 1.7e-07 Identity = 46/147 (31.29%), Postives = 78/147 (53.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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