Lsi08G015130 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G015130
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Syntaxin-6_N domain-containing protein
Location	chr08: 23216809 .. 23220482 (-)
RNA-Seq Expression	Lsi08G015130
Synteny	Lsi08G015130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGTTATTCCTCCCCCGCTTTCTATCCTCTATTTTGTTGTCCTCTGTTTTCAGTTGATTGGGTATTCATGGGCCTGTGTCTTTTTCGTTAATGTATCTCAGAATAGAATCGACGTATAGAACGTGGGTACATGCCAAGAAAGATGCCTCCAGCATATGGAACTGTGATGAGCTCGGCAGGGATTTACGCACTGCTCTTGGCACCACCAAATGGCAGGTGATCTCTCCCCTAATTTCCTTCCCTACCCCCACAAGAATTCCCTCTGCGTTTCATACCTTTGGCTAACTAATTTCCTTATCTTAGGTTGAGGCATTTCTCCCCTCTTAGAATCTTTGTTAGTTTCTCTCATATTCTGCTGATCCCCCTCGTACTTTTTCTAAAATAGCTATAACTTGTGATGCCAACGCAGTTAGAGGAGTTTGAACGAGCTGTGAAAGCAAGTTATGTTAATAACACAAATGAAGATGCGAGAGATAGGCACCGGGAATTTATTTTAGCAATTGAGGATCAGATTTCAAAAACTCAAAGTTCATTACAAGAGTTTTCTCAATCAAAGGGAAAACCCCCGATGCCTTGGATGCAGCTGGATGAAGGTGAAAGCGACGAACTTGCGTTGTTTCTTTCAGGACCTTCAGCAGGAGAAAACAAAACTGTTGTTAACAATGTTGTTAGTGACAATGGAAACCCACAAGGGATGGACGAAGAATCAGCACCAGCTTGTTCAATTAATTCTCTTCAATCCGTTGAGCAGGGTTCTCACAACGATGGAGATGAGAAGTCCCATGGACACCGGAGGACAGCTAGCGCTAGTCCTGACATTGGTTCCTGGAAGATTGCAATTTCGGGAGTTGATTTCCCACAATCTCCTCTAGATGGACAAACCCAGAAACTTGTACGAAAGATCCCAAGTTTTTCGGGGTTTTTAAATACTGTTGAGTCTGCATCAAAATTCAAGTGGCCGAAGAATGGCTTTAGGAAGTTGAAAGTAGTCGATAGGGATCAAGAAACTAATTTGGTGTTGTCGCAATCCCCTCAATCAGCTAGGGTATGCATTCTATCTGTTGTTAATATTTCTATTGGTTTTATTTTCCATAATTATGATTATAAGCTAGATGTTCTGGTCTACTTGATTATAGTTTCTGTTCATTTCCGTGTAGGGTATAATTGTTGGATATGCAAGAAATAAGAGTTGCTTAGATAGTTGTGATGATTTTTATGATAAGCAACTCTATGGCTGGTATGGATCTATTCAAAGACAGTTTCAGAGGTATATATATCAAATGCAGTATAGCAGGCCTGTTCGAGCAACACTCTCAACGGTTATTATTATCTCCATTGGTAAGCTTTTCTTTTATCTGTCCGGTTTTATTTTTTGTGGCATATTTTTAATTTTATCTTTTTGTCTCACTCAAGAAGCAATAGGTGTGTATATTAGAATGTTGGAATACAGTTTGATTCATTTTTTATTTTCTGAGAAATGCTATTTTATTAAGTTGTATCTTTGAGTTCCTTTGCATCAAAGTGCTGGAGGAGTGCATGGACAGGTGCCATATAGAGAATGTAGATATGAAGAATGTAGATATGAATGTGGCTCATCATTCTCGTAATAATAGTCTTTTGAAATTCATAAGATATATGAGATTTTTTGTGCATTCCATTTGTTGTTTTAAATTCTTTTGCCCTCTACTTAAATAAATAGCCTTAGTGCCAGAGTTTCTTTTACTTTTTTTTGGATAACAGAGGAACATTTTATAAAAGAAAAGTTACTTATATAAGTTAAATGAATCAACAGGTATCAAATTGAAATGTTACAGGTTGATTGGTTAGACAACTTTTTTTGGATAACATAGGAACATTTTAATAACCCTCTTATATATTACCTTAACTTTTTAGATTCTTCATCTTGAGTGAAAACAGTTTGATTGGTTATCATTAATCGGTTATGCATTCTTCCCTAACACTCTCTGCTACACAACATTTTTGGCAGAGTGGTGTAAGATAGCTGGCGCTTTTTTTGTTGTCATGCTGAGGTGTCACTCCTTGTGGTAGACATGATTGGGTTTCCATTCAATTAAATGATTAATGGTCCTTTTTTTCGTTGAGAAGTTGTAAACACATTCTATTCTAGGATTGTGGTTGACTGAACCATTATTGCTTTGGCTCTTTCACCTTTCCTTAGTTAAATATTATTTCATACCATCAGGTTCAAAACTCACCCATCTTTTTTCTCGAAACACTGATCCAACTTGAACTGTTTATGTGAGGCTCCCAATTGATAATATGCGTGTTAGAAGATGTAGGGAAGGGATTTGACCCCCAAATATGACTGATTAGGTTTGGTACCAGTTAAGTCGGTTCTATATTTTGGGAAGTTAGCTCTGGGAGTTGTGTATTTAATAAGGACTTTCAGTTTAAGGGGTGAGACTCTAGCCGTCTCCAAAAGGTTGTGAATGTCATATTTTGAATATATCTTTGATATTTTAATGAGGGTAGATACCTCACAGTTTACACCCATAAATTATAGATATAACCGGATACCACAGAGAATTATCCTCCAGAGAGAACCGTCATAACCACTTTGAGGAGTAAAGTTTTGTTACAATGAGAAATGTTGCTAAAACCAAGACTAACATCCATTTGACAGTTTGACTTTAACACTTCAGAATGATTGATAGATACAATCGATGTTTTGGATTAATTGCTTTGCTTCCCCAGATAGATTCCCTCGAGAGGTAATCCCATCCCACTCTTGAAGGGACTTTTGCTGCTCTTAGAGGAGCAGCCTAGGCAAAGATTGGTAAAGGTCATCTGAGGTTTTCACATCTTTTTTTTTTTTTTTCTTTCTAGAATCCCGATTTTGTTGTGCATAATCTTCCTAAACAGTGAGCCTGTATGGGGAACTTGTGGTAGTTGGATGCTTCATTTCCATATCTGCTGTATTCCCACTGTTGTATCAGTACACCACTAACTCTCAGGATTCCCAAGCGAAAGACCAAACATGGTTTCGTTAAATGGTGGTTCGATCGTAACATTGAATTCTTATATATAGATAATCTATTCTGTTTCCAGAGTGAAACATGTTGCTGTTATTGTTTGGGCGGTTGCTTGACTCTGTTTTGTCATACATCACATTCATATATTTCTTTAGTTCTGATAGATATGGGTGAGAGGAGGGGGGATGCCTTCTTTTCTTTCCTTTTTGGCGCAATTTTCTCAGCAGGGACTTTTGAAGGGCTTATGTCTGTTCTTTCCTTTTGCAGTTTTGGTTATACTCCGTGTGCTGTAAGAAGCTATGTCTCTTCACCAACTTCTTGTAGTGTTATCGGATCAAGAAGTGAAGGGAAATGGACGATGGTCTCGCCATAATGGAGATATCTTTGTTTTGCCGTACCGGTTCTTGTATATTAAACATGTTCTAAGATGTATATGTAGCCATAGTTGAAACCTTAAAGATACTTGAGTCAAGTCACTGTTGTTTACCAAATTGTAGGTGATGAAGAGTGAAGTCTGTATTATTTTCCCCAGAGACAAAAACCTTTCCTTTCTTGATGACACTAACTTATTTTATTTTTATAACCATAAATGAGTAAGTACTAATTTTTAGAGTTATACTTGGACAATGATATTTTGAAACATTATAATAATTTGAATCATATAAGATTTGGTTGTC

mRNA sequence

ATGGGGAATCGACGTATAGAACGTGGGTACATGCCAAGAAAGATGCCTCCAGCATATGGAACTGTGATGAGCTCGGCAGGGATTTACGCACTGCTCTTGGCACCACCAAATGGCAGGTTGAGGCATTTCTCCCCTCTTAGAATCTTTGTTAGTTTCTCTCATATTCTGCTGATCCCCCTCTTAGAGGAGTTTGAACGAGCTGTGAAAGCAAGTTATGTTAATAACACAAATGAAGATGCGAGAGATAGGCACCGGGAATTTATTTTAGCAATTGAGGATCAGATTTCAAAAACTCAAAGTTCATTACAAGAGTTTTCTCAATCAAAGGGAAAACCCCCGATGCCTTGGATGCAGCTGGATGAAGGTGAAAGCGACGAACTTGCGTTGTTTCTTTCAGGACCTTCAGCAGGAGAAAACAAAACTGTTGTTAACAATGTTGTTAGTGACAATGGAAACCCACAAGGGATGGACGAAGAATCAGCACCAGCTTGTTCAATTAATTCTCTTCAATCCGTTGAGCAGGGTTCTCACAACGATGGAGATGAGAAGTCCCATGGACACCGGAGGACAGCTAGCGCTAGTCCTGACATTGGTTCCTGGAAGATTGCAATTTCGGGAGTTGATTTCCCACAATCTCCTCTAGATGGACAAACCCAGAAACTTGTACGAAAGATCCCAAGTTTTTCGGGGTTTTTAAATACTGTTGAGTCTGCATCAAAATTCAAGTGGCCGAAGAATGGCTTTAGGAAGTTGAAAGTAGTCGATAGGGATCAAGAAACTAATTTGGTGTTGTCGCAATCCCCTCAATCAGCTAGGGGTATAATTGTTGGATATGCAAGAAATAAGAGTTGCTTAGATAGTTGTGATGATTTTTATGATAAGCAACTCTATGGCTGGTATGGATCTATTCAAAGACAGTTTCAGAGGTATATATATCAAATGCAGTATAGCAGGCCTGTTCGAGCAACACTCTCAACGAATCCCGATTTTGTTGTGCATAATCTTCCTAAACATTTTGGTTATACTCCGTGTGCTGTAAGAAGCTATGTCTCTTCACCAACTTCTTGTAGTGTTATCGGATCAAGAAGTGAAGGGAAATGGACGATGGTCTCGCCATAATGGAGATATCTTTGTTTTGCCGTACCGGTTCTTGTATATTAAACATGTTCTAAGATGTATATGTAGCCATAGTTGAAACCTTAAAGATACTTGAGTCAAGTCACTGTTGTTTACCAAATTGTAGGTGATGAAGAGTGAAGTCTGTATTATTTTCCCCAGAGACAAAAACCTTTCCTTTCTTGATGACACTAACTTATTTTATTTTTATAACCATAAATGAGTAAGTACTAATTTTTAGAGTTATACTTGGACAATGATATTTTGAAACATTATAATAATTTGAATCATATAAGATTTGGTTGTC

Coding sequence (CDS)

ATGGGGAATCGACGTATAGAACGTGGGTACATGCCAAGAAAGATGCCTCCAGCATATGGAACTGTGATGAGCTCGGCAGGGATTTACGCACTGCTCTTGGCACCACCAAATGGCAGGTTGAGGCATTTCTCCCCTCTTAGAATCTTTGTTAGTTTCTCTCATATTCTGCTGATCCCCCTCTTAGAGGAGTTTGAACGAGCTGTGAAAGCAAGTTATGTTAATAACACAAATGAAGATGCGAGAGATAGGCACCGGGAATTTATTTTAGCAATTGAGGATCAGATTTCAAAAACTCAAAGTTCATTACAAGAGTTTTCTCAATCAAAGGGAAAACCCCCGATGCCTTGGATGCAGCTGGATGAAGGTGAAAGCGACGAACTTGCGTTGTTTCTTTCAGGACCTTCAGCAGGAGAAAACAAAACTGTTGTTAACAATGTTGTTAGTGACAATGGAAACCCACAAGGGATGGACGAAGAATCAGCACCAGCTTGTTCAATTAATTCTCTTCAATCCGTTGAGCAGGGTTCTCACAACGATGGAGATGAGAAGTCCCATGGACACCGGAGGACAGCTAGCGCTAGTCCTGACATTGGTTCCTGGAAGATTGCAATTTCGGGAGTTGATTTCCCACAATCTCCTCTAGATGGACAAACCCAGAAACTTGTACGAAAGATCCCAAGTTTTTCGGGGTTTTTAAATACTGTTGAGTCTGCATCAAAATTCAAGTGGCCGAAGAATGGCTTTAGGAAGTTGAAAGTAGTCGATAGGGATCAAGAAACTAATTTGGTGTTGTCGCAATCCCCTCAATCAGCTAGGGGTATAATTGTTGGATATGCAAGAAATAAGAGTTGCTTAGATAGTTGTGATGATTTTTATGATAAGCAACTCTATGGCTGGTATGGATCTATTCAAAGACAGTTTCAGAGGTATATATATCAAATGCAGTATAGCAGGCCTGTTCGAGCAACACTCTCAACGAATCCCGATTTTGTTGTGCATAATCTTCCTAAACATTTTGGTTATACTCCGTGTGCTGTAAGAAGCTATGTCTCTTCACCAACTTCTTGTAGTGTTATCGGATCAAGAAGTGAAGGGAAATGGACGATGGTCTCGCCATAA

Protein sequence

MGNRRIERGYMPRKMPPAYGTVMSSAGIYALLLAPPNGRLRHFSPLRIFVSFSHILLIPLLEEFERAVKASYVNNTNEDARDRHREFILAIEDQISKTQSSLQEFSQSKGKPPMPWMQLDEGESDELALFLSGPSAGENKTVVNNVVSDNGNPQGMDEESAPACSINSLQSVEQGSHNDGDEKSHGHRRTASASPDIGSWKIAISGVDFPQSPLDGQTQKLVRKIPSFSGFLNTVESASKFKWPKNGFRKLKVVDRDQETNLVLSQSPQSARGIIVGYARNKSCLDSCDDFYDKQLYGWYGSIQRQFQRYIYQMQYSRPVRATLSTNPDFVVHNLPKHFGYTPCAVRSYVSSPTSCSVIGSRSEGKWTMVSP

Homology

[Close]

BLAST of Lsi08G015130 vs. ExPASy TrEMBL
Match: A0A0A0LNV7 (Syntaxin-6_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G354880 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.9e-124
Identity = 229/266 (86.09%), Postives = 244/266 (91.73%), Query Frame = 0


Query: 61  LEEFERAVKASYVNNTNEDARDRHREFILAIEDQISKTQSSLQEFSQSKGKPPMPWMQLD 120
           LEEFERAVKASYVNN+N+DARDRHREFILAIEDQISKTQSS+QE SQSKGKP MPWM+LD
Sbjct: 65  LEEFERAVKASYVNNSNDDARDRHREFILAIEDQISKTQSSVQELSQSKGKPSMPWMRLD 124

Query: 121 EGESDELALFLSGPSAGENKTVVNNVVSDNGNPQGMDEESAPACSINSLQSVEQGSHNDG 180
           EGES+ELA+FLSGPSA ENKT VNNVVS+N NP G +EESAPACSINS Q VEQGSH D 
Sbjct: 125 EGESEELAMFLSGPSAAENKTAVNNVVSNNENPHGKNEESAPACSINSHQPVEQGSHGDR 184

Query: 181 DEKSHGHRRTASASPDIGSWKIAISGVDFPQSPLDGQTQKLVRKIPSFSGFLNTVESASK 240
           DEKSHGHRRTASASPDIGSWKIAISGVDF Q PL+G+TQKLVRKIPSFSGFLN+VESAS 
Sbjct: 185 DEKSHGHRRTASASPDIGSWKIAISGVDFQQCPLNGETQKLVRKIPSFSGFLNSVESASN 244

Query: 241 FKWPKNGFRKLKVVDRDQETNLVLSQSPQSARGIIVGYARNKSCLDSCDDFYDKQLYGWY 300
           FKWPKNGFRKLKV+DR QETN  L QSPQSARGI VGY RNKSCLDSCDDFYDKQLYGWY
Sbjct: 245 FKWPKNGFRKLKVLDRHQETNSKL-QSPQSARGINVGYERNKSCLDSCDDFYDKQLYGWY 304

Query: 301 GSIQRQFQRYIYQMQYSRPVRATLST 327
           GSI+RQFQR IYQMQY+RPV+ TLST
Sbjct: 305 GSIKRQFQRSIYQMQYNRPVQVTLST 329

[Close]

BLAST of Lsi08G015130 vs. ExPASy TrEMBL
Match: A0A1S3BBD8 (uncharacterized protein LOC103487851 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103487851 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 7.9e-123
Identity = 229/267 (85.77%), Postives = 241/267 (90.26%), Query Frame = 0


Query: 60  LLEEFERAVKASYVNNTNEDARDRHREFILAIEDQISKTQSSLQEFSQSKGKPPMPWMQL 119
           +LEEFERAV+ASYVNN+N+DARDRHREFILAI DQISKTQ S+QE SQSKGK   PWMQL
Sbjct: 1   MLEEFERAVEASYVNNSNDDARDRHREFILAIGDQISKTQCSVQELSQSKGKSSRPWMQL 60

Query: 120 DEGESDELALFLSGPSAGENKTVVNNVVSDNGNPQGMDEESAPACSINSLQSVEQGSHND 179
           DEGES+ELA+FLSGPSAGENKT VNNVVS+N  P GMDEESA  CSINS Q VEQGSH+D
Sbjct: 61  DEGESEELAMFLSGPSAGENKTAVNNVVSNNEKPHGMDEESALDCSINSHQPVEQGSHDD 120

Query: 180 GDEKSHGHRRTASASPDIGSWKIAISGVDFPQSPLDGQTQKLVRKIPSFSGFLNTVESAS 239
            +EKSHGHRR ASASPDIGSWKIAISGVDF Q PL+GQTQKLVRKIPSFSGFLNTVESAS
Sbjct: 121 REEKSHGHRRAASASPDIGSWKIAISGVDFQQCPLNGQTQKLVRKIPSFSGFLNTVESAS 180

Query: 240 KFKWPKNGFRKLKVVDRDQETNLVLSQSPQSARGIIVGYARNKSCLDSCDDFYDKQLYGW 299
           KFKWPKNGFRKLKVVDR QETN  L QSPQSARGIIVGY RNKSCLDSCDDFYDKQLYGW
Sbjct: 181 KFKWPKNGFRKLKVVDRHQETNSKL-QSPQSARGIIVGYERNKSCLDSCDDFYDKQLYGW 240

Query: 300 YGSIQRQFQRYIYQMQYSRPVRATLST 327
           YGSIQRQFQR IYQMQYSRPV+ TL T
Sbjct: 241 YGSIQRQFQRSIYQMQYSRPVQVTLLT 266

[Close]

BLAST of Lsi08G015130 vs. ExPASy TrEMBL
Match: A0A5A7V0T6 (t-SNARE OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00730 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 1.3e-122
Identity = 229/266 (86.09%), Postives = 240/266 (90.23%), Query Frame = 0


Query: 61  LEEFERAVKASYVNNTNEDARDRHREFILAIEDQISKTQSSLQEFSQSKGKPPMPWMQLD 120
           LEEFERAV+ASYVNN+N+DARDRHREFILAI DQISKTQ S+QE SQSKGK   PWMQLD
Sbjct: 65  LEEFERAVEASYVNNSNDDARDRHREFILAIGDQISKTQCSVQELSQSKGKSSRPWMQLD 124

Query: 121 EGESDELALFLSGPSAGENKTVVNNVVSDNGNPQGMDEESAPACSINSLQSVEQGSHNDG 180
           EGES+ELA+FLSGPSAGENKT VNNVVS+N  P GMDEESA  CSINS Q VEQGSH+D 
Sbjct: 125 EGESEELAMFLSGPSAGENKTAVNNVVSNNEKPHGMDEESALDCSINSHQPVEQGSHDDR 184

Query: 181 DEKSHGHRRTASASPDIGSWKIAISGVDFPQSPLDGQTQKLVRKIPSFSGFLNTVESASK 240
           +EKSHGHRR ASASPDIGSWKIAISGVDF Q PL+GQTQKLVRKIPSFSGFLNTVESASK
Sbjct: 185 EEKSHGHRRAASASPDIGSWKIAISGVDFQQCPLNGQTQKLVRKIPSFSGFLNTVESASK 244

Query: 241 FKWPKNGFRKLKVVDRDQETNLVLSQSPQSARGIIVGYARNKSCLDSCDDFYDKQLYGWY 300
           FKWPKNGFRKLKVVDR QETN  L QSPQSARGIIVGY RNKSCLDSCDDFYDKQLYGWY
Sbjct: 245 FKWPKNGFRKLKVVDRHQETNSKL-QSPQSARGIIVGYERNKSCLDSCDDFYDKQLYGWY 304

Query: 301 GSIQRQFQRYIYQMQYSRPVRATLST 327
           GSIQRQFQR IYQMQYSRPV+ TL T
Sbjct: 305 GSIQRQFQRSIYQMQYSRPVQVTLLT 329

[Close]

BLAST of Lsi08G015130 vs. ExPASy TrEMBL
Match: A0A1S3BAL2 (uncharacterized protein LOC103487851 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487851 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 1.3e-122
Identity = 229/266 (86.09%), Postives = 240/266 (90.23%), Query Frame = 0


Query: 61  LEEFERAVKASYVNNTNEDARDRHREFILAIEDQISKTQSSLQEFSQSKGKPPMPWMQLD 120
           LEEFERAV+ASYVNN+N+DARDRHREFILAI DQISKTQ S+QE SQSKGK   PWMQLD
Sbjct: 65  LEEFERAVEASYVNNSNDDARDRHREFILAIGDQISKTQCSVQELSQSKGKSSRPWMQLD 124

Query: 121 EGESDELALFLSGPSAGENKTVVNNVVSDNGNPQGMDEESAPACSINSLQSVEQGSHNDG 180
           EGES+ELA+FLSGPSAGENKT VNNVVS+N  P GMDEESA  CSINS Q VEQGSH+D 
Sbjct: 125 EGESEELAMFLSGPSAGENKTAVNNVVSNNEKPHGMDEESALDCSINSHQPVEQGSHDDR 184

Query: 181 DEKSHGHRRTASASPDIGSWKIAISGVDFPQSPLDGQTQKLVRKIPSFSGFLNTVESASK 240
           +EKSHGHRR ASASPDIGSWKIAISGVDF Q PL+GQTQKLVRKIPSFSGFLNTVESASK
Sbjct: 185 EEKSHGHRRAASASPDIGSWKIAISGVDFQQCPLNGQTQKLVRKIPSFSGFLNTVESASK 244

Query: 241 FKWPKNGFRKLKVVDRDQETNLVLSQSPQSARGIIVGYARNKSCLDSCDDFYDKQLYGWY 300
           FKWPKNGFRKLKVVDR QETN  L QSPQSARGIIVGY RNKSCLDSCDDFYDKQLYGWY
Sbjct: 245 FKWPKNGFRKLKVVDRHQETNSKL-QSPQSARGIIVGYERNKSCLDSCDDFYDKQLYGWY 304

Query: 301 GSIQRQFQRYIYQMQYSRPVRATLST 327
           GSIQRQFQR IYQMQYSRPV+ TL T
Sbjct: 305 GSIQRQFQRSIYQMQYSRPVQVTLLT 329

[Close]

BLAST of Lsi08G015130 vs. ExPASy TrEMBL
Match: A0A6J1BVJ0 (uncharacterized protein LOC111005100 OS=Momordica charantia OX=3673 GN=LOC111005100 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.9e-116
Identity = 215/266 (80.83%), Postives = 235/266 (88.35%), Query Frame = 0


Query: 61  LEEFERAVKASYVNNTNEDARDRHREFILAIEDQISKTQSSLQEFSQSKGKPPMPWMQLD 120
           LEEFERAVK+SY+NNTNEDARDRHREFI+AIEDQ+SKT++SLQE S+SKGK  +PWM+LD
Sbjct: 65  LEEFERAVKSSYINNTNEDARDRHREFIVAIEDQVSKTENSLQEVSESKGKSSLPWMRLD 124

Query: 121 EGESDELALFLSGPSAGENKTVVNNVVSDNGNPQGMDEESAPACSINSLQSVEQGSHNDG 180
           EGES+ELALFLSGPS GE+KTVVNNVVSDNGN Q MDEESAPACS NSLQS ++G +   
Sbjct: 125 EGESNELALFLSGPSTGEDKTVVNNVVSDNGNSQAMDEESAPACSSNSLQSADRGDYR-- 184

Query: 181 DEKSHGHRRTASASPDIGSWKIAISGVDFPQSPLDGQTQKLVRKIPSFSGFLNTVESASK 240
           +EKSHGHRRTASASPDIGSWKIAISGVDF Q  L+GQ+Q  VRKIPSFSG L+TVESA K
Sbjct: 185 EEKSHGHRRTASASPDIGSWKIAISGVDFQQGSLNGQSQP-VRKIPSFSGLLSTVESAPK 244

Query: 241 FKWPKNGFRKLKVVDRDQETNLVLSQSPQSARGIIVGYARNKSCLDSCDDFYDKQLYGWY 300
            KWPKNGFRK KVVDR QETN  L QSPQS RGII GY RNKSCLDSCDDFYDKQLYGWY
Sbjct: 245 LKWPKNGFRKSKVVDRHQETNSTLLQSPQSTRGIIAGYVRNKSCLDSCDDFYDKQLYGWY 304

Query: 301 GSIQRQFQRYIYQMQYSRPVRATLST 327
           GSIQRQFQR +YQMQYSRPV+ T ST
Sbjct: 305 GSIQRQFQRSLYQMQYSRPVQVTFST 327

[Close]

BLAST of Lsi08G015130 vs. NCBI nr
Match: XP_038885100.1 (uncharacterized protein LOC120075617 isoform X2 [Benincasa hispida])

HSP 1 Score: 466.8 bits (1200), Expect = 1.7e-127
Identity = 235/268 (87.69%), Postives = 251/268 (93.66%), Query Frame = 0


Query: 60  LLEEFERAVKASYVNNTNEDARDRHREFILAIEDQISKTQSSLQEFSQSKGKPPMPWMQL 119
           +LEEFERAVKASYVNNT+EDARDRHREFILAIEDQISKTQSSLQEFSQSKGKP MPWM+L
Sbjct: 1   MLEEFERAVKASYVNNTSEDARDRHREFILAIEDQISKTQSSLQEFSQSKGKPSMPWMRL 60

Query: 120 DEGESDELALFLSGPSAGENKTVVNNVVSDNGNPQGMDEESAPACSINSLQSVEQGSHND 179
           DEGES+ELALFLSGPSAG++KTV NNVVSDN NPQGMD++SAPACSINSLQSVEQGSH+D
Sbjct: 61  DEGESNELALFLSGPSAGQDKTVANNVVSDNENPQGMDKQSAPACSINSLQSVEQGSHDD 120

Query: 180 GDEKSH-GHRRTASASPDIGSWKIAISGVDFPQSPLDGQTQKLVRKIPSFSGFLNTVESA 239
            +EKSH GHRRTASASPDIGSWKIAISGVD  Q PL+GQTQK VRKIPSFSGFLNTVESA
Sbjct: 121 REEKSHGGHRRTASASPDIGSWKIAISGVDVQQCPLNGQTQKFVRKIPSFSGFLNTVESA 180

Query: 240 SKFKWPKNGFRKLKVVDRDQETNLVLSQSPQSARGIIVGYARNKSCLDSCDDFYDKQLYG 299
           SKFKWPKNGFRKLK+VDR QETN +L QSPQSARG+IVGY R+KS LDSCDDFYDKQLYG
Sbjct: 181 SKFKWPKNGFRKLKIVDRHQETNPMLLQSPQSARGVIVGYERSKSYLDSCDDFYDKQLYG 240

Query: 300 WYGSIQRQFQRYIYQMQYSRPVRATLST 327
           WYGSIQRQFQR IYQMQYSRPV+  LST
Sbjct: 241 WYGSIQRQFQRSIYQMQYSRPVQVILST 268

[Close]

BLAST of Lsi08G015130 vs. NCBI nr
Match: XP_038885099.1 (uncharacterized protein LOC120075617 isoform X1 [Benincasa hispida])

HSP 1 Score: 466.1 bits (1198), Expect = 2.9e-127
Identity = 235/267 (88.01%), Postives = 250/267 (93.63%), Query Frame = 0


Query: 61  LEEFERAVKASYVNNTNEDARDRHREFILAIEDQISKTQSSLQEFSQSKGKPPMPWMQLD 120
           LEEFERAVKASYVNNT+EDARDRHREFILAIEDQISKTQSSLQEFSQSKGKP MPWM+LD
Sbjct: 65  LEEFERAVKASYVNNTSEDARDRHREFILAIEDQISKTQSSLQEFSQSKGKPSMPWMRLD 124

Query: 121 EGESDELALFLSGPSAGENKTVVNNVVSDNGNPQGMDEESAPACSINSLQSVEQGSHNDG 180
           EGES+ELALFLSGPSAG++KTV NNVVSDN NPQGMD++SAPACSINSLQSVEQGSH+D 
Sbjct: 125 EGESNELALFLSGPSAGQDKTVANNVVSDNENPQGMDKQSAPACSINSLQSVEQGSHDDR 184

Query: 181 DEKSH-GHRRTASASPDIGSWKIAISGVDFPQSPLDGQTQKLVRKIPSFSGFLNTVESAS 240
           +EKSH GHRRTASASPDIGSWKIAISGVD  Q PL+GQTQK VRKIPSFSGFLNTVESAS
Sbjct: 185 EEKSHGGHRRTASASPDIGSWKIAISGVDVQQCPLNGQTQKFVRKIPSFSGFLNTVESAS 244

Query: 241 KFKWPKNGFRKLKVVDRDQETNLVLSQSPQSARGIIVGYARNKSCLDSCDDFYDKQLYGW 300
           KFKWPKNGFRKLK+VDR QETN +L QSPQSARG+IVGY R+KS LDSCDDFYDKQLYGW
Sbjct: 245 KFKWPKNGFRKLKIVDRHQETNPMLLQSPQSARGVIVGYERSKSYLDSCDDFYDKQLYGW 304

Query: 301 YGSIQRQFQRYIYQMQYSRPVRATLST 327
           YGSIQRQFQR IYQMQYSRPV+  LST
Sbjct: 305 YGSIQRQFQRSIYQMQYSRPVQVILST 331

[Close]

BLAST of Lsi08G015130 vs. NCBI nr
Match: XP_011649573.1 (uncharacterized protein LOC101221387 isoform X2 [Cucumis sativus])

HSP 1 Score: 456.4 bits (1173), Expect = 2.3e-124
Identity = 229/267 (85.77%), Postives = 245/267 (91.76%), Query Frame = 0


Query: 60  LLEEFERAVKASYVNNTNEDARDRHREFILAIEDQISKTQSSLQEFSQSKGKPPMPWMQL 119
           +LEEFERAVKASYVNN+N+DARDRHREFILAIEDQISKTQSS+QE SQSKGKP MPWM+L
Sbjct: 1   MLEEFERAVKASYVNNSNDDARDRHREFILAIEDQISKTQSSVQELSQSKGKPSMPWMRL 60

Query: 120 DEGESDELALFLSGPSAGENKTVVNNVVSDNGNPQGMDEESAPACSINSLQSVEQGSHND 179
           DEGES+ELA+FLSGPSA ENKT VNNVVS+N NP G +EESAPACSINS Q VEQGSH D
Sbjct: 61  DEGESEELAMFLSGPSAAENKTAVNNVVSNNENPHGKNEESAPACSINSHQPVEQGSHGD 120

Query: 180 GDEKSHGHRRTASASPDIGSWKIAISGVDFPQSPLDGQTQKLVRKIPSFSGFLNTVESAS 239
            DEKSHGHRRTASASPDIGSWKIAISGVDF Q PL+G+TQKLVRKIPSFSGFLN+VESAS
Sbjct: 121 RDEKSHGHRRTASASPDIGSWKIAISGVDFQQCPLNGETQKLVRKIPSFSGFLNSVESAS 180

Query: 240 KFKWPKNGFRKLKVVDRDQETNLVLSQSPQSARGIIVGYARNKSCLDSCDDFYDKQLYGW 299
            FKWPKNGFRKLKV+DR QETN  L QSPQSARGI VGY RNKSCLDSCDDFYDKQLYGW
Sbjct: 181 NFKWPKNGFRKLKVLDRHQETNSKL-QSPQSARGINVGYERNKSCLDSCDDFYDKQLYGW 240

Query: 300 YGSIQRQFQRYIYQMQYSRPVRATLST 327
           YGSI+RQFQR IYQMQY+RPV+ TLST
Sbjct: 241 YGSIKRQFQRSIYQMQYNRPVQVTLST 266

[Close]

BLAST of Lsi08G015130 vs. NCBI nr
Match: XP_004143024.1 (uncharacterized protein LOC101221387 isoform X1 [Cucumis sativus] >KGN62462.1 hypothetical protein Csa_018681 [Cucumis sativus])

HSP 1 Score: 455.7 bits (1171), Expect = 3.9e-124
Identity = 229/266 (86.09%), Postives = 244/266 (91.73%), Query Frame = 0


Query: 61  LEEFERAVKASYVNNTNEDARDRHREFILAIEDQISKTQSSLQEFSQSKGKPPMPWMQLD 120
           LEEFERAVKASYVNN+N+DARDRHREFILAIEDQISKTQSS+QE SQSKGKP MPWM+LD
Sbjct: 65  LEEFERAVKASYVNNSNDDARDRHREFILAIEDQISKTQSSVQELSQSKGKPSMPWMRLD 124

Query: 121 EGESDELALFLSGPSAGENKTVVNNVVSDNGNPQGMDEESAPACSINSLQSVEQGSHNDG 180
           EGES+ELA+FLSGPSA ENKT VNNVVS+N NP G +EESAPACSINS Q VEQGSH D 
Sbjct: 125 EGESEELAMFLSGPSAAENKTAVNNVVSNNENPHGKNEESAPACSINSHQPVEQGSHGDR 184

Query: 181 DEKSHGHRRTASASPDIGSWKIAISGVDFPQSPLDGQTQKLVRKIPSFSGFLNTVESASK 240
           DEKSHGHRRTASASPDIGSWKIAISGVDF Q PL+G+TQKLVRKIPSFSGFLN+VESAS 
Sbjct: 185 DEKSHGHRRTASASPDIGSWKIAISGVDFQQCPLNGETQKLVRKIPSFSGFLNSVESASN 244

Query: 241 FKWPKNGFRKLKVVDRDQETNLVLSQSPQSARGIIVGYARNKSCLDSCDDFYDKQLYGWY 300
           FKWPKNGFRKLKV+DR QETN  L QSPQSARGI VGY RNKSCLDSCDDFYDKQLYGWY
Sbjct: 245 FKWPKNGFRKLKVLDRHQETNSKL-QSPQSARGINVGYERNKSCLDSCDDFYDKQLYGWY 304

Query: 301 GSIQRQFQRYIYQMQYSRPVRATLST 327
           GSI+RQFQR IYQMQY+RPV+ TLST
Sbjct: 305 GSIKRQFQRSIYQMQYNRPVQVTLST 329

[Close]

BLAST of Lsi08G015130 vs. NCBI nr
Match: XP_008444578.1 (PREDICTED: uncharacterized protein LOC103487851 isoform X3 [Cucumis melo])

HSP 1 Score: 450.3 bits (1157), Expect = 1.6e-122
Identity = 229/267 (85.77%), Postives = 241/267 (90.26%), Query Frame = 0


Query: 60  LLEEFERAVKASYVNNTNEDARDRHREFILAIEDQISKTQSSLQEFSQSKGKPPMPWMQL 119
           +LEEFERAV+ASYVNN+N+DARDRHREFILAI DQISKTQ S+QE SQSKGK   PWMQL
Sbjct: 1   MLEEFERAVEASYVNNSNDDARDRHREFILAIGDQISKTQCSVQELSQSKGKSSRPWMQL 60

Query: 120 DEGESDELALFLSGPSAGENKTVVNNVVSDNGNPQGMDEESAPACSINSLQSVEQGSHND 179
           DEGES+ELA+FLSGPSAGENKT VNNVVS+N  P GMDEESA  CSINS Q VEQGSH+D
Sbjct: 61  DEGESEELAMFLSGPSAGENKTAVNNVVSNNEKPHGMDEESALDCSINSHQPVEQGSHDD 120

Query: 180 GDEKSHGHRRTASASPDIGSWKIAISGVDFPQSPLDGQTQKLVRKIPSFSGFLNTVESAS 239
            +EKSHGHRR ASASPDIGSWKIAISGVDF Q PL+GQTQKLVRKIPSFSGFLNTVESAS
Sbjct: 121 REEKSHGHRRAASASPDIGSWKIAISGVDFQQCPLNGQTQKLVRKIPSFSGFLNTVESAS 180

Query: 240 KFKWPKNGFRKLKVVDRDQETNLVLSQSPQSARGIIVGYARNKSCLDSCDDFYDKQLYGW 299
           KFKWPKNGFRKLKVVDR QETN  L QSPQSARGIIVGY RNKSCLDSCDDFYDKQLYGW
Sbjct: 181 KFKWPKNGFRKLKVVDRHQETNSKL-QSPQSARGIIVGYERNKSCLDSCDDFYDKQLYGW 240

Query: 300 YGSIQRQFQRYIYQMQYSRPVRATLST 327
           YGSIQRQFQR IYQMQYSRPV+ TL T
Sbjct: 241 YGSIQRQFQRSIYQMQYSRPVQVTLLT 266

[Close]

BLAST of Lsi08G015130 vs. TAIR 10
Match: AT1G27700.1 (Syntaxin/t-SNARE family protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.8e-39
Identity = 99/264 (37.50%), Postives = 145/264 (54.92%), Query Frame = 0


Query: 61  LEEFERAVKASYVNNTNEDARDRHREFILAIEDQISKTQSSLQEFSQSKGKPPMPWMQLD 120
           L+EF++AVK+SY N  +++ RDRHREF   +E Q+SK + SL+E +QS GK    W++LD
Sbjct: 65  LDEFQKAVKSSYDNRLSDETRDRHREFTFVMEAQVSKIEKSLKEAAQSDGKGTPRWVRLD 124

Query: 121 EGESDELALFLSGPSAGENKTVVNNVVSDNGNPQGMDEESAPACSINSLQSVEQGSHNDG 180
           E + +ELALFL+GPS                       ESA A                 
Sbjct: 125 EDDRNELALFLTGPS-----------------------ESAKA----------------- 184

Query: 181 DEKSHGHRRTASASPDIGSWKIAISGVDFPQSPLDGQTQKLVRKIPSFSGFLNTVESASK 240
               +GHRRTASA+ +  +W IA+S     +   D    +  RK+PSFSGFLN ++  S 
Sbjct: 185 --NPNGHRRTASAA-EFSAWNIAVSDDGLVKKSCDEPVVRPPRKVPSFSGFLNYMDPVS- 244

Query: 241 FKWPKNGFRKLKVVDRDQETNLVLSQSPQSARGIIVGYARNKSCLDSCDDFYDKQLYGWY 300
               K+  RK K +DR  +++  L     + + +     R KSC++  +D Y+KQL+GWY
Sbjct: 245 ----KHCNRKWKGLDRQGDSDAALLPIQANQQDMNGCSERGKSCMECEEDCYEKQLHGWY 280

Query: 301 GSIQRQFQRYIYQMQYSRPVRATL 325
           G++QRQ QR  Y+M+YS+ V A +
Sbjct: 305 GALQRQLQRSQYRMRYSKSVHAAI 280

[Close]

BLAST of Lsi08G015130 vs. TAIR 10
Match: AT4G30240.1 (Syntaxin/t-SNARE family protein )

HSP 1 Score: 74.3 bits (181), Expect = 2.3e-13
Identity = 63/212 (29.72%), Postives = 101/212 (47.64%), Query Frame = 0


Query: 61  LEEFERAVKASYVNNTNEDARDRHREFILAIEDQISKTQSSLQEFSQSKGKPPMPWMQLD 120
           LEEFERAV  S+ N  ++    RH++F+ AIE+QI + +S+L E     GK P+ W+ L+
Sbjct: 67  LEEFERAVSLSHGNCRDDTTLTRHKQFVTAIENQIYQVESTLLESLSENGKQPLRWVDLN 126

Query: 121 EGESDELALFLSGPSA--------------GENKTVVNNVVSDNGNPQGMDEESAPACSI 180
           + E D+LA+FLSG S                   +V  N    NG  +G     +P C I
Sbjct: 127 KEERDDLAMFLSGSSQTSESLNSDSINLRDSSTSSVAENPRGINGRREGRCYGDSPDCVI 186

Query: 181 NSLQSVEQGSHNDGDEKSHGHRRTASASPDIGSWKIAISGVDFPQSPLDGQTQKLVRKIP 240
           +    ++     +  +K  G RRT S SP++ +  I+   ++ P +  + + +K      
Sbjct: 187 D----IDDIGSPESADKKGGTRRTWS-SPNVPN--ISALRINVPVNAKEEEREK------ 246

Query: 241 SFSGFLNTVESASKFKWPKNGFRKLKVVDRDQ 259
               FL+ +E   K K  K  F   +  D +Q
Sbjct: 247 ----FLSHIEDTPKEKGAKPMFWLQRCRDYNQ 261

[Close]

BLAST of Lsi08G015130 vs. TAIR 10
Match: AT2G18860.1 (Syntaxin/t-SNARE family protein )

HSP 1 Score: 73.6 bits (179), Expect = 3.9e-13
Identity = 59/167 (35.33%), Postives = 87/167 (52.10%), Query Frame = 0


Query: 61  LEEFERAVKASYVN-NTNEDARDRHREFILAIEDQISKTQSSLQEFSQSKGKPPMPWMQL 120
           LEEFE+AV+ S+     N+ +  RH++F+ AIE+QI + ++SLQE     GK P+ W+ L
Sbjct: 59  LEEFEKAVRLSHKRCGDNDSSSTRHKQFVTAIENQIHRVETSLQEAYSENGKKPLRWVDL 118

Query: 121 DEGESDELALFLSGPS------AGE---------NKTVVNNVVSDNGN---PQGMDEESA 180
           +E E D+LA+FLSG S      +GE         N ++V NV+  +      +       
Sbjct: 119 NEEERDDLAMFLSGSSRTSQSFSGESSIKSRESTNSSLVENVMEVSAKVTFKKAKVYGDG 178

Query: 181 PACSINSLQSVEQGSHNDGDEKSHGHRRTASASPDIGSWKIAISGVD 209
             C I+  + V  G      EKS G RR  S SP+  S +I + G D
Sbjct: 179 SECVIDIEERVTPGQ----AEKSVGLRRIWS-SPNFNSLRIIVPGGD 220

[Close]

BLAST of Lsi08G015130 vs. TAIR 10
Match: AT2G18860.2 (Syntaxin/t-SNARE family protein )

HSP 1 Score: 73.6 bits (179), Expect = 3.9e-13
Identity = 59/167 (35.33%), Postives = 87/167 (52.10%), Query Frame = 0


Query: 61  LEEFERAVKASYVN-NTNEDARDRHREFILAIEDQISKTQSSLQEFSQSKGKPPMPWMQL 120
           LEEFE+AV+ S+     N+ +  RH++F+ AIE+QI + ++SLQE     GK P+ W+ L
Sbjct: 40  LEEFEKAVRLSHKRCGDNDSSSTRHKQFVTAIENQIHRVETSLQEAYSENGKKPLRWVDL 99

Query: 121 DEGESDELALFLSGPS------AGE---------NKTVVNNVVSDNGN---PQGMDEESA 180
           +E E D+LA+FLSG S      +GE         N ++V NV+  +      +       
Sbjct: 100 NEEERDDLAMFLSGSSRTSQSFSGESSIKSRESTNSSLVENVMEVSAKVTFKKAKVYGDG 159

Query: 181 PACSINSLQSVEQGSHNDGDEKSHGHRRTASASPDIGSWKIAISGVD 209
             C I+  + V  G      EKS G RR  S SP+  S +I + G D
Sbjct: 160 SECVIDIEERVTPGQ----AEKSVGLRRIWS-SPNFNSLRIIVPGGD 201

The following BLAST results are available for this feature:

BLAST of Lsi08G015130 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi08G015130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNV7	1.9e-124	86.09	Syntaxin-6_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G35488...	[more]
A0A1S3BBD8	7.9e-123	85.77	uncharacterized protein LOC103487851 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7V0T6	1.3e-122	86.09	t-SNARE OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00730 PE=4 S...	[more]
A0A1S3BAL2	1.3e-122	86.09	uncharacterized protein LOC103487851 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1BVJ0	1.9e-116	80.83	uncharacterized protein LOC111005100 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]

BLAST of Lsi08G015130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885100.1	1.7e-127	87.69	uncharacterized protein LOC120075617 isoform X2 [Benincasa hispida]	[more]
XP_038885099.1	2.9e-127	88.01	uncharacterized protein LOC120075617 isoform X1 [Benincasa hispida]	[more]
XP_011649573.1	2.3e-124	85.77	uncharacterized protein LOC101221387 isoform X2 [Cucumis sativus]	[more]
XP_004143024.1	3.9e-124	86.09	uncharacterized protein LOC101221387 isoform X1 [Cucumis sativus] >KGN62462.1 hy...	[more]
XP_008444578.1	1.6e-122	85.77	PREDICTED: uncharacterized protein LOC103487851 isoform X3 [Cucumis melo]	[more]

BLAST of Lsi08G015130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27700.1	1.8e-39	37.50	Syntaxin/t-SNARE family protein	[more]
AT4G30240.1	2.3e-13	29.72	Syntaxin/t-SNARE family protein	[more]
AT2G18860.1	3.9e-13	35.33	Syntaxin/t-SNARE family protein	[more]
AT2G18860.2	3.9e-13	35.33	Syntaxin/t-SNARE family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..195
None	No IPR available	PANTHER	PTHR34949	OS05G0443700 PROTEIN	coord: 61..325
None	No IPR available	PANTHER	PTHR34949:SF6	EXPRESSED PROTEIN	coord: 61..325

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G015130.1	Lsi08G015130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0016021	integral component of membrane