Lsi08G014390 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G014390
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein OSB1, mitochondrial-like
Location	chr08: 22588413 .. 22592665 (-)
RNA-Seq Expression	Lsi08G014390
Synteny	Lsi08G014390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAACAGCAAACGGACACGTCAGAAAAATGCCGCCAAGTACTTCTTCGAAACTGCCGGCAAACTCTACCGAGAAAGTTGGACTGGATTCATCACCGTCGACGGACCTCCGCATCGACGTTCGGTTACTATGAGGGCCGTTCGTCTTCTCTTTTCCCTTAGACGAGTAGCTGCATCGCCTTCGCCACCGGTAGCGTTATTCTCTTCGTCTTCATCATTAATCACTAAAACGACGAACTGTGTCGCCACTGAGGCAAAGAAGGGAGGTTCGGTACACAGAAATCGGCTGAAATTTAAGTGGAACTCGGCTAGTTTCTTTGGTACAGTGGAACAGCCCCTTAGAGTGCATACCAGGAATGGCCGCACAGTCCGTGCCTGGACAATTCTTCGAGCTAAACTCTCCCCAGATTCTAACTGCAGTTTTAGGTAGTTTCTTCCGTACTGTTTCTAATTTTTGGAACCAGTCATCTTATTAAATGCTGTATGAACTTCGCTTTCTTATTTTGTTATTTTACTGTTATTTGTTTGATTCAACTGCTGTTTTTATGTTTGTTGTTTTGTTTGAATAGACATTCAAGCTGAGTTAATATAGCGGGCCTTTCTTTTAGTTGGATGTATTTCAATGATCAAGAACCTATAAGTTTTGAATTCCCTCTATTTATCCCATTGCTGCTGGTTCATGCTGTTACTTGCGATTCCAGTCCCAGTTATATCTTTCTGGCGTTTTGAGATTGGATAACGCTGTAAAAAGTTTCCCCCTTCAGTATGTGCCTAAATTCCCCTGTATTGGTTAATGATTTTGTACATGTATGTGTGTAGGATTGGTCTGAAACTGTGGGAAGATATGGCTGAATCATACATTGAACGTCTTAAACCGAATGACTTCATTTATGTTGCTGGTACTTTAGAGTCTCATAAGAAGGCTGATAAGTGCGGGAAGTCTTCTTTATCTTACGAGGTCAGATGATCTAGTATTCACACGAAGATATTTATATTGTTTATCTTGCATTTCTACTCATCGTGTTGACTTCTTGTCCTTAGTTTAGGAGCTAAATTCCTTTTTGCATCTGGATTAGAACTATTTTTTACCTTTTAATACCTTGGCTAATCTGCAAAGGTCACTGAACAAGCTATTTTTATATGAATCTCGTATTGGCATTTGATCTTTTAAGAATTTTTTATATTCAACATTTTCATATACTCTGGTATGGTGTGATCCTACCCACTTGGGGTTTCTGTTTCCCTTAAAAACTTGTCAGGCTCTTCTGACCATTTAAGTACTTTAAAAAACTGGCAACATTTTAAGTTATTCAGGAAAGTGGCAAGTAGATTTGCAGTACATGAACTTCGATCTGGATACTGAAAGCCGTGTTTGTAATTTAACAGATCAGTTTGGATAGAAGCACTGCATTGTTTTCAATTGAGATAGTGTCCTCCTTCTGTTATTTACTATTAAAATGTGTTATCCATTTCATCCTTCCATTTGGGTCTCCTCTGGCTACAGCAAGCTTCTTAGTACCTTCTGTAAATATGGTCTAACTGCCTCATGGAATAATTGGAAATCCTCACTGTAATTTCTGTTGAGTCAAGGAGTTCCTTCATGTAAAACTCTTAGGTTTGAGAGAATCAGAATACTTTATTCCATTCACTAAAGAAATATATATACAAGCTTACAAAAGTGTCCAAAGAAGAAAAGTGTAGAAAAAGCCATAAAAGGAAAATATAACAAAGATATTTACAATAATAAAATATTCCTAATATTAGAACTATAACACTTCCATTCTCTTTCATAAAATTTTGTTTTCTGCAAAGTCTATTTTTTTTTTTGTCCCAAAAGAATGTAATCTATCAGTTTTCCAACATTTAAGTTTTCCTCGATGTTTCTTTTAACTAGGCATGTACATATTCAACAGGGTCATACCTGAAGATTACTAATTCATCTGTTTTTTATATTTGACTTTTGTACTCATTGTTTTTCCTGCAGTTAACTGTGTCGGAGTTGAATTGCATTGCACAATGTGATCAGGCCTCGAAAAGTCAAAATTCTGTAGACATGCTACACGAAGAAGGTACGTTTTGAATCAATTGTCTTTTCAGTTGATTGAAACTTCAGTTATGCATATAAATAAATAAGATATATTGTTTAACTGTTGAAAAGTTCATTTATGTCTGCTGTAAATTATTCAGTTCTGATGATTGAATGAAATTCAGTTTGTTGCGTGAACTGGTATTGTGAATTTAACTGACGTATGCTGAGAGGGCATTCCTCCCGTGGCATCTGAAAAATAAACGAGGAAGAGTTTTCTTGCTTGCCTATTCAAGTATTCGTGCAATTATGAAACATCCCAAAATCATATTTAGTTCGATGGCAATCCCCTGTGTGTTTATTCCGCAAGTATTTATGCGATCTCTAACATTAAAGGAGGAGCTCTTATCAAGGAGGTGTGGGAGGTGGAGTTTCAATGGTGGGTTACAGGTTTGGGAAAAAGGCTCTTTGAAAAAAAACCTGAGAAGAAAAGTGGAAGGTTCTTTCAATTGTTATCCTACGAGGTTAGGCTTTAGAAGAAGAAAAGTGGGGGTTTATCTTTTTGCCGCTTTTTCTTTCTTGTACGCCTTACACTTTCAAGCGCAATTCCAACTATACCAAGCTGTGTTCCGCCATTAACTAAACTCATTTTGTGGGGACAAGTTTAGGAAAAAGAGTGTTCAATATATATTTGGTCCATAGTAGATAGAGTGTGGAGAAAAAATCCCTTCTTATTTCTCCTTGGATCTTCCATGTTTGCAAGACTATGCAGAAACGATGGCGCATTGTTTCATTCCATATGATCTTTCTGCCAAAGGTTGGAACAGTTGAAATCTTTAGTTTATTCTTTAAATAGATTCATTTTGTCCAATTTATCTTCCTAGCGTATTTCCCTTCCACTATCTGTTCTGAAAGGCGCATCTAGGCTCTCCAATCACACTCAGGCGAGAGCCTAGGCTCCAAGCGCACTTAGGCACACTTGGGCTCACCTGCTCTTCTAGCACTTAAAATCTTAAACACACTCAGACTCATTTGTCATTATTATTAATTATTATTTAGTACCCTTTCTCTCTACTTTCACTCACAAATCTACCTTTCTTTAATTTTCCTTCCATCGTTATCTTGTTTTTCACCTTATACTTCGTCAATATTGGAAACTTTTGGTTGGTCTCCGACTTGTCCTCATACCATTTATGATGTTATGTCATCTTTTTTGGTGGGTCATCCTTTTGGTGGTACTAAAAAGATGGTTTGGTTGGTTCTCATGCATGCTCTCCTTTGGACCATTTGGTGTGAACGTAATGGTCGTCTTTTTCAAGACTCTTTTTCCTCCCTCAACAAGTTGGGTAAATCAACTATTGTTCGTTTTTTTTCTTTCTTTTTTCGGTACTGCAGGATATGCTCATAGGGGTAATTACAGGGAACACCTGCATCTGTGGCAAGTGTTTTTCAGTAGTCCACATGAATGGTGGGATAACAGGAACCGAAAGTCAAATCCAAAACATCCGGACTTTAGACACAAGAGTACTGGTGAGGCCCTGTGGCTTCGGGAAACAGATCCTCCATGGATCAGAAAACAGCTTGAATTGCTTGACACCAAAATGGAAGAAAAAGATCAAGATGATCACTTTGGCTCTGATTCCAGTATGTCGAAGTGGTTAAATGGCTGAAGAAGTCTGCTTGCAGCTGCTGTATCTTGTGCTCTCTACATTGGTTCTTCTGCTTGAACAATATATTTAATCCAAGTACAAAATCTGTTTCCAGATTCCTCTGTGACAGTTGACTGGGGAACGTTGGAGCAAATCGAAACAGAGTAGCTTCGTTGGCAGAGATTTAGCTTGTATATATGTATAATGTTCATAGAGAAGCCAACCTATGAAGCAAATGGAATGGTAGATTGAAGGTACATGTAAGAGAGTATTTGTTGGCCTTTTCTCTCTTTACTTTCAGTTACTTCACAACAAAACCATGTGTGCCATAATAGTCCATATTAGATATTGGAATGAGCTTAATTTCTTTATCTGAATTATGTGTGAAATGAAATCACAGGAGGAAAAAGAAGAGGCAGATAGAAATACAACATAAAGCAAAGAGGCTCTCTCCTCCATTAATAACAGCTCATCTTTATATTTATAACAGCTGTTTGGCTCTTTGGCCTATGCTTCATTCACCTTCTCCCAGATGATTAGAATTACATCGATATCTATAGTATTTTGGGGTTTCTCCGCT

mRNA sequence

GGAACAGCAAACGGACACGTCAGAAAAATGCCGCCAAGTACTTCTTCGAAACTGCCGGCAAACTCTACCGAGAAAGTTGGACTGGATTCATCACCGTCGACGGACCTCCGCATCGACGTTCGGTTACTATGAGGGCCGTTCGTCTTCTCTTTTCCCTTAGACGAGTAGCTGCATCGCCTTCGCCACCGGTAGCGTTATTCTCTTCGTCTTCATCATTAATCACTAAAACGACGAACTGTGTCGCCACTGAGGCAAAGAAGGGAGGTTCGGTACACAGAAATCGGCTGAAATTTAAGTGGAACTCGGCTAGTTTCTTTGGTACAGTGGAACAGCCCCTTAGAGTGCATACCAGGAATGGCCGCACAGTCCGTGCCTGGACAATTCTTCGAGCTAAACTCTCCCCAGATTCTAACTGCAGTTTTAGGATTGGTCTGAAACTGTGGGAAGATATGGCTGAATCATACATTGAACGTCTTAAACCGAATGACTTCATTTATGTTGCTGGTACTTTAGAGTCTCATAAGAAGGCTGATAAGTGCGGGAAGTCTTCTTTATCTTACGAGTTAACTGTGTCGGAGTTGAATTGCATTGCACAATGTGATCAGGCCTCGAAAAGTCAAAATTCTGTAGACATGCTACACGAAGAAGGATATGCTCATAGGGGTAATTACAGGGAACACCTGCATCTGTGGCAAGTGTTTTTCAGTAGTCCACATGAATGGTGGGATAACAGGAACCGAAAGTCAAATCCAAAACATCCGGACTTTAGACACAAGAGTACTGGTGAGGCCCTGTGGCTTCGGGAAACAGATCCTCCATGGATCAGAAAACAGCTTGAATTGCTTGACACCAAAATGGAAGAAAAAGATCAAGATGATCACTTTGGCTCTGATTCCAGTATGTCGAAGTGGTTAAATGGCTGAAGAAGTCTGCTTGCAGCTGCTGTATCTTGTGCTCTCTACATTGGTTCTTCTGCTTGAACAATATATTTAATCCAAGTACAAAATCTGTTTCCAGATTCCTCTGTGACAGTTGACTGGGGAACGTTGGAGCAAATCGAAACAGAGTAGCTTCGTTGGCAGAGATTTAGCTTGTATATATGTATAATGTTCATAGAGAAGCCAACCTATGAAGCAAATGGAATGGTAGATTGAAGGTACATGTAAGAGAGTATTTGTTGGCCTTTTCTCTCTTTACTTTCAGTTACTTCACAACAAAACCATGTGTGCCATAATAGTCCATATTAGATATTGGAATGAGCTTAATTTCTTTATCTGAATTATGTGTGAAATGAAATCACAGGAGGAAAAAGAAGAGGCAGATAGAAATACAACATAAAGCAAAGAGGCTCTCTCCTCCATTAATAACAGCTCATCTTTATATTTATAACAGCTGTTTGGCTCTTTGGCCTATGCTTCATTCACCTTCTCCCAGATGATTAGAATTACATCGATATCTATAGTATTTTGGGGTTTCTCCGCT

Coding sequence (CDS)

ATGAGGGCCGTTCGTCTTCTCTTTTCCCTTAGACGAGTAGCTGCATCGCCTTCGCCACCGGTAGCGTTATTCTCTTCGTCTTCATCATTAATCACTAAAACGACGAACTGTGTCGCCACTGAGGCAAAGAAGGGAGGTTCGGTACACAGAAATCGGCTGAAATTTAAGTGGAACTCGGCTAGTTTCTTTGGTACAGTGGAACAGCCCCTTAGAGTGCATACCAGGAATGGCCGCACAGTCCGTGCCTGGACAATTCTTCGAGCTAAACTCTCCCCAGATTCTAACTGCAGTTTTAGGATTGGTCTGAAACTGTGGGAAGATATGGCTGAATCATACATTGAACGTCTTAAACCGAATGACTTCATTTATGTTGCTGGTACTTTAGAGTCTCATAAGAAGGCTGATAAGTGCGGGAAGTCTTCTTTATCTTACGAGTTAACTGTGTCGGAGTTGAATTGCATTGCACAATGTGATCAGGCCTCGAAAAGTCAAAATTCTGTAGACATGCTACACGAAGAAGGATATGCTCATAGGGGTAATTACAGGGAACACCTGCATCTGTGGCAAGTGTTTTTCAGTAGTCCACATGAATGGTGGGATAACAGGAACCGAAAGTCAAATCCAAAACATCCGGACTTTAGACACAAGAGTACTGGTGAGGCCCTGTGGCTTCGGGAAACAGATCCTCCATGGATCAGAAAACAGCTTGAATTGCTTGACACCAAAATGGAAGAAAAAGATCAAGATGATCACTTTGGCTCTGATTCCAGTATGTCGAAGTGGTTAAATGGCTGA

Protein sequence

MRAVRLLFSLRRVAASPSPPVALFSSSSSLITKTTNCVATEAKKGGSVHRNRLKFKWNSASFFGTVEQPLRVHTRNGRTVRAWTILRAKLSPDSNCSFRIGLKLWEDMAESYIERLKPNDFIYVAGTLESHKKADKCGKSSLSYELTVSELNCIAQCDQASKSQNSVDMLHEEGYAHRGNYREHLHLWQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTGEALWLRETDPPWIRKQLELLDTKMEEKDQDDHFGSDSSMSKWLNG

Homology

[Close]

BLAST of Lsi08G014390 vs. ExPASy Swiss-Prot
Match: Q9SX99 (Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.7e-34
Identity = 85/210 (40.48%), Postives = 122/210 (58.10%), Query Frame = 0


Query: 52  RLKFKW-NSASFFGTVEQPLRVHTRNGRTVRAWTILRAKLSPDSNCSFRIGLKLWEDMAE 111
           +LKF   NS S  G V++ ++V          +TILR K   + N SFRI L++W+ MA 
Sbjct: 49  KLKFNLVNSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISLRMWDAMAR 108

Query: 112 SYIERLKPNDFIYVAGTLESHKK--ADKCGKSSLSYELTVSELNCIA---------QCDQ 171
           + I  LK ND I V+G LES+ K  +D     +L Y++ V+E+N +A         Q  +
Sbjct: 109 TCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYVAAPPSHVLDSQISK 168

Query: 172 ASKSQNSVDMLHEEGYAHRGNYREHLHLWQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTG 231
             K++   D+  EE      + ++ ++LWQVFFS+P++WWDNR  K NPK PDF+HK TG
Sbjct: 169 NPKTKTEDDI--EE------SKKDEIYLWQVFFSNPYDWWDNRRNKKNPKQPDFKHKDTG 228

Query: 232 EALWLRETDPPWIRKQLELLDTKMEEKDQD 250
           EALWL    P WI ++LEL D K    D++
Sbjct: 229 EALWLCSDLPDWITRRLELFDQKNRFYDEE 250

[Close]

BLAST of Lsi08G014390 vs. ExPASy Swiss-Prot
Match: Q8GWJ4 (Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB3 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.3e-09
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 165 NSVDMLHEEGYAHRGNYRE--HLHLWQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTGEAL 224
           N V  L  +    +GN ++     +W+    +P +WWDNR  K NPK PDF+HK TGEAL
Sbjct: 355 NKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEAL 414

Query: 225 WLRETDPPWIRKQLELLDTKME 245
           W+ ++ P W   +L  L    E
Sbjct: 415 WIGDS-PTWALSKLPPLKKNQE 435

[Close]

BLAST of Lsi08G014390 vs. ExPASy Swiss-Prot
Match: Q8GXH3 (Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 4.0e-09
Identity = 28/57 (49.12%), Postives = 36/57 (63.16%), Query Frame = 0


Query: 188 WQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTGEALWLRETDPPWIRKQLELLDTKME 245
           W+    +P +WWDNR  K N K PDF+HK TGEALWL E+ P W+  +L  +  K E
Sbjct: 312 WKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNES-PTWVLPKLPPVKKKQE 367

[Close]

BLAST of Lsi08G014390 vs. ExPASy Swiss-Prot
Match: Q9FYJ2 (Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-06
Identity = 22/49 (44.90%), Postives = 32/49 (65.31%), Query Frame = 0


Query: 188 WQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTGEALWLRETDPPWIRKQL 237
           W+    + ++WWDNR  K  PK PDF+HK TG  LWL ++ P W+ ++L
Sbjct: 296 WKDLVDNMNKWWDNRVDKRTPKSPDFKHKETGVGLWLSDS-PSWVLEKL 343

[Close]

BLAST of Lsi08G014390 vs. ExPASy TrEMBL
Match: A0A6J1GJW3 (protein OSB1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111454556 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 2.0e-112
Identity = 207/265 (78.11%), Postives = 225/265 (84.91%), Query Frame = 0


Query: 1   MRAVRLLFSLRRVAASPSPPVALFSSSSSLITKTTNCVATEAKKGGSVHRNRLKFKWNSA 60
           MRA R L +LR+V  SP PPVA FSS SS+ TK+TNCVAT+A  GGSVHRNRLKFKWNSA
Sbjct: 3   MRAFRHLLALRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASDGGSVHRNRLKFKWNSA 62

Query: 61  SFFGTVEQPLRVHTRNGRTVRAWTILRAKLSPDSNCSFRIGLKLWEDMAESYIERLKPND 120
            F GTVEQPL+VHTRNG TV AWT LRAK+SPDSN S RI LKLWE+MAESYIERLKPND
Sbjct: 63  KFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKPND 122

Query: 121 FIYVAGTLESHKKADKCGKSSLSYELTVSELNCIAQCDQASKSQNSVDMLHEE---GYAH 180
           FIYVAGTLES+KKADKCGKS LSYELTVSELN I Q  + SKSQ+S+ M+HEE   GYA 
Sbjct: 123 FIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGYAC 182

Query: 181 RGNYREHLHLWQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTGEALWLRETDPPWIRKQLE 240
           +   RE LHLWQVFFSSPHEWWDNRN+K NP HPDF+HKSTGE LWLR TDPPWI KQLE
Sbjct: 183 KDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQLE 242

Query: 241 LLDTKMEEKDQDDHFGSDSSMSKWL 263
           LLDTKM +KD+DDHFGSDSSMSKWL
Sbjct: 243 LLDTKMVKKDEDDHFGSDSSMSKWL 267

[Close]

BLAST of Lsi08G014390 vs. ExPASy TrEMBL
Match: A0A6J1KK72 (protein OSB1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111496022 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 7.1e-110
Identity = 204/265 (76.98%), Postives = 224/265 (84.53%), Query Frame = 0


Query: 1   MRAVRLLFSLRRVAASPSPPVALFSSSSSLITKTTNCVATEAKKGGSVHRNRLKFKWNSA 60
           MRAVRLL  LR+V  SP P VA FSS SS+ TK+TNCVAT+A  GG VHRN LKFKWN+A
Sbjct: 3   MRAVRLLLPLRQVTVSPLPLVAFFSSFSSVSTKSTNCVATDASDGGLVHRNCLKFKWNAA 62

Query: 61  SFFGTVEQPLRVHTRNGRTVRAWTILRAKLSPDSNCSFRIGLKLWEDMAESYIERLKPND 120
            F GTVEQPL+VHTRNG TV AWT LRAK+S DS+ SFRI LKLWE+MAESYIERLKPND
Sbjct: 63  KFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSRDSSSSFRILLKLWEEMAESYIERLKPND 122

Query: 121 FIYVAGTLESHKKADKCGKSSLSYELTVSELNCIAQCDQASKSQNSVDMLHEE---GYAH 180
           FIYVAGTLES+KKADKCGKS LSYELTVSELN I Q  + SKSQ+SV M+HEE   GYA 
Sbjct: 123 FIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSVGMIHEEGTTGYAC 182

Query: 181 RGNYREHLHLWQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTGEALWLRETDPPWIRKQLE 240
           +   RE LHLWQVFFSSPHEWWDNRN+K NPKHPDF+HKSTGE LWLR TDPPWI KQLE
Sbjct: 183 KDKCRERLHLWQVFFSSPHEWWDNRNQKPNPKHPDFKHKSTGEVLWLRATDPPWIGKQLE 242

Query: 241 LLDTKMEEKDQDDHFGSDSSMSKWL 263
           LLDTKM +KD+DDHFGSDSS++KWL
Sbjct: 243 LLDTKMGKKDEDDHFGSDSSIAKWL 267

[Close]

BLAST of Lsi08G014390 vs. ExPASy TrEMBL
Match: A0A6J1CSS2 (protein OSB1, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111013985 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 4.0e-105
Identity = 198/262 (75.57%), Postives = 216/262 (82.44%), Query Frame = 0


Query: 1   MRAVRLLFSLRRVAASPSPPVALFSSSSSLITKTTNCVATEAKKGGSVHRNRLKFKWNSA 60
           MRAVRLL+ LR+VAASP PPVA F S + + TK+TNC AT+A     V RNR KFKWNSA
Sbjct: 1   MRAVRLLYPLRQVAASPLPPVAFF-SGAVIDTKSTNCAATDANTESPVRRNRPKFKWNSA 60

Query: 61  SFFGTVEQPLRVHTRNGRTVRAWTILRAKLSPDSNCSFRIGLKLWEDMAESYIERLKPND 120
           SF GTVEQPLRV+TRNG+T+ AWT LRAK+SPDSN SFR+ LKLWE+MAES +ERLKPND
Sbjct: 61  SFVGTVEQPLRVNTRNGKTLSAWTFLRAKVSPDSNSSFRVFLKLWEEMAESNLERLKPND 120

Query: 121 FIYVAGTLESHKKADKCGKSSLSYELTVSELNCIAQCDQASKSQNSVDMLHEEGYAHRGN 180
           FIYVAGTLES+KK +KCGKS L YELTVSELN I Q DQ SKSQN   + HEEG   R  
Sbjct: 121 FIYVAGTLESYKKDNKCGKSYLCYELTVSELNYIKQYDQGSKSQNDEGVRHEEG-DPRKK 180

Query: 181 YREHLHLWQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTGEALWLRETDPPWIRKQLELLD 240
           YRE LHLWQVFF SP+EWWDNRN KSN KHPDFRHKSTGEALWL+ TDPPWIRKQLE LD
Sbjct: 181 YRERLHLWQVFFGSPYEWWDNRNHKSNSKHPDFRHKSTGEALWLQATDPPWIRKQLEFLD 240

Query: 241 TKMEEKDQDDHFGSDSSMSKWL 263
            KMEEKDQ  HFGSDSSMSKWL
Sbjct: 241 GKMEEKDQHCHFGSDSSMSKWL 260

[Close]

BLAST of Lsi08G014390 vs. ExPASy TrEMBL
Match: A0A0A0LNI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360660 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 6.9e-105
Identity = 198/261 (75.86%), Postives = 221/261 (84.67%), Query Frame = 0


Query: 1   MRAVRLLFSLRRVAASPSPPVALFSSSSSLITKTTNCVATEAKKGGSVHRNRLKFKWNSA 60
           M+AVRLLFSLR V   PSP VALFSSSSSLITK+ N VATEAKK GSV+ ++ KFKW SA
Sbjct: 1   MKAVRLLFSLRPVTTLPSPSVALFSSSSSLITKSMNSVATEAKKQGSVYEHQPKFKWKSA 60

Query: 61  SFFGTVEQPLRVHTRNGRTVRAWTILRAKLSPDSNCSFRIGLKLWEDMAESYIERLKPND 120
           +FFGTVE+PL+V TRN RTVRAWTILRAK SPDS+ SFRI LKL ++MAES+IERLKPND
Sbjct: 61  NFFGTVERPLKVTTRNCRTVRAWTILRAKASPDSSSSFRIFLKLEKEMAESWIERLKPND 120

Query: 121 FIYVAGTLESHKKADKCGKSSLSYELTVSELNCIAQCDQASKSQNSVDMLHEEGYAHRGN 180
           ++ VAG LES+KK  K GKS LSY+LTVSELNCIA  DQ SKSQNSV MLHEEG+  R +
Sbjct: 121 YVNVAGPLESYKKVGKSGKSYLSYQLTVSELNCIAHNDQGSKSQNSVGMLHEEGHDCRSS 180

Query: 181 YREHLHLWQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTGEALWLRETDPPWIRKQLELLD 240
           YRE L+LWQVFFSSPHEWWDNRN+KSNP  PDF HKSTGEALWLR TDPPWIRKQLELLD
Sbjct: 181 YRERLYLWQVFFSSPHEWWDNRNKKSNPNGPDFSHKSTGEALWLRSTDPPWIRKQLELLD 240

Query: 241 TKMEEKDQDDHFGSDSSMSKW 262
           T+M++KD D H  SDSSMS W
Sbjct: 241 TQMKKKDGDGHLVSDSSMSNW 261

[Close]

BLAST of Lsi08G014390 vs. ExPASy TrEMBL
Match: A0A5A7VHQ1 (Protein OSB1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006260 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.4e-102
Identity = 194/262 (74.05%), Postives = 218/262 (83.21%), Query Frame = 0


Query: 1   MRAVRLLFSLRRVAASPSPPVALFSSSSSLITKTTNCVATEAKKGGSVHRNRLKFKWNSA 60
           M+AVRLLFSLR V  SPSP VALFSSSSSL TK+ N VATEAKK GSV++N+ KF W SA
Sbjct: 1   MKAVRLLFSLRPVTTSPSPSVALFSSSSSLTTKSMNSVATEAKKQGSVYKNQPKFTWKSA 60

Query: 61  SFFGTVEQPLRVHTRNGRTVRAWTILRAKLSPDSNCSFRIGLKLWEDMAESYIERLKPND 120
           +F+GTVE+PL+V T N RTV AWTILRAK+SPDSN SFRI L+L ++MAES+IERLKPND
Sbjct: 61  NFYGTVERPLKVITWNCRTVMAWTILRAKVSPDSNSSFRIFLRLQKEMAESWIERLKPND 120

Query: 121 FIYVAGTLESHKKADKCGKSSLSYELTVSELNCIAQCDQASKSQNSVDMLHEEGYAHRGN 180
           +IYVAGTLES+K A K G SSLSY LTVSELNCI + DQ SKSQNSV MLHEEG   R +
Sbjct: 121 YIYVAGTLESYKNAAKSGTSSLSYRLTVSELNCITRNDQGSKSQNSVGMLHEEGRDCRSS 180

Query: 181 YREHLHLWQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTGEALWLRETDPPWIRKQLELLD 240
           Y E L+LWQVFFSSPHEWWDNRN+KSNP  PDF HKST EALWLR TDPPWI+KQL+LLD
Sbjct: 181 YVERLYLWQVFFSSPHEWWDNRNKKSNPNGPDFTHKSTNEALWLRPTDPPWIKKQLKLLD 240

Query: 241 TKMEEKDQDDHFGSDSSMSKWL 263
           TKM +KD D H  SDSSMS W+
Sbjct: 241 TKMRKKDHDGHLVSDSSMSSWI 262

[Close]

BLAST of Lsi08G014390 vs. NCBI nr
Match: XP_038886148.1 (protein OSB1, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 460.7 bits (1184), Expect = 8.6e-126
Identity = 227/262 (86.64%), Postives = 240/262 (91.60%), Query Frame = 0


Query: 1   MRAVRLLFSLRRVAASPSPPVALFSSSSSLITKTTNCVATEAKKGGSVHRNRLKFKWNSA 60
           MRAVRLLF +RRVAASPSPPVALFSSSS LITK+TNCVATEAKKGGSVHR + KFKWNSA
Sbjct: 1   MRAVRLLFPIRRVAASPSPPVALFSSSSQLITKSTNCVATEAKKGGSVHRKQPKFKWNSA 60

Query: 61  SFFGTVEQPLRVHTRNGRTVRAWTILRAKLSPDSNCSFRIGLKLWEDMAESYIERLKPND 120
           +FFGTVE+PLRV TRNGRTV A TILRAK+SPDSNCSFRI LKLWE+MAES IERLKPND
Sbjct: 61  NFFGTVEEPLRVVTRNGRTVIARTILRAKVSPDSNCSFRILLKLWEEMAESCIERLKPND 120

Query: 121 FIYVAGTLESHKKADKCGKSSLSYELTVSELNCIAQCDQASKSQNSVDMLHEEGYAHRGN 180
           F+YVAGTLES+KK ++CGKS LSYELTVSELNCIAQ DQ SKSQNSV MLHEEGYA R N
Sbjct: 121 FVYVAGTLESYKKTNQCGKSYLSYELTVSELNCIAQNDQGSKSQNSVGMLHEEGYARRCN 180

Query: 181 YREHLHLWQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTGEALWLRETDPPWIRKQLELLD 240
           YRE LHLWQVFFSSPHEWWDNRN+KSNPKHPDF+HKSTGE LWL  TDPPWIRKQLELLD
Sbjct: 181 YRERLHLWQVFFSSPHEWWDNRNQKSNPKHPDFKHKSTGEVLWLEATDPPWIRKQLELLD 240

Query: 241 TKMEEKDQDDHFGSDSSMSKWL 263
           TKMEE DQD HFGSDSSMSKWL
Sbjct: 241 TKMEENDQDGHFGSDSSMSKWL 262

[Close]

BLAST of Lsi08G014390 vs. NCBI nr
Match: XP_022951824.1 (protein OSB1, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 415.2 bits (1066), Expect = 4.1e-112
Identity = 207/265 (78.11%), Postives = 225/265 (84.91%), Query Frame = 0


Query: 1   MRAVRLLFSLRRVAASPSPPVALFSSSSSLITKTTNCVATEAKKGGSVHRNRLKFKWNSA 60
           MRA R L +LR+V  SP PPVA FSS SS+ TK+TNCVAT+A  GGSVHRNRLKFKWNSA
Sbjct: 3   MRAFRHLLALRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASDGGSVHRNRLKFKWNSA 62

Query: 61  SFFGTVEQPLRVHTRNGRTVRAWTILRAKLSPDSNCSFRIGLKLWEDMAESYIERLKPND 120
            F GTVEQPL+VHTRNG TV AWT LRAK+SPDSN S RI LKLWE+MAESYIERLKPND
Sbjct: 63  KFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKPND 122

Query: 121 FIYVAGTLESHKKADKCGKSSLSYELTVSELNCIAQCDQASKSQNSVDMLHEE---GYAH 180
           FIYVAGTLES+KKADKCGKS LSYELTVSELN I Q  + SKSQ+S+ M+HEE   GYA 
Sbjct: 123 FIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGYAC 182

Query: 181 RGNYREHLHLWQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTGEALWLRETDPPWIRKQLE 240
           +   RE LHLWQVFFSSPHEWWDNRN+K NP HPDF+HKSTGE LWLR TDPPWI KQLE
Sbjct: 183 KDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQLE 242

Query: 241 LLDTKMEEKDQDDHFGSDSSMSKWL 263
           LLDTKM +KD+DDHFGSDSSMSKWL
Sbjct: 243 LLDTKMVKKDEDDHFGSDSSMSKWL 267

[Close]

BLAST of Lsi08G014390 vs. NCBI nr
Match: KAG7020550.1 (Protein OSB1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 411.8 bits (1057), Expect = 4.6e-111
Identity = 206/265 (77.74%), Postives = 223/265 (84.15%), Query Frame = 0


Query: 1   MRAVRLLFSLRRVAASPSPPVALFSSSSSLITKTTNCVATEAKKGGSVHRNRLKFKWNSA 60
           MRA R L  LR+V  SP PPVA FSS SS+ TK+TNCVAT+A  GG VHRNRLKFKWNSA
Sbjct: 3   MRAFRHLLPLRQVTVSPLPPVAFFSSFSSVSTKSTNCVATDASGGGLVHRNRLKFKWNSA 62

Query: 61  SFFGTVEQPLRVHTRNGRTVRAWTILRAKLSPDSNCSFRIGLKLWEDMAESYIERLKPND 120
            F GTVEQPL+VHTRNG TV AWT LRAK+SPDSN S RI LKLWE+MAESYIERLKPND
Sbjct: 63  KFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNSSSRILLKLWEEMAESYIERLKPND 122

Query: 121 FIYVAGTLESHKKADKCGKSSLSYELTVSELNCIAQCDQASKSQNSVDMLHEE---GYAH 180
           FIYVAGTLES+KKADKCGKS LSYELTVSELN I Q  + SKSQ+S+ M+HEE   GYA 
Sbjct: 123 FIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSLGMIHEEGTTGYAC 182

Query: 181 RGNYREHLHLWQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTGEALWLRETDPPWIRKQLE 240
           +   RE LHLWQVFFSSPHEWWDNRN+K NP HPDF+HKSTGE LWLR TDPPWI KQLE
Sbjct: 183 KDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQLE 242

Query: 241 LLDTKMEEKDQDDHFGSDSSMSKWL 263
           LLDTKM +KD+DDHFGSDSSMSKWL
Sbjct: 243 LLDTKMVKKDEDDHFGSDSSMSKWL 267

[Close]

BLAST of Lsi08G014390 vs. NCBI nr
Match: XP_023002011.1 (protein OSB1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 406.8 bits (1044), Expect = 1.5e-109
Identity = 204/265 (76.98%), Postives = 224/265 (84.53%), Query Frame = 0


Query: 1   MRAVRLLFSLRRVAASPSPPVALFSSSSSLITKTTNCVATEAKKGGSVHRNRLKFKWNSA 60
           MRAVRLL  LR+V  SP P VA FSS SS+ TK+TNCVAT+A  GG VHRN LKFKWN+A
Sbjct: 3   MRAVRLLLPLRQVTVSPLPLVAFFSSFSSVSTKSTNCVATDASDGGLVHRNCLKFKWNAA 62

Query: 61  SFFGTVEQPLRVHTRNGRTVRAWTILRAKLSPDSNCSFRIGLKLWEDMAESYIERLKPND 120
            F GTVEQPL+VHTRNG TV AWT LRAK+S DS+ SFRI LKLWE+MAESYIERLKPND
Sbjct: 63  KFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSRDSSSSFRILLKLWEEMAESYIERLKPND 122

Query: 121 FIYVAGTLESHKKADKCGKSSLSYELTVSELNCIAQCDQASKSQNSVDMLHEE---GYAH 180
           FIYVAGTLES+KKADKCGKS LSYELTVSELN I Q  + SKSQ+SV M+HEE   GYA 
Sbjct: 123 FIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSVGMIHEEGTTGYAC 182

Query: 181 RGNYREHLHLWQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTGEALWLRETDPPWIRKQLE 240
           +   RE LHLWQVFFSSPHEWWDNRN+K NPKHPDF+HKSTGE LWLR TDPPWI KQLE
Sbjct: 183 KDKCRERLHLWQVFFSSPHEWWDNRNQKPNPKHPDFKHKSTGEVLWLRATDPPWIGKQLE 242

Query: 241 LLDTKMEEKDQDDHFGSDSSMSKWL 263
           LLDTKM +KD+DDHFGSDSS++KWL
Sbjct: 243 LLDTKMGKKDEDDHFGSDSSIAKWL 267

[Close]

BLAST of Lsi08G014390 vs. NCBI nr
Match: XP_023536822.1 (protein OSB1, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 405.6 bits (1041), Expect = 3.3e-109
Identity = 205/265 (77.36%), Postives = 221/265 (83.40%), Query Frame = 0


Query: 1   MRAVRLLFSLRRVAASPSPPVALFSSSSSLITKTTNCVATEAKKGGSVHRNRLKFKWNSA 60
           MRA RLL   R+V  SP P VA FSS SS+ TK+TNCVAT+A  GG V RNRLKFKWNSA
Sbjct: 3   MRAFRLLLPHRQVTVSPLPLVAFFSSFSSVSTKSTNCVATDASDGGLVRRNRLKFKWNSA 62

Query: 61  SFFGTVEQPLRVHTRNGRTVRAWTILRAKLSPDSNCSFRIGLKLWEDMAESYIERLKPND 120
            F GTVEQPL+VHTRNG TV AWT LRAK+SPDSN S RI LKLWE+MAESYIERLKPND
Sbjct: 63  KFVGTVEQPLKVHTRNGDTVYAWTFLRAKVSPDSNRSSRILLKLWEEMAESYIERLKPND 122

Query: 121 FIYVAGTLESHKKADKCGKSSLSYELTVSELNCIAQCDQASKSQNSVDMLHEE---GYAH 180
           FIYVAGTLES+KKADKCGKS LSYELTVSELN I Q  + SKSQ+SV M+HEE   GYA 
Sbjct: 123 FIYVAGTLESYKKADKCGKSFLSYELTVSELNHIRQNARGSKSQDSVGMIHEEGTTGYAC 182

Query: 181 RGNYREHLHLWQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTGEALWLRETDPPWIRKQLE 240
           +   RE LHLWQVFFSSPHEWWDNRN+K NP HPDF+HKSTGE LWLR TDPPWI KQLE
Sbjct: 183 KDKCRERLHLWQVFFSSPHEWWDNRNQKPNPNHPDFKHKSTGEVLWLRATDPPWIGKQLE 242

Query: 241 LLDTKMEEKDQDDHFGSDSSMSKWL 263
           LLDTKM +KD+DDHFGSDSSMSKWL
Sbjct: 243 LLDTKMVKKDEDDHFGSDSSMSKWL 267

[Close]

BLAST of Lsi08G014390 vs. TAIR 10
Match: AT1G47720.1 (Primosome PriB/single-strand DNA-binding )

HSP 1 Score: 146.4 bits (368), Expect = 3.3e-35
Identity = 85/210 (40.48%), Postives = 122/210 (58.10%), Query Frame = 0


Query: 52  RLKFKW-NSASFFGTVEQPLRVHTRNGRTVRAWTILRAKLSPDSNCSFRIGLKLWEDMAE 111
           +LKF   NS S  G V++ ++V          +TILR K   + N SFRI L++W+ MA 
Sbjct: 49  KLKFNLVNSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISLRMWDAMAR 108

Query: 112 SYIERLKPNDFIYVAGTLESHKK--ADKCGKSSLSYELTVSELNCIA---------QCDQ 171
           + I  LK ND I V+G LES+ K  +D     +L Y++ V+E+N +A         Q  +
Sbjct: 109 TCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYVAAPPSHVLDSQISK 168

Query: 172 ASKSQNSVDMLHEEGYAHRGNYREHLHLWQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTG 231
             K++   D+  EE      + ++ ++LWQVFFS+P++WWDNR  K NPK PDF+HK TG
Sbjct: 169 NPKTKTEDDI--EE------SKKDEIYLWQVFFSNPYDWWDNRRNKKNPKQPDFKHKDTG 228

Query: 232 EALWLRETDPPWIRKQLELLDTKMEEKDQD 250
           EALWL    P WI ++LEL D K    D++
Sbjct: 229 EALWLCSDLPDWITRRLELFDQKNRFYDEE 250

[Close]

BLAST of Lsi08G014390 vs. TAIR 10
Match: AT5G44785.2 (organellar single-stranded DNA binding protein 3 )

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-11
Identity = 50/179 (27.93%), Postives = 81/179 (45.25%), Query Frame = 0


Query: 79  TVRAWTILRAK------LSPDSNCSFR----IGLKLWEDMAESYIERL-KPNDFIYVAGT 138
           T   W +L+ +      L P  N        IG + W+D+ ++  + L   +D   V   
Sbjct: 260 TAPDWALLKLEELKFDVLVPKGNIKLNQLKDIGEESWKDLVQNPDKWLDNRSDKTNVKYP 319

Query: 139 LESHKKADKCGKSSLSYELTVSELNCIAQCDQASKSQNSVDMLHEEGYAHRGNYRE--HL 198
              HK+  +    + S    +S+L  + +  +     N V  L  +    +GN ++    
Sbjct: 320 DFKHKETGEALWMTNSPIWVLSKLPPLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKRE 379

Query: 199 HLWQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTGEALWLRETDPPWIRKQLELLDTKME 245
            +W+    +P +WWDNR  K NPK PDF+HK TGEALW+ ++ P W   +L  L    E
Sbjct: 380 EIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIGDS-PTWALSKLPPLKKNQE 437

[Close]

BLAST of Lsi08G014390 vs. TAIR 10
Match: AT5G44785.1 (organellar single-stranded DNA binding protein 3 )

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-10
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 165 NSVDMLHEEGYAHRGNYRE--HLHLWQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTGEAL 224
           N V  L  +    +GN ++     +W+    +P +WWDNR  K NPK PDF+HK TGEAL
Sbjct: 355 NKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEAL 414

Query: 225 WLRETDPPWIRKQLELLDTKME 245
           W+ ++ P W   +L  L    E
Sbjct: 415 WIGDS-PTWALSKLPPLKKNQE 435

[Close]

BLAST of Lsi08G014390 vs. TAIR 10
Match: AT4G20010.1 (plastid transcriptionally active 9 )

HSP 1 Score: 63.5 bits (153), Expect = 2.8e-10
Identity = 28/57 (49.12%), Postives = 36/57 (63.16%), Query Frame = 0


Query: 188 WQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTGEALWLRETDPPWIRKQLELLDTKME 245
           W+    +P +WWDNR  K N K PDF+HK TGEALWL E+ P W+  +L  +  K E
Sbjct: 312 WKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNES-PTWVLPKLPPVKKKQE 367

[Close]

BLAST of Lsi08G014390 vs. TAIR 10
Match: AT4G20010.2 (plastid transcriptionally active 9 )

HSP 1 Score: 63.5 bits (153), Expect = 2.8e-10
Identity = 28/57 (49.12%), Postives = 36/57 (63.16%), Query Frame = 0


Query: 188 WQVFFSSPHEWWDNRNRKSNPKHPDFRHKSTGEALWLRETDPPWIRKQLELLDTKME 245
           W+    +P +WWDNR  K N K PDF+HK TGEALWL E+ P W+  +L  +  K E
Sbjct: 312 WKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNES-PTWVLPKLPPVKKKQE 367

The following BLAST results are available for this feature:

BLAST of Lsi08G014390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX99	4.7e-34	40.48	Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1	[more]
Q8GWJ4	2.3e-09	39.02	Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB...	[more]
Q8GXH3	4.0e-09	49.12	Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2	[more]
Q9FYJ2	1.1e-06	44.90	Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1	[more]

BLAST of Lsi08G014390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJW3	2.0e-112	78.11	protein OSB1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111454556 P...	[more]
A0A6J1KK72	7.1e-110	76.98	protein OSB1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111496022 PE=...	[more]
A0A6J1CSS2	4.0e-105	75.57	protein OSB1, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111013985 ...	[more]
A0A0A0LNI3	6.9e-105	75.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360660 PE=4 SV=1	[more]
A0A5A7VHQ1	1.4e-102	74.05	Protein OSB1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006260 P...	[more]

BLAST of Lsi08G014390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886148.1	8.6e-126	86.64	protein OSB1, mitochondrial-like [Benincasa hispida]	[more]
XP_022951824.1	4.1e-112	78.11	protein OSB1, mitochondrial-like [Cucurbita moschata]	[more]
KAG7020550.1	4.6e-111	77.74	Protein OSB1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023002011.1	1.5e-109	76.98	protein OSB1, mitochondrial-like [Cucurbita maxima]	[more]
XP_023536822.1	3.3e-109	77.36	protein OSB1, mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi08G014390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47720.1	3.3e-35	40.48	Primosome PriB/single-strand DNA-binding	[more]
AT5G44785.2	2.0e-11	27.93	organellar single-stranded DNA binding protein 3	[more]
AT5G44785.1	1.7e-10	39.02	organellar single-stranded DNA binding protein 3	[more]
AT4G20010.1	2.8e-10	49.12	plastid transcriptionally active 9	[more]
AT4G20010.2	2.8e-10	49.12	plastid transcriptionally active 9	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000424	Primosome PriB/single-strand DNA-binding	PFAM	PF00436	SSB	coord: 59..152 e-value: 1.0E-4 score: 22.3
IPR000424	Primosome PriB/single-strand DNA-binding	PROSITE	PS50935	SSB	coord: 57..155 score: 10.64265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..264
None	No IPR available	PANTHER	PTHR10302:SF18	PROTEIN OSB1, MITOCHONDRIAL	coord: 9..261
IPR011344	Single-stranded DNA-binding protein	PANTHER	PTHR10302	SINGLE-STRANDED DNA-BINDING PROTEIN	coord: 9..261
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 58..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G014390.1	Lsi08G014390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006264	mitochondrial DNA replication
biological_process	GO:0000002	mitochondrial genome maintenance
biological_process	GO:0045910	negative regulation of DNA recombination
biological_process	GO:0051096	positive regulation of helicase activity
biological_process	GO:0006260	DNA replication
cellular_component	GO:0042645	mitochondrial nucleoid
molecular_function	GO:0003697	single-stranded DNA binding