Lsi08G014080 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTGAGGTGTTTAGTTTGGGCGGGGGGAAAGGGAAAGGGAAAGAAGATGGTATGAAACTGAATGATGGTGGAGATGGCGGCTTGGACAATAAAATTCAAGATGGGGATAGAACGAGAGCTGTTTCAGTGACCAAATACAGTCCATTTTGGTCTGAGAGGTTCCACTTTTTGTCTGCTGTGAAACTGGAGGCTGATGCTACTTGTATCGATGTCTTGCCTCTTAGGGATTCTGAGGGTCATAGCAAGTATGTTGCAGTTGGAGATGAGAGAGGGAGAATTTGTGTGTTTGTGAGAAATGGAGATGTTGTGGTTGAGCTTAGTACGATGTCTTAA ATGCCTGAGGTGTTTAGTTTGGGCGGGGGGAAAGGGAAAGGGAAAGAAGATGGTATGAAACTGAATGATGGTGGAGATGGCGGCTTGGACAATAAAATTCAAGATGGGGATAGAACGAGAGCTGTTTCAGTGACCAAATACAGTCCATTTTGGTCTGAGAGGTTCCACTTTTTGTCTGCTGTGAAACTGGAGGCTGATGCTACTTGTATCGATGTCTTGCCTCTTAGGGATTCTGAGGGTCATAGCAAGTATGTTGCAGTTGGAGATGAGAGAGGGAGAATTTGTGTGTTTGTGAGAAATGGAGATGTTGTGGTTGAGCTTAGTACGATGTCTTAA ATGCCTGAGGTGTTTAGTTTGGGCGGGGGGAAAGGGAAAGGGAAAGAAGATGGTATGAAACTGAATGATGGTGGAGATGGCGGCTTGGACAATAAAATTCAAGATGGGGATAGAACGAGAGCTGTTTCAGTGACCAAATACAGTCCATTTTGGTCTGAGAGGTTCCACTTTTTGTCTGCTGTGAAACTGGAGGCTGATGCTACTTGTATCGATGTCTTGCCTCTTAGGGATTCTGAGGGTCATAGCAAGTATGTTGCAGTTGGAGATGAGAGAGGGAGAATTTGTGTGTTTGTGAGAAATGGAGATGTTGTGGTTGAGCTTAGTACGATGTCTTAA MPEVFSLGGGKGKGKEDGMKLNDGGDGGLDNKIQDGDRTRAVSVTKYSPFWSERFHFLSAVKLEADATCIDVLPLRDSEGHSKYVAVGDERGRICVFVRNGDVVVELSTMS Homology
BLAST of Lsi08G014080 vs. ExPASy Swiss-Prot
Match: Q9FRK5 (Uncharacterized membrane protein At1g75140 OS=Arabidopsis thaliana OX=3702 GN=At1g75140 PE=1 SV=3) HSP 1 Score: 110.5 bits (275), Expect = 1.2e-23 Identity = 50/73 (68.49%), Postives = 60/73 (82.19%), Query Frame = 0
BLAST of Lsi08G014080 vs. ExPASy TrEMBL
Match: A0A6J1KBU3 (uncharacterized membrane protein At1g75140-like OS=Cucurbita maxima OX=3661 GN=LOC111491879 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.1e-39 Identity = 91/111 (81.98%), Postives = 94/111 (84.68%), Query Frame = 0
BLAST of Lsi08G014080 vs. ExPASy TrEMBL
Match: A0A6J1CSU7 (uncharacterized membrane protein At1g75140-like OS=Momordica charantia OX=3673 GN=LOC111013986 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 6.2e-39 Identity = 86/111 (77.48%), Postives = 95/111 (85.59%), Query Frame = 0
BLAST of Lsi08G014080 vs. ExPASy TrEMBL
Match: A0A0A0LNK9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361500 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 3.1e-38 Identity = 89/110 (80.91%), Postives = 95/110 (86.36%), Query Frame = 0
BLAST of Lsi08G014080 vs. ExPASy TrEMBL
Match: A0A6J1HC37 (uncharacterized membrane protein At1g75140-like OS=Cucurbita moschata OX=3662 GN=LOC111462650 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 1.2e-37 Identity = 87/111 (78.38%), Postives = 93/111 (83.78%), Query Frame = 0
BLAST of Lsi08G014080 vs. ExPASy TrEMBL
Match: A0A6J1KPQ0 (uncharacterized membrane protein At1g75140-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496113 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 4.4e-37 Identity = 84/109 (77.06%), Postives = 91/109 (83.49%), Query Frame = 0
BLAST of Lsi08G014080 vs. NCBI nr
Match: XP_038885478.1 (uncharacterized membrane protein At1g75140-like [Benincasa hispida]) HSP 1 Score: 180.3 bits (456), Expect = 9.4e-42 Identity = 91/109 (83.49%), Postives = 97/109 (88.99%), Query Frame = 0
BLAST of Lsi08G014080 vs. NCBI nr
Match: XP_022996718.1 (uncharacterized membrane protein At1g75140-like [Cucurbita maxima]) HSP 1 Score: 171.4 bits (433), Expect = 4.4e-39 Identity = 91/111 (81.98%), Postives = 94/111 (84.68%), Query Frame = 0
BLAST of Lsi08G014080 vs. NCBI nr
Match: XP_011649613.2 (uncharacterized membrane protein At1g75140 [Cucumis sativus] >KAE8652103.1 hypothetical protein Csa_022548 [Cucumis sativus]) HSP 1 Score: 170.6 bits (431), Expect = 7.5e-39 Identity = 90/110 (81.82%), Postives = 96/110 (87.27%), Query Frame = 0
BLAST of Lsi08G014080 vs. NCBI nr
Match: XP_022144258.1 (uncharacterized membrane protein At1g75140-like [Momordica charantia]) HSP 1 Score: 169.9 bits (429), Expect = 1.3e-38 Identity = 86/111 (77.48%), Postives = 95/111 (85.59%), Query Frame = 0
BLAST of Lsi08G014080 vs. NCBI nr
Match: XP_023546241.1 (uncharacterized membrane protein At1g75140-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 167.9 bits (424), Expect = 4.8e-38 Identity = 88/111 (79.28%), Postives = 94/111 (84.68%), Query Frame = 0
BLAST of Lsi08G014080 vs. TAIR 10
Match: AT1G19370.1 (unknown protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75140.1); Has 45 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 112.8 bits (281), Expect = 1.7e-25 Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = 0
BLAST of Lsi08G014080 vs. TAIR 10
Match: AT1G75140.1 (unknown protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19370.1); Has 51 Blast hits to 49 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). ) HSP 1 Score: 110.5 bits (275), Expect = 8.5e-25 Identity = 50/73 (68.49%), Postives = 60/73 (82.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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