
Lsi08G013810 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGGTTTTCTTTAATTTGAAATCTATAGCCAGCATGTAGGGAGGAAAATTGACGTTATGTTTCTTTTTTCACCTCTTTATTTGTATTCAAGTGCTGAAATTCGTCTGTTTGAGTGTTTTTTTTTTCAGGTGGGTATGGAAGAGCTTGAGAATATACTGAGGGAGGTGAAATCCTATATACTTTCCTCGCCTGATGTTCTGACTCCGGTTAAGACAATAGCTGGGGGAAGTGTTGCCAACACAATACGAGGATTGAGTGCGGGGTTTGGAGTCAGCTGTGGAATTATTGGCGCCTATGGGGATGATGAGCAAGGAAAATTGTTTGTCTCTAACATGAGCTCCAATGGGGTCAATCTCTCAAGATTGAGGATGATTAAAGGTCCCACAGCTCAGGTCTGCTTCACTCCCTTCATGGAGGGGTGTCCAAATTTGCATTGTGTGTTTATGTCTTTTAAAGTTCTGAGAATGTATTGTAAATTGTACGGCAGTGTGTTTGCCTGGTTGATGCATTGGGCAATCGCACAATGCGACCCTCTCTCGCAAGTGCAGTTAAAGTTCAGGTAACACTACTTTTTTGATTGGGAGTTTGTGTCAGTGTGCGTGTGAGTTTCGAATGCGTTTTGGATAAATTGCTCAGTTTAGTACTTTGTGGTATGCTAAACAGAGGAGATTTGATTACTAAATATACTGACCATCTATTTGTTTTGTCATCTTCAGGGCAATGAACTGACTAGAGATGACTTTAAGGGCTCTAAGGTTAGCGTACTCATATCTTTATTTTCTTTTAACATGTATGACGTGTGTTAAGAAAATAAGAGCGGCCGAAATTGGAAACAGATCAGGGAAACATATTATTATGCTTTTCGGTCTTTCCTGTCCTGTAAAATATTTTCTACTGATTTTATTCTAATTTCCATTGAATCAATTATCAAACTTAAAAGAAATTGGGATGGGGAGGCTTTTGGTAGACTTAATTACTGCCATGTCTTTATTGCAGTGGCTTGTAATGAGATATAGTATATTTAACTTGGAGGTTATTGAAGCGGCTGTAAAGATGGCCAAACAAGAGAGTGTTTTTGTGTCCTTGGATTTGGCCAGTTTTGAGGTACATATTCCTAGACAACATCATTTCTATCATTTGTGTGATTTCAGCTTTGGAGAAGAGGTTGTTATATCATTTGAAAAGAAATGTAAACAAAGTAGCTCACATCTCTATATTTGGCCAGATGGTTCGAGATTTTAGATTACCTCTTCTCCAGCTACTGGAGTCCGGGGACATTGACCTTTGCTTTGCCAATGAAGACGAAGCAAAAGAGTTGATAGGGTGACTGCCTTTGCTTTGAATCTCATTATTCTTCAAACTCAACTGATTTGTAAATTTGAATATCTGCATTACCTCAGCTGTAGGATGTTTCAACTCTTTTGCAAAACGTTGTCTAGTAGATGGCATTAATTTCTGTTACTATATTTAATCTTTACAGGGGTGAGAAAGACGCTGATCCTGAAGTTGCACTAGAATTTCTTGCAAAGCACTGTCAATGGGCTGTCGTGACATTAGGCGCCAATGGTTGTATCGCTAAGCATGGAAAAGAGGTTAGTGATTGATCTTTCCTCCTTTTGGTAACATGTGAAGATTTGATTTTGTGAACAATAGAATATCTTATAAATCGTCTTATGATTGATATATGTGGGGACTGGAGAGGACTGCTTTACTTTAGCTAGGTTCCTTTTCAAGCTTAAACTTAGATCTTTAGCAAAAAGAGAGTTTTTTCGGATAGCTAGTACTTGTGCTTTGCTTTGTTTCGGAATGGGGAGAGGAACAATTTAGCGTTTAGAGGTGTGGAATAGTTTAGGGAGGAAGTTTGTCTGTTGTTAGGTTCTATACCTTCCTCTCACATGATTGGACCACTTTTCTTTAGCTTAGCTTCTTTTTGGGGTTTGTTTTTTTTGTCTGTCCTTTGTATTCTTTCCTTCATTTCAACAGGACGGGAAAGTTTATCGTTGCATCAAGGAAATGTTTTGTTTTATTCTGGTTTCACCTTTTATTTATTTGTTTGGCCCAAAGCGACATACAAAATTCAAGAGATCAAAGAGTGAAACTGAGTTCTGAGATATTATTTCCATGTGGATCATTAGTTATTAAGTTAAATAACTTACCTCAATATATCAGATAGTCCGAGTTCCAGCAATAGGGGAATCAAAGGTGACTGATGCCACTGGAGCAGGTGACTTGTTTGCGAGTGGGTTTTTGTATGGCTTAGTGAAGGGGTTGTCTCTGGAGAAATGCTGTCAGCTTGGATCGTGCAGCGGCGGTTCTGTCATCCGTGCCCTTGGGGGTGAGGTTACCCCAGAAAATTGGCAATGGATGCACAAGCATTTGCAGATCAAAGGGCTTCCTCTCCCTGAGATCCCTCAATGATCAATCATTTTTCTCATGTCGTTGTTGTCCCATCCATTTTCAATGTCTATCAATTTTCTCTTTTTAACAGGCATCTCTTTCAACCTTGGGATGGCTGGACTTTCTTTCAAATTTCAACCCCCTAAAAAAAAAAAGGTTAAATTATTTGAAGTTAGCTGGAGGACCTCTTTGATAATCTCAGGCTTATGTCTCCATCAACAAGATGTAAAAAGTTATCTTTCATTAATGTGATTTCATCTATTTTCAAGCTACTTTTTGGTCCCTAGCTGTGCG ATGTGGGTGGGTATGGAAGAGCTTGAGAATATACTGAGGGAGGTGAAATCCTATATACTTTCCTCGCCTGATGTTCTGACTCCGGTTAAGACAATAGCTGGGGGAAGTGTTGCCAACACAATACGAGGATTGAGTGCGGGGTTTGGAGTCAGCTGTGGAATTATTGGCGCCTATGGGGATGATGAGCAAGGAAAATTGTTTGTCTCTAACATGAGCTCCAATGGGGTCAATCTCTCAAGATTGAGGATGATTAAAGGTCCCACAGCTCAGGTCTGCTTCACTCCCTTCATGGAGGGGTGTCCAAATTTGCATTGTGTGTTTATGTCTTTTAAAGTTCTGAGAATGTATTGTAAATTGTACGGCAGTGTGTTTGCCTGGTTGATGCATTGGGCAATCGCACAATGCGACCCTCTCTCGCAAGTGCAGTTAAAGTTCAGTGTGCGTGTGAGTTTCGAATGCGTTTTGGATAAATTGCTCAGTTTAGTACTTTGTGGTATGCTAAACAGAGGAGATTTGATTACTAAATATACTGACCATCTATTTGGCAATGAACTGACTAGAGATGACTTTAAGGGCTCTAAGTGGCTTGTAATGAGATATAGTATATTTAACTTGGAGGTTATTGAAGCGGCTGTAAAGATGGCCAAACAAGAGATTTTGAGGTACATATTCCTAGACAACATCATTTCTATCATTTGTGTGATTTCAGCTTTGGAGAAGAGGTTGTTATATCATTTGAAAAGAAATGTAAACAAAGTAGCTCACATCTCTATATTTGGCCAGATGGTTCGAGATTTTAGATTACCTCTTCTCCAGCTACTGGAGTCCGGGGACATTGACCTTTGCTTTGCCAATGAAGACGAAGCAAAAGAGTTGATAGGGGGTGAGAAAGACGCTGATCCTGAAGTTGCACTAGAATTTCTTGCAAAGCACTGTCAATGGGCTGTCGTGACATTAGGCGCCAATGGTTGTATCGCTAAGCATGGAAAAGAGATAGTCCGAGTTCCAGCAATAGGGGAATCAAAGGTGACTGATGCCACTGGAGCAGGTGACTTGTTTGCGAGTGGGTTTTTGTATGGCTTAGTGAAGGGGTTGTCTCTGGAGAAATGCTGTCAGCTTGGATCGTGCAGCGGCGGTTCTGTCATCCGTGCCCTTGGGGGTGAGGTTACCCCAGAAAATTGGCAATGGATGCACAAGCATTTGCAGATCAAAGGGCTTCCTCTCCCTGAGATCCCTCAATGATCAATCATTTTTCTCATGTCGTTGTTGTCCCATCCATTTTCAATGTCTATCAATTTTCTCTTTTTAACAGGCATCTCTTTCAACCTTGGGATGGCTGGACTTTCTTTCAAATTTCAACCCCCTAAAAAAAAAAAGGTTAAATTATTTGAAGTTAGCTGGAGGACCTCTTTGATAATCTCAGGCTTATGTCTCCATCAACAAGATGTAAAAAGTTATCTTTCATTAATGTGATTTCATCTATTTTCAAGCTACTTTTTGGTCCCTAGCTGTGCG ATGTGGGTGGGTATGGAAGAGCTTGAGAATATACTGAGGGAGGTGAAATCCTATATACTTTCCTCGCCTGATGTTCTGACTCCGGTTAAGACAATAGCTGGGGGAAGTGTTGCCAACACAATACGAGGATTGAGTGCGGGGTTTGGAGTCAGCTGTGGAATTATTGGCGCCTATGGGGATGATGAGCAAGGAAAATTGTTTGTCTCTAACATGAGCTCCAATGGGGTCAATCTCTCAAGATTGAGGATGATTAAAGGTCCCACAGCTCAGGTCTGCTTCACTCCCTTCATGGAGGGGTGTCCAAATTTGCATTGTGTGTTTATGTCTTTTAAAGTTCTGAGAATGTATTGTAAATTGTACGGCAGTGTGTTTGCCTGGTTGATGCATTGGGCAATCGCACAATGCGACCCTCTCTCGCAAGTGCAGTTAAAGTTCAGTGTGCGTGTGAGTTTCGAATGCGTTTTGGATAAATTGCTCAGTTTAGTACTTTGTGGTATGCTAAACAGAGGAGATTTGATTACTAAATATACTGACCATCTATTTGGCAATGAACTGACTAGAGATGACTTTAAGGGCTCTAAGTGGCTTGTAATGAGATATAGTATATTTAACTTGGAGGTTATTGAAGCGGCTGTAAAGATGGCCAAACAAGAGATTTTGAGGTACATATTCCTAGACAACATCATTTCTATCATTTGTGTGATTTCAGCTTTGGAGAAGAGGTTGTTATATCATTTGAAAAGAAATGTAAACAAAGTAGCTCACATCTCTATATTTGGCCAGATGGTTCGAGATTTTAGATTACCTCTTCTCCAGCTACTGGAGTCCGGGGACATTGACCTTTGCTTTGCCAATGAAGACGAAGCAAAAGAGTTGATAGGGGGTGAGAAAGACGCTGATCCTGAAGTTGCACTAGAATTTCTTGCAAAGCACTGTCAATGGGCTGTCGTGACATTAGGCGCCAATGGTTGTATCGCTAAGCATGGAAAAGAGATAGTCCGAGTTCCAGCAATAGGGGAATCAAAGGTGACTGATGCCACTGGAGCAGGTGACTTGTTTGCGAGTGGGTTTTTGTATGGCTTAGTGAAGGGGTTGTCTCTGGAGAAATGCTGTCAGCTTGGATCGTGCAGCGGCGGTTCTGTCATCCGTGCCCTTGGGGGTGAGGTTACCCCAGAAAATTGGCAATGGATGCACAAGCATTTGCAGATCAAAGGGCTTCCTCTCCCTGAGATCCCTCAATGA MWVGMEELENILREVKSYILSSPDVLTPVKTIAGGSVANTIRGLSAGFGVSCGIIGAYGDDEQGKLFVSNMSSNGVNLSRLRMIKGPTAQVCFTPFMEGCPNLHCVFMSFKVLRMYCKLYGSVFAWLMHWAIAQCDPLSQVQLKFSVRVSFECVLDKLLSLVLCGMLNRGDLITKYTDHLFGNELTRDDFKGSKWLVMRYSIFNLEVIEAAVKMAKQEILRYIFLDNIISIICVISALEKRLLYHLKRNVNKVAHISIFGQMVRDFRLPLLQLLESGDIDLCFANEDEAKELIGGEKDADPEVALEFLAKHCQWAVVTLGANGCIAKHGKEIVRVPAIGESKVTDATGAGDLFASGFLYGLVKGLSLEKCCQLGSCSGGSVIRALGGEVTPENWQWMHKHLQIKGLPLPEIPQ Homology
BLAST of Lsi08G013810 vs. ExPASy Swiss-Prot
Match: D9TT10 (ATP-dependent 6-phosphofructokinase OS=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIMB 9385 / NCA 3814 / NCTC 13789 / WDCM 00135 / 2032) OX=580327 GN=pfkB PE=1 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 5.1e-11 Identity = 39/111 (35.14%), Postives = 62/111 (55.86%), Query Frame = 0
BLAST of Lsi08G013810 vs. ExPASy Swiss-Prot
Match: Q55480 (Uncharacterized sugar kinase slr0537 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0537 PE=3 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.5e-10 Identity = 49/143 (34.27%), Postives = 73/143 (51.05%), Query Frame = 0
BLAST of Lsi08G013810 vs. ExPASy Swiss-Prot
Match: Q9CF42 (Ribokinase OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=rbsK PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 2.2e-09 Identity = 40/111 (36.04%), Postives = 58/111 (52.25%), Query Frame = 0
BLAST of Lsi08G013810 vs. ExPASy Swiss-Prot
Match: Q57849 (Nucleoside kinase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0406 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.4e-08 Identity = 30/87 (34.48%), Postives = 46/87 (52.87%), Query Frame = 0
BLAST of Lsi08G013810 vs. ExPASy Swiss-Prot
Match: O29891 (Uncharacterized sugar kinase AF_0356 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) OX=224325 GN=AF_0356 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 9.0e-08 Identity = 31/70 (44.29%), Postives = 40/70 (57.14%), Query Frame = 0
BLAST of Lsi08G013810 vs. ExPASy TrEMBL
Match: A0A6J1CTD9 (uncharacterized protein LOC111014039 OS=Momordica charantia OX=3673 GN=LOC111014039 PE=4 SV=1) HSP 1 Score: 492.7 bits (1267), Expect = 1.5e-135 Identity = 277/411 (67.40%), Postives = 292/411 (71.05%), Query Frame = 0
BLAST of Lsi08G013810 vs. ExPASy TrEMBL
Match: A0A6J1GJH7 (uncharacterized protein LOC111454413 OS=Cucurbita moschata OX=3662 GN=LOC111454413 PE=4 SV=1) HSP 1 Score: 492.7 bits (1267), Expect = 1.5e-135 Identity = 275/413 (66.59%), Postives = 293/413 (70.94%), Query Frame = 0
BLAST of Lsi08G013810 vs. ExPASy TrEMBL
Match: A0A6J1KQC1 (uncharacterized protein LOC111496250 OS=Cucurbita maxima OX=3661 GN=LOC111496250 PE=4 SV=1) HSP 1 Score: 491.5 bits (1264), Expect = 3.4e-135 Identity = 274/413 (66.34%), Postives = 293/413 (70.94%), Query Frame = 0
BLAST of Lsi08G013810 vs. ExPASy TrEMBL
Match: A0A0A0LPB8 (PfkB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G361810 PE=4 SV=1) HSP 1 Score: 488.4 bits (1256), Expect = 2.9e-134 Identity = 278/414 (67.15%), Postives = 293/414 (70.77%), Query Frame = 0
BLAST of Lsi08G013810 vs. ExPASy TrEMBL
Match: A0A6J1HF87 (uncharacterized protein LOC111462499 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462499 PE=4 SV=1) HSP 1 Score: 485.3 bits (1248), Expect = 2.5e-133 Identity = 274/413 (66.34%), Postives = 291/413 (70.46%), Query Frame = 0
BLAST of Lsi08G013810 vs. NCBI nr
Match: XP_038886551.1 (uncharacterized sugar kinase slr0537 [Benincasa hispida]) HSP 1 Score: 496.9 bits (1278), Expect = 1.7e-136 Identity = 281/414 (67.87%), Postives = 295/414 (71.26%), Query Frame = 0
BLAST of Lsi08G013810 vs. NCBI nr
Match: XP_022951670.1 (uncharacterized protein LOC111454413 [Cucurbita moschata] >KAG6585583.1 hypothetical protein SDJN03_18316, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020498.1 hypothetical protein SDJN02_17183, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 492.7 bits (1267), Expect = 3.2e-135 Identity = 275/413 (66.59%), Postives = 293/413 (70.94%), Query Frame = 0
BLAST of Lsi08G013810 vs. NCBI nr
Match: XP_022144332.1 (uncharacterized protein LOC111014039 [Momordica charantia]) HSP 1 Score: 492.7 bits (1267), Expect = 3.2e-135 Identity = 277/411 (67.40%), Postives = 292/411 (71.05%), Query Frame = 0
BLAST of Lsi08G013810 vs. NCBI nr
Match: XP_023002394.1 (uncharacterized protein LOC111496250 [Cucurbita maxima]) HSP 1 Score: 491.5 bits (1264), Expect = 7.1e-135 Identity = 274/413 (66.34%), Postives = 293/413 (70.94%), Query Frame = 0
BLAST of Lsi08G013810 vs. NCBI nr
Match: XP_023538348.1 (uncharacterized protein LOC111799162 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 489.6 bits (1259), Expect = 2.7e-134 Identity = 274/413 (66.34%), Postives = 292/413 (70.70%), Query Frame = 0
BLAST of Lsi08G013810 vs. TAIR 10
Match: AT1G19600.1 (pfkB-like carbohydrate kinase family protein ) HSP 1 Score: 352.1 bits (902), Expect = 6.3e-97 Identity = 199/409 (48.66%), Postives = 254/409 (62.10%), Query Frame = 0
BLAST of Lsi08G013810 vs. TAIR 10
Match: AT3G09820.1 (adenosine kinase 1 ) HSP 1 Score: 53.9 bits (128), Expect = 3.5e-07 Identity = 37/125 (29.60%), Postives = 59/125 (47.20%), Query Frame = 0
BLAST of Lsi08G013810 vs. TAIR 10
Match: AT3G09820.2 (adenosine kinase 1 ) HSP 1 Score: 53.9 bits (128), Expect = 3.5e-07 Identity = 37/125 (29.60%), Postives = 59/125 (47.20%), Query Frame = 0
BLAST of Lsi08G013810 vs. TAIR 10
Match: AT5G03300.1 (adenosine kinase 2 ) HSP 1 Score: 53.1 bits (126), Expect = 6.0e-07 Identity = 36/125 (28.80%), Postives = 60/125 (48.00%), Query Frame = 0
BLAST of Lsi08G013810 vs. TAIR 10
Match: AT5G58730.1 (pfkB-like carbohydrate kinase family protein ) HSP 1 Score: 52.0 bits (123), Expect = 1.3e-06 Identity = 29/77 (37.66%), Postives = 39/77 (50.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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