Lsi08G013680 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G013680
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	26S proteasome regulatory subunit S10B homolog B
Location	chr08: 21974057 .. 21978410 (+)
RNA-Seq Expression	Lsi08G013680
Synteny	Lsi08G013680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTGGGGAAGAAGGCACACAATTTTTACACAGAGAGAGCATCTAAAGCTTCTTGCTTCCCAAGCTTTCTCTGATAAATCCACCGGAACTTCCACCTCCGTCCACAACTTCGACCCCCAAGAATGGCTGACGGTGAAGAAGCCGCCCGACGTCACACGGCGGTCAATGATTACCGCAAGAAACTCCTTCAGCATAAAGAGTTAGATGCCAGAGTCCGATCTCGTTTGTCCCTCAATACCCAACTTTATAATCTCCTCCTGTTTTTATTTTACTCTGTGAATTCCGGTTCTAGTCGTCCCTAAAGGGGTTTCTTTTTGTTGATTTGAGTAATAGTAAGTTTTGGGTCTTCGGCAATGGCCGTTTTATGGACTATGAGATTGCTGCATCTTGGTTTTAGAGTGTTGTAATTCATCCCCCCGATTTAACTTTGAGTCTTTGAGAAAGTTTGTGTAGATTTGTGTGGGTGTCTTACATTTCTAGGAAGTTTTGGGAAATGGGTTTGTATTATTTCGTAGTTTTCATTTTGCTACATTTCTATTTTGCTTGTGAGATGTGATTACATAAGCTGAAATTCTTGATTGTTTTACGGATTCTTGAGAAATTATCTTTGATTTATGGTATATTCAGTGAGGGAGAATTTGCGAGCTGCAAAGAAGGAATTTAACAAGACAGAAGATGATCTGAAGTCTCTGCAAAGTGTTGGCCAGATTATTGGAGAAGTTCTCAGGCCACTTGACAATGAACGCTGTACTTTTTCTTGTTATTCCTTTGTAATTCTTTTGATATGAAAATTCTCTCAAATTGGTTGATAATGTTGGTAGAGTGTCACTGATTATGTGATTTCAGTGATCGTCAAAGCAAGCAGTGGACCGAGGTATGTGGTTGGATGCCGCAATAAAGTTGATAAGGAAAAATTAACATCTGGTACTAGAGTAGTTCTTGATATGACAACACTCACCATTATGAGGGCTCTTCCACGTGAAGTAAGTTAGATATATTGATTATACTCAATGCTTATAAAGGAAAAGGAAAGAAGGTAGTAGTATCCTCTAATGCACGATTGTTCTAAATCTTTTGATCTAATTTGATCTAATAGGTAGATCCTGTTGTGTATAATATGTTGCACGAAGATCCTGGTAATGTTAGCTATTCTGCTGTGGGTGGCTTATCTGATCAAATTAGAGAACTGAGGGAGTCCATTGAGCTACCTCTCATGAATCCTGAGCTTTTCCTTAGGGTTGGCATCAAACCTCCCAAGGTACTCTCTCTCTCTAAAGCACACAGCTGATGGGTTTGCCAAATCCTGGTTTTTTAGCTAATAGTTTGTGCATTATTAATTACTTACTGGATATTTTTTCCCACTTTGGTTTTAATAAAATTTCCCCATTTCTATTCGAAGGGTGTGCTTCTGTATGGCCCTCCTGGTACTGGCAAGACATTGTTGGCAAGAGCCATTGCAAGCAACATAGATGCCAACTTCCTAAAGGTTGAATTTTTTTCATATACTGAAATGATTTTACTTCTCCTTCTTCCCAGTTAGTGTATAACTATTAGCATTTATCTTTTTTTTAGGTTGTATCGAGTGCCATAATTGATAAGTACATTGGAGAAAGTGCAAGGTTAATACGAGAAATGTTTGGATATGCACGTGATCACCAGGTAAGTACTGATGTGTTATTAACTTCTTTTGGTATGATTCTATACAAAAATTGTGATTTGTAATTCATGCACCACATTCTTTTCTGTGCTTAGCCCTGCATAATTTTTATGGATGAGATTGATGCCATTGGTGGGAGGAGATTCAGTGAGGGAACAAGTGCTGATCGTGAAATTCAGCGAACATTGATGGAGTTACTTAATCAGCTTGATGGTTTTGATCAGCTCGGTAAGGTATGTCCAAATTTTCTGATGACTTGCTTGTTCCTTTTTTGGGAATTCCAGGCCCTTCTCATATATATTTAGATTCCAACGTTTGTTTTGAAGGTATCTTTAATATTTAGATATTCAAGTATCATATGAACATTGGTACTTAAAAACCCTATGAGATAAGGGGTCTTTTAAGTTGAAAGAGTACTATATGTTATTATCGTTGGAATAACATGCAATTGTTTGATGTTACCCTAGACAAATATGGCTGAACAGGTAACTGTTCTTCAGGCGTCTAGATTCTTAGGTTCACAAATTCTTTGCAAATAAATGACCCTTAACCATGTTTCTCATCTGACTTTAAAATGGATGGACATGACTGTACTCTCTTCTTTATCAAGTATTGGTTGGGCTGGTAGTAGAAGGGGTAAACAAATAGGAGAAGTAATGGGATGAAGGCTTGGCGACCACTTACATTAATATTTACATAGGTTCCTCAGAAATTTTAGTGAAGAAAAATAATGTTATGATTTTGTAAGTGGCAATGTTTATTATCTTTTACTATGGTAGCGTTATAGTTTTCTTTTATTGGCACTTTTGTTATTAATTGTGATGACTGTTTATCTATTATTTTGAAAATTTTAATACTACTGAATGAAAATTTTGTTTTTGTTTGTATGCCGAATTTCTAAGGTGGTATAGGGAACTATCCTCCTTGCAGTAACCCGGGATGGAATAGAAATGAAAATTGAAGTCACTGGCCATAGATCAAAAACTCTGTTGAGATTTGATTTTTTTTTTCCCTCCTTCCTCGGGGAGAGGATAGAAACCATATATCACACAAACTCAAAAGAACATGTTGCCTTGTGTAGATTTAAATATTAGGTCTTAGATCTTAATCATGCTCCCTGTTGGAATGCCTTAAATCTGTTAACTGATGCTTCAAACGACAAATAGAATTCGTATTTGACATATTTAATTATTTATAACTATTTATTATTATGACCATATTGTTTAGAGAAGAGCACTATATAAACTCTCTAACTTTAGAGGCGCCACTATTCTGTATTCTGTAACATTCTCTCTAATAAAATTGTTCTCCCTTTGTTCCGTGGACATAGCTAACACACTGTTAGTGAACCACGTAAATCTGTGCATGGATTCTCCTTTATTTTACGTTTTCTGTATTTTTTATTTGTCGGTTTCGTAACACTCCTGACCATGCTATGACTTAATTGTTTGTCTCATTAGTCTAATTTCTTTTATTGCGATCTTTTTTCAAGCCTCGTGTTTTCCTAATGCAAGATGATTAATTTGACAATACCATAGGTCAAAATGATAATGGCTACAAACAGGCCAGATGTTCTGGACCCTGCACTTCTTCGGCCAGGGCGATTGGACCGCAAAATTGAGATTCCATTGCCGAATGAGCAATCCAGAACAGAGATCCTTAAGATTCATGCTGCTGGAATTGCCAAGCATGGTGAGATCGACTATGAAGCTGTCGTAAAGCTTGCAGAGGTAACCCTGCTAGTTTTCTTGTTTATTTATTTGATATTTTTTAGTAGTAACTTTGTCCATAATCTGTAATGCATAAATGATAAAACTATCCTTTGTGTAGGGATTTAATGGAGCTGATTTGCGGAATGTCTGCACTGAAGCTGGAATGTCGGCTATCCGCGCCGAACGTGACTATGTCATCCATGAAGATTTCATGAAGGTAACTTGTTCTTTCCATAGCAGTCTTTAGTCATTGTATTGCAACAGATTCCTACAGAGAGAAGGCCTTTTCTTCTCGTACTCACTTTCATCATCTTGGGATGTTCAGGCAGTACGAAAATTGAACGAAGCAAAGAAACTCGAGTCCAGTGCGCACTATAGCGCCGATTTTGGGAAGGACTGAATCGATGTAATGTAGTTTTGGTAGCCAAAATCTTTGCAAGCATAACATTTTCCTTCCCAGGGAAACGATGCACTCTTGGGATGTATGCAAAATTGAGCTTTTCCTGGTATCACTGGAGTTTTTCTTAGAACTATAGGAACTTGTTGTATCTGATCACAGATGATGATGAACATTCATGGAAATCGAGCCATTCTTCTTTTCTTATTTATTCCCTTTTGCTTGTGGGTTAAACAGATTGAGTTCTTCACCCTGCCTTAACTTTTCTTGTTAATTGTACTCATATTGAAAAGATATAAAGCTGAAGATGAAATGGTTCATTTTGATTTTCATTTACTCAAACATGATCATCTGCTACTCAGTTTACAGAATACACAATTCATTGCAAAGTTTATGCACTGTTTTTGTTTGGAATGTCACTGCTCCCAAGATACAAATGGGATTTGAAGAATCATAAAATTGCTAGAATTCTATCTTTTTGACAATTCCTTGGCTAAGATTAATTGTTCTTCAATGTAGATCTGTTGTTGAGTTTGAATCTGACCATTCTCACGATCTTGTAAAACCAGTAGGCACTGACAAGCTGC

mRNA sequence

AATTTGGGGAAGAAGGCACACAATTTTTACACAGAGAGAGCATCTAAAGCTTCTTGCTTCCCAAGCTTTCTCTGATAAATCCACCGGAACTTCCACCTCCGTCCACAACTTCGACCCCCAAGAATGGCTGACGGTGAAGAAGCCGCCCGACGTCACACGGCGGTCAATGATTACCGCAAGAAACTCCTTCAGCATAAAGAGTTAGATGCCAGAGTCCGATCTCTGAGGGAGAATTTGCGAGCTGCAAAGAAGGAATTTAACAAGACAGAAGATGATCTGAAGTCTCTGCAAAGTGTTGGCCAGATTATTGGAGAAGTTCTCAGGCCACTTGACAATGAACGCTTGATCGTCAAAGCAAGCAGTGGACCGAGGTATGTGGTTGGATGCCGCAATAAAGTTGATAAGGAAAAATTAACATCTGGTACTAGAGTAGTTCTTGATATGACAACACTCACCATTATGAGGGCTCTTCCACGTGAAGTAGATCCTGTTGTGTATAATATGTTGCACGAAGATCCTGGTAATGTTAGCTATTCTGCTGTGGGTGGCTTATCTGATCAAATTAGAGAACTGAGGGAGTCCATTGAGCTACCTCTCATGAATCCTGAGCTTTTCCTTAGGGTTGGCATCAAACCTCCCAAGGGTGTGCTTCTGTATGGCCCTCCTGGTACTGGCAAGACATTGTTGGCAAGAGCCATTGCAAGCAACATAGATGCCAACTTCCTAAAGGTTGTATCGAGTGCCATAATTGATAAGTACATTGGAGAAAGTGCAAGGTTAATACGAGAAATGTTTGGATATGCACGTGATCACCAGCCCTGCATAATTTTTATGGATGAGATTGATGCCATTGGTGGGAGGAGATTCAGTGAGGGAACAAGTGCTGATCGTGAAATTCAGCGAACATTGATGGAGTTACTTAATCAGCTTGATGGTTTTGATCAGCTCGGTAAGGTCAAAATGATAATGGCTACAAACAGGCCAGATGTTCTGGACCCTGCACTTCTTCGGCCAGGGCGATTGGACCGCAAAATTGAGATTCCATTGCCGAATGAGCAATCCAGAACAGAGATCCTTAAGATTCATGCTGCTGGAATTGCCAAGCATGGTGAGATCGACTATGAAGCTGTCGTAAAGCTTGCAGAGGGATTTAATGGAGCTGATTTGCGGAATGTCTGCACTGAAGCTGGAATGTCGGCTATCCGCGCCGAACGTGACTATGTCATCCATGAAGATTTCATGAAGGCAGTACGAAAATTGAACGAAGCAAAGAAACTCGAGTCCAGTGCGCACTATAGCGCCGATTTTGGGAAGGACTGAATCGATGTAATGTAGTTTTGGTAGCCAAAATCTTTGCAAGCATAACATTTTCCTTCCCAGGGAAACGATGCACTCTTGGGATGTATGCAAAATTGAGCTTTTCCTGGTATCACTGGAGTTTTTCTTAGAACTATAGGAACTTGTTGTATCTGATCACAGATGATGATGAACATTCATGGAAATCGAGCCATTCTTCTTTTCTTATTTATTCCCTTTTGCTTGTGGGTTAAACAGATTGAGTTCTTCACCCTGCCTTAACTTTTCTTGTTAATTGTACTCATATTGAAAAGATATAAAGCTGAAGATGAAATGGTTCATTTTGATTTTCATTTACTCAAACATGATCATCTGCTACTCAGTTTACAGAATACACAATTCATTGCAAAGTTTATGCACTGTTTTTGTTTGGAATGTCACTGCTCCCAAGATACAAATGGGATTTGAAGAATCATAAAATTGCTAGAATTCTATCTTTTTGACAATTCCTTGGCTAAGATTAATTGTTCTTCAATGTAGATCTGTTGTTGAGTTTGAATCTGACCATTCTCACGATCTTGTAAAACCAGTAGGCACTGACAAGCTGC

Coding sequence (CDS)

ATGGCTGACGGTGAAGAAGCCGCCCGACGTCACACGGCGGTCAATGATTACCGCAAGAAACTCCTTCAGCATAAAGAGTTAGATGCCAGAGTCCGATCTCTGAGGGAGAATTTGCGAGCTGCAAAGAAGGAATTTAACAAGACAGAAGATGATCTGAAGTCTCTGCAAAGTGTTGGCCAGATTATTGGAGAAGTTCTCAGGCCACTTGACAATGAACGCTTGATCGTCAAAGCAAGCAGTGGACCGAGGTATGTGGTTGGATGCCGCAATAAAGTTGATAAGGAAAAATTAACATCTGGTACTAGAGTAGTTCTTGATATGACAACACTCACCATTATGAGGGCTCTTCCACGTGAAGTAGATCCTGTTGTGTATAATATGTTGCACGAAGATCCTGGTAATGTTAGCTATTCTGCTGTGGGTGGCTTATCTGATCAAATTAGAGAACTGAGGGAGTCCATTGAGCTACCTCTCATGAATCCTGAGCTTTTCCTTAGGGTTGGCATCAAACCTCCCAAGGGTGTGCTTCTGTATGGCCCTCCTGGTACTGGCAAGACATTGTTGGCAAGAGCCATTGCAAGCAACATAGATGCCAACTTCCTAAAGGTTGTATCGAGTGCCATAATTGATAAGTACATTGGAGAAAGTGCAAGGTTAATACGAGAAATGTTTGGATATGCACGTGATCACCAGCCCTGCATAATTTTTATGGATGAGATTGATGCCATTGGTGGGAGGAGATTCAGTGAGGGAACAAGTGCTGATCGTGAAATTCAGCGAACATTGATGGAGTTACTTAATCAGCTTGATGGTTTTGATCAGCTCGGTAAGGTCAAAATGATAATGGCTACAAACAGGCCAGATGTTCTGGACCCTGCACTTCTTCGGCCAGGGCGATTGGACCGCAAAATTGAGATTCCATTGCCGAATGAGCAATCCAGAACAGAGATCCTTAAGATTCATGCTGCTGGAATTGCCAAGCATGGTGAGATCGACTATGAAGCTGTCGTAAAGCTTGCAGAGGGATTTAATGGAGCTGATTTGCGGAATGTCTGCACTGAAGCTGGAATGTCGGCTATCCGCGCCGAACGTGACTATGTCATCCATGAAGATTTCATGAAGGCAGTACGAAAATTGAACGAAGCAAAGAAACTCGAGTCCAGTGCGCACTATAGCGCCGATTTTGGGAAGGACTGA

Protein sequence

MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD

Homology

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BLAST of Lsi08G013680 vs. ExPASy Swiss-Prot
Match: Q9MAK9 (26S proteasome regulatory subunit S10B homolog B OS=Arabidopsis thaliana OX=3702 GN=RPT4B PE=1 SV=1)

HSP 1 Score: 734.9 bits (1896), Expect = 4.7e-211
Identity = 373/399 (93.48%), Postives = 389/399 (97.49%), Query Frame = 0


Query: 1   MADGEEAARRHT-AVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVG 60
           M+DG++AARR T AV DYRKKLL HKEL++RVR+ RENLRAAKKEFNKTEDDLKSLQSVG
Sbjct: 1   MSDGDDAARRRTAAVTDYRKKLLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSVG 60

Query: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120
           QIIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDKEKLTSGTRVVLDMTTLTIMRALPRE
Sbjct: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120

Query: 121 VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180
           VDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
Sbjct: 121 VDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180

Query: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE 240
           PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDE
Sbjct: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDE 240

Query: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 300
           IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR
Sbjct: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 300

Query: 301 LDRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA 360
           LDRKIEIPLPNEQSR EILKIHA+GIAKHGEIDYEA+VKL EGFNGADLRN+CTEAGM A
Sbjct: 301 LDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFA 360

Query: 361 IRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 399
           IRAERDYVIHEDFMKAVRKL+EAKKLESS+HY+ADFGK+
Sbjct: 361 IRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399

[Close]

BLAST of Lsi08G013680 vs. ExPASy Swiss-Prot
Match: Q9SEI3 (26S proteasome regulatory subunit 10B homolog A OS=Arabidopsis thaliana OX=3702 GN=RPT4A PE=1 SV=1)

HSP 1 Score: 728.4 bits (1879), Expect = 4.4e-209
Identity = 370/399 (92.73%), Postives = 387/399 (96.99%), Query Frame = 0


Query: 1   MADGEEAARRHT-AVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVG 60
           M D +E+ RR T AV++YRKKLLQHKEL++RVR+ RENLR AKKEFNKTEDDLKSLQSVG
Sbjct: 1   MTDVDESVRRRTAAVSEYRKKLLQHKELESRVRTARENLRGAKKEFNKTEDDLKSLQSVG 60

Query: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120
           QIIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDKEKLTSGTRVVLDMTTLTIMRALPRE
Sbjct: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120

Query: 121 VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180
           VDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
Sbjct: 121 VDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180

Query: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE 240
           PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDE
Sbjct: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDE 240

Query: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 300
           IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD LGKVKMIMATNRPDVLDPALLRPGR
Sbjct: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGR 300

Query: 301 LDRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA 360
           LDRKIEIPLPNEQSR +ILKIHAAGIAKHGEIDYEA+VKLAEGFNGADLRN+CTEAGM A
Sbjct: 301 LDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFA 360

Query: 361 IRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 399
           IRAERDYVIHEDFMKAVRKL+EAKKLESS+HY+ADFGK+
Sbjct: 361 IRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399

[Close]

BLAST of Lsi08G013680 vs. ExPASy Swiss-Prot
Match: P62333 (26S proteasome regulatory subunit 10B OS=Homo sapiens OX=9606 GN=PSMC6 PE=1 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 2.8e-171
Identity = 298/382 (78.01%), Postives = 336/382 (87.96%), Query Frame = 0


Query: 10  RHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPL 69
           R  A+ DYRKKLL+HKE+D R++ LRE L+   K++ K+E+DLK+LQSVGQI+GEVL+ L
Sbjct: 5   RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64

Query: 70  DNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLH 129
             E+ IVKA++GPRYVVGCR ++DK KL  GTRV LDMTTLTIMR LPREVDP+VYNM H
Sbjct: 65  TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124

Query: 130 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 189
           EDPGNVSYS +GGLS+QIRELRE IELPL NPELF RVGI PPKG LLYGPPGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184

Query: 190 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS 249
           RA+AS +D NFLKVVSS+I+DKYIGESARLIREMF YARDHQPCIIFMDEIDAIGGRRFS
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 244

Query: 250 EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 309
           EGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNRPD LDPALLRPGRLDRKI I LP
Sbjct: 245 EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLP 304

Query: 310 NEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIH 369
           NEQ+R +ILKIHA  I KHGEIDYEA+VKL++GFNGADLRNVCTEAGM AIRA+ D+V+ 
Sbjct: 305 NEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQ 364

Query: 370 EDFMKAVRKLNEAKKLESSAHY 392
           EDFMKAVRK+ ++KKLES   Y
Sbjct: 365 EDFMKAVRKVADSKKLESKLDY 386

[Close]

BLAST of Lsi08G013680 vs. ExPASy Swiss-Prot
Match: P62335 (26S proteasome regulatory subunit 10B OS=Ictidomys tridecemlineatus OX=43179 GN=PSMC6 PE=2 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 2.8e-171
Identity = 298/382 (78.01%), Postives = 336/382 (87.96%), Query Frame = 0


Query: 10  RHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPL 69
           R  A+ DYRKKLL+HKE+D R++ LRE L+   K++ K+E+DLK+LQSVGQI+GEVL+ L
Sbjct: 5   RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64

Query: 70  DNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLH 129
             E+ IVKA++GPRYVVGCR ++DK KL  GTRV LDMTTLTIMR LPREVDP+VYNM H
Sbjct: 65  TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124

Query: 130 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 189
           EDPGNVSYS +GGLS+QIRELRE IELPL NPELF RVGI PPKG LLYGPPGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184

Query: 190 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS 249
           RA+AS +D NFLKVVSS+I+DKYIGESARLIREMF YARDHQPCIIFMDEIDAIGGRRFS
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 244

Query: 250 EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 309
           EGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNRPD LDPALLRPGRLDRKI I LP
Sbjct: 245 EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLP 304

Query: 310 NEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIH 369
           NEQ+R +ILKIHA  I KHGEIDYEA+VKL++GFNGADLRNVCTEAGM AIRA+ D+V+ 
Sbjct: 305 NEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQ 364

Query: 370 EDFMKAVRKLNEAKKLESSAHY 392
           EDFMKAVRK+ ++KKLES   Y
Sbjct: 365 EDFMKAVRKVADSKKLESKLDY 386

[Close]

BLAST of Lsi08G013680 vs. ExPASy Swiss-Prot
Match: P62334 (26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 2.8e-171
Identity = 298/382 (78.01%), Postives = 336/382 (87.96%), Query Frame = 0


Query: 10  RHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPL 69
           R  A+ DYRKKLL+HKE+D R++ LRE L+   K++ K+E+DLK+LQSVGQI+GEVL+ L
Sbjct: 5   RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64

Query: 70  DNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLH 129
             E+ IVKA++GPRYVVGCR ++DK KL  GTRV LDMTTLTIMR LPREVDP+VYNM H
Sbjct: 65  TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124

Query: 130 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 189
           EDPGNVSYS +GGLS+QIRELRE IELPL NPELF RVGI PPKG LLYGPPGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184

Query: 190 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS 249
           RA+AS +D NFLKVVSS+I+DKYIGESARLIREMF YARDHQPCIIFMDEIDAIGGRRFS
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 244

Query: 250 EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 309
           EGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNRPD LDPALLRPGRLDRKI I LP
Sbjct: 245 EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLP 304

Query: 310 NEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIH 369
           NEQ+R +ILKIHA  I KHGEIDYEA+VKL++GFNGADLRNVCTEAGM AIRA+ D+V+ 
Sbjct: 305 NEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQ 364

Query: 370 EDFMKAVRKLNEAKKLESSAHY 392
           EDFMKAVRK+ ++KKLES   Y
Sbjct: 365 EDFMKAVRKVADSKKLESKLDY 386

[Close]

BLAST of Lsi08G013680 vs. ExPASy TrEMBL
Match: A0A5A7VFU9 (26S protease regulatory subunit S10B-like protein B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005430 PE=3 SV=1)

HSP 1 Score: 774.2 bits (1998), Expect = 2.6e-220
Identity = 396/398 (99.50%), Postives = 397/398 (99.75%), Query Frame = 0


Query: 1   MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MAD E+AARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADSEDAARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360
           DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 399
           RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 398

[Close]

BLAST of Lsi08G013680 vs. ExPASy TrEMBL
Match: A0A1S3BAK9 (26S protease regulatory subunit S10B homolog B OS=Cucumis melo OX=3656 GN=LOC103487997 PE=3 SV=1)

HSP 1 Score: 774.2 bits (1998), Expect = 2.6e-220
Identity = 396/398 (99.50%), Postives = 397/398 (99.75%), Query Frame = 0


Query: 1   MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MAD E+AARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADSEDAARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360
           DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 399
           RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 398

[Close]

BLAST of Lsi08G013680 vs. ExPASy TrEMBL
Match: A0A0A0LNP0 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362420 PE=3 SV=1)

HSP 1 Score: 773.9 bits (1997), Expect = 3.3e-220
Identity = 395/398 (99.25%), Postives = 398/398 (100.00%), Query Frame = 0


Query: 1   MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MADGE+AARRHTAVNDYRKKLLQHKEL+ARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEDAARRHTAVNDYRKKLLQHKELEARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360
           DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 399
           RAERDYVIHEDFMKAVRKLNEAKKLESSAHY+ADFGKD
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGKD 398

[Close]

BLAST of Lsi08G013680 vs. ExPASy TrEMBL
Match: A0A0A0LL40 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362430 PE=3 SV=1)

HSP 1 Score: 772.3 bits (1993), Expect = 9.7e-220
Identity = 394/398 (98.99%), Postives = 396/398 (99.50%), Query Frame = 0


Query: 1   MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLR AKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK+KLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKDKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNMLHEDPGN+SYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360
           DRKIEIPLPNEQSR EILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 399
           RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 398

[Close]

BLAST of Lsi08G013680 vs. ExPASy TrEMBL
Match: A0A1S3BB45 (26S protease regulatory subunit S10B homolog B-like OS=Cucumis melo OX=3656 GN=LOC103488000 PE=3 SV=1)

HSP 1 Score: 772.3 bits (1993), Expect = 9.7e-220
Identity = 394/398 (98.99%), Postives = 396/398 (99.50%), Query Frame = 0


Query: 1   MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLR AKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK+KLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKDKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360
           DRKIEIPLPNEQSR EILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 399
           RAERDYV+HEDFMKAVRKLNEAKKLESSAHYSADFGKD
Sbjct: 361 RAERDYVVHEDFMKAVRKLNEAKKLESSAHYSADFGKD 398

[Close]

BLAST of Lsi08G013680 vs. NCBI nr
Match: XP_038886578.1 (26S proteasome regulatory subunit S10B homolog B [Benincasa hispida])

HSP 1 Score: 777.7 bits (2007), Expect = 4.8e-221
Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0


Query: 1   MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360
           DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 399
           RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 398

[Close]

BLAST of Lsi08G013680 vs. NCBI nr
Match: XP_008444751.1 (PREDICTED: 26S protease regulatory subunit S10B homolog B [Cucumis melo] >KAA0065206.1 26S protease regulatory subunit S10B-like protein B [Cucumis melo var. makuwa])

HSP 1 Score: 774.2 bits (1998), Expect = 5.3e-220
Identity = 396/398 (99.50%), Postives = 397/398 (99.75%), Query Frame = 0


Query: 1   MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MAD E+AARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADSEDAARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360
           DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 399
           RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 398

[Close]

BLAST of Lsi08G013680 vs. NCBI nr
Match: XP_004152678.1 (26S proteasome regulatory subunit S10B homolog B [Cucumis sativus] >KGN62629.1 hypothetical protein Csa_022344 [Cucumis sativus])

HSP 1 Score: 773.9 bits (1997), Expect = 6.9e-220
Identity = 395/398 (99.25%), Postives = 398/398 (100.00%), Query Frame = 0


Query: 1   MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MADGE+AARRHTAVNDYRKKLLQHKEL+ARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEDAARRHTAVNDYRKKLLQHKELEARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360
           DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 399
           RAERDYVIHEDFMKAVRKLNEAKKLESSAHY+ADFGKD
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGKD 398

[Close]

BLAST of Lsi08G013680 vs. NCBI nr
Match: XP_038886580.1 (26S proteasome regulatory subunit S10B homolog B-like [Benincasa hispida])

HSP 1 Score: 772.7 bits (1994), Expect = 1.5e-219
Identity = 395/398 (99.25%), Postives = 396/398 (99.50%), Query Frame = 0


Query: 1   MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLR AKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK+KLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKDKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360
           DRKIEIPLPNEQSR EILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 399
           RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 398

[Close]

BLAST of Lsi08G013680 vs. NCBI nr
Match: XP_008444753.1 (PREDICTED: 26S protease regulatory subunit S10B homolog B-like [Cucumis melo])

HSP 1 Score: 772.3 bits (1993), Expect = 2.0e-219
Identity = 394/398 (98.99%), Postives = 396/398 (99.50%), Query Frame = 0


Query: 1   MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLR AKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDK+KLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKDKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360
           DRKIEIPLPNEQSR EILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 399
           RAERDYV+HEDFMKAVRKLNEAKKLESSAHYSADFGKD
Sbjct: 361 RAERDYVVHEDFMKAVRKLNEAKKLESSAHYSADFGKD 398

[Close]

BLAST of Lsi08G013680 vs. TAIR 10
Match: AT1G45000.1 (AAA-type ATPase family protein )

HSP 1 Score: 734.9 bits (1896), Expect = 3.3e-212
Identity = 373/399 (93.48%), Postives = 389/399 (97.49%), Query Frame = 0


Query: 1   MADGEEAARRHT-AVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVG 60
           M+DG++AARR T AV DYRKKLL HKEL++RVR+ RENLRAAKKEFNKTEDDLKSLQSVG
Sbjct: 1   MSDGDDAARRRTAAVTDYRKKLLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSVG 60

Query: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120
           QIIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDKEKLTSGTRVVLDMTTLTIMRALPRE
Sbjct: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120

Query: 121 VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180
           VDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
Sbjct: 121 VDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180

Query: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE 240
           PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDE
Sbjct: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDE 240

Query: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 300
           IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR
Sbjct: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 300

Query: 301 LDRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA 360
           LDRKIEIPLPNEQSR EILKIHA+GIAKHGEIDYEA+VKL EGFNGADLRN+CTEAGM A
Sbjct: 301 LDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFA 360

Query: 361 IRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 399
           IRAERDYVIHEDFMKAVRKL+EAKKLESS+HY+ADFGK+
Sbjct: 361 IRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399

[Close]

BLAST of Lsi08G013680 vs. TAIR 10
Match: AT5G43010.1 (regulatory particle triple-A ATPase 4A )

HSP 1 Score: 728.4 bits (1879), Expect = 3.1e-210
Identity = 370/399 (92.73%), Postives = 387/399 (96.99%), Query Frame = 0


Query: 1   MADGEEAARRHT-AVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVG 60
           M D +E+ RR T AV++YRKKLLQHKEL++RVR+ RENLR AKKEFNKTEDDLKSLQSVG
Sbjct: 1   MTDVDESVRRRTAAVSEYRKKLLQHKELESRVRTARENLRGAKKEFNKTEDDLKSLQSVG 60

Query: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120
           QIIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDKEKLTSGTRVVLDMTTLTIMRALPRE
Sbjct: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120

Query: 121 VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180
           VDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
Sbjct: 121 VDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180

Query: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE 240
           PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDE
Sbjct: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDE 240

Query: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 300
           IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD LGKVKMIMATNRPDVLDPALLRPGR
Sbjct: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGR 300

Query: 301 LDRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA 360
           LDRKIEIPLPNEQSR +ILKIHAAGIAKHGEIDYEA+VKLAEGFNGADLRN+CTEAGM A
Sbjct: 301 LDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFA 360

Query: 361 IRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 399
           IRAERDYVIHEDFMKAVRKL+EAKKLESS+HY+ADFGK+
Sbjct: 361 IRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399

[Close]

BLAST of Lsi08G013680 vs. TAIR 10
Match: AT1G45000.2 (AAA-type ATPase family protein )

HSP 1 Score: 588.2 bits (1515), Expect = 5.0e-168
Identity = 313/399 (78.45%), Postives = 327/399 (81.95%), Query Frame = 0


Query: 1   MADGEEAARRHT-AVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVG 60
           M+DG++AARR T AV DYRKKLL HKEL++RVR+ RENLRAAKKEFNKTEDDLKSLQSVG
Sbjct: 1   MSDGDDAARRRTAAVTDYRKKLLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSVG 60

Query: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120
           QIIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDKEKLTSGTRVVLDMTTLTIMRALPRE
Sbjct: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120

Query: 121 VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180
           VDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
Sbjct: 121 VDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180

Query: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE 240
           PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDE
Sbjct: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDE 240

Query: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 300
           IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGK                      
Sbjct: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGK---------------------- 300

Query: 301 LDRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA 360
                                                     GFNGADLRN+CTEAGM A
Sbjct: 301 ------------------------------------------GFNGADLRNICTEAGMFA 335

Query: 361 IRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 399
           IRAERDYVIHEDFMKAVRKL+EAKKLESS+HY+ADFGK+
Sbjct: 361 IRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 335

[Close]

BLAST of Lsi08G013680 vs. TAIR 10
Match: AT5G20000.1 (AAA-type ATPase family protein )

HSP 1 Score: 331.6 bits (849), Expect = 8.4e-91
Identity = 175/358 (48.88%), Postives = 237/358 (66.20%), Query Frame = 0


Query: 23  QHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGP 82
           Q  EL++RVR LRE              +L+ LQ  G  +GEV++ +   +++VK     
Sbjct: 60  QRNELNSRVRMLRE--------------ELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEG 119

Query: 83  RYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGG 142
           +YVV     +D  KLT  TRV L   +  +   LP +VDP+V  M  E   + +Y  +GG
Sbjct: 120 KYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGG 179

Query: 143 LSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLK 202
           L  QI+E++E IELP+ +PELF  +GI  PKGVLLYGPPGTGKTLLARA+A + D  F++
Sbjct: 180 LDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 239

Query: 203 VVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRT 262
           V  S ++ KYIGE +R++RE+F  AR+H P IIFMDEID+IG  R   G+ + D E+QRT
Sbjct: 240 VSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRT 299

Query: 263 LMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRTEILKIH 322
           ++ELLNQLDGF+   K+K++MATNR D+LD ALLRPGR+DRKIE P PNE+SR +ILKIH
Sbjct: 300 MLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIH 359

Query: 323 AAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 380
           +  +     ID + + +   G +GA+L+ VCTEAGM A+R  R +V  EDF  AV K+
Sbjct: 360 SRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKV 403

[Close]

BLAST of Lsi08G013680 vs. TAIR 10
Match: AT5G19990.1 (regulatory particle triple-A ATPase 6A )

HSP 1 Score: 331.3 bits (848), Expect = 1.1e-90
Identity = 175/366 (47.81%), Postives = 240/366 (65.57%), Query Frame = 0


Query: 15  NDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERL 74
           N+  +   Q  EL++RVR LRE              +L+ LQ  G  +GEV++ +   ++
Sbjct: 52  NNLNRLEAQRNELNSRVRMLRE--------------ELQLLQEPGSYVGEVVKVMGKNKV 111

Query: 75  IVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGN 134
           +VK     +YVV     +D  K+T  TRV L   +  +   LP +VDP+V  M  E   +
Sbjct: 112 LVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPD 171

Query: 135 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 194
            +Y  +GGL  QI+E++E IELP+ +PELF  +GI  PKGVLLYGPPGTGKTLLARA+A 
Sbjct: 172 STYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 231

Query: 195 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT-S 254
           + D  F++V  S ++ KYIGE +R++RE+F  AR+H P IIFMDEID+IG  R   G+ +
Sbjct: 232 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGN 291

Query: 255 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 314
            D E+QRT++ELLNQLDGF+   K+K++MATNR D+LD ALLRPGR+DRKIE P PNE+S
Sbjct: 292 GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEES 351

Query: 315 RTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFM 374
           R +ILKIH+  +     ID + + +   G +GA+L+ VCTEAGM A+R  R +V  EDF 
Sbjct: 352 RFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFE 403

Query: 375 KAVRKL 380
            AV K+
Sbjct: 412 MAVAKV 403

The following BLAST results are available for this feature:

BLAST of Lsi08G013680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MAK9	4.7e-211	93.48	26S proteasome regulatory subunit S10B homolog B OS=Arabidopsis thaliana OX=3702...	[more]
Q9SEI3	4.4e-209	92.73	26S proteasome regulatory subunit 10B homolog A OS=Arabidopsis thaliana OX=3702 ...	[more]
P62333	2.8e-171	78.01	26S proteasome regulatory subunit 10B OS=Homo sapiens OX=9606 GN=PSMC6 PE=1 SV=1	[more]
P62335	2.8e-171	78.01	26S proteasome regulatory subunit 10B OS=Ictidomys tridecemlineatus OX=43179 GN=...	[more]
P62334	2.8e-171	78.01	26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=...	[more]

BLAST of Lsi08G013680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VFU9	2.6e-220	99.50	26S protease regulatory subunit S10B-like protein B OS=Cucumis melo var. makuwa ...	[more]
A0A1S3BAK9	2.6e-220	99.50	26S protease regulatory subunit S10B homolog B OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0LNP0	3.3e-220	99.25	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362420 PE=3 SV...	[more]
A0A0A0LL40	9.7e-220	98.99	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362430 PE=3 SV...	[more]
A0A1S3BB45	9.7e-220	98.99	26S protease regulatory subunit S10B homolog B-like OS=Cucumis melo OX=3656 GN=L...	[more]

BLAST of Lsi08G013680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886578.1	4.8e-221	100.00	26S proteasome regulatory subunit S10B homolog B [Benincasa hispida]	[more]
XP_008444751.1	5.3e-220	99.50	PREDICTED: 26S protease regulatory subunit S10B homolog B [Cucumis melo] >KAA006...	[more]
XP_004152678.1	6.9e-220	99.25	26S proteasome regulatory subunit S10B homolog B [Cucumis sativus] >KGN62629.1 h...	[more]
XP_038886580.1	1.5e-219	99.25	26S proteasome regulatory subunit S10B homolog B-like [Benincasa hispida]	[more]
XP_008444753.1	2.0e-219	98.99	PREDICTED: 26S protease regulatory subunit S10B homolog B-like [Cucumis melo]	[more]

BLAST of Lsi08G013680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G45000.1	3.3e-212	93.48	AAA-type ATPase family protein	[more]
AT5G43010.1	3.1e-210	92.73	regulatory particle triple-A ATPase 4A	[more]
AT1G45000.2	5.0e-168	78.45	AAA-type ATPase family protein	[more]
AT5G20000.1	8.4e-91	48.88	AAA-type ATPase family protein	[more]
AT5G19990.1	1.1e-90	47.81	regulatory particle triple-A ATPase 6A	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 24..58
None	No IPR available	GENE3D	2.40.50.140		coord: 23..127 e-value: 1.0E-31 score: 111.0
None	No IPR available	GENE3D	1.10.8.60		coord: 309..379 e-value: 1.6E-21 score: 78.0
None	No IPR available	PANTHER	PTHR23073	26S PROTEASOME REGULATORY SUBUNIT	coord: 4..385
None	No IPR available	PANTHER	PTHR23073:SF104	SUBFAMILY NOT NAMED	coord: 4..385
None	No IPR available	CDD	cd00009	AAA	coord: 141..308 e-value: 1.53096E-26 score: 101.839
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 171..310 e-value: 2.6E-21 score: 86.8
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 175..308 e-value: 4.2E-42 score: 143.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 128..308 e-value: 1.1E-66 score: 226.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 135..383
IPR041569	AAA ATPase, AAA+ lid domain	PFAM	PF17862	AAA_lid_3	coord: 331..373 e-value: 2.3E-10 score: 40.1
IPR032501	Proteasomal ATPase OB C-terminal domain	PFAM	PF16450	Prot_ATP_ID_OB	coord: 62..117 e-value: 6.9E-10 score: 38.8
IPR005937	26S proteasome regulatory subunit P45-like	TIGRFAM	TIGR01242	TIGR01242	coord: 22..379 e-value: 3.3E-136 score: 452.1
IPR003960	ATPase, AAA-type, conserved site	PROSITE	PS00674	AAA	coord: 278..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G013680.1	Lsi08G013680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901800	positive regulation of proteasomal protein catabolic process
biological_process	GO:0045899	positive regulation of RNA polymerase II transcription preinitiation complex assembly
biological_process	GO:0030433	ubiquitin-dependent ERAD pathway
biological_process	GO:0030163	protein catabolic process
cellular_component	GO:0031597	cytosolic proteasome complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0008540	proteasome regulatory particle, base subcomplex
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0036402	proteasome-activating activity