Lsi08G013500 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G013500
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	B3 domain-containing protein
Location	chr08: 21790566 .. 21791147 (+)
RNA-Seq Expression	Lsi08G013500
Synteny	Lsi08G013500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATGGGGATGATTCAACCAGGCCTTCCTTTAGGGTTTAATGGAATCCACATTCCTCGGAGGAAGAGGTCCTGCTTTGTCCAATCGAAGCCTGAAGATGACGATGACGGAGCCTCCATTTCCATGATGGAGGTGGCCAATATAATGATCGCCATGGCCAACGGTGGATTCTGCAAAAGGAAGAGGAAGAAACCTTCGACGGTGAAACAGAGGAAGAAATCGAGGGAAAAGGAAATGGAGTTGGGGAAAAGTCCGCCGGAGATGCCGGCGGCGATGAGAGATCGGATTATGGGGAAGGGCGGGTATGAAATCGAATTGGTGATTCAAAAGCAACTTGAAGAGAGTGATGTGAACAGAAACCATGGGCGATTGAGTCTTCCGGCGAAGAAGGTGAGAAGGGAATTCTTGAGAGAAGAAGAAAGAAAAGTGTTGGATGAAGAAAATGGGAATAAGAAGAAGAAGAAGAAGAAGAAGGGAATGGAAGTGGGAATTATGGATTCTCTTCTCCAAGAAAGCTCAATTTGGTTGAAGAAATGGAAGATTGGGAGTGGTAAGGTTTATTGTTTGATGAACAATTGA

mRNA sequence

ATGGGAATGGGGATGATTCAACCAGGCCTTCCTTTAGGGTTTAATGGAATCCACATTCCTCGGAGGAAGAGGTCCTGCTTTGTCCAATCGAAGCCTGAAGATGACGATGACGGAGCCTCCATTTCCATGATGGAGGTGGCCAATATAATGATCGCCATGGCCAACGGTGGATTCTGCAAAAGGAAGAGGAAGAAACCTTCGACGGTGAAACAGAGGAAGAAATCGAGGGAAAAGGAAATGGAGTTGGGGAAAAGTCCGCCGGAGATGCCGGCGGCGATGAGAGATCGGATTATGGGGAAGGGCGGGTATGAAATCGAATTGGTGATTCAAAAGCAACTTGAAGAGAGTGATGTGAACAGAAACCATGGGCGATTGAGTCTTCCGGCGAAGAAGGTGAGAAGGGAATTCTTGAGAGAAGAAGAAAGAAAAGTGTTGGATGAAGAAAATGGGAATAAGAAGAAGAAGAAGAAGAAGAAGGGAATGGAAGTGGGAATTATGGATTCTCTTCTCCAAGAAAGCTCAATTTGGTTGAAGAAATGGAAGATTGGGAGTGGTAAGGTTTATTGTTTGATGAACAATTGA

Coding sequence (CDS)

ATGGGAATGGGGATGATTCAACCAGGCCTTCCTTTAGGGTTTAATGGAATCCACATTCCTCGGAGGAAGAGGTCCTGCTTTGTCCAATCGAAGCCTGAAGATGACGATGACGGAGCCTCCATTTCCATGATGGAGGTGGCCAATATAATGATCGCCATGGCCAACGGTGGATTCTGCAAAAGGAAGAGGAAGAAACCTTCGACGGTGAAACAGAGGAAGAAATCGAGGGAAAAGGAAATGGAGTTGGGGAAAAGTCCGCCGGAGATGCCGGCGGCGATGAGAGATCGGATTATGGGGAAGGGCGGGTATGAAATCGAATTGGTGATTCAAAAGCAACTTGAAGAGAGTGATGTGAACAGAAACCATGGGCGATTGAGTCTTCCGGCGAAGAAGGTGAGAAGGGAATTCTTGAGAGAAGAAGAAAGAAAAGTGTTGGATGAAGAAAATGGGAATAAGAAGAAGAAGAAGAAGAAGAAGGGAATGGAAGTGGGAATTATGGATTCTCTTCTCCAAGAAAGCTCAATTTGGTTGAAGAAATGGAAGATTGGGAGTGGTAAGGTTTATTGTTTGATGAACAATTGA

Protein sequence

MGMGMIQPGLPLGFNGIHIPRRKRSCFVQSKPEDDDDGASISMMEVANIMIAMANGGFCKRKRKKPSTVKQRKKSREKEMELGKSPPEMPAAMRDRIMGKGGYEIELVIQKQLEESDVNRNHGRLSLPAKKVRREFLREEERKVLDEENGNKKKKKKKKGMEVGIMDSLLQESSIWLKKWKIGSGKVYCLMNN

Homology

[Close]

BLAST of Lsi08G013500 vs. ExPASy Swiss-Prot
Match: Q9XIP5 (Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana OX=3702 GN=At2g27410 PE=3 SV=2)

HSP 1 Score: 45.4 bits (106), Expect = 8.2e-04
Identity = 38/136 (27.94%), Postives = 70/136 (51.47%), Query Frame = 0


Query: 60  KRKRKKPSTVKQRKKSREK------EMELGKSPPEMPAAMRDRIMGKGGYEIELVIQKQL 119
           + K K+P  V++R   + K      E  +  +PPE    +  R   + GY  +L+  +QL
Sbjct: 37  RSKEKRPINVEKRSHKKRKIICPLEEEPIQTTPPEWLLNVMRR--EENGYNPKLISTRQL 96

Query: 120 EESDVNRNHGRLSLPAKKVRR-EFLREEERKVLDEENGNKKKKKKKKGMEVGIMDSLLQE 179
            ++D+ +   RLS+P K+V+  +FL E+E +++ E       K +  G+ V  +D  L +
Sbjct: 97  YKTDLKKTEARLSVPFKQVKTPDFLTEDETRIIHE----NAMKIRDNGVPVNFVDPELNK 156

Query: 180 SSIWLKKWKIGSGKVY 189
             + L+KWK+    +Y
Sbjct: 157 HVLELRKWKMKGNWIY 166

[Close]

BLAST of Lsi08G013500 vs. ExPASy TrEMBL
Match: A0A0A0LRL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G365090 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 9.3e-59
Identity = 135/209 (64.59%), Postives = 158/209 (75.60%), Query Frame = 0


Query: 1   MGMGMIQP--GLPLGFNGIHIPRRKRSCFVQSKPEDDDDGASISMMEVANIMIAMANGGF 60
           MG  MIQ    L L   G+H+PRRKRS  V+SK E  DDGASISM+E A I+IAMAN GF
Sbjct: 3   MGNVMIQEPHSLVLIDGGVHVPRRKRSGSVESKKE--DDGASISMVEAAKILIAMANDGF 62

Query: 61  CKRKRKKPSTVKQRKKS--------------REKEMELGKSPPEMPAAMRDRIMGKGGYE 120
           CKRK+K+  TVKQ KKS              ++K MEL +S PEMPA+MRDR++GKGGYE
Sbjct: 63  CKRKKKESPTVKQSKKSPTAKKRKTSPTAKQKKKSMELEESFPEMPASMRDRVVGKGGYE 122

Query: 121 IELVIQKQLEESDVNRNHGRLSLPAKKVRREFLREEERKVLDEENGNKKKKKKKKGMEVG 180
           I+LVIQKQLEESDV+RNHGRL LPAKKV+ EF+REEER +L+EEN    KKK KKG+EVG
Sbjct: 123 IQLVIQKQLEESDVSRNHGRLCLPAKKVKTEFVREEERNILEEENDG--KKKNKKGLEVG 182

Query: 181 IMDSLLQESSIWLKKWKIGSGKVYCLMNN 194
           +MD  L+ESS+ LKKWKIGSGK YCLM N
Sbjct: 183 VMDDSLRESSMCLKKWKIGSGKFYCLMKN 207

[Close]

BLAST of Lsi08G013500 vs. ExPASy TrEMBL
Match: A0A5A7VC33 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005250 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.1e-56
Identity = 127/192 (66.15%), Postives = 149/192 (77.60%), Query Frame = 0


Query: 16  GIHIPRRKRSCFVQSKPEDDDDGASISMMEVANIMIAMANGGFCKRKRKKPSTVKQRKKS 75
           G+HIPRRK+S  V+SK E  D+GASISM+E A I++AMANGGFC+RKRKK  TVKQ KKS
Sbjct: 22  GVHIPRRKKSGSVESKKE--DEGASISMVEAAKILLAMANGGFCERKRKKSPTVKQSKKS 81

Query: 76  --------------REKEMELGKSPPEMPAAMRDRIMGKGGYEIELVIQKQLEESDVNRN 135
                         R+K MEL +S PEMPA+MRDRI+G GGYEI+LVIQKQLEESDV+RN
Sbjct: 82  PTAKQRKKSPSEKQRKKSMELEESFPEMPASMRDRIVGNGGYEIQLVIQKQLEESDVSRN 141

Query: 136 HGRLSLPAKKVRREFLREEERKVLDEENGNKKKKKKKKGMEVGIMDSLLQESSIWLKKWK 194
           HGRL LPA KV+ EF+REEER +L+EEN    KKK KKG+EVG+M   L+ESS+ LKKWK
Sbjct: 142 HGRLCLPATKVKTEFVREEERNILEEENNG--KKKNKKGLEVGVMGDDLRESSMCLKKWK 201

[Close]

BLAST of Lsi08G013500 vs. ExPASy TrEMBL
Match: A0A1S3BD17 (putative B3 domain-containing protein At3g49610 OS=Cucumis melo OX=3656 GN=LOC103488551 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.1e-56
Identity = 127/192 (66.15%), Postives = 149/192 (77.60%), Query Frame = 0


Query: 16  GIHIPRRKRSCFVQSKPEDDDDGASISMMEVANIMIAMANGGFCKRKRKKPSTVKQRKKS 75
           G+HIPRRK+S  V+SK E  D+GASISM+E A I++AMANGGFC+RKRKK  TVKQ KKS
Sbjct: 18  GVHIPRRKKSGSVESKKE--DEGASISMVEAAKILLAMANGGFCERKRKKSPTVKQSKKS 77

Query: 76  --------------REKEMELGKSPPEMPAAMRDRIMGKGGYEIELVIQKQLEESDVNRN 135
                         R+K MEL +S PEMPA+MRDRI+G GGYEI+LVIQKQLEESDV+RN
Sbjct: 78  PTAKQRKKSPSEKQRKKSMELEESFPEMPASMRDRIVGNGGYEIQLVIQKQLEESDVSRN 137

Query: 136 HGRLSLPAKKVRREFLREEERKVLDEENGNKKKKKKKKGMEVGIMDSLLQESSIWLKKWK 194
           HGRL LPA KV+ EF+REEER +L+EEN    KKK KKG+EVG+M   L+ESS+ LKKWK
Sbjct: 138 HGRLCLPATKVKTEFVREEERNILEEENNG--KKKNKKGLEVGVMGDDLRESSMCLKKWK 197

[Close]

BLAST of Lsi08G013500 vs. ExPASy TrEMBL
Match: A0A5A7VFT2 (B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005230 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 7.2e-43
Identity = 106/182 (58.24%), Postives = 134/182 (73.63%), Query Frame = 0


Query: 15  NGIHIPRRKRSCFVQSKPEDDDDGASISMMEVANIMIAMANGGFCKRKRKKPSTVKQRKK 74
           NGI IP+RKRS    ++P+ +++  S S++EVA  MI MANG    R+RKKP        
Sbjct: 7   NGIQIPQRKRS--GSAEPKQEENRVSSSLLEVAEAMIEMANGD--NRERKKP-------- 66

Query: 75  SREKEMELGKSPPEMPAAMRDRIMGKGGYEIELVIQKQLEESDVNRNHGRLSLPAKKVRR 134
            R +EME G+S  EMPAAMR+ I+  GGYEI+LVI+K+LEESDV+RNHGRL LP  K++ 
Sbjct: 67  -RREEMESGQSSSEMPAAMREWIVRNGGYEIQLVIEKKLEESDVSRNHGRLCLPTMKLKG 126

Query: 135 EFLREEERKVLDEENGNKKKK---KKKKGMEVGIMDSLLQESSIWLKKWKIGSGKVYCLM 194
           EF RE+ER++LDEENG KKKK   KKK G+EVGIMD  L+ESS+ LKKWKIGS + YCL+
Sbjct: 127 EFAREDERRILDEENGGKKKKMMMKKKNGLEVGIMDVDLRESSMSLKKWKIGSDRCYCLV 175

[Close]

BLAST of Lsi08G013500 vs. ExPASy TrEMBL
Match: A0A1S4DVE5 (B3 domain-containing protein At1g05920-like OS=Cucumis melo OX=3656 GN=LOC107990711 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 7.2e-43
Identity = 106/182 (58.24%), Postives = 134/182 (73.63%), Query Frame = 0


Query: 15  NGIHIPRRKRSCFVQSKPEDDDDGASISMMEVANIMIAMANGGFCKRKRKKPSTVKQRKK 74
           NGI IP+RKRS    ++P+ +++  S S++EVA  MI MANG    R+RKKP        
Sbjct: 7   NGIQIPQRKRS--GSAEPKQEENRVSSSLLEVAEAMIEMANGD--NRERKKP-------- 66

Query: 75  SREKEMELGKSPPEMPAAMRDRIMGKGGYEIELVIQKQLEESDVNRNHGRLSLPAKKVRR 134
            R +EME G+S  EMPAAMR+ I+  GGYEI+LVI+K+LEESDV+RNHGRL LP  K++ 
Sbjct: 67  -RREEMESGQSSSEMPAAMREWIVRNGGYEIQLVIEKKLEESDVSRNHGRLCLPTMKLKG 126

Query: 135 EFLREEERKVLDEENGNKKKK---KKKKGMEVGIMDSLLQESSIWLKKWKIGSGKVYCLM 194
           EF RE+ER++LDEENG KKKK   KKK G+EVGIMD  L+ESS+ LKKWKIGS + YCL+
Sbjct: 127 EFAREDERRILDEENGGKKKKMMMKKKNGLEVGIMDVDLRESSMSLKKWKIGSDRCYCLV 175

[Close]

BLAST of Lsi08G013500 vs. NCBI nr
Match: XP_038884919.1 (B3 domain-containing protein At1g05920-like [Benincasa hispida])

HSP 1 Score: 270.4 bits (690), Expect = 1.2e-68
Identity = 155/212 (73.11%), Postives = 170/212 (80.19%), Query Frame = 0


Query: 3   MGMIQPGLPLG-FNGIHIPRRKRSCFVQSKPEDDDDGASISMMEVANIMIAM--ANGGFC 62
           MGMI+ GL LG  NG++IPRRKRS  V+SKP  DDDGASISMMEVA IMIAM  ANGG+ 
Sbjct: 1   MGMIEEGLRLGEINGVNIPRRKRSSSVESKP--DDDGASISMMEVATIMIAMANANGGYY 60

Query: 63  KRKRKKPSTVKQRK------------------KSREKEMELGKSPPEMPAAMRDRIMGKG 122
           KRKRKK ST KQRK                  KSR KEMELGKSPPEMPAAMRDRI+G G
Sbjct: 61  KRKRKKSSTSKQRKKSSTPKQRKKSPTKKQRRKSRGKEMELGKSPPEMPAAMRDRIVGNG 120

Query: 123 GYEIELVIQKQLEESDVNRNHGRLSLPAKKVRREFLREEERKVLDEENGNKKKKKKKKGM 182
           G EIELVIQK+LEESDVNRN+GRLSLPAKKVRREF+REEE+K+LDEE G  K +KKKKGM
Sbjct: 121 GIEIELVIQKKLEESDVNRNNGRLSLPAKKVRREFVREEEKKILDEEKG--KNEKKKKGM 180

Query: 183 EVGIMDSLLQESSIWLKKWKIGSGKVYCLMNN 194
           EVGI+D  L+ESS+WLKKWKIGSGK YCLMNN
Sbjct: 181 EVGIVDDFLRESSMWLKKWKIGSGKDYCLMNN 208

[Close]

BLAST of Lsi08G013500 vs. NCBI nr
Match: XP_031737294.1 (putative B3 domain-containing protein At3g49610 [Cucumis sativus] >KAE8652119.1 hypothetical protein Csa_022154 [Cucumis sativus])

HSP 1 Score: 236.5 bits (602), Expect = 1.9e-58
Identity = 135/209 (64.59%), Postives = 158/209 (75.60%), Query Frame = 0


Query: 1   MGMGMIQP--GLPLGFNGIHIPRRKRSCFVQSKPEDDDDGASISMMEVANIMIAMANGGF 60
           MG  MIQ    L L   G+H+PRRKRS  V+SK E  DDGASISM+E A I+IAMAN GF
Sbjct: 5   MGNVMIQEPHSLVLIDGGVHVPRRKRSGSVESKKE--DDGASISMVEAAKILIAMANDGF 64

Query: 61  CKRKRKKPSTVKQRKKS--------------REKEMELGKSPPEMPAAMRDRIMGKGGYE 120
           CKRK+K+  TVKQ KKS              ++K MEL +S PEMPA+MRDR++GKGGYE
Sbjct: 65  CKRKKKESPTVKQSKKSPTAKKRKTSPTAKQKKKSMELEESFPEMPASMRDRVVGKGGYE 124

Query: 121 IELVIQKQLEESDVNRNHGRLSLPAKKVRREFLREEERKVLDEENGNKKKKKKKKGMEVG 180
           I+LVIQKQLEESDV+RNHGRL LPAKKV+ EF+REEER +L+EEN    KKK KKG+EVG
Sbjct: 125 IQLVIQKQLEESDVSRNHGRLCLPAKKVKTEFVREEERNILEEENDG--KKKNKKGLEVG 184

Query: 181 IMDSLLQESSIWLKKWKIGSGKVYCLMNN 194
           +MD  L+ESS+ LKKWKIGSGK YCLM N
Sbjct: 185 VMDDSLRESSMCLKKWKIGSGKFYCLMKN 209

[Close]

BLAST of Lsi08G013500 vs. NCBI nr
Match: XP_008445569.1 (PREDICTED: putative B3 domain-containing protein At3g49610 [Cucumis melo])

HSP 1 Score: 229.6 bits (584), Expect = 2.4e-56
Identity = 127/192 (66.15%), Postives = 149/192 (77.60%), Query Frame = 0


Query: 16  GIHIPRRKRSCFVQSKPEDDDDGASISMMEVANIMIAMANGGFCKRKRKKPSTVKQRKKS 75
           G+HIPRRK+S  V+SK E  D+GASISM+E A I++AMANGGFC+RKRKK  TVKQ KKS
Sbjct: 18  GVHIPRRKKSGSVESKKE--DEGASISMVEAAKILLAMANGGFCERKRKKSPTVKQSKKS 77

Query: 76  --------------REKEMELGKSPPEMPAAMRDRIMGKGGYEIELVIQKQLEESDVNRN 135
                         R+K MEL +S PEMPA+MRDRI+G GGYEI+LVIQKQLEESDV+RN
Sbjct: 78  PTAKQRKKSPSEKQRKKSMELEESFPEMPASMRDRIVGNGGYEIQLVIQKQLEESDVSRN 137

Query: 136 HGRLSLPAKKVRREFLREEERKVLDEENGNKKKKKKKKGMEVGIMDSLLQESSIWLKKWK 194
           HGRL LPA KV+ EF+REEER +L+EEN    KKK KKG+EVG+M   L+ESS+ LKKWK
Sbjct: 138 HGRLCLPATKVKTEFVREEERNILEEENNG--KKKNKKGLEVGVMGDDLRESSMCLKKWK 197

[Close]

BLAST of Lsi08G013500 vs. NCBI nr
Match: KAA0065188.1 (putative B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 229.6 bits (584), Expect = 2.4e-56
Identity = 127/192 (66.15%), Postives = 149/192 (77.60%), Query Frame = 0


Query: 16  GIHIPRRKRSCFVQSKPEDDDDGASISMMEVANIMIAMANGGFCKRKRKKPSTVKQRKKS 75
           G+HIPRRK+S  V+SK E  D+GASISM+E A I++AMANGGFC+RKRKK  TVKQ KKS
Sbjct: 22  GVHIPRRKKSGSVESKKE--DEGASISMVEAAKILLAMANGGFCERKRKKSPTVKQSKKS 81

Query: 76  --------------REKEMELGKSPPEMPAAMRDRIMGKGGYEIELVIQKQLEESDVNRN 135
                         R+K MEL +S PEMPA+MRDRI+G GGYEI+LVIQKQLEESDV+RN
Sbjct: 82  PTAKQRKKSPSEKQRKKSMELEESFPEMPASMRDRIVGNGGYEIQLVIQKQLEESDVSRN 141

Query: 136 HGRLSLPAKKVRREFLREEERKVLDEENGNKKKKKKKKGMEVGIMDSLLQESSIWLKKWK 194
           HGRL LPA KV+ EF+REEER +L+EEN    KKK KKG+EVG+M   L+ESS+ LKKWK
Sbjct: 142 HGRLCLPATKVKTEFVREEERNILEEENNG--KKKNKKGLEVGVMGDDLRESSMCLKKWK 201

[Close]

BLAST of Lsi08G013500 vs. NCBI nr
Match: XP_016899957.1 (PREDICTED: B3 domain-containing protein At1g05920-like [Cucumis melo] >KAA0065186.1 B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 183.7 bits (465), Expect = 1.5e-42
Identity = 106/182 (58.24%), Postives = 134/182 (73.63%), Query Frame = 0


Query: 15  NGIHIPRRKRSCFVQSKPEDDDDGASISMMEVANIMIAMANGGFCKRKRKKPSTVKQRKK 74
           NGI IP+RKRS    ++P+ +++  S S++EVA  MI MANG    R+RKKP        
Sbjct: 7   NGIQIPQRKRS--GSAEPKQEENRVSSSLLEVAEAMIEMANGD--NRERKKP-------- 66

Query: 75  SREKEMELGKSPPEMPAAMRDRIMGKGGYEIELVIQKQLEESDVNRNHGRLSLPAKKVRR 134
            R +EME G+S  EMPAAMR+ I+  GGYEI+LVI+K+LEESDV+RNHGRL LP  K++ 
Sbjct: 67  -RREEMESGQSSSEMPAAMREWIVRNGGYEIQLVIEKKLEESDVSRNHGRLCLPTMKLKG 126

Query: 135 EFLREEERKVLDEENGNKKKK---KKKKGMEVGIMDSLLQESSIWLKKWKIGSGKVYCLM 194
           EF RE+ER++LDEENG KKKK   KKK G+EVGIMD  L+ESS+ LKKWKIGS + YCL+
Sbjct: 127 EFAREDERRILDEENGGKKKKMMMKKKNGLEVGIMDVDLRESSMSLKKWKIGSDRCYCLV 175

[Close]

BLAST of Lsi08G013500 vs. TAIR 10
Match: AT2G27410.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 45.4 bits (106), Expect = 5.9e-05
Identity = 38/136 (27.94%), Postives = 70/136 (51.47%), Query Frame = 0


Query: 60  KRKRKKPSTVKQRKKSREK------EMELGKSPPEMPAAMRDRIMGKGGYEIELVIQKQL 119
           + K K+P  V++R   + K      E  +  +PPE    +  R   + GY  +L+  +QL
Sbjct: 37  RSKEKRPINVEKRSHKKRKIICPLEEEPIQTTPPEWLLNVMRR--EENGYNPKLISTRQL 96

Query: 120 EESDVNRNHGRLSLPAKKVRR-EFLREEERKVLDEENGNKKKKKKKKGMEVGIMDSLLQE 179
            ++D+ +   RLS+P K+V+  +FL E+E +++ E       K +  G+ V  +D  L +
Sbjct: 97  YKTDLKKTEARLSVPFKQVKTPDFLTEDETRIIHE----NAMKIRDNGVPVNFVDPELNK 156

Query: 180 SSIWLKKWKIGSGKVY 189
             + L+KWK+    +Y
Sbjct: 157 HVLELRKWKMKGNWIY 166

The following BLAST results are available for this feature:

BLAST of Lsi08G013500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIP5	8.2e-04	27.94	Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lsi08G013500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRL4	9.3e-59	64.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G365090 PE=4 SV=1	[more]
A0A5A7VC33	1.1e-56	66.15	Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BD17	1.1e-56	66.15	putative B3 domain-containing protein At3g49610 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7VFT2	7.2e-43	58.24	B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A1S4DVE5	7.2e-43	58.24	B3 domain-containing protein At1g05920-like OS=Cucumis melo OX=3656 GN=LOC107990...	[more]

BLAST of Lsi08G013500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884919.1	1.2e-68	73.11	B3 domain-containing protein At1g05920-like [Benincasa hispida]	[more]
XP_031737294.1	1.9e-58	64.59	putative B3 domain-containing protein At3g49610 [Cucumis sativus] >KAE8652119.1 ...	[more]
XP_008445569.1	2.4e-56	66.15	PREDICTED: putative B3 domain-containing protein At3g49610 [Cucumis melo]	[more]
KAA0065188.1	2.4e-56	66.15	putative B3 domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_016899957.1	1.5e-42	58.24	PREDICTED: B3 domain-containing protein At1g05920-like [Cucumis melo] >KAA006518...	[more]

BLAST of Lsi08G013500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27410.1	5.9e-05	27.94	Domain of unknown function (DUF313)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 137..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..92
None	No IPR available	PANTHER	PTHR31541:SF25	DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED	coord: 42..192
IPR005508	B3 domain-containing protein At2g31720-like	PFAM	PF03754	DUF313	coord: 100..191 e-value: 7.1E-16 score: 58.4
IPR005508	B3 domain-containing protein At2g31720-like	PANTHER	PTHR31541	B3 DOMAIN PLANT PROTEIN-RELATED	coord: 42..192
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 99..193 e-value: 2.6E-9 score: 38.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G013500.1	Lsi08G013500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding