Lsi08G013260 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G013260
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	WEB family protein At1g75720-like
Location	chr08: 21569543 .. 21571903 (+)
RNA-Seq Expression	Lsi08G013260
Synteny	Lsi08G013260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGTTATTATTCTTTAATTTTATAAGGTTATAAAAGAAAATATTGTTAGTTTCAGTTTCTTTGACAGTTCTATCACCATATATCTGAAAACTTCAGTTGAATTAAAGCTTATTTGGAGTGGATGAAGATGGAGAAAAGACAGTTTCGATCGGTGAAAGAAGCCGTTGAGTTGTACGGCCAAAGAATTTTAGCTCCGGAGCTCTACGCCAACGTTATTCAAGAGGTATTAAAGGGTCGGTTTGGAATGACTTTTTAAATACTTGCATTTCATTTAGATCTTCGTTGATTCTTCTTTTATTATAGTGTTGATATTAAATTTAACATAACTTATCAACTTAAATTTTTTGGTCAATCGGTAATTTAACATGGTATTAAAAAATGTTATATGTATTAAAGTGTTGATATAATTAAATTTATCATAACTAATTAACTTAAGTTTTTGAGTTAATTAATGATTCGACCTCTTAAATTATAATATTCTTACGGCCAAGTTTTTTATGTGAGGTAATTTTATTAGAATTACTTGTTTAGTAAATATGAGTAGCACTCTCAAATGTCACACATTTGCGAAACTTCCTTTAGCATAGTTTTTAATGTTATCCCTTACATAATTTGATAGGAGAAAATAATTTATCCAACCCTTTAAAACAATAAATATTTTCGTTAAAAACCCGATATATTATTCAATAGATTATAGTTTGTTTAGTTAGACTAAAGTGTGGGAGAAGATTTGAACCGTCGACTTTATATAAAGGAATAATATATGTGCCTCAACTATTATTAAATGTATTCACATTGACCAATAGATTTTACTATTTAGATAAAGAATTTTAAAGGTTCATTTGCAGTTTAGTCTATTAACTTTTAAATTTGTGTCTATCTGGTCCATGAACTTTGAAAGTGAATAATACGTCCTTGAAACTTCAAGTTTTGTATCCAATAAACCCACATAATTAAAAAACATCTAATAGGGCGCCTTTGAACTTTCAATTGTGTGTTCAATAGAGCTCTAAATCTAGTGAAAGTATAGGATTAGAGATCAATTCTAAATCTACTAGATTAGATGACTTTAATTTTTTTTAATAGGACAAACACCTATTAAGACAAAAATGTGAAAATGCATGACTTTTGAATGCAAACACGAAAATTAATGGACTAAACTTTGTAATTAACTCTTAAGAAATATCGATAAAATATAGATTTGTTTTTATAAAAAAATGCTTATTTAAATAATTTGAAATAATGATTGTGTTTCATAATTTTTTATTTTTTATTTTTTATGTTTATTCCATAAGCATTTTATTTGACACATTTTTTTTTCCATATTGACATCTCCCTAAAATCAATACTTTTTTTAAAAGAAAAAACAACGGTAGGATATAAAGATTTAAACCTTCAAACTTCTATAGAACAAATACAAACAATTACTGCTTGGTTGTTATATTCATTTTTAACTTTGGTAATTAAATATAATATTGATTTATGTATATTAATTAAACGTGTATAGATGGAGAATGAAGAGAATGAACACGAGAATAACCTTCTAAAGATCAAAAGCGTAAGAGATGAATTGGACATTGCAAAACAAAACTTGGAGAAAGCTAAAGAAAGGAGTGTAGCTATGGCACGATCATTTTCTTCTTTGCAAGAAGAGCTAGAAGAGACAAAGAGAAAGCTCCAAGTGCTGAAGGAAAAATCAGATTATGAAATTGAATTTGTTGGTGATTCTTTGAAATTTGACTTCAAAACACAATCACAAAGATTTGAAGTAGAAGAAGAAAAGGAAGAAAGTGAAGTCTTTAAAAAAAGGCATGAAAAAATGAATGGTGAAGAAATTAAGGATATTCCATCTATGAAGAAGAAGGCAAGCAAGAAGAAGAAAGCAATACTTTTTATAGGAGAATTTTTTTCCAAGAAGAAGTGAAAAAAATATATAATATATTTAATAAAATTAAACATTGCTTTTAAATATAGAAAAATGCGTTAAACTATTTATAAATATAGAAAATTTTTACTGTCTATCGGCGATAGGCTGCAATAGATTTCTATCGCTGGATCTATCTCAGTCTATTAATAGATCGTCAAATTTTTTTTATATTTATAAATAGTTTGATATTTTCCCAGTTTAGAGTAATTTTCTTAAAGTTAAATATTACAAAAACCGTCTTTAGTTTAAAAAATATGTTTTTTTTATTTGATTTTGTGAATGGAATTTTATTTTGGAGCCATGAAAATGGTTTAAAATATACTGTTAATCATTGTATTTTGACTGATATAATTTGTTTGATTCTCCTTACTTGTATTGGTAATGATTATGTCCTTTGAGTTAAATTTGTTTATTAAATACTTGATTGCCTGTCC

mRNA sequence

GGGTTATTATTCTTTAATTTTATAAGGTTATAAAAGAAAATATTGTTAGTTTCAGTTTCTTTGACAGTTCTATCACCATATATCTGAAAACTTCAGTTGAATTAAAGCTTATTTGGAGTGGATGAAGATGGAGAAAAGACAGTTTCGATCGGTGAAAGAAGCCGTTGAGTTGTACGGCCAAAGAATTTTAGCTCCGGAGCTCTACGCCAACGTTATTCAAGAGATGGAGAATGAAGAGAATGAACACGAGAATAACCTTCTAAAGATCAAAAGCGTAAGAGATGAATTGGACATTGCAAAACAAAACTTGGAGAAAGCTAAAGAAAGGAGTGTAGCTATGGCACGATCATTTTCTTCTTTGCAAGAAGAGCTAGAAGAGACAAAGAGAAAGCTCCAAGTGCTGAAGGAAAAATCAGATTATGAAATTGAATTTGTTGGTGATTCTTTGAAATTTGACTTCAAAACACAATCACAAAGATTTGAAGTAGAAGAAGAAAAGGAAGAAAGTGAAGTCTTTAAAAAAAGGCATGAAAAAATGAATGGTGAAGAAATTAAGGATATTCCATCTATGAAGAAGAAGGCAAGCAAGAAGAAGAAAGCAATACTTTTTATAGGAGAATTTTTTTCCAAGAAGAAGTGAAAAAAATATATAATATATTTAATAAAATTAAACATTGCTTTTAAATATAGAAAAATGCGTTAAACTATTTATAAATATAGAAAATTTTTACTGTCTATCGGCGATAGGCTGCAATAGATTTCTATCGCTGGATCTATCTCAGTCTATTAATAGATCGTCAAATTTTTTTTATATTTATAAATAGTTTGATATTTTCCCAGTTTAGAGTAATTTTCTTAAAGTTAAATATTACAAAAACCGTCTTTAGTTTAAAAAATATGTTTTTTTTATTTGATTTTGTGAATGGAATTTTATTTTGGAGCCATGAAAATGGTTTAAAATATACTGTTAATCATTGTATTTTGACTGATATAATTTGTTTGATTCTCCTTACTTGTATTGGTAATGATTATGTCCTTTGAGTTAAATTTGTTTATTAAATACTTGATTGCCTGTCC

Coding sequence (CDS)

ATGAAGATGGAGAAAAGACAGTTTCGATCGGTGAAAGAAGCCGTTGAGTTGTACGGCCAAAGAATTTTAGCTCCGGAGCTCTACGCCAACGTTATTCAAGAGATGGAGAATGAAGAGAATGAACACGAGAATAACCTTCTAAAGATCAAAAGCGTAAGAGATGAATTGGACATTGCAAAACAAAACTTGGAGAAAGCTAAAGAAAGGAGTGTAGCTATGGCACGATCATTTTCTTCTTTGCAAGAAGAGCTAGAAGAGACAAAGAGAAAGCTCCAAGTGCTGAAGGAAAAATCAGATTATGAAATTGAATTTGTTGGTGATTCTTTGAAATTTGACTTCAAAACACAATCACAAAGATTTGAAGTAGAAGAAGAAAAGGAAGAAAGTGAAGTCTTTAAAAAAAGGCATGAAAAAATGAATGGTGAAGAAATTAAGGATATTCCATCTATGAAGAAGAAGGCAAGCAAGAAGAAGAAAGCAATACTTTTTATAGGAGAATTTTTTTCCAAGAAGAAGTGA

Protein sequence

MKMEKRQFRSVKEAVELYGQRILAPELYANVIQEMENEENEHENNLLKIKSVRDELDIAKQNLEKAKERSVAMARSFSSLQEELEETKRKLQVLKEKSDYEIEFVGDSLKFDFKTQSQRFEVEEEKEESEVFKKRHEKMNGEEIKDIPSMKKKASKKKKAILFIGEFFSKKK

Homology

[Close]

BLAST of Lsi08G013260 vs. ExPASy Swiss-Prot
Match: F4I0N3 (WEB family protein At1g75720 OS=Arabidopsis thaliana OX=3702 GN=At1g75720 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.0e-09
Identity = 67/187 (35.83%), Postives = 103/187 (55.08%), Query Frame = 0


Query: 8   FRSVKEAVELYGQRILAPELYANVIQEMENEENEHENNLLKIKSVRDELDIAKQNLEKAK 67
           FR+VKEAV L+G+R+LA ++Y+N ++ M +E+ E  +       ++ EL   + +L++AK
Sbjct: 16  FRTVKEAVALFGERVLASQVYSNHLKVMHDEKWEDPS------GIKIELQETRYDLKRAK 75

Query: 68  ERSVAMARSFSSLQEELEETKRKLQVLKEKSDYEIEFVGDSLKFDFKTQSQRFEVEEEKE 127
           E S+ M  S S L+EELE TK++LQ L+      ++   +  K D      +FEV   + 
Sbjct: 76  EESIQMRNSLSCLKEELERTKQELQKLR------VDPGVNETKLDETVFKTKFEVLVPRV 135

Query: 128 ESE---------VFKKRHEKM------NGEE-IKDIPSMKKK----ASKKKKAI--LFIG 173
           + E         + +KR+ K       NG   ++  PSMKKK      KKKK++  LFIG
Sbjct: 136 DDEPIRSPRLRSMSEKRYVKFANPTGNNGSVFLERHPSMKKKEKKTKDKKKKSLIPLFIG 190

[Close]

BLAST of Lsi08G013260 vs. ExPASy TrEMBL
Match: A0A0A0LLM0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368250 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.1e-66
Identity = 157/175 (89.71%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 1   MKMEKRQFRSVKEAVELYGQRILAPELYANVIQEMENEENEHENNLLKIKSVRDELDIAK 60
           MKMEKRQFRSVKEAVELYGQRILAPELYANV+QEMENEENEHENNLLKIK VRDELDIAK
Sbjct: 1   MKMEKRQFRSVKEAVELYGQRILAPELYANVLQEMENEENEHENNLLKIKMVRDELDIAK 60

Query: 61  QNLEKAKERSVAMARSFSSLQEELEETKRKLQVLKEKSDYEIEFVGDSLKFDFKTQSQRF 120
           QNLEKAKERSVAMARSFSSLQEELEETKRKLQ+LKEKSDY+IEFVG SLKFD KTQSQRF
Sbjct: 61  QNLEKAKERSVAMARSFSSLQEELEETKRKLQMLKEKSDYDIEFVGHSLKFDSKTQSQRF 120

Query: 121 EV-EEEKEESEVFKKRHE-KMNGEEIKDIPSM-KKKASKKKKAILFIGEFFSKKK 173
           EV EEE+EESEVF+KR   KMNG+E  DI SM KKKASKKKKAILFIG FFSKKK
Sbjct: 121 EVEEEEEEESEVFEKRQVIKMNGKEFSDIQSMKKKKASKKKKAILFIGGFFSKKK 175

[Close]

BLAST of Lsi08G013260 vs. ExPASy TrEMBL
Match: A0A1S3BB69 (WEB family protein At1g75720-like OS=Cucumis melo OX=3656 GN=LOC103488040 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 3.1e-66
Identity = 154/177 (87.01%), Postives = 161/177 (90.96%), Query Frame = 0


Query: 1   MKMEKRQFRSVKEAVELYGQRILAPELYANVIQEMENEENEHENNLLKIKSVRDELDIAK 60
           MKMEKRQFRSVKEAVELYGQRILAPELYANV++EMENEENEHENNLLKIK VRDELDIAK
Sbjct: 1   MKMEKRQFRSVKEAVELYGQRILAPELYANVLREMENEENEHENNLLKIKIVRDELDIAK 60

Query: 61  QNLEKAKERSVAMARSFSSLQEELEETKRKLQVLKEKSDYEIEFVGDSLKFDFKTQSQRF 120
           QNLEKAKERSVAMARSFSSLQEELEETKRKLQ+LKEKSDY+IEFVG SLKFD KTQSQRF
Sbjct: 61  QNLEKAKERSVAMARSFSSLQEELEETKRKLQMLKEKSDYDIEFVGHSLKFDSKTQSQRF 120

Query: 121 EV----EEEKEESEVFKKRHEKMNGEEIKDI-PSMKKKASKKKKAILFIGEFFSKKK 173
           EV    EEE+EESEVF+KR  KMNG+E  DI P  KKKASKKKKAILFIG  FSKKK
Sbjct: 121 EVEEEEEEEEEESEVFEKRQAKMNGKEFSDIQPMKKKKASKKKKAILFIGGIFSKKK 177

[Close]

BLAST of Lsi08G013260 vs. ExPASy TrEMBL
Match: A0A6J1K3K7 (WEB family protein At1g75720-like OS=Cucurbita maxima OX=3661 GN=LOC111492056 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 3.0e-61
Identity = 144/176 (81.82%), Postives = 154/176 (87.50%), Query Frame = 0


Query: 1   MKMEKRQFRSVKEAVELYGQRILAPELYANVIQEMENEENEHENNLLKIKSVRDELDIAK 60
           MKMEKR +RSVKEAVELYGQRILAPELYANV+QEME+EENEHE  LL+IKSVRDEL+IAK
Sbjct: 1   MKMEKRSYRSVKEAVELYGQRILAPELYANVLQEMESEENEHEKKLLRIKSVRDELEIAK 60

Query: 61  QNLEKAKERSVAMARSFSSLQEELEETKRKLQVLKEKSDYEIEFVGDSLKFDFKTQSQRF 120
           QNLEKAKERS+AMARSFSSLQEELEETKRKLQ+LKEKSDY IEF GDSLKFDFKTQSQRF
Sbjct: 61  QNLEKAKERSIAMARSFSSLQEELEETKRKLQMLKEKSDYAIEFNGDSLKFDFKTQSQRF 120

Query: 121 EVEEEKEESEVFKKRHEKMNGEEIKDIPSMKKK----ASKKKKAILFIGEFFSKKK 173
              EE+EE E + KRH KMNGE  KD PS+K K    ASKKKKAILFI  FFSKKK
Sbjct: 121 ---EEQEEIEAYGKRHAKMNGEGFKDSPSLKNKKKNMASKKKKAILFIEGFFSKKK 173

[Close]

BLAST of Lsi08G013260 vs. ExPASy TrEMBL
Match: A0A6J1HHG9 (WEB family protein At1g75720-like OS=Cucurbita moschata OX=3662 GN=LOC111462966 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 5.7e-60
Identity = 142/176 (80.68%), Postives = 154/176 (87.50%), Query Frame = 0


Query: 1   MKMEKRQFRSVKEAVELYGQRILAPELYANVIQEMENEENEHENNLLKIKSVRDELDIAK 60
           MKMEKR +RSVKEAVELYGQRILAPELYANV+QE+E+EENEHE  LL+IKSVRDEL+IAK
Sbjct: 1   MKMEKRPYRSVKEAVELYGQRILAPELYANVLQEIESEENEHEKKLLRIKSVRDELEIAK 60

Query: 61  QNLEKAKERSVAMARSFSSLQEELEETKRKLQVLKEKSDYEIEFVGDSLKFDFKTQSQRF 120
           QNLEKAKERS+AMARSFSSLQEELEETKRKLQ+LKEKSDY IEF GDSLKFDFKTQSQRF
Sbjct: 61  QNLEKAKERSIAMARSFSSLQEELEETKRKLQMLKEKSDYAIEFNGDSLKFDFKTQSQRF 120

Query: 121 EVEEEKEESEVFKKRHEKMNGEEIKDIPSMKKK----ASKKKKAILFIGEFFSKKK 173
              EE+EE E + KRH KMNGE  K+ PS+K K    ASKKKKAILFI  FFSKKK
Sbjct: 121 ---EEQEEIEAYGKRHAKMNGEGFKNDPSLKNKKKNMASKKKKAILFIEGFFSKKK 173

[Close]

BLAST of Lsi08G013260 vs. ExPASy TrEMBL
Match: A0A6J1CRD7 (WEB family protein At1g75720-like OS=Momordica charantia OX=3673 GN=LOC111014055 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 6.6e-40
Identity = 115/173 (66.47%), Postives = 136/173 (78.61%), Query Frame = 0


Query: 3   MEKRQFRSVKEAVELYGQRILAPELYANVIQEMENEENEHENNLLKIKSVRDELDIAKQN 62
           MEKR +RSVKEAVELYG+RIL P+LYANV+ +ME+EENE EN+L+KIKSVRDELDIAKQN
Sbjct: 4   MEKRPYRSVKEAVELYGKRILEPDLYANVLHQMESEENEDENSLMKIKSVRDELDIAKQN 63

Query: 63  LEKAKERSVAMARSFSSLQEELEETKRKLQVLKEK-SDYEIEFVGDSLKFDFKTQSQRFE 122
           LEKAKERSV MARS SSLQEELE+TKRKLQ+LKE+ S    E V  S KFDFKTQSQRFE
Sbjct: 64  LEKAKERSVVMARSLSSLQEELEDTKRKLQMLKERESMRSFETVDGSWKFDFKTQSQRFE 123

Query: 123 VEEEKEESEVFKKRHEKMNGEEIKDIPSMKKKA--SKKKKAILFIGEFFSKKK 173
            EEE E +   +K+H  ++     + PS+KKK   + KK +IL  G FFSKK+
Sbjct: 124 EEEESEAN--CEKQHVNIDAH---NGPSVKKKVRDTMKKSSILMKG-FFSKKR 170

[Close]

BLAST of Lsi08G013260 vs. NCBI nr
Match: XP_038886273.1 (WEB family protein At1g75720-like [Benincasa hispida])

HSP 1 Score: 263.8 bits (673), Expect = 1.0e-66
Identity = 153/171 (89.47%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 3   MEKRQFRSVKEAVELYGQRILAPELYANVIQEMENEENEHENNLLKIKSVRDELDIAKQN 62
           MEKRQFRSVKEAVELYGQR+LAPELYANV++EMENEE EHENNL KIKSVRDEL+IAKQN
Sbjct: 1   MEKRQFRSVKEAVELYGQRLLAPELYANVLREMENEEIEHENNLQKIKSVRDELEIAKQN 60

Query: 63  LEKAKERSVAMARSFSSLQEELEETKRKLQVLKEKSDYEIEFVGDSLKFDFKTQSQRFEV 122
           LEKAKERSVAMARSFSSLQEELEETKRKLQ+LKEKSDY+IEFVGDSLKFDFKTQSQRFEV
Sbjct: 61  LEKAKERSVAMARSFSSLQEELEETKRKLQMLKEKSDYDIEFVGDSLKFDFKTQSQRFEV 120

Query: 123 EEEKEESEVFKKRHEKMNGEEIKDIPSMKKKAS-KKKKAILFIGEFFSKKK 173
           EE  EESEVF+K+H KMN  EIKDIPSMKKKAS KKKKA LFIG FFSKKK
Sbjct: 121 EE--EESEVFEKKHAKMNSGEIKDIPSMKKKASKKKKKATLFIGGFFSKKK 169

[Close]

BLAST of Lsi08G013260 vs. NCBI nr
Match: XP_004152652.1 (WEB family protein At1g75720 [Cucumis sativus] >KGN62673.1 hypothetical protein Csa_022627 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 2.2e-66
Identity = 157/175 (89.71%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 1   MKMEKRQFRSVKEAVELYGQRILAPELYANVIQEMENEENEHENNLLKIKSVRDELDIAK 60
           MKMEKRQFRSVKEAVELYGQRILAPELYANV+QEMENEENEHENNLLKIK VRDELDIAK
Sbjct: 1   MKMEKRQFRSVKEAVELYGQRILAPELYANVLQEMENEENEHENNLLKIKMVRDELDIAK 60

Query: 61  QNLEKAKERSVAMARSFSSLQEELEETKRKLQVLKEKSDYEIEFVGDSLKFDFKTQSQRF 120
           QNLEKAKERSVAMARSFSSLQEELEETKRKLQ+LKEKSDY+IEFVG SLKFD KTQSQRF
Sbjct: 61  QNLEKAKERSVAMARSFSSLQEELEETKRKLQMLKEKSDYDIEFVGHSLKFDSKTQSQRF 120

Query: 121 EV-EEEKEESEVFKKRHE-KMNGEEIKDIPSM-KKKASKKKKAILFIGEFFSKKK 173
           EV EEE+EESEVF+KR   KMNG+E  DI SM KKKASKKKKAILFIG FFSKKK
Sbjct: 121 EVEEEEEEESEVFEKRQVIKMNGKEFSDIQSMKKKKASKKKKAILFIGGFFSKKK 175

[Close]

BLAST of Lsi08G013260 vs. NCBI nr
Match: XP_008444801.1 (PREDICTED: WEB family protein At1g75720-like [Cucumis melo])

HSP 1 Score: 261.2 bits (666), Expect = 6.5e-66
Identity = 154/177 (87.01%), Postives = 161/177 (90.96%), Query Frame = 0


Query: 1   MKMEKRQFRSVKEAVELYGQRILAPELYANVIQEMENEENEHENNLLKIKSVRDELDIAK 60
           MKMEKRQFRSVKEAVELYGQRILAPELYANV++EMENEENEHENNLLKIK VRDELDIAK
Sbjct: 1   MKMEKRQFRSVKEAVELYGQRILAPELYANVLREMENEENEHENNLLKIKIVRDELDIAK 60

Query: 61  QNLEKAKERSVAMARSFSSLQEELEETKRKLQVLKEKSDYEIEFVGDSLKFDFKTQSQRF 120
           QNLEKAKERSVAMARSFSSLQEELEETKRKLQ+LKEKSDY+IEFVG SLKFD KTQSQRF
Sbjct: 61  QNLEKAKERSVAMARSFSSLQEELEETKRKLQMLKEKSDYDIEFVGHSLKFDSKTQSQRF 120

Query: 121 EV----EEEKEESEVFKKRHEKMNGEEIKDI-PSMKKKASKKKKAILFIGEFFSKKK 173
           EV    EEE+EESEVF+KR  KMNG+E  DI P  KKKASKKKKAILFIG  FSKKK
Sbjct: 121 EVEEEEEEEEEESEVFEKRQAKMNGKEFSDIQPMKKKKASKKKKAILFIGGIFSKKK 177

[Close]

BLAST of Lsi08G013260 vs. NCBI nr
Match: XP_022996992.1 (WEB family protein At1g75720-like [Cucurbita maxima])

HSP 1 Score: 244.6 bits (623), Expect = 6.3e-61
Identity = 144/176 (81.82%), Postives = 154/176 (87.50%), Query Frame = 0


Query: 1   MKMEKRQFRSVKEAVELYGQRILAPELYANVIQEMENEENEHENNLLKIKSVRDELDIAK 60
           MKMEKR +RSVKEAVELYGQRILAPELYANV+QEME+EENEHE  LL+IKSVRDEL+IAK
Sbjct: 1   MKMEKRSYRSVKEAVELYGQRILAPELYANVLQEMESEENEHEKKLLRIKSVRDELEIAK 60

Query: 61  QNLEKAKERSVAMARSFSSLQEELEETKRKLQVLKEKSDYEIEFVGDSLKFDFKTQSQRF 120
           QNLEKAKERS+AMARSFSSLQEELEETKRKLQ+LKEKSDY IEF GDSLKFDFKTQSQRF
Sbjct: 61  QNLEKAKERSIAMARSFSSLQEELEETKRKLQMLKEKSDYAIEFNGDSLKFDFKTQSQRF 120

Query: 121 EVEEEKEESEVFKKRHEKMNGEEIKDIPSMKKK----ASKKKKAILFIGEFFSKKK 173
              EE+EE E + KRH KMNGE  KD PS+K K    ASKKKKAILFI  FFSKKK
Sbjct: 121 ---EEQEEIEAYGKRHAKMNGEGFKDSPSLKNKKKNMASKKKKAILFIEGFFSKKK 173

[Close]

BLAST of Lsi08G013260 vs. NCBI nr
Match: XP_022962569.1 (WEB family protein At1g75720-like [Cucurbita moschata] >KAG7029434.1 WEB family protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 240.4 bits (612), Expect = 1.2e-59
Identity = 142/176 (80.68%), Postives = 154/176 (87.50%), Query Frame = 0


Query: 1   MKMEKRQFRSVKEAVELYGQRILAPELYANVIQEMENEENEHENNLLKIKSVRDELDIAK 60
           MKMEKR +RSVKEAVELYGQRILAPELYANV+QE+E+EENEHE  LL+IKSVRDEL+IAK
Sbjct: 1   MKMEKRPYRSVKEAVELYGQRILAPELYANVLQEIESEENEHEKKLLRIKSVRDELEIAK 60

Query: 61  QNLEKAKERSVAMARSFSSLQEELEETKRKLQVLKEKSDYEIEFVGDSLKFDFKTQSQRF 120
           QNLEKAKERS+AMARSFSSLQEELEETKRKLQ+LKEKSDY IEF GDSLKFDFKTQSQRF
Sbjct: 61  QNLEKAKERSIAMARSFSSLQEELEETKRKLQMLKEKSDYAIEFNGDSLKFDFKTQSQRF 120

Query: 121 EVEEEKEESEVFKKRHEKMNGEEIKDIPSMKKK----ASKKKKAILFIGEFFSKKK 173
              EE+EE E + KRH KMNGE  K+ PS+K K    ASKKKKAILFI  FFSKKK
Sbjct: 121 ---EEQEEIEAYGKRHAKMNGEGFKNDPSLKNKKKNMASKKKKAILFIEGFFSKKK 173

[Close]

BLAST of Lsi08G013260 vs. TAIR 10
Match: AT1G75720.2 (Plant protein of unknown function (DUF827) )

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-10
Identity = 67/187 (35.83%), Postives = 103/187 (55.08%), Query Frame = 0


Query: 8   FRSVKEAVELYGQRILAPELYANVIQEMENEENEHENNLLKIKSVRDELDIAKQNLEKAK 67
           FR+VKEAV L+G+R+LA ++Y+N ++ M +E+ E  +       ++ EL   + +L++AK
Sbjct: 16  FRTVKEAVALFGERVLASQVYSNHLKVMHDEKWEDPS------GIKIELQETRYDLKRAK 75

Query: 68  ERSVAMARSFSSLQEELEETKRKLQVLKEKSDYEIEFVGDSLKFDFKTQSQRFEVEEEKE 127
           E S+ M  S S L+EELE TK++LQ L+      ++   +  K D      +FEV   + 
Sbjct: 76  EESIQMRNSLSCLKEELERTKQELQKLR------VDPGVNETKLDETVFKTKFEVLVPRV 135

Query: 128 ESE---------VFKKRHEKM------NGEE-IKDIPSMKKK----ASKKKKAI--LFIG 173
           + E         + +KR+ K       NG   ++  PSMKKK      KKKK++  LFIG
Sbjct: 136 DDEPIRSPRLRSMSEKRYVKFANPTGNNGSVFLERHPSMKKKEKKTKDKKKKSLIPLFIG 190

[Close]

BLAST of Lsi08G013260 vs. TAIR 10
Match: AT1G75720.1 (Plant protein of unknown function (DUF827) )

HSP 1 Score: 59.7 bits (143), Expect = 2.7e-09
Identity = 65/187 (34.76%), Postives = 101/187 (54.01%), Query Frame = 0


Query: 8   FRSVKEAVELYGQRILAPELYANVIQEMENEENEHENNLLKIKSVRDELDIAKQNLEKAK 67
           FR+VKEAV L+G+R+LA ++Y+N + ++  +   H+        ++ EL   + +L++AK
Sbjct: 15  FRTVKEAVALFGERVLASQVYSNHL-KVAMKIQMHDEKWEDPSGIKIELQETRYDLKRAK 74

Query: 68  ERSVAMARSFSSLQEELEETKRKLQVLKEKSDYEIEFVGDSLKFDFKTQSQRFEVEEEKE 127
           E S+ M  S S L+EELE TK++LQ L+      ++   +  K D      +FEV   + 
Sbjct: 75  EESIQMRNSLSCLKEELERTKQELQKLR------VDPGVNETKLDETVFKTKFEVLVPRV 134

Query: 128 ESE---------VFKKRHEKM------NGEE-IKDIPSMKKK----ASKKKKAI--LFIG 173
           + E         + +KR+ K       NG   ++  PSMKKK      KKKK++  LFIG
Sbjct: 135 DDEPIRSPRLRSMSEKRYVKFANPTGNNGSVFLERHPSMKKKEKKTKDKKKKSLIPLFIG 194

[Close]

BLAST of Lsi08G013260 vs. TAIR 10
Match: AT2G17940.1 (Plant protein of unknown function (DUF827) )

HSP 1 Score: 44.7 bits (104), Expect = 8.9e-05
Identity = 41/134 (30.60%), Postives = 76/134 (56.72%), Query Frame = 0


Query: 5   KRQFRSVKEAVELYGQRILAPELYANVIQEMENEE-NEHENNLLKIKSVRDELDIAKQNL 64
           K  F SVKEAV ++G+++LA E+YA  ++E+  +E N   ++L ++ S+  EL+  KQ L
Sbjct: 17  KAAFGSVKEAVAMFGEKVLAGEIYATRLREIRTKETNSTPSSLSRLPSLTLELEQTKQTL 76

Query: 65  EKAKERSVAMARSFSSLQEELEETKRKLQVLKEKSDYEIEFVG-DSLKFDFKTQSQRF-E 124
            +  + + +++    +L +ELE  K+++Q L       ++    + LKF  + Q+    +
Sbjct: 77  TRTLQLNTSLSNRIKTLTQELELGKKEIQRLSRTRSSRLDNPEIEELKFVEQHQTMTSND 136

Query: 125 VEEEKEESEVFKKR 136
            EEE   +E  +KR
Sbjct: 137 FEEEVVTTEELEKR 150

[Close]

BLAST of Lsi08G013260 vs. TAIR 10
Match: AT3G51220.1 (Plant protein of unknown function (DUF827) )

HSP 1 Score: 43.9 bits (102), Expect = 1.5e-04
Identity = 58/185 (31.35%), Postives = 90/185 (48.65%), Query Frame = 0


Query: 8   FRSVKEAVELYGQRILAPELYANVIQEMENEENEHENNLLKIKSVRDELDIAKQNLEKAK 67
           FRSVKEAV L+G+RIL  + Y +   E  +            KS++DEL  AK+NL+KA+
Sbjct: 12  FRSVKEAVTLFGERILLGDNYISKSVERSS-----------CKSIQDELVEAKENLKKAE 71

Query: 68  ERSVAMARSFSSLQEELEETKRKLQVLKEKSDYEIEFVGDSLKF-DFKTQSQRFEVEEEK 127
           E +  +++   SL +ELE TK KL     ++  E   V D LKF +  T ++   + E K
Sbjct: 72  EENKVLSQLIESLTQELETTKEKLN-HSLRNFPEHPQVEDDLKFIEESTVNEPDNITEIK 131

Query: 128 ----EESEVFKKRHEKMN---------------GEEIKDIPSMKKKASKKKKAILFIGEF 173
               + +EV+  R EK                 G+E K+   +KK+  K K  +      
Sbjct: 132 MNRFDRNEVYGDRLEKRRSVKFANPPLLTKVIVGKEEKNQVMVKKQTKKMKPLVPLAAWL 184

The following BLAST results are available for this feature:

BLAST of Lsi08G013260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I0N3	2.0e-09	35.83	WEB family protein At1g75720 OS=Arabidopsis thaliana OX=3702 GN=At1g75720 PE=3 S...	[more]

BLAST of Lsi08G013260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLM0	1.1e-66	89.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368250 PE=4 SV=1	[more]
A0A1S3BB69	3.1e-66	87.01	WEB family protein At1g75720-like OS=Cucumis melo OX=3656 GN=LOC103488040 PE=4 S...	[more]
A0A6J1K3K7	3.0e-61	81.82	WEB family protein At1g75720-like OS=Cucurbita maxima OX=3661 GN=LOC111492056 PE...	[more]
A0A6J1HHG9	5.7e-60	80.68	WEB family protein At1g75720-like OS=Cucurbita moschata OX=3662 GN=LOC111462966 ...	[more]
A0A6J1CRD7	6.6e-40	66.47	WEB family protein At1g75720-like OS=Momordica charantia OX=3673 GN=LOC111014055...	[more]

BLAST of Lsi08G013260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886273.1	1.0e-66	89.47	WEB family protein At1g75720-like [Benincasa hispida]	[more]
XP_004152652.1	2.2e-66	89.71	WEB family protein At1g75720 [Cucumis sativus] >KGN62673.1 hypothetical protein ...	[more]
XP_008444801.1	6.5e-66	87.01	PREDICTED: WEB family protein At1g75720-like [Cucumis melo]	[more]
XP_022996992.1	6.3e-61	81.82	WEB family protein At1g75720-like [Cucurbita maxima]	[more]
XP_022962569.1	1.2e-59	80.68	WEB family protein At1g75720-like [Cucurbita moschata] >KAG7029434.1 WEB family ...	[more]

BLAST of Lsi08G013260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75720.2	1.4e-10	35.83	Plant protein of unknown function (DUF827)	[more]
AT1G75720.1	2.7e-09	34.76	Plant protein of unknown function (DUF827)	[more]
AT2G17940.1	8.9e-05	30.60	Plant protein of unknown function (DUF827)	[more]
AT3G51220.1	1.5e-04	31.35	Plant protein of unknown function (DUF827)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 28..69
None	No IPR available	COILS	Coil	Coil	coord: 122..142
None	No IPR available	COILS	Coil	Coil	coord: 77..97
None	No IPR available	PANTHER	PTHR32054	HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED	coord: 5..172
None	No IPR available	PANTHER	PTHR32054:SF9	OSJNBB0050O03.3 PROTEIN	coord: 5..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G013260.1	Lsi08G013260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009904	chloroplast accumulation movement
biological_process	GO:0009903	chloroplast avoidance movement
cellular_component	GO:0005829	cytosol