Lsi08G007580 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G007580
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Phytochrome
Location	chr08: 15922089 .. 15925733 (+)
RNA-Seq Expression	Lsi08G007580
Synteny	Lsi08G007580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTAATTACCTTTGACCTAGGGTTTATTTTGGAACATATTAGGGTTCATTGAACGCCTCCGACTTTTAGGGATGTAAGTAATTAATGTCTTGACCAATTGAGTTATGTTCCATCACTTTAGAAAAAAGAAAACTTTTATATAGATCAAGATACAAGTAAAGTACCGATACTTCGAGAAAAGATACTCCAGCTCACACACTCTAATCCTCACTCTTGGCTTCTTCACTCGCCAATATATGAGGGGGACGAAACCTTTCTAGATCATTTTATACTCTTCTTGAATATTAGGTAGAGTAATGTAGAGACTCCAAAAAGCTTTCGAGAATAGTTAGTGTTGTATTTTATTTTAACGTTGTTATGATCTACTTTGTCTCACTAGGTCAAGAGGAAAAAAACGTTCAATTCGAGATAAAAACACACAACTCCGACATCGAGTCGGGGTCCATAAGTCTAGTAGTAAATGCTTGTGCAAGCAAAGACTTAGGTGAAAATGTGGTGGGAGTGTGCTTTGTAGCACAAGACATAACATGTCAAAAGATGGTAATGGACAAGTTCACAAAACTACAAGGTGATTACAAAGCCATTGTACAAAACCCTAATCCACTAATCCCTCCAATATTTGGATTAGATGAATTTGGTTGGTGTTCAGAATGGAATTTAGCAATGACAAAGCTAAGTGGATGGTCTCGTGAAGCAGTTCTCAACAAAATGCTTTTAGGAGAAGTTTTTGGTACACAATTAAACTCTTCATCATGTTGTTGCCAACTCAAGAATCAAGAAGCTTTTGTGAATCTTGGGATTGTGTTGAACAATGCAATGAGTGGTCAAGATCCTGAAAAGAATATCTCATTTGGTTTCTATGCAAGAAATGGGATGTTTGTAGAATGTCTTCTATGTGTTAATAAGATATTGGATAGAGATGGTGGAATTATTGGAGTTTTTTGCTTCTTGCAACTTGCTAGTCAAGAGCTTCAACAAGCATTGAGTATTCAAAAATTATGTGAGAGAACAGCTTTGAATAGGTTGAAGGCATTGGGATATATGAAGAGGCAGATTCAAAATCCTCTTTGTGGGATCATTTTTTCAAGGAAAATGTTGCAGCAAACTCAGTTGGGAGTGGAACAGAAGCAACTTTTGCATAATAGTGTCAATTGTCAAAGGCAAATCTCCAAGGTTCTTGATGAATCTCATGATCTTGATCAGATTATCCAAGGGTATGTTCATTTTCAATATAAAAACAAAATTTTAATTATAATATTTGCCAAATGATTTTGCAAGGATTTAGTTCTTTACTATATGGTTGATTATAAGTTAATTTGTTTATATTACTCCGAAATAGAACAATGATTAGGTGCAGTCTAGTCCTATGCATTCCTCCTTTATACATAGTAAAAACAACATTCAATTTTTTTTCTTGCTATCATTCTCTCCTTCTTCTTATTTTTAAGGACAGTTGCAAATATAGCAATTAAATTCAAAGTATTAGCATATATAACAAAATTTTAAAAAAATTGCAAATATATCACAGTCTATCAGTGATAGACTTTTATGATCTAGGTTGTCTATCACTGATAGACCATAAGAGTCTATCAGCGATAGAAGTATATCACTGATAGACTTTGCTATATTTGTAATTTTTTTAAAATGTTACTATACACTTGGTTATTATCCCTAAAATTGCTACTCATTACAATTACCCTTATTTTTATTATCATTTCCTAAGTTGATTGAAAAGAGATACATATCCCAAAGCTAACCTCTCTTACATATTTGGAGACCTTTATTTCTTTACAATTAGTTGATCAATAGAATTTAATGTGGGAAAAAATATCTTCAAAATTTTATTTATTTGAATTTTATTTCTAATATAATACATTTGTTTAATTATTCTTCTTTTTCTTCCAACCCCATAACACATATGAAGATATTAAGGGCTGATTTATATTATGTATGCTATATGTATTGAATTTGCTAACATTTTTTGGGTTTTCTATTGGTTTTTGACAGTTTCATTGATTTAGAAATGGTTGAGTTTTCATTGTATGAAGTATTGGTGGTATCAATTAGTCAAGTTATGATGAAGAGCAAAGGGAAAGGTATTCAAATAGCAAATGAGATTGCAGAAGAGATCATGTCTGAGACCTTATATGGAGATAATTTGAGACTTCAACAAGTCATGGCTGATTTCTTGTTGATATCAGTTAATTATGCACCAACTGGAGGCCAACTCATGGTTTCAACAAATTTGACTAAGGATAAATTAGGAAACTCAGTGCATCTTGTGCATCTTGAATTCAGGTATACAATAACCTAAATTTAGTCTCTAACCCTAGTTTGGTAACAATTTTTTGGTTTTTTGGTTTTCAATTTTTAGTTTTTAAAAATTAAGCCAATAAACCCTCATTCTGTGACCTTGAAATTTTTTGTTTTGTTATCTATTTTCTACCAATATTTTTTAAAATCCAAGCCAAGATTTAAAAAAAAAAAGTATTTTTTTTGTTTGAGTCTAATAGGTCGTCTTTTAATTTTAAAAAGTATCTATTGACTTTTGAACTTTTAATGTTGTGCCTAAAATAAATTTTTGGACTTTAAAAATGTCAAATAGATCGATGAAATTTCAAATTTATGTCAATAAAGGGTTAGGTGACATATTTAATATCTTTTAAATTAATAAATCTATTGCATAAAATTAAATTTTGTAGCTAATTTAACATCAACATTCAATTTTGTTCTCGGATTCATTACTTTTAAGAAATATAATGTTGGATAGTGTCAATGATTTATTATATATAATTGAAAGTTGAAAAATTTATTAGTTACAAAATAAAATAAAAAATTTTGAGAACTTATTAGTCACTTTTTAAAGCTTAGAGTCTTATTAGACACAAATTTAAAAGTTTAGAAACTTATTTAAAAAAATTAAAATTAACCTATTAGACACAAACTTAAAAATTCAAAGAATTAAACTTTATAAATTCACGGTAATACACATTTTAAAACCCAAACTTTTAGCACATCCACCTTAATTATTTTGTCTTGTCAACCTACCCTTTTGTTTAAATAGTAACCAACTACATCATATTAAATTATCAGTCATTAGTCAAATCAATAATAGACTAGTATTATATTAGAGACAGTTGCAAATATTTATAGCAATTAGATTTAAAGTATTAGTATATATGACAACATTTTAAAAAAAATTGCAAATATAGCAAAATCTATCAGTGACAGACTTTTATGGTCTAGGTGGTCTATCACTGATAGACCATATAAGAGTTTATCAGCAATAAAAGTCCATCACTGATAGATTTTGCTATATTTGTAATTTTTTTAAAAATGTTGCTATACACTTGGTTACTATCCCTAAAATTACATGCATTAAAGTTGAATTTGAAGTTTGTATATTTATTTTTTGTGTTTGGTTTAGGATAACATATGTTGGTGGAGGCATACCAGAATCATTGTTGAATGAGATGTTTGGGAATGATATTGAGGATCCATCTGAAGAAGGTTTCAGCCTATTTATAAGTAGAAAACTTGTGAAGATGATGAATGGAGATGTGAGATATGTAAGGGAAGCAGGCAACTCAAGCTTCATTATAACTCTTGAGCTTGCTGCTGCTCATAACCTAAGAACCTAA

mRNA sequence

ATGGTCAAAGACTTAGGTGAAAATGTGGTGGGAGTGTGCTTTGTAGCACAAGACATAACATGTCAAAAGATGGTAATGGACAAGTTCACAAAACTACAAGGTGATTACAAAGCCATTGTACAAAACCCTAATCCACTAATCCCTCCAATATTTGGATTAGATGAATTTGGTTGGTGTTCAGAATGGAATTTAGCAATGACAAAGCTAAGTGGATGGTCTCGTGAAGCAGTTCTCAACAAAATGCTTTTAGGAGAAGTTTTTGGTACACAATTAAACTCTTCATCATGTTGTTGCCAACTCAAGAATCAAGAAGCTTTTGTGAATCTTGGGATTGTGTTGAACAATGCAATGAGTGGTCAAGATCCTGAAAAGAATATCTCATTTGGTTTCTATGCAAGAAATGGGATGTTTGTAGAATGTCTTCTATGTGTTAATAAGATATTGGATAGAGATGGTGGAATTATTGGAGTTTTTTGCTTCTTGCAACTTGCTAGTCAAGAGCTTCAACAAGCATTGAGTATTCAAAAATTATGTGAGAGAACAGCTTTGAATAGGTTGAAGGCATTGGGATATATGAAGAGGCAGATTCAAAATCCTCTTTGTGGGATCATTTTTTCAAGGAAAATGTTGCAGCAAACTCAGTTGGGAGTGGAACAGAAGCAACTTTTGCATAATAGTGTCAATTGTCAAAGGCAAATCTCCAAGGTTCTTGATGAATCTCATGATCTTGATCAGATTATCCAAGGTTTCATTGATTTAGAAATGGTTGAGTTTTCATTGTATGAAGTATTGGTGGTATCAATTAGTCAAGTTATGATGAAGAGCAAAGGGAAAGGTATTCAAATAGCAAATGAGATTGCAGAAGAGATCATGTCTGAGACCTTATATGGAGATAATTTGAGACTTCAACAAGTCATGGCTGATTTCTTGTTGATATCAGTTAATTATGCACCAACTGGAGGCCAACTCATGGTTTCAACAAATTTGACTAAGGATAAATTAGGAAACTCAGTGCATCTTGTGCATCTTGAATTCAGAAAACTTGTGAAGATGATGAATGGAGATGTGAGATATGTAAGGGAAGCAGGCAACTCAAGCTTCATTATAACTCTTGAGCTTGCTGCTGCTCATAACCTAAGAACCTAA

Coding sequence (CDS)

ATGGTCAAAGACTTAGGTGAAAATGTGGTGGGAGTGTGCTTTGTAGCACAAGACATAACATGTCAAAAGATGGTAATGGACAAGTTCACAAAACTACAAGGTGATTACAAAGCCATTGTACAAAACCCTAATCCACTAATCCCTCCAATATTTGGATTAGATGAATTTGGTTGGTGTTCAGAATGGAATTTAGCAATGACAAAGCTAAGTGGATGGTCTCGTGAAGCAGTTCTCAACAAAATGCTTTTAGGAGAAGTTTTTGGTACACAATTAAACTCTTCATCATGTTGTTGCCAACTCAAGAATCAAGAAGCTTTTGTGAATCTTGGGATTGTGTTGAACAATGCAATGAGTGGTCAAGATCCTGAAAAGAATATCTCATTTGGTTTCTATGCAAGAAATGGGATGTTTGTAGAATGTCTTCTATGTGTTAATAAGATATTGGATAGAGATGGTGGAATTATTGGAGTTTTTTGCTTCTTGCAACTTGCTAGTCAAGAGCTTCAACAAGCATTGAGTATTCAAAAATTATGTGAGAGAACAGCTTTGAATAGGTTGAAGGCATTGGGATATATGAAGAGGCAGATTCAAAATCCTCTTTGTGGGATCATTTTTTCAAGGAAAATGTTGCAGCAAACTCAGTTGGGAGTGGAACAGAAGCAACTTTTGCATAATAGTGTCAATTGTCAAAGGCAAATCTCCAAGGTTCTTGATGAATCTCATGATCTTGATCAGATTATCCAAGGTTTCATTGATTTAGAAATGGTTGAGTTTTCATTGTATGAAGTATTGGTGGTATCAATTAGTCAAGTTATGATGAAGAGCAAAGGGAAAGGTATTCAAATAGCAAATGAGATTGCAGAAGAGATCATGTCTGAGACCTTATATGGAGATAATTTGAGACTTCAACAAGTCATGGCTGATTTCTTGTTGATATCAGTTAATTATGCACCAACTGGAGGCCAACTCATGGTTTCAACAAATTTGACTAAGGATAAATTAGGAAACTCAGTGCATCTTGTGCATCTTGAATTCAGAAAACTTGTGAAGATGATGAATGGAGATGTGAGATATGTAAGGGAAGCAGGCAACTCAAGCTTCATTATAACTCTTGAGCTTGCTGCTGCTCATAACCTAAGAACCTAA

Protein sequence

MVKDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEWNLAMTKLSGWSREAVLNKMLLGEVFGTQLNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDPEKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERTALNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESHDLDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLRLQQVMADFLLISVNYAPTGGQLMVSTNLTKDKLGNSVHLVHLEFRKLVKMMNGDVRYVREAGNSSFIITLELAAAHNLRT

Homology

[Close]

BLAST of Lsi08G007580 vs. ExPASy Swiss-Prot
Match: P06592 (Phytochrome A OS=Cucurbita pepo OX=3663 GN=PHYA PE=2 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 8.0e-160
Identity = 296/413 (71.67%), Postives = 336/413 (81.36%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            +DL ENVVGV FVAQDIT QKMVMDKFT+L+GDYKAIVQNPNPLIPPIFG DEFGWCSEW
Sbjct: 717  RDLRENVVGVFFVAQDITGQKMVMDKFTRLEGDYKAIVQNPNPLIPPIFGSDEFGWCSEW 776

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQLNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDP 122
            N AM KL+GWSRE V++KMLLGEVFG        CC+LKNQEAFVNLGIVLNNAM GQDP
Sbjct: 777  NPAMAKLTGWSREEVIDKMLLGEVFGVH----KSCCRLKNQEAFVNLGIVLNNAMCGQDP 836

Query: 123  EKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERTA 182
            EK  SFGF ARNGM+VECLLCVNKILD+DG + G FCFLQL S ELQQAL+IQ+LCE+TA
Sbjct: 837  EK-ASFGFLARNGMYVECLLCVNKILDKDGAVTGFFCFLQLPSHELQQALNIQRLCEQTA 896

Query: 183  LNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESHD 242
            L RL+ALGY+KRQIQNPL GIIFSR++L++T+LGVEQK+LL  S  CQ+QISKVLDES D
Sbjct: 897  LKRLRALGYIKRQIQNPLSGIIFSRRLLERTELGVEQKELLRTSGLCQKQISKVLDES-D 956

Query: 243  LDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLRL 302
            +D+II GFIDLEM EF+L+EVL+VSISQVM+K KGKGIQI NE  EE MSETLYGD+LRL
Sbjct: 957  IDKIIDGFIDLEMDEFTLHEVLMVSISQVMLKIKGKGIQIVNETPEEAMSETLYGDSLRL 1016

Query: 303  QQVMADFLLISVNYAPTGGQLMVSTNLTKDKLGNSVHLVHLEF----------------- 362
            QQV+ADFLLISV+YAP+GGQL +ST++TK++LG SVHLVHLEF                 
Sbjct: 1017 QQVLADFLLISVSYAPSGGQLTISTDVTKNQLGKSVHLVHLEFRITYAGGGIPESLLNEM 1076

Query: 363  -----------------RKLVKMMNGDVRYVREAGNSSFIITLELAAAHNLRT 382
                             RKLVK+MNGDVRY+REAG SSFIIT+ELAAAH  RT
Sbjct: 1077 FGSEEDASEEGFSLLISRKLVKLMNGDVRYMREAGKSSFIITVELAAAHKSRT 1123

[Close]

BLAST of Lsi08G007580 vs. ExPASy Swiss-Prot
Match: B4YB07 (Phytochrome A-2 OS=Glycine max OX=3847 GN=PHYA2 PE=1 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 8.0e-144
Identity = 264/412 (64.08%), Postives = 318/412 (77.18%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            +DL +NVVGVCFVA DIT QK VMDKFT+++GDYKAIVQN NPLIPPIFG DEFGWC EW
Sbjct: 717  RDLRDNVVGVCFVAHDITAQKNVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEW 776

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQLNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDP 122
            N AMTKL+GW RE V++KMLLGE+FGT +      C+LKNQEAFVNLG+VLN AM+G + 
Sbjct: 777  NPAMTKLTGWKREEVMDKMLLGELFGTHM----AACRLKNQEAFVNLGVVLNKAMTGLET 836

Query: 123  EKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERTA 182
            EK + FGF+ARNG +VECLL V+K LD +G + GVFCFLQLAS ELQQAL IQ+L E+TA
Sbjct: 837  EK-VPFGFFARNGKYVECLLSVSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTA 896

Query: 183  LNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESHD 242
            L RL AL YMKRQI+NPLCGIIFSRKML+ T LG EQKQLL  S  CQ+Q+SK+LD+S D
Sbjct: 897  LKRLNALSYMKRQIRNPLCGIIFSRKMLEGTALGTEQKQLLRTSAQCQQQLSKILDDS-D 956

Query: 243  LDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLRL 302
            LD II G++DLEM EF+L+EVLV S+SQVM KS GK I+I N++AE+I+ ETLYGD+LRL
Sbjct: 957  LDSIIDGYLDLEMAEFTLHEVLVTSLSQVMTKSNGKSIRIVNDVAEQIVMETLYGDSLRL 1016

Query: 303  QQVMADFLLISVNYAPTGGQLMVSTNLTKDKLGNSVHLVHLEF----------------- 362
            QQV+ADFLLIS+N+ P GGQ++V+  LTK++LG SVHLV LE                  
Sbjct: 1017 QQVLADFLLISINFTPNGGQVVVAGTLTKEQLGKSVHLVKLELSITHGGSGVPEALLNQM 1076

Query: 363  -----------------RKLVKMMNGDVRYVREAGNSSFIITLELAAAHNLR 381
                             RKL+K+MNGDVRY+REAG S+FI++ ELAAAHNL+
Sbjct: 1077 FGNNGLESEEGISLLISRKLLKLMNGDVRYLREAGKSAFILSAELAAAHNLK 1122

[Close]

BLAST of Lsi08G007580 vs. ExPASy Swiss-Prot
Match: P42500 (Phytochrome A OS=Glycine max OX=3847 GN=PHYA PE=2 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 2.2e-141
Identity = 260/412 (63.11%), Postives = 314/412 (76.21%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            +DL +NVVGVCFVA DIT QK VMDKF +++GDYKAIVQN NPLIPPIFG DEFGWC EW
Sbjct: 725  RDLRDNVVGVCFVAHDITAQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWCCEW 784

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQLNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDP 122
            N AM KL+GW RE V++KMLLGE+FGTQ+      C+LKNQEAFVNLG+VLN AM+G + 
Sbjct: 785  NPAMMKLTGWKREEVMDKMLLGEIFGTQM----AACRLKNQEAFVNLGVVLNKAMTGSET 844

Query: 123  EKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERTA 182
            EK + FGF+ARNG +VECLL V+K LD +G + GVFCFLQLAS ELQQAL IQ+L E+TA
Sbjct: 845  EK-VPFGFFARNGKYVECLLSVSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTA 904

Query: 183  LNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESHD 242
              RL AL YMKRQI+NPLCGI+FSRKML+ T LG EQKQLL  S  CQ+Q+SK+LD+S D
Sbjct: 905  SKRLNALSYMKRQIRNPLCGIVFSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDS-D 964

Query: 243  LDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLRL 302
            LD II G++DLEM EF+L+EVLV S+SQVM KS GK I+I N++A  IM ETLYGD+LRL
Sbjct: 965  LDTIIDGYLDLEMAEFTLHEVLVTSLSQVMEKSNGKSIRIVNDVAGHIMMETLYGDSLRL 1024

Query: 303  QQVMADFLLISVNYAPTGGQLMVSTNLTKDKLGNSVHLVHLEF----------------- 362
            QQV+ADFLLIS+N+ P GGQ++V+ +LTK++LG SVHLV LE                  
Sbjct: 1025 QQVLADFLLISINFTPNGGQVVVAGSLTKEQLGKSVHLVKLELSITHGGSGVPEVLLNQM 1084

Query: 363  -----------------RKLVKMMNGDVRYVREAGNSSFIITLELAAAHNLR 381
                              KL+K+MNGDVRY+REAG S+FI++ ELAAAHNL+
Sbjct: 1085 FGNNGLESEEGISLLIRAKLLKLMNGDVRYLREAGKSAFILSAELAAAHNLK 1130

[Close]

BLAST of Lsi08G007580 vs. ExPASy Swiss-Prot
Match: P14712 (Phytochrome A OS=Arabidopsis thaliana OX=3702 GN=PHYA PE=1 SV=2)

HSP 1 Score: 501.5 bits (1290), Expect = 8.3e-141
Identity = 256/409 (62.59%), Postives = 317/409 (77.51%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            +DL ENVVGVCFVA D+T QK VMDKFT+++GDYKAI+QNPNPLIPPIFG DEFGWC+EW
Sbjct: 719  RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEW 778

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQLNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDP 122
            N AM+KL+G  RE V++KMLLGEVFGTQ      CC+LKNQEAFVNLGIVLNNA++ QDP
Sbjct: 779  NPAMSKLTGLKREEVIDKMLLGEVFGTQ----KSCCRLKNQEAFVNLGIVLNNAVTSQDP 838

Query: 123  EKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERTA 182
            EK +SF F+ R G +VECLLCV+K LDR+G + GVFCFLQLAS ELQQAL +Q+L ERTA
Sbjct: 839  EK-VSFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTA 898

Query: 183  LNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESHD 242
            + RLKAL Y+KRQI+NPL GI+F+RKM++ T+LG EQ+++L  S  CQ+Q+SK+LD+S D
Sbjct: 899  VKRLKALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDS-D 958

Query: 243  LDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLRL 302
            L+ II+G +DLEM EF+L EVL  S SQVMMKS GK ++I NE  EE+MS+TLYGD++RL
Sbjct: 959  LESIIEGCLDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRL 1018

Query: 303  QQVMADFLLISVNYAPTGGQLMVSTNLTKDKLGNSVHLVHLEF----------------- 362
            QQV+ADF+L++VN+ P+GGQL VS +L KD+LG SVHL +LE                  
Sbjct: 1019 QQVLADFMLMAVNFTPSGGQLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQM 1078

Query: 363  -----------------RKLVKMMNGDVRYVREAGNSSFIITLELAAAH 378
                             RKLVK+MNGDV+Y+R+AG SSFIIT ELAAA+
Sbjct: 1079 FGTEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAAN 1121

[Close]

BLAST of Lsi08G007580 vs. ExPASy Swiss-Prot
Match: P93673 (Phytochrome type A OS=Lathyrus sativus OX=3860 GN=PHYA PE=3 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 8.3e-141
Identity = 257/412 (62.38%), Postives = 319/412 (77.43%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            +DL ENVVGVCFVAQDIT QK VMDKFT+++GDYKAIVQNPN LIPPIFG DEFGWC EW
Sbjct: 718  RDLRENVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEW 777

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQLNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDP 122
            N AM KL+GW RE V++KMLLGEVFGTQ++    CC+LKNQEAFVN GIVLN AM+G + 
Sbjct: 778  NAAMIKLTGWKREEVMDKMLLGEVFGTQMS----CCRLKNQEAFVNFGIVLNKAMTGLET 837

Query: 123  EKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERTA 182
            EK ++FGF++R G +VECLL V+K +D +G + GVFCFLQLAS ELQQAL IQ+L E+TA
Sbjct: 838  EK-VAFGFFSRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTA 897

Query: 183  LNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESHD 242
            L RLK L YMKRQI+NPL GI+FS KML+ T L  EQKQ+++ S  CQRQ+SK+LD+S D
Sbjct: 898  LKRLKVLTYMKRQIRNPLAGIVFSSKMLEGTDLETEQKQIVNTSSQCQRQLSKILDDS-D 957

Query: 243  LDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLRL 302
            LD II G++DLEM EF+L+EVLV S+SQVM +S  KGI+IAN++AE I  E+LYGD+LRL
Sbjct: 958  LDGIIDGYLDLEMAEFTLHEVLVTSLSQVMNRSNTKGIRIANDVAEHIAKESLYGDSLRL 1017

Query: 303  QQVMADFLLISVNYAPTGGQLMVSTNLTKDKLGNSVHLVHLEF----------------- 362
            QQV+ADFLLIS+N  P GGQ++++++LTK++LG SVHLV+LE                  
Sbjct: 1018 QQVLADFLLISINSTPNGGQVVIASSLTKEQLGKSVHLVNLELSITHGGSGVPEAALNQM 1077

Query: 363  -----------------RKLVKMMNGDVRYVREAGNSSFIITLELAAAHNLR 381
                             RKL+K+MNGDVRY++EAG SSFI+++ELAAAH L+
Sbjct: 1078 FGNNVLESEEGISLHISRKLLKLMNGDVRYLKEAGKSSFILSVELAAAHKLK 1123

[Close]

BLAST of Lsi08G007580 vs. ExPASy TrEMBL
Match: A0A0A0KHC2 (Phytochrome OS=Cucumis sativus OX=3659 GN=Csa_6G403050 PE=3 SV=1)

HSP 1 Score: 656.4 bits (1692), Expect = 7.4e-185
Identity = 341/414 (82.37%), Postives = 357/414 (86.23%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            KDL ENVVGVCFVAQDITCQK+VMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWC+EW
Sbjct: 723  KDLSENVVGVCFVAQDITCQKIVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCTEW 782

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQL-NSSSCCCQLKNQEAFVNLGIVLNNAMSGQD 122
            NLAMTKLSGWSRE+V+NKMLLGEVFGTQL NSSSCCCQLKNQEAFVNLGIVLNNAMSGQD
Sbjct: 783  NLAMTKLSGWSRESVVNKMLLGEVFGTQLNNSSSCCCQLKNQEAFVNLGIVLNNAMSGQD 842

Query: 123  PEKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERT 182
            PEKNISFGFY RNGMFVECLLCVNKILDRDG +IGVFCFLQLASQELQQALSIQKLCERT
Sbjct: 843  PEKNISFGFYGRNGMFVECLLCVNKILDRDGAVIGVFCFLQLASQELQQALSIQKLCERT 902

Query: 183  ALNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESH 242
            A NRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLL NSVNCQRQISKVLDESH
Sbjct: 903  ASNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLINSVNCQRQISKVLDESH 962

Query: 243  DLDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLR 302
            DLD IIQG I+LEMVEFSLYEVLVV+ISQVMMKSKGKGIQI NE+ EEIM ETLYGDNLR
Sbjct: 963  DLDHIIQGVIELEMVEFSLYEVLVVAISQVMMKSKGKGIQIENEVGEEIMCETLYGDNLR 1022

Query: 303  LQQVMADFLLISVNYAPTGGQLMVSTNLT-KDKLGNSVHLVHLEF--------------- 362
            +QQ+MADFLLISV+YAPTGGQLM+ST  T KD   NS+HL+HLEF               
Sbjct: 1023 VQQIMADFLLISVHYAPTGGQLMLSTTFTNKDHFRNSLHLLHLEFRITYVGGGIPESLLN 1082

Query: 363  -----------------------RKLVKMMNGDVRYVREAGNSSFIITLELAAA 377
                                   RKLVKMMNGDVRYVREA  S+FIITL+LAAA
Sbjct: 1083 EMFGNDNMDHEDSSEEGYSLFISRKLVKMMNGDVRYVREAAKSTFIITLQLAAA 1136

[Close]

BLAST of Lsi08G007580 vs. ExPASy TrEMBL
Match: A0A1S3CMF0 (Phytochrome OS=Cucumis melo OX=3656 GN=LOC103502594 PE=3 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 9.7e-185
Identity = 340/415 (81.93%), Postives = 358/415 (86.27%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            KDL ENVVGVCFVAQDITCQK+VMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWC+EW
Sbjct: 734  KDLSENVVGVCFVAQDITCQKIVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCTEW 793

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQL-NSSSCCCQLKNQEAFVNLGIVLNNAMSGQD 122
            NLAMTKLSGWSRE+V+NKMLLGEVFGTQL NSSSCCCQLKNQEAFVNLGIVLNNAMSGQD
Sbjct: 794  NLAMTKLSGWSRESVVNKMLLGEVFGTQLNNSSSCCCQLKNQEAFVNLGIVLNNAMSGQD 853

Query: 123  PEKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERT 182
            PEKNISFGFY RNGMFVECLLCVNKILDRDGG+IGVFCFLQLASQELQQAL+IQKLCERT
Sbjct: 854  PEKNISFGFYGRNGMFVECLLCVNKILDRDGGVIGVFCFLQLASQELQQALNIQKLCERT 913

Query: 183  ALNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESH 242
            ALNRLKALGYMKRQIQNPL GIIFSRKMLQQTQLGVEQKQLL NSVNCQRQISKVLDESH
Sbjct: 914  ALNRLKALGYMKRQIQNPLSGIIFSRKMLQQTQLGVEQKQLLINSVNCQRQISKVLDESH 973

Query: 243  DLDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLR 302
            DLD IIQG ++LEMVEFSLYEVLVV+ISQVMMKSKGKGIQI NE+ EEIM ETLYGDNLR
Sbjct: 974  DLDHIIQGLVELEMVEFSLYEVLVVAISQVMMKSKGKGIQIENEVGEEIMCETLYGDNLR 1033

Query: 303  LQQVMADFLLISVNYAPTGGQLMVSTNLTKD--KLGNSVHLVHLEF-------------- 362
            LQQ+MADFLLISV+YAPTGGQLM+ST  T +    GNS+HL+HLEF              
Sbjct: 1034 LQQIMADFLLISVHYAPTGGQLMLSTTFTNNDHHFGNSLHLLHLEFRITYVGGGIPESLL 1093

Query: 363  ------------------------RKLVKMMNGDVRYVREAGNSSFIITLELAAA 377
                                    RKLVKMMNGDVRYVREA  S+FIITL+LAAA
Sbjct: 1094 NEMFGNDIIDHEDSSDEGFSLFISRKLVKMMNGDVRYVREAAKSTFIITLQLAAA 1148

[Close]

BLAST of Lsi08G007580 vs. ExPASy TrEMBL
Match: A0A6J1DYB9 (Phytochrome OS=Momordica charantia OX=3673 GN=LOC111024646 PE=3 SV=1)

HSP 1 Score: 594.0 bits (1530), Expect = 4.5e-166
Identity = 306/412 (74.27%), Postives = 345/412 (83.74%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            +DL ENVVGVCFVAQDIT QKMVMDKFT+L+GDYKAIV+NPNPLIPPIFG DEFGWCSEW
Sbjct: 717  RDLRENVVGVCFVAQDITGQKMVMDKFTRLEGDYKAIVENPNPLIPPIFGSDEFGWCSEW 776

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQLNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDP 122
            N AMTKL+GWSRE V++KMLLGEVFG    +   CC+LKNQEAFVNLG+VLNNAMSGQDP
Sbjct: 777  NPAMTKLTGWSREEVVDKMLLGEVFG----AHKSCCRLKNQEAFVNLGVVLNNAMSGQDP 836

Query: 123  EKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERTA 182
            EK + FGF ARNGM+VECLLCVNKILDRDG + GVFCFLQLAS ELQQAL+IQ+LCE+TA
Sbjct: 837  EK-VPFGFVARNGMYVECLLCVNKILDRDGAVTGVFCFLQLASHELQQALNIQRLCEQTA 896

Query: 183  LNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESHD 242
            L RLKALGY+KRQIQNPL GIIFSR++L++T+LG+EQKQLLH S++CQ+QISK+LDES D
Sbjct: 897  LKRLKALGYIKRQIQNPLSGIIFSRRLLERTELGIEQKQLLHTSIHCQKQISKILDES-D 956

Query: 243  LDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLRL 302
            LD+II GFIDLEMVEF+L EVL VSISQVM+KSKGKGIQ+ N+ AEE MSETLYGD+LRL
Sbjct: 957  LDKIIDGFIDLEMVEFTLDEVLTVSISQVMIKSKGKGIQVVNDTAEEAMSETLYGDSLRL 1016

Query: 303  QQVMADFLLISVNYAPTGGQLMVSTNLTKDKLGNSVHLVHLEF----------------- 362
            QQV+ADFLLISVNYAPTGGQL +STNLTKD+LG SVHLVHLEF                 
Sbjct: 1017 QQVLADFLLISVNYAPTGGQLTISTNLTKDQLGKSVHLVHLEFRITYAGGGIPESLLNEM 1076

Query: 363  -----------------RKLVKMMNGDVRYVREAGNSSFIITLELAAAHNLR 381
                             RKLVK+MNGDVRY+REAG SSFIIT+ELAAAH  R
Sbjct: 1077 FGSDEDASEEGFSLLISRKLVKLMNGDVRYMREAGKSSFIITVELAAAHKSR 1122

[Close]

BLAST of Lsi08G007580 vs. ExPASy TrEMBL
Match: A0A6J1GJ14 (Phytochrome OS=Cucurbita moschata OX=3662 GN=LOC111454645 PE=3 SV=1)

HSP 1 Score: 594.0 bits (1530), Expect = 4.5e-166
Identity = 309/409 (75.55%), Postives = 342/409 (83.62%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            KDL ENVVGVCFVAQDIT +K VMDKFTKLQGDYKAIVQNPNPLIPPIFG+DEFGWC+EW
Sbjct: 716  KDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGVDEFGWCTEW 775

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQLNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDP 122
            NLAM  LSGWSRE VLNKMLLGEVFG+       CC +KNQEAFVNLGIVLNNAMSGQD 
Sbjct: 776  NLAMANLSGWSREEVLNKMLLGEVFGS-------CCHVKNQEAFVNLGIVLNNAMSGQDS 835

Query: 123  EKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERTA 182
            +K ISFGF+AR+GMFVECLLCVNKI+DRDG +IGVFCFLQLASQELQQAL++QKLCERTA
Sbjct: 836  DK-ISFGFFARDGMFVECLLCVNKIMDRDGEVIGVFCFLQLASQELQQALNVQKLCERTA 895

Query: 183  LNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESHD 242
            L RLKALGY+KRQIQNPLCGI+FS KML+++QLG EQ QLL NS +CQRQI KVL +S D
Sbjct: 896  LKRLKALGYIKRQIQNPLCGIVFSSKMLERSQLGDEQNQLLLNSGDCQRQIFKVLHDSDD 955

Query: 243  LDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLRL 302
            LD+II+GFIDLEMVEFSL+E LVVSISQVMMKSKGKGIQI NE+AEEIMSETLYGD+LRL
Sbjct: 956  LDKIIEGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMSETLYGDSLRL 1015

Query: 303  QQVMADFLLISVNYAPTGGQLMVSTNLTKDKLGNSVHLVHLEF----------------- 362
            QQVMADFLLISVNYAPTG  +MVSTN+TKD+ G SV+LVH+EF                 
Sbjct: 1016 QQVMADFLLISVNYAPTGSSIMVSTNMTKDESGKSVNLVHVEFRITYVGGGMPESLLNEM 1075

Query: 363  -----------------RKLVKMMNGDVRYVREAGNSSFIITLELAAAH 378
                             RKLVK+MNG+VRYVREA NS+FIITL+LAAAH
Sbjct: 1076 FGNDEEASEEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQLAAAH 1116

[Close]

BLAST of Lsi08G007580 vs. ExPASy TrEMBL
Match: A0A6J1KP52 (Phytochrome OS=Cucurbita maxima OX=3661 GN=LOC111495998 PE=3 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 1.5e-164
Identity = 306/409 (74.82%), Postives = 339/409 (82.89%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            KDL ENVVGVCFVAQDIT +K VMDKFTKLQGDYKAIVQNPNPLIPPIFG+DEFGWC+EW
Sbjct: 713  KDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGVDEFGWCTEW 772

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQLNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDP 122
            NLAM  LSGWSRE VLNKMLLGEVFG+       CC +KNQEAFVNLGIVLNNAMSGQD 
Sbjct: 773  NLAMANLSGWSREEVLNKMLLGEVFGS-------CCHVKNQEAFVNLGIVLNNAMSGQDS 832

Query: 123  EKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERTA 182
            +K ISFGF+ R+GMFVECLLCVNKI+DRDG +IGVFCFLQLASQELQQAL++QKLCERTA
Sbjct: 833  DK-ISFGFFGRSGMFVECLLCVNKIMDRDGEVIGVFCFLQLASQELQQALNVQKLCERTA 892

Query: 183  LNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESHD 242
            L RLKALGY+KRQIQNPLCGI+FS KML+ +QLG EQ QLL NS +CQRQI KVL +S D
Sbjct: 893  LKRLKALGYIKRQIQNPLCGIVFSSKMLETSQLGDEQNQLLLNSGDCQRQIFKVLHDSDD 952

Query: 243  LDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLRL 302
            LD+II+GFIDLEMVEFSL+E LVVSISQVMMKS+GKGIQI NE+AEEIMSETLYGD+LRL
Sbjct: 953  LDKIIEGFIDLEMVEFSLHEALVVSISQVMMKSQGKGIQIVNEVAEEIMSETLYGDSLRL 1012

Query: 303  QQVMADFLLISVNYAPTGGQLMVSTNLTKDKLGNSVHLVHLEF----------------- 362
            QQVMADFLLIS+NY PTG  +MVSTNLTKD+ G SV+LVH+EF                 
Sbjct: 1013 QQVMADFLLISINYTPTGSSIMVSTNLTKDESGKSVNLVHVEFRITYVGGGMPESLLNEM 1072

Query: 363  -----------------RKLVKMMNGDVRYVREAGNSSFIITLELAAAH 378
                             RKLVK+MNG+VRYVREA NS+FIITL+LAAAH
Sbjct: 1073 FGNDEEASEEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQLAAAH 1113

[Close]

BLAST of Lsi08G007580 vs. NCBI nr
Match: XP_038884425.1 (phytochrome A-like [Benincasa hispida])

HSP 1 Score: 693.0 bits (1787), Expect = 1.5e-195
Identity = 356/413 (86.20%), Postives = 366/413 (88.62%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            KDL ENVVGVCFVAQDITCQK+VMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW
Sbjct: 732  KDLSENVVGVCFVAQDITCQKIVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 791

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQLNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDP 122
            NLAMTKLSGWSREAVLNKMLLGEVFGTQLNS SCCC LKNQEAFVNLGIVLNNAMSGQD 
Sbjct: 792  NLAMTKLSGWSREAVLNKMLLGEVFGTQLNSKSCCCHLKNQEAFVNLGIVLNNAMSGQDT 851

Query: 123  EKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERTA 182
            EKNISFGF+A+NG+FVECLLCVNKILD+DGG+IGVFCFLQLASQELQQALSIQKLCERTA
Sbjct: 852  EKNISFGFHAKNGIFVECLLCVNKILDKDGGVIGVFCFLQLASQELQQALSIQKLCERTA 911

Query: 183  LNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESHD 242
            LNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESHD
Sbjct: 912  LNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESHD 971

Query: 243  LDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLRL 302
            LD IIQG I+LEMVEFSLYEVLVV+ISQVMMKSKGKGIQI NE+AEEIM+ETLYGDNLRL
Sbjct: 972  LDHIIQGLIELEMVEFSLYEVLVVAISQVMMKSKGKGIQIENEVAEEIMTETLYGDNLRL 1031

Query: 303  QQVMADFLLISVNYAPTGGQLMVSTNLTKDKLGNSVHLVHLEF----------------- 362
            QQVMADFLLISVNYAPTGGQLMVSTN TK  LGNSVHLVHLEF                 
Sbjct: 1032 QQVMADFLLISVNYAPTGGQLMVSTNFTKAHLGNSVHLVHLEFRITYVGGGIPESLLNEM 1091

Query: 363  -----------------RKLVKMMNGDVRYVREAGNSSFIITLELAAAHNLRT 382
                             RKLVKMMNGDVRYVRE G SSFIITLELAAAH LRT
Sbjct: 1092 FGNDEDPSEEGFSLFISRKLVKMMNGDVRYVREFGKSSFIITLELAAAHKLRT 1144

[Close]

BLAST of Lsi08G007580 vs. NCBI nr
Match: XP_031742642.1 (phytochrome A [Cucumis sativus] >KAE8647286.1 hypothetical protein Csa_004164 [Cucumis sativus])

HSP 1 Score: 656.4 bits (1692), Expect = 1.5e-184
Identity = 341/414 (82.37%), Postives = 357/414 (86.23%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            KDL ENVVGVCFVAQDITCQK+VMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWC+EW
Sbjct: 732  KDLSENVVGVCFVAQDITCQKIVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCTEW 791

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQL-NSSSCCCQLKNQEAFVNLGIVLNNAMSGQD 122
            NLAMTKLSGWSRE+V+NKMLLGEVFGTQL NSSSCCCQLKNQEAFVNLGIVLNNAMSGQD
Sbjct: 792  NLAMTKLSGWSRESVVNKMLLGEVFGTQLNNSSSCCCQLKNQEAFVNLGIVLNNAMSGQD 851

Query: 123  PEKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERT 182
            PEKNISFGFY RNGMFVECLLCVNKILDRDG +IGVFCFLQLASQELQQALSIQKLCERT
Sbjct: 852  PEKNISFGFYGRNGMFVECLLCVNKILDRDGAVIGVFCFLQLASQELQQALSIQKLCERT 911

Query: 183  ALNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESH 242
            A NRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLL NSVNCQRQISKVLDESH
Sbjct: 912  ASNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLINSVNCQRQISKVLDESH 971

Query: 243  DLDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLR 302
            DLD IIQG I+LEMVEFSLYEVLVV+ISQVMMKSKGKGIQI NE+ EEIM ETLYGDNLR
Sbjct: 972  DLDHIIQGVIELEMVEFSLYEVLVVAISQVMMKSKGKGIQIENEVGEEIMCETLYGDNLR 1031

Query: 303  LQQVMADFLLISVNYAPTGGQLMVSTNLT-KDKLGNSVHLVHLEF--------------- 362
            +QQ+MADFLLISV+YAPTGGQLM+ST  T KD   NS+HL+HLEF               
Sbjct: 1032 VQQIMADFLLISVHYAPTGGQLMLSTTFTNKDHFRNSLHLLHLEFRITYVGGGIPESLLN 1091

Query: 363  -----------------------RKLVKMMNGDVRYVREAGNSSFIITLELAAA 377
                                   RKLVKMMNGDVRYVREA  S+FIITL+LAAA
Sbjct: 1092 EMFGNDNMDHEDSSEEGYSLFISRKLVKMMNGDVRYVREAAKSTFIITLQLAAA 1145

[Close]

BLAST of Lsi08G007580 vs. NCBI nr
Match: XP_008464788.1 (PREDICTED: phytochrome A-like [Cucumis melo] >XP_008464789.1 PREDICTED: phytochrome A-like [Cucumis melo])

HSP 1 Score: 656.0 bits (1691), Expect = 2.0e-184
Identity = 340/415 (81.93%), Postives = 358/415 (86.27%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            KDL ENVVGVCFVAQDITCQK+VMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWC+EW
Sbjct: 734  KDLSENVVGVCFVAQDITCQKIVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCTEW 793

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQL-NSSSCCCQLKNQEAFVNLGIVLNNAMSGQD 122
            NLAMTKLSGWSRE+V+NKMLLGEVFGTQL NSSSCCCQLKNQEAFVNLGIVLNNAMSGQD
Sbjct: 794  NLAMTKLSGWSRESVVNKMLLGEVFGTQLNNSSSCCCQLKNQEAFVNLGIVLNNAMSGQD 853

Query: 123  PEKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERT 182
            PEKNISFGFY RNGMFVECLLCVNKILDRDGG+IGVFCFLQLASQELQQAL+IQKLCERT
Sbjct: 854  PEKNISFGFYGRNGMFVECLLCVNKILDRDGGVIGVFCFLQLASQELQQALNIQKLCERT 913

Query: 183  ALNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESH 242
            ALNRLKALGYMKRQIQNPL GIIFSRKMLQQTQLGVEQKQLL NSVNCQRQISKVLDESH
Sbjct: 914  ALNRLKALGYMKRQIQNPLSGIIFSRKMLQQTQLGVEQKQLLINSVNCQRQISKVLDESH 973

Query: 243  DLDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLR 302
            DLD IIQG ++LEMVEFSLYEVLVV+ISQVMMKSKGKGIQI NE+ EEIM ETLYGDNLR
Sbjct: 974  DLDHIIQGLVELEMVEFSLYEVLVVAISQVMMKSKGKGIQIENEVGEEIMCETLYGDNLR 1033

Query: 303  LQQVMADFLLISVNYAPTGGQLMVSTNLTKD--KLGNSVHLVHLEF-------------- 362
            LQQ+MADFLLISV+YAPTGGQLM+ST  T +    GNS+HL+HLEF              
Sbjct: 1034 LQQIMADFLLISVHYAPTGGQLMLSTTFTNNDHHFGNSLHLLHLEFRITYVGGGIPESLL 1093

Query: 363  ------------------------RKLVKMMNGDVRYVREAGNSSFIITLELAAA 377
                                    RKLVKMMNGDVRYVREA  S+FIITL+LAAA
Sbjct: 1094 NEMFGNDIIDHEDSSDEGFSLFISRKLVKMMNGDVRYVREAAKSTFIITLQLAAA 1148

[Close]

BLAST of Lsi08G007580 vs. NCBI nr
Match: XP_022158074.1 (phytochrome A [Momordica charantia])

HSP 1 Score: 594.0 bits (1530), Expect = 9.4e-166
Identity = 306/412 (74.27%), Postives = 345/412 (83.74%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            +DL ENVVGVCFVAQDIT QKMVMDKFT+L+GDYKAIV+NPNPLIPPIFG DEFGWCSEW
Sbjct: 717  RDLRENVVGVCFVAQDITGQKMVMDKFTRLEGDYKAIVENPNPLIPPIFGSDEFGWCSEW 776

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQLNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDP 122
            N AMTKL+GWSRE V++KMLLGEVFG    +   CC+LKNQEAFVNLG+VLNNAMSGQDP
Sbjct: 777  NPAMTKLTGWSREEVVDKMLLGEVFG----AHKSCCRLKNQEAFVNLGVVLNNAMSGQDP 836

Query: 123  EKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERTA 182
            EK + FGF ARNGM+VECLLCVNKILDRDG + GVFCFLQLAS ELQQAL+IQ+LCE+TA
Sbjct: 837  EK-VPFGFVARNGMYVECLLCVNKILDRDGAVTGVFCFLQLASHELQQALNIQRLCEQTA 896

Query: 183  LNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESHD 242
            L RLKALGY+KRQIQNPL GIIFSR++L++T+LG+EQKQLLH S++CQ+QISK+LDES D
Sbjct: 897  LKRLKALGYIKRQIQNPLSGIIFSRRLLERTELGIEQKQLLHTSIHCQKQISKILDES-D 956

Query: 243  LDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLRL 302
            LD+II GFIDLEMVEF+L EVL VSISQVM+KSKGKGIQ+ N+ AEE MSETLYGD+LRL
Sbjct: 957  LDKIIDGFIDLEMVEFTLDEVLTVSISQVMIKSKGKGIQVVNDTAEEAMSETLYGDSLRL 1016

Query: 303  QQVMADFLLISVNYAPTGGQLMVSTNLTKDKLGNSVHLVHLEF----------------- 362
            QQV+ADFLLISVNYAPTGGQL +STNLTKD+LG SVHLVHLEF                 
Sbjct: 1017 QQVLADFLLISVNYAPTGGQLTISTNLTKDQLGKSVHLVHLEFRITYAGGGIPESLLNEM 1076

Query: 363  -----------------RKLVKMMNGDVRYVREAGNSSFIITLELAAAHNLR 381
                             RKLVK+MNGDVRY+REAG SSFIIT+ELAAAH  R
Sbjct: 1077 FGSDEDASEEGFSLLISRKLVKLMNGDVRYMREAGKSSFIITVELAAAHKSR 1122

[Close]

BLAST of Lsi08G007580 vs. NCBI nr
Match: XP_022951908.1 (phytochrome A-like [Cucurbita moschata])

HSP 1 Score: 594.0 bits (1530), Expect = 9.4e-166
Identity = 309/409 (75.55%), Postives = 342/409 (83.62%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            KDL ENVVGVCFVAQDIT +K VMDKFTKLQGDYKAIVQNPNPLIPPIFG+DEFGWC+EW
Sbjct: 716  KDLCENVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGVDEFGWCTEW 775

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQLNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDP 122
            NLAM  LSGWSRE VLNKMLLGEVFG+       CC +KNQEAFVNLGIVLNNAMSGQD 
Sbjct: 776  NLAMANLSGWSREEVLNKMLLGEVFGS-------CCHVKNQEAFVNLGIVLNNAMSGQDS 835

Query: 123  EKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERTA 182
            +K ISFGF+AR+GMFVECLLCVNKI+DRDG +IGVFCFLQLASQELQQAL++QKLCERTA
Sbjct: 836  DK-ISFGFFARDGMFVECLLCVNKIMDRDGEVIGVFCFLQLASQELQQALNVQKLCERTA 895

Query: 183  LNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESHD 242
            L RLKALGY+KRQIQNPLCGI+FS KML+++QLG EQ QLL NS +CQRQI KVL +S D
Sbjct: 896  LKRLKALGYIKRQIQNPLCGIVFSSKMLERSQLGDEQNQLLLNSGDCQRQIFKVLHDSDD 955

Query: 243  LDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLRL 302
            LD+II+GFIDLEMVEFSL+E LVVSISQVMMKSKGKGIQI NE+AEEIMSETLYGD+LRL
Sbjct: 956  LDKIIEGFIDLEMVEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMSETLYGDSLRL 1015

Query: 303  QQVMADFLLISVNYAPTGGQLMVSTNLTKDKLGNSVHLVHLEF----------------- 362
            QQVMADFLLISVNYAPTG  +MVSTN+TKD+ G SV+LVH+EF                 
Sbjct: 1016 QQVMADFLLISVNYAPTGSSIMVSTNMTKDESGKSVNLVHVEFRITYVGGGMPESLLNEM 1075

Query: 363  -----------------RKLVKMMNGDVRYVREAGNSSFIITLELAAAH 378
                             RKLVK+MNG+VRYVREA NS+FIITL+LAAAH
Sbjct: 1076 FGNDEEASEEGFSLLVSRKLVKLMNGEVRYVREAANSTFIITLQLAAAH 1116

[Close]

BLAST of Lsi08G007580 vs. TAIR 10
Match: AT1G09570.1 (phytochrome A )

HSP 1 Score: 501.5 bits (1290), Expect = 5.9e-142
Identity = 256/409 (62.59%), Postives = 317/409 (77.51%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            +DL ENVVGVCFVA D+T QK VMDKFT+++GDYKAI+QNPNPLIPPIFG DEFGWC+EW
Sbjct: 719  RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEW 778

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQLNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDP 122
            N AM+KL+G  RE V++KMLLGEVFGTQ      CC+LKNQEAFVNLGIVLNNA++ QDP
Sbjct: 779  NPAMSKLTGLKREEVIDKMLLGEVFGTQ----KSCCRLKNQEAFVNLGIVLNNAVTSQDP 838

Query: 123  EKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERTA 182
            EK +SF F+ R G +VECLLCV+K LDR+G + GVFCFLQLAS ELQQAL +Q+L ERTA
Sbjct: 839  EK-VSFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTA 898

Query: 183  LNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESHD 242
            + RLKAL Y+KRQI+NPL GI+F+RKM++ T+LG EQ+++L  S  CQ+Q+SK+LD+S D
Sbjct: 899  VKRLKALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDS-D 958

Query: 243  LDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLRL 302
            L+ II+G +DLEM EF+L EVL  S SQVMMKS GK ++I NE  EE+MS+TLYGD++RL
Sbjct: 959  LESIIEGCLDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRL 1018

Query: 303  QQVMADFLLISVNYAPTGGQLMVSTNLTKDKLGNSVHLVHLEF----------------- 362
            QQV+ADF+L++VN+ P+GGQL VS +L KD+LG SVHL +LE                  
Sbjct: 1019 QQVLADFMLMAVNFTPSGGQLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQM 1078

Query: 363  -----------------RKLVKMMNGDVRYVREAGNSSFIITLELAAAH 378
                             RKLVK+MNGDV+Y+R+AG SSFIIT ELAAA+
Sbjct: 1079 FGTEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAAN 1121

[Close]

BLAST of Lsi08G007580 vs. TAIR 10
Match: AT1G09570.2 (phytochrome A )

HSP 1 Score: 501.5 bits (1290), Expect = 5.9e-142
Identity = 256/409 (62.59%), Postives = 317/409 (77.51%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            +DL ENVVGVCFVA D+T QK VMDKFT+++GDYKAI+QNPNPLIPPIFG DEFGWC+EW
Sbjct: 611  RDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEW 670

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQLNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDP 122
            N AM+KL+G  RE V++KMLLGEVFGTQ      CC+LKNQEAFVNLGIVLNNA++ QDP
Sbjct: 671  NPAMSKLTGLKREEVIDKMLLGEVFGTQ----KSCCRLKNQEAFVNLGIVLNNAVTSQDP 730

Query: 123  EKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERTA 182
            EK +SF F+ R G +VECLLCV+K LDR+G + GVFCFLQLAS ELQQAL +Q+L ERTA
Sbjct: 731  EK-VSFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTA 790

Query: 183  LNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESHD 242
            + RLKAL Y+KRQI+NPL GI+F+RKM++ T+LG EQ+++L  S  CQ+Q+SK+LD+S D
Sbjct: 791  VKRLKALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDS-D 850

Query: 243  LDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLRL 302
            L+ II+G +DLEM EF+L EVL  S SQVMMKS GK ++I NE  EE+MS+TLYGD++RL
Sbjct: 851  LESIIEGCLDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRL 910

Query: 303  QQVMADFLLISVNYAPTGGQLMVSTNLTKDKLGNSVHLVHLEF----------------- 362
            QQV+ADF+L++VN+ P+GGQL VS +L KD+LG SVHL +LE                  
Sbjct: 911  QQVLADFMLMAVNFTPSGGQLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQM 970

Query: 363  -----------------RKLVKMMNGDVRYVREAGNSSFIITLELAAAH 378
                             RKLVK+MNGDV+Y+R+AG SSFIIT ELAAA+
Sbjct: 971  FGTEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAAN 1013

[Close]

BLAST of Lsi08G007580 vs. TAIR 10
Match: AT2G18790.1 (phytochrome B )

HSP 1 Score: 317.8 bits (813), Expect = 1.2e-86
Identity = 171/405 (42.22%), Postives = 245/405 (60.49%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            KD   N+VGVCFV QD+T QK+VMDKF  +QGDYKAIV +PNPLIPPIF  DE   C EW
Sbjct: 754  KDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEW 813

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQLNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDP 122
            N+AM KL+GWSR  V+ KM++GEVFG+       CC LK  +A     IVL+NA+ GQD 
Sbjct: 814  NMAMEKLTGWSRSEVIGKMIVGEVFGS-------CCMLKGPDALTKFMIVLHNAIGGQDT 873

Query: 123  EKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERTA 182
            +K   F F+ RNG FV+ LL  NK +  +G +IG FCFLQ+ S ELQQAL++Q+  +   
Sbjct: 874  DK-FPFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTEC 933

Query: 183  LNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESHD 242
              + K L Y+ + I+NPL G+ F+  +L+ T L  +QKQLL  SV+C++QIS+++ +  D
Sbjct: 934  FTKAKELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDM-D 993

Query: 243  LDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLRL 302
            L+ I  G   L+  EF L  V+   +SQ M   + +G+Q+  +I EEI S  ++GD +R+
Sbjct: 994  LESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRI 1053

Query: 303  QQVMADFLLISVNYAPTGGQLMVSTNLTKDKLGNSVHLVHLEF----------------- 362
            QQ++A+FLL  + YAP+   + +  +    ++ +    +  EF                 
Sbjct: 1054 QQLLAEFLLSIIRYAPSQEWVEIHLSQLSKQMADGFAAIRTEFRMACPGEGLPPELVRDM 1113

Query: 363  -----------------RKLVKMMNGDVRYVREAGNSSFIITLEL 374
                             RK++K+MNG+V+Y+RE+  S F+I LEL
Sbjct: 1114 FHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESERSYFLIILEL 1149

[Close]

BLAST of Lsi08G007580 vs. TAIR 10
Match: AT4G16250.1 (phytochrome D )

HSP 1 Score: 305.8 bits (782), Expect = 4.7e-83
Identity = 172/405 (42.47%), Postives = 237/405 (58.52%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            KD   N+VGVCFV QD+T  K+VMDKF  +QGDYKAI+ +PNPLIPPIF  DE   C EW
Sbjct: 758  KDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEW 817

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQLNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDP 122
            N AM KL+GW R  V+ K+L+ EVFG+        C+LK  +A     IVL+NA+ GQD 
Sbjct: 818  NTAMEKLTGWPRSEVIGKLLVREVFGSY-------CRLKGPDALTKFMIVLHNAIGGQDT 877

Query: 123  EKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERTA 182
            +K   F F+ R G F++ LL +NK +  DG IIG FCFLQ+ S ELQQAL +Q+  E   
Sbjct: 878  DK-FPFPFFDRKGEFIQALLTLNKRVSIDGKIIGAFCFLQIPSPELQQALEVQRRQESEY 937

Query: 183  LNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESHD 242
             +R K L Y+ + I+NPL G+ F+  +L+   L  +QKQLL  SV+C++QISK++ +  D
Sbjct: 938  FSRRKELAYIFQVIKNPLSGLRFTNSLLEDMDLNEDQKQLLETSVSCEKQISKIVGDM-D 997

Query: 243  LDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLRL 302
            +  I  G   LE  EF +  V    +SQVM+  + + +Q+   I  E+ S  +YGD +RL
Sbjct: 998  VKSIDDGSFLLERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRL 1057

Query: 303  QQVMADFLLISVNYAPTGGQLMVSTNLTKDKLGNSVHLVHLEF----------------- 362
            QQV+A+FLL  V YAP  G + +    T +++ +    V LEF                 
Sbjct: 1058 QQVLAEFLLSIVRYAPMEGSVELHLCPTLNQMADGFSAVRLEFRMACAGEGVPPEKVQDM 1117

Query: 363  -----------------RKLVKMMNGDVRYVREAGNSSFIITLEL 374
                             RK++K+MNG V+Y+RE   S F+I +EL
Sbjct: 1118 FHSSRWTSPEGLGLSVCRKILKLMNGGVQYIREFERSYFLIVIEL 1153

[Close]

BLAST of Lsi08G007580 vs. TAIR 10
Match: AT5G35840.1 (phytochrome C )

HSP 1 Score: 265.0 bits (676), Expect = 9.3e-71
Identity = 145/346 (41.91%), Postives = 217/346 (62.72%), Query Frame = 0


Query: 3    KDLGENVVGVCFVAQDITCQKMVMDKFTKLQGDYKAIVQNPNPLIPPIFGLDEFGWCSEW 62
            +D+  NV+GVCF+ QD+T QK + + +++++GDY  I+ +P+ LIPPIF  +E G CSEW
Sbjct: 705  RDMTNNVLGVCFIGQDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEW 764

Query: 63   NLAMTKLSGWSREAVLNKMLLGEVFGTQLNSSSCCCQLKNQEAFVNLGIVLNNAMSGQDP 122
            N AM KLSG  RE V+NK+LLGEVF T  +   CC  LK+ +    L I  N  +SGQ  
Sbjct: 765  NNAMQKLSGIKREEVVNKILLGEVFTT--DDYGCC--LKDHDTLTKLRIGFNAVISGQKN 824

Query: 123  EKNISFGFYARNGMFVECLLCVNKILDRDGGIIGVFCFLQLASQELQQALSIQKLCERTA 182
             + + FGFY R+G F+E LL  NK  D +G + GV CFLQ+ S ELQ AL +Q++ E   
Sbjct: 825  IEKLLFGFYHRDGSFIEALLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAI 884

Query: 183  LNRLKALGYMKRQIQNPLCGIIFSRKMLQQTQLGVEQKQLLHNSVNCQRQISKVLDESHD 242
               L  L Y++ ++++P   I F + +L  + L  +QK+LL  SV C+ Q++KV+ +S D
Sbjct: 885  ACALNKLAYLRHEVKDPEKAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDS-D 944

Query: 243  LDQIIQGFIDLEMVEFSLYEVLVVSISQVMMKSKGKGIQIANEIAEEIMSETLYGDNLRL 302
            ++ I +G+++L+  EF L E L   + QVM  S  + +QI+ +  +E+ S  LYGDNLRL
Sbjct: 945  IEGIEEGYVELDCSEFGLQESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRL 1004

Query: 303  QQVMADFLLISVNYAPTGGQLMVSTNLTK--DKLGNSVHLVHLEFR 347
            QQ++++ LL S+ + P    L VS  +    + +G  +  V LEFR
Sbjct: 1005 QQILSETLLSSIRFTPALRGLCVSFKVIARIEAIGKRMKRVELEFR 1045

The following BLAST results are available for this feature:

BLAST of Lsi08G007580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P06592	8.0e-160	71.67	Phytochrome A OS=Cucurbita pepo OX=3663 GN=PHYA PE=2 SV=1	[more]
B4YB07	8.0e-144	64.08	Phytochrome A-2 OS=Glycine max OX=3847 GN=PHYA2 PE=1 SV=1	[more]
P42500	2.2e-141	63.11	Phytochrome A OS=Glycine max OX=3847 GN=PHYA PE=2 SV=1	[more]
P14712	8.3e-141	62.59	Phytochrome A OS=Arabidopsis thaliana OX=3702 GN=PHYA PE=1 SV=2	[more]
P93673	8.3e-141	62.38	Phytochrome type A OS=Lathyrus sativus OX=3860 GN=PHYA PE=3 SV=1	[more]

BLAST of Lsi08G007580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHC2	7.4e-185	82.37	Phytochrome OS=Cucumis sativus OX=3659 GN=Csa_6G403050 PE=3 SV=1	[more]
A0A1S3CMF0	9.7e-185	81.93	Phytochrome OS=Cucumis melo OX=3656 GN=LOC103502594 PE=3 SV=1	[more]
A0A6J1DYB9	4.5e-166	74.27	Phytochrome OS=Momordica charantia OX=3673 GN=LOC111024646 PE=3 SV=1	[more]
A0A6J1GJ14	4.5e-166	75.55	Phytochrome OS=Cucurbita moschata OX=3662 GN=LOC111454645 PE=3 SV=1	[more]
A0A6J1KP52	1.5e-164	74.82	Phytochrome OS=Cucurbita maxima OX=3661 GN=LOC111495998 PE=3 SV=1	[more]

BLAST of Lsi08G007580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884425.1	1.5e-195	86.20	phytochrome A-like [Benincasa hispida]	[more]
XP_031742642.1	1.5e-184	82.37	phytochrome A [Cucumis sativus] >KAE8647286.1 hypothetical protein Csa_004164 [C...	[more]
XP_008464788.1	2.0e-184	81.93	PREDICTED: phytochrome A-like [Cucumis melo] >XP_008464789.1 PREDICTED: phytochr...	[more]
XP_022158074.1	9.4e-166	74.27	phytochrome A [Momordica charantia]	[more]
XP_022951908.1	9.4e-166	75.55	phytochrome A-like [Cucurbita moschata]	[more]

BLAST of Lsi08G007580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09570.1	5.9e-142	62.59	phytochrome A	[more]
AT1G09570.2	5.9e-142	62.59	phytochrome A	[more]
AT2G18790.1	1.2e-86	42.22	phytochrome B	[more]
AT4G16250.1	4.7e-83	42.47	phytochrome D	[more]
AT5G35840.1	9.3e-71	41.91	phytochrome C	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013767	PAS fold	PFAM	PF00989	PAS	coord: 35..162 e-value: 3.4E-20 score: 72.1
IPR036890	Histidine kinase/HSP90-like ATPase superfamily	GENE3D	3.30.565.10		coord: 228..346 e-value: 8.2E-6 score: 27.7
None	No IPR available	GENE3D	3.30.450.20	PAS domain	coord: 48..169 e-value: 4.5E-5 score: 25.3
None	No IPR available	PANTHER	PTHR43719	TWO-COMPONENT HISTIDINE KINASE	coord: 3..345
None	No IPR available	PANTHER	PTHR43719:SF46	PHYTOCHROME A	coord: 3..345
IPR005467	Histidine kinase domain	PROSITE	PS50109	HIS_KIN	coord: 191..334 score: 18.78982
IPR000014	PAS domain	PROSITE	PS50112	PAS	coord: 35..87 score: 11.358851
IPR000014	PAS domain	CDD	cd00130	PAS	coord: 46..162 e-value: 0.00269926 score: 35.3016
IPR035965	PAS domain superfamily	SUPERFAMILY	55785	PYP-like sensor domain (PAS domain)	coord: 49..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G007580.1	Lsi08G007580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009584	detection of visible light
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0017006	protein-tetrapyrrole linkage
biological_process	GO:0009585	red, far-red light phototransduction
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000155	phosphorelay sensor kinase activity
molecular_function	GO:0009881	photoreceptor activity
molecular_function	GO:0042803	protein homodimerization activity