Lsi08G007210 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi08G007210
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionubiquitin-like protein 5
Locationchr08: 15573914 .. 15578362 (-)
RNA-Seq ExpressionLsi08G007210
SyntenyLsi08G007210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAGGCGGCGGAAAATAAATAATAAAAAACGAACGAGCGCAAAAATTTTCTCTTTAATTTTGCATTTTGCTCCGTTGAACTCTGAGACGACCTAGGGTTTTGCTTTTCTTGGGAGAGAGAAGAAAGAAGAAGATGATCGAGGTGGTGCTGAATGATCGGTTGGGGAAGAAGGTGAGAGTGAAGTGCAACGACGACGACACCATCGGCGACTTGAAGAAGCTCGTGGCTGCCCAGACTGGGACTAGAGCTGAGAAGATTCGGATTCAGAAATGGTACAATATCTACAAGGATCATATTACTCTCAAGGATTACGAAATCCACGACGGCATGGGCCTCGAACTCTACTACAATTAGGTTATTTTCTCATCACTCTTGGATATTTATCTGTTTTTCTTATGGGATGAATTTTGGAGGCCCTGGTTGATTTTTCTGGATTTATGATGGAATTCTCTTACGTATGATGTTTTCTTTTCATCCTGTTCACTATGGCCACTCCCTAGAATTTTGTGTAGAAGATTATGATTTTTGAGATTTTATTCTTCTAGCTTTACTCGGTCCTAATATTTATGATTCCATCCATGAGTTTTGGACTAGGTAAAGAGAGAAAAGATGGTCATTGTTTGCAAGTTGATCTTTTTTGTTAGATTTTAGGGCGACGTTGGCGGTAATTTAACTCTGGTTGTGTAAAGTAGAGATAGGACAATAATAGACAACATGGGCATTATTTATTTCTTTACTTTTGTTATAATTTGTGGCTTACGCTAGAGAGTTTACTATCCATCTTGTAACTGTTAACTGTTAAGGTAGATGACTGCTACATGTTAATTTAAATACTGATGATGACAGAGTGTATAGTAGAAAGTACACTTTGAATGTGAAAGTACATATAATGAATCTGGTGGAAGTATTGATTTGTGATTGAGTAGGCATGTTTTAGCTGTTGTAATTTAGATATAAAAGAGGTTGGTAATGGTGAAAATAAAGGTGCCATGACTCAGATAAATTTGGAGAATAGTTCGTTATAGGTGACTTAGGAAGTCCTTCGTTCCAGTCGGAATGCTGATCACTTTGCTAAAGCAAGAAACAATTCTCGAAATAATTTATTGTATTGAGCTCGTCCACCTATGGGGGTGTTGCTGGATGTAAGTTGCAATATTTCTAATCTTATCCCACTAGTTCTTCCTTAATGATCTTTGATCTCTTAAAAATGAAAAACATGGAGTCATGGACGACTAGTGCATCTCGTATAACCATGTTGAACCCACCATACAAGTCATTCATCCGCTGTGATCAATTAATCTAAGGGATCTTGGGGAACTGTCTTTTACCTGATAAAGCTTTCTTTATAGCCTTGTATCATTCGAACGAAATTACTTTACCTTCTTATCTTTTCTTATGTTGTAGTTATTAGTAAGCCTACTCCTTATCGACGTAAACATCCATCGATCAGGCCATTAGAAATGTAATAATGAATCATCCCATCTTTGATCTCTCGGGGTTTTTCCCTCTACCATAAGGCCATTTAAAAACATTGAAAAAAATGCAGTTTAATATCCAATTATGCCGCCTTTGCCTAAAGCCATTTTCCTTGGGAACCACATCAAGGAAATGCCAGAAAGTAGGAAAAACTTTCTGTCATATGGACCAGATGACAATTATCTGTTAGCCATGTATGAGCTATGTCAGCAGGTAGAGTTTGCTGGCAACTATTTTGTGCCAAATAGAAATGGGTGGGTGAGGGGAGTTCTTCTGAAGGCTTCAAAACACTGATTTATCAATAGAATTTGCTATTCGTTACTTTCTCCTGCTCTCTGAATTGACGATAACTTCACCCTTTTAAATGGCTAAACTGGGAGTTGCCGGGTTTGCAACAAATAGAGGAATCCGCATCAAAATTTAATTTTTAAATCTCTTCCAAAAAGAATCGAAACTCCCGAAACCAGTGGGACACTAGGACTGGTCCTCTTCAACTCTACACAGAAAGAAAATTCCTTAAAGAGGTGAGGCTTTTATTTTGGACTCTTCATTTAGGGAGCCTTACTCCCAACTCCTAAAGTGGCCAGGTGTATTTTCTTGTAGTTAAGGAGAGGCAACTTTAATATGTTCCTCAATTACCCACTTGAGCCTAGGTCAACTAATTAAGTCATATACCCTCGGCCAACAGGTCAGAGGTTCGAATTCACTGAGCTTTGTGAAAAAATTGTTGATTGAGGAATATATATATATATATATATATATATATATAATGATAAAATTCGTCAAATTATCAATATAATGATAATTTATTGCTTGTATCTTAGCTTAAAGTTCTACGCATGGTTGCTTTCCATTTTGAAAAAGCTACATTTTCCATGTTCATGAATAGGAATAAGCTGACTTTGTCTCTTTTTAATTCAGTTAATGCAGGCACGGAAAGCCATATGCTGTGCTTTGCTACCACCCTCTTAGCTCAATGTTGTCGTATGGCGCTGCCTGTGTAATTTGTAACATAAGACGCATATATTGATAACTGTTTCAGAATAAAACTCGGTTTGGGACTTCAATGTAATACTAATACATACACAATCAAACTGCTTGTTTCGGTGATATTATATGTTGTGGTAACTTCAATTAACTTTATGCTTTAAGGAATCGTTTAGTTTTGTATTTTCATTGATTTTGAATTTAAGAAGTGGATTTCAAATTCAAAATCTGAAAAACTATATGTGATATTACATGCATACATATGACAGTGGAGCAAGCTGAATTATCATTCTTGATCCTATGAATTTACTTTATTTTCATTGTTACCCTATTTTTTATTTGAAGATTTAGGATTAAGGTTATAGAATCATTGTTTGAAGATTCGGATTCTTTTGTCAGTAAATAATTGATTTTTAGTATATTCGTTAATGATATAATAAAAATTGATATATATGTGTAGGGTGGAGAATATATTCTCCTAACATTCTCAGGAAGTGAATAAAGGTTTTTCTCTCAGCCTTCAACTTTAACTACCTTTTTAAATGTGAAGACTGTAACTTGTTAACTCTATTGCTGTTGTCTTAGTAAGGTTGAATATTAATTTTACAAGTTGTCAATTTGAGATTTTAAATGATTGTCAAGTATTACTACCAGGAAGAACCAAGCTGGGCCTATAAGATTTAGACTTTATTTTTATTTAGTTCTATAGTTTTGGAGTCTTGAGGAATGGCATTAGATGCCATTCCATTTGTATGCATTATCTTGTTCTTAGTGGCATTAAAAGAAGGCTGATGAGACATGATTATATTTATATGGTTAATTTTATTTGATAGGATCATATTAGTTAGGTTAGATTATAAAAAAATGCATCTGAATTTTGCTATTTGTTTAAAAATATTTTTATTCTTTTAAAAGTTGCAATATTACTCTTGATGTTCCATAAATGTTTGAGTAGAAACTTTCAATGAAATTTGAAACCTGGATTGAATTTTCACACTGTTCTAAGTTATTTAACATAGTTCCAAAAGACTCTCTACTCTAAGGTAATTATGAAATGTTTTGGAAGCTCTAGTGAGAGTATTTTTTAAAACAAATGAGTTTAGGTGGTTTTAATTCTTAAAACAAAAAAAGAACATCTAAAAAGTAATTTAAAGATTACTCGAACTTCGGTCAATAGTGTCAAGAAAAGTATAGCATATTGTATAAAAATATATATATATATATATAAAAAAAAAAAACCACATACACTTTCACCCCGATAATAATGTTATAAATAAAAGTAGGTTTATACTTTTCATACATCAAGTATATTCTACCAGTCAATATGAGCGCAATTCATATCTTAAGACTATTTATTTAAGTTGGAAGTTTCAATTCTTTTAGTCCATATTTGCTTTACTAAAAAATGTGTGTTAAAAAAAAAGGAATTTAGAAATCAACTATGATTCTAAAGAAATTTACCCTTTTTAAAAGGGTGAAATATATTGTTGTGAATGGAAGTAGTAGAAAAAGAACAATAAGAAAACAAAATATAAAAAGAAAGCTCTATTTTTAAAGACATATATATAGTTAGTTGTAGACATTTTTATGAGTGAAGATGCAATTATTTTTGTATATATTAATCCTACTGATATAATGTTTTGATATAAAGTCTAAACATTTATCTTTTTAAAAATATCTTATTATATAATAATGAAATACAATCCTTCTTGGATTATTAAATATTATATATATTTTTTCCACGAATGTCTCATGGTATTGTTTAATTTGAAAAATGAAGGGGTTTGTGGAGGCAACGAGGAATCAGATCAGAGAGAGCAATATTTAATGTTGATATTGAGCTGTTTTTAGCAATCGTCAAAGTTGGAAGAAACCATGGCGATGAACAAGGTAATAAATGTCTGTTTGTTTGACCAAATTTGTTGTTGACTTTACAGCTAAATAACACCATCTCAAACTAATGCCAAGTTGGTCCAATGTTTTTTC

mRNA sequence

CAAGGCGGCGGAAAATAAATAATAAAAAACGAACGAGCGCAAAAATTTTCTCTTTAATTTTGCATTTTGCTCCGTTGAACTCTGAGACGACCTAGGGTTTTGCTTTTCTTGGGAGAGAGAAGAAAGAAGAAGATGATCGAGGTGGTGCTGAATGATCGGTTGGGGAAGAAGGTGAGAGTGAAGTGCAACGACGACGACACCATCGGCGACTTGAAGAAGCTCGTGGCTGCCCAGACTGGGACTAGAGCTGAGAAGATTCGGATTCAGAAATGGTACAATATCTACAAGGATCATATTACTCTCAAGGATTACGAAATCCACGACGGCATGGGCCTCGAACTCTACTACAATTAGTTAATGCAGGCACGGAAAGCCATATGCTGTGCTTTGCTACCACCCTCTTAGCTCAATGTTGTCGTATGGCGCTGCCTGTGTAATTTGTAACATAAGACGCATATATTGATAACTGTTTCAGAATAAAACTCGGTTTGGGACTTCAATGTAATACTAATACATACACAATCAAACTGCTTGTTTCGGTGATATTATATGTTGTGGTAACTTCAATTAACTTTATGCTTTAAGGAATCGTTTAGTTTTGTATTTTCATTGATTTTGAATTTAAGAAGTGGATTTCAAATTCAAAATCTGAAAAACTATATGTGATATTACATGCATACATATGACAGTGGAGCAAGCTGAATTATCATTCTTGATCCTATGAATTTACTTTATTTTCATTGTTACCCTATTTTTTATTTGAAGATTTAGGATTAAGGTTATAGAATCATTGTTTGAAGATTCGGATTCTTTTGTCAGTAAATAATTGATTTTTAGTATATTCGTTAATGATATAATAAAAATTGATATATATGTGTAGGGTGGAGAATATATTCTCCTAACATTCTCAGGAAGTGAATAAAGGGGTTTGTGGAGGCAACGAGGAATCAGATCAGAGAGAGCAATATTTAATGTTGATATTGAGCTGTTTTTAGCAATCGTCAAAGTTGGAAGAAACCATGGCGATGAACAAGGTAATAAATGTCTGTTTGTTTGACCAAATTTGTTGTTGACTTTACAGCTAAATAACACCATCTCAAACTAATGCCAAGTTGGTCCAATGTTTTTTC

Coding sequence (CDS)

ATGATCGAGGTGGTGCTGAATGATCGGTTGGGGAAGAAGGTGAGAGTGAAGTGCAACGACGACGACACCATCGGCGACTTGAAGAAGCTCGTGGCTGCCCAGACTGGGACTAGAGCTGAGAAGATTCGGATTCAGAAATGGTACAATATCTACAAGGATCATATTACTCTCAAGGATTACGAAATCCACGACGGCATGGGCCTCGAACTCTACTACAATTAG

Protein sequence

MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Homology
[Close]
BLAST of Lsi08G007210 vs. ExPASy Swiss-Prot
Match: Q9FGZ9 (Ubiquitin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=UBL5 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.1e-36
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Lsi08G007210 vs. ExPASy Swiss-Prot
Match: Q3T0Z3 (Ubiquitin-like protein 5 OS=Bos taurus OX=9913 GN=UBL5 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.0e-28
Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EIHDGMGLELYY 73
          EIHDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]
BLAST of Lsi08G007210 vs. ExPASy Swiss-Prot
Match: Q9BZL1 (Ubiquitin-like protein 5 OS=Homo sapiens OX=9606 GN=UBL5 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.0e-28
Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EIHDGMGLELYY 73
          EIHDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]
BLAST of Lsi08G007210 vs. ExPASy Swiss-Prot
Match: Q6EGX7 (Ubiquitin-like protein 5 OS=Mesocricetus auratus OX=10036 GN=UBL5 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.0e-28
Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EIHDGMGLELYY 73
          EIHDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]
BLAST of Lsi08G007210 vs. ExPASy Swiss-Prot
Match: Q9EPV8 (Ubiquitin-like protein 5 OS=Mus musculus OX=10090 GN=Ubl5 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.0e-28
Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EIHDGMGLELYY 73
          EIHDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]
BLAST of Lsi08G007210 vs. ExPASy TrEMBL
Match: A0A384KQX3 ((thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At5g40140 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.9e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Lsi08G007210 vs. ExPASy TrEMBL
Match: Q570V8 (Ubiquitin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g42300 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.9e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Lsi08G007210 vs. ExPASy TrEMBL
Match: A0A200R5R7 (Ubiquitin domain OS=Macleaya cordata OX=56857 GN=BVC80_1835g482 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.9e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Lsi08G007210 vs. ExPASy TrEMBL
Match: A9PD58 (Ubiquitin-like domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G039100 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.7e-34
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          M+EVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MLEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Lsi08G007210 vs. ExPASy TrEMBL
Match: A0A6N2M145 (Ubiquitin-like domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS264022 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.7e-34
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          M+EVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MLEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Lsi08G007210 vs. NCBI nr
Match: NP_199045.1 (ubiquitin-like protein 5 [Arabidopsis thaliana] >XP_042491163.1 ubiquitin-like protein 5 [Macadamia integrifolia] >XP_042518368.1 ubiquitin-like protein 5 [Macadamia integrifolia] >XP_042518369.1 ubiquitin-like protein 5 [Macadamia integrifolia] >XP_042518370.1 ubiquitin-like protein 5 [Macadamia integrifolia] >Q9FGZ9.1 RecName: Full=Ubiquitin-like protein 5 [Arabidopsis thaliana] >KAG7604621.1 Ubiquitin domain [Arabidopsis thaliana x Arabidopsis arenosa] >KAG7611553.1 Ubiquitin domain [Arabidopsis suecica] >OVA18069.1 Ubiquitin domain [Macleaya cordata] >AAK48954.1 ubiquitin-like protein [Arabidopsis thaliana] >AAL66949.1 ubiquitin-like protein [Arabidopsis thaliana])

HSP 1 Score: 153.3 bits (386), Expect = 8.1e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Lsi08G007210 vs. NCBI nr
Match: XP_002312015.1 (ubiquitin-like protein 5 [Populus trichocarpa] >XP_034919348.1 ubiquitin-like protein 5 [Populus alba] >XP_034919349.1 ubiquitin-like protein 5 [Populus alba] >ABK94311.1 unknown [Populus trichocarpa] >PNT22577.1 hypothetical protein POPTR_008G039100 [Populus trichocarpa] >PNT22578.1 hypothetical protein POPTR_008G039100 [Populus trichocarpa])

HSP 1 Score: 152.5 bits (384), Expect = 1.4e-33
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          M+EVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MLEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Lsi08G007210 vs. NCBI nr
Match: KAC9631537.1 (hypothetical protein E3N88_45505 [Mikania micrantha] >KAC9631539.1 hypothetical protein E3N88_45507 [Mikania micrantha] >KAD7480016.1 hypothetical protein E3N88_03152 [Mikania micrantha])

HSP 1 Score: 152.1 bits (383), Expect = 1.8e-33
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1   MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
           MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLKDY
Sbjct: 50  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDY 109

Query: 61  EIHDGMGLELYYN 74
           EIHDGMGLELYYN
Sbjct: 110 EIHDGMGLELYYN 122

[Close]
BLAST of Lsi08G007210 vs. NCBI nr
Match: XP_022016121.2 (uncharacterized protein LOC110915698 [Helianthus annuus])

HSP 1 Score: 152.1 bits (383), Expect = 1.8e-33
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1   MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
           MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLKDY
Sbjct: 97  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDY 156

Query: 61  EIHDGMGLELYYN 74
           EIHDGMGLELYYN
Sbjct: 157 EIHDGMGLELYYN 169

[Close]
BLAST of Lsi08G007210 vs. NCBI nr
Match: XP_017249268.1 (PREDICTED: ubiquitin-like protein 5 [Daucus carota subsp. sativus] >XP_017249269.1 PREDICTED: ubiquitin-like protein 5 [Daucus carota subsp. sativus] >XP_017249270.1 PREDICTED: ubiquitin-like protein 5 [Daucus carota subsp. sativus] >KZM95859.1 hypothetical protein DCAR_019101 [Daucus carota subsp. sativus])

HSP 1 Score: 152.1 bits (383), Expect = 1.8e-33
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Lsi08G007210 vs. TAIR 10
Match: AT5G42300.1 (ubiquitin-like protein 5 )

HSP 1 Score: 153.3 bits (386), Expect = 7.5e-38
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Lsi08G007210 vs. TAIR 10
Match: AT3G45180.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 146.0 bits (367), Expect = 1.2e-35
Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCN++DTIGDLKKLVAAQTGTR EKIRIQKWYNIYKDHI LKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEEDTIGDLKKLVAAQTGTRPEKIRIQKWYNIYKDHIPLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

The following BLAST results are available for this feature:
BLAST of Lsi08G007210 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FGZ91.1e-36100.00Ubiquitin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=UBL5 PE=3 SV=1[more]
Q3T0Z34.0e-2880.56Ubiquitin-like protein 5 OS=Bos taurus OX=9913 GN=UBL5 PE=3 SV=1[more]
Q9BZL14.0e-2880.56Ubiquitin-like protein 5 OS=Homo sapiens OX=9606 GN=UBL5 PE=1 SV=1[more]
Q6EGX74.0e-2880.56Ubiquitin-like protein 5 OS=Mesocricetus auratus OX=10036 GN=UBL5 PE=3 SV=1[more]
Q9EPV84.0e-2880.56Ubiquitin-like protein 5 OS=Mus musculus OX=10090 GN=Ubl5 PE=1 SV=1[more]
BLAST of Lsi08G007210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A384KQX33.9e-34100.00(thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At5g... [more]
Q570V83.9e-34100.00Ubiquitin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g42300 PE=2 SV=1[more]
A0A200R5R73.9e-34100.00Ubiquitin domain OS=Macleaya cordata OX=56857 GN=BVC80_1835g482 PE=4 SV=1[more]
A9PD586.7e-3498.63Ubiquitin-like domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR... [more]
A0A6N2M1456.7e-3498.63Ubiquitin-like domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOC... [more]
BLAST of Lsi08G007210 vs. NCBI nr
Match NameE-valueIdentityDescription
NP_199045.18.1e-34100.00ubiquitin-like protein 5 [Arabidopsis thaliana] >XP_042491163.1 ubiquitin-like p... [more]
XP_002312015.11.4e-3398.63ubiquitin-like protein 5 [Populus trichocarpa] >XP_034919348.1 ubiquitin-like pr... [more]
KAC9631537.11.8e-3398.63hypothetical protein E3N88_45505 [Mikania micrantha] >KAC9631539.1 hypothetical ... [more]
XP_022016121.21.8e-3398.63uncharacterized protein LOC110915698 [Helianthus annuus][more]
XP_017249268.11.8e-3398.63PREDICTED: ubiquitin-like protein 5 [Daucus carota subsp. sativus] >XP_017249269... [more]
BLAST of Lsi08G007210 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G42300.17.5e-38100.00ubiquitin-like protein 5 [more]
AT3G45180.11.2e-3594.52Ubiquitin-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 1..73
e-value: 1.2E-29
score: 104.0
NoneNo IPR availablePANTHERPTHR13042:SF13UBIQUITIN-LIKE PROTEIN 5coord: 1..73
NoneNo IPR availableCDDcd01791Ubl_UBL5coord: 1..71
e-value: 5.81887E-47
score: 141.687
IPR000626Ubiquitin-like domainPFAMPF00240ubiquitincoord: 11..70
e-value: 9.3E-7
score: 28.5
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 2..73
score: 10.113883
IPR039732Ubiquitin-like modifier Hub1/Ubl5PANTHERPTHR13042UBIQUITIN-LIKE PROTEIN 5coord: 1..73
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G007210.1Lsi08G007210.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006464 cellular protein modification process
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0031386 protein tag