Lsi08G006640 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G006640
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Ribosomal protein S14
Location	chr08: 14970164 .. 14970469 (+)
RNA-Seq Expression	Lsi08G006640
Synteny	Lsi08G006640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGGGACAAGCGAAACATTCTTGATCATTTTCGCCGAGAGCTTGCTGCAAAGTTTGAGTTGAAGCGGAAGCTTTACAAAGCCATTTGCAACGATCCGAGTCTTCCTAACGATGTGCGTGAGGAGCAGCGTTATAAGCTGTCGAAATTGCCAAGAAATAGTTCGTTCACTCGACTGAGGAATCGCTGCATTTTCACCGGTCGACCTAGGTCTGTCTACCAGCTTTTCCGTGTTTCTCGTATCGTTTTCCGCGATCTGGCGACCAAAGGTCTTATAATGGGTGTCAAGAAATCTTCTTGGTAG

mRNA sequence

ATGTCGGGGGACAAGCGAAACATTCTTGATCATTTTCGCCGAGAGCTTGCTGCAAAGTTTGAGTTGAAGCGGAAGCTTTACAAAGCCATTTGCAACGATCCGAGTCTTCCTAACGATGTGCGTGAGGAGCAGCGTTATAAGCTGTCGAAATTGCCAAGAAATAGTTCGTTCACTCGACTGAGGAATCGCTGCATTTTCACCGGTCGACCTAGGTCTGTCTACCAGCTTTTCCGTGTTTCTCGTATCGTTTTCCGCGATCTGGCGACCAAAGGTCTTATAATGGGTGTCAAGAAATCTTCTTGGTAG

Coding sequence (CDS)

ATGTCGGGGGACAAGCGAAACATTCTTGATCATTTTCGCCGAGAGCTTGCTGCAAAGTTTGAGTTGAAGCGGAAGCTTTACAAAGCCATTTGCAACGATCCGAGTCTTCCTAACGATGTGCGTGAGGAGCAGCGTTATAAGCTGTCGAAATTGCCAAGAAATAGTTCGTTCACTCGACTGAGGAATCGCTGCATTTTCACCGGTCGACCTAGGTCTGTCTACCAGCTTTTCCGTGTTTCTCGTATCGTTTTCCGCGATCTGGCGACCAAAGGTCTTATAATGGGTGTCAAGAAATCTTCTTGGTAG

Protein sequence

MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW

Homology

[Close]

BLAST of Lsi08G006640 vs. ExPASy Swiss-Prot
Match: P14875 (Ribosomal protein S14, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPS14 PE=3 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 3.0e-37
Identity = 72/98 (73.47%), Postives = 87/98 (88.78%), Query Frame = 0


Query: 4   DKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNR 63
           +KRNI DH RR LA K+EL+RKLYKA CNDP+LP+D+R++ RYKLSKLPRNSSF R+RNR
Sbjct: 2   EKRNIRDHKRRLLATKYELRRKLYKAFCNDPALPSDMRDKHRYKLSKLPRNSSFARVRNR 61

Query: 64  CIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW 102
           CI TGRPRSVY+ FR+SRIVFR LA++G +MG+KKSSW
Sbjct: 62  CISTGRPRSVYEFFRISRIVFRGLASRGPLMGIKKSSW 99

[Close]

BLAST of Lsi08G006640 vs. ExPASy Swiss-Prot
Match: P05716 (Ribosomal protein S14, mitochondrial OS=Vicia faba OX=3906 GN=RPS14 PE=3 SV=2)

HSP 1 Score: 152.5 bits (384), Expect = 2.5e-36
Identity = 72/98 (73.47%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 4   DKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNR 63
           +KRNI DH RR LAAK+EL+RKLYKA C D  LP+D+R++ RYKLSKLPRNSSF R+RNR
Sbjct: 3   EKRNIRDHKRRLLAAKYELRRKLYKAFCKDSDLPSDMRDKLRYKLSKLPRNSSFARVRNR 62

Query: 64  CIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW 102
           CI TGRPRSVY+LFR+SRIVFR LA++G +MG+KKSSW
Sbjct: 63  CISTGRPRSVYELFRISRIVFRSLASRGPLMGIKKSSW 100

[Close]

BLAST of Lsi08G006640 vs. ExPASy Swiss-Prot
Match: P49387 (Ribosomal protein S14, mitochondrial OS=Brassica napus OX=3708 GN=RPS14 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.8e-34
Identity = 69/98 (70.41%), Postives = 83/98 (84.69%), Query Frame = 0


Query: 4   DKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNR 63
           +K+N  DH RR LAAKFEL+RKLYKA C DP LP+D+R++ RYKLSKLPRNSSF R+RNR
Sbjct: 3   EKQNSRDHKRRLLAAKFELRRKLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNR 62

Query: 64  CIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW 102
           CI TGRPRSV + FR+ RIVFR LA++G +MG+KKSSW
Sbjct: 63  CISTGRPRSVSEFFRIYRIVFRGLASRGSLMGIKKSSW 100

[Close]

BLAST of Lsi08G006640 vs. ExPASy Swiss-Prot
Match: P26873 (Ribosomal protein S14, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS14 PE=3 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 2.4e-31
Identity = 66/94 (70.21%), Postives = 78/94 (82.98%), Query Frame = 0


Query: 8   ILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFT 67
           I DH RR L AK+ELKR  YKAIC D +LPN +R E  +KLSKLPRNSS TR+RNRCIFT
Sbjct: 6   IRDHKRRLLVAKYELKRMHYKAICQDRNLPNKIRYEYFFKLSKLPRNSSKTRVRNRCIFT 65

Query: 68  GRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW 102
           GRPRSVY+LFR+SRIVFR+LA+KG ++G+ KS W
Sbjct: 66  GRPRSVYKLFRISRIVFRELASKGSLIGINKSCW 99

[Close]

BLAST of Lsi08G006640 vs. ExPASy Swiss-Prot
Match: P46752 (Ribosomal protein S14, mitochondrial OS=Prototheca wickerhamii OX=3111 GN=RPS14 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.5e-20
Identity = 52/89 (58.43%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 13  RRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPRS 72
           RR+L  K+E KR LYKA+ +D +L  D+R     KL+KLPRNSS  R++NRCI TGR  S
Sbjct: 11  RRKLYKKYESKRLLYKALISDCNLNQDLRFILTQKLNKLPRNSSQVRVKNRCILTGRGHS 70

Query: 73  VYQLFRVSRIVFRDLATKGLIMGVKKSSW 102
           VY+  R+SRI FRDLA +GLI G  KSSW
Sbjct: 71  VYKFCRISRIKFRDLANQGLIQGCVKSSW 99

[Close]

BLAST of Lsi08G006640 vs. ExPASy TrEMBL
Match: A0A6J1C264 (uncharacterized protein LOC111006733 OS=Momordica charantia OX=3673 GN=LOC111006733 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.6e-48
Identity = 96/101 (95.05%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRL 60
           MSGDKRNILDH+RR+LAAKFELKRKLYKA+CNDPSLPNDVREEQRYKLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEQRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW 102
           RNRCIFTGRPR+VYQLFRVSRIVFRDLA+KGLIMGVKKSSW
Sbjct: 61  RNRCIFTGRPRAVYQLFRVSRIVFRDLASKGLIMGVKKSSW 101

[Close]

BLAST of Lsi08G006640 vs. ExPASy TrEMBL
Match: A0A6J1FKA4 (uncharacterized protein LOC111444996 OS=Cucurbita moschata OX=3662 GN=LOC111444996 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 6.2e-46
Identity = 93/101 (92.08%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 1   MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRL 60
           M+ DKRNILDH+RR+LAAKFELKRKLYKA+CNDPSLPNDVREE RYKLSKLPRNSSFTRL
Sbjct: 1   MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW 102
           RNRCIFTGRPR VYQLFRVSRIVFRDLA+KGLIMGVKKSSW
Sbjct: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLIMGVKKSSW 101

[Close]

BLAST of Lsi08G006640 vs. ExPASy TrEMBL
Match: A0A5D3CKB3 (Ribosomal protein S14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00590 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 6.4e-43
Identity = 87/101 (86.14%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRL 60
           MSGDKRNILD++RR+LAAKFE+KR L+KAICNDPSLP DVREE RYKLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW 102
           RNRCIFTGRPR VYQLFR+SRIVFR+LA KGL+MGVKK+SW
Sbjct: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 101

[Close]

BLAST of Lsi08G006640 vs. ExPASy TrEMBL
Match: A0A1S4E169 (ribosomal protein S14, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496488 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 6.4e-43
Identity = 87/101 (86.14%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRL 60
           MSGDKRNILD++RR+LAAKFE+KR L+KAICNDPSLP DVREE RYKLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW 102
           RNRCIFTGRPR VYQLFR+SRIVFR+LA KGL+MGVKK+SW
Sbjct: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 101

[Close]

BLAST of Lsi08G006640 vs. ExPASy TrEMBL
Match: A0A0A0LSR8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G386130 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.1e-42
Identity = 86/101 (85.15%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRL 60
           MSGDKRNILD++RR+LAAKFELKR L+KAICNDPSLP D+REE R KLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDNYRRQLAAKFELKRNLFKAICNDPSLPKDIREEHRNKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW 102
           RNRCIFTGRPR VYQLFR+SRIVFR+LA KGL+MGVKK+SW
Sbjct: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 101

[Close]

BLAST of Lsi08G006640 vs. NCBI nr
Match: XP_022134507.1 (uncharacterized protein LOC111006733 [Momordica charantia] >XP_022134508.1 uncharacterized protein LOC111006733 [Momordica charantia])

HSP 1 Score: 199.5 bits (506), Expect = 1.4e-47
Identity = 96/101 (95.05%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRL 60
           MSGDKRNILDH+RR+LAAKFELKRKLYKA+CNDPSLPNDVREEQRYKLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEQRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW 102
           RNRCIFTGRPR+VYQLFRVSRIVFRDLA+KGLIMGVKKSSW
Sbjct: 61  RNRCIFTGRPRAVYQLFRVSRIVFRDLASKGLIMGVKKSSW 101

[Close]

BLAST of Lsi08G006640 vs. NCBI nr
Match: XP_022938933.1 (uncharacterized protein LOC111444996 [Cucurbita moschata] >XP_022938934.1 uncharacterized protein LOC111444996 [Cucurbita moschata] >KAG7016311.1 Ribosomal protein S14, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 193.0 bits (489), Expect = 1.3e-45
Identity = 93/101 (92.08%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 1   MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRL 60
           M+ DKRNILDH+RR+LAAKFELKRKLYKA+CNDPSLPNDVREE RYKLSKLPRNSSFTRL
Sbjct: 1   MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW 102
           RNRCIFTGRPR VYQLFRVSRIVFRDLA+KGLIMGVKKSSW
Sbjct: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLIMGVKKSSW 101

[Close]

BLAST of Lsi08G006640 vs. NCBI nr
Match: XP_023550870.1 (uncharacterized protein LOC111808878 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192.6 bits (488), Expect = 1.7e-45
Identity = 92/101 (91.09%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 1   MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRL 60
           M+ DKRNILDH+RR+LAAKFELKRKLYKA+CNDPSLPNDVREE RYKLSKLPRNSSFTRL
Sbjct: 1   MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW 102
           RNRCIFTGRPR VYQLFRVSRIVFRDLA+KGL+MGVKKSSW
Sbjct: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 101

[Close]

BLAST of Lsi08G006640 vs. NCBI nr
Match: XP_038884392.1 (ribosomal protein S14, mitochondrial [Benincasa hispida])

HSP 1 Score: 192.6 bits (488), Expect = 1.7e-45
Identity = 93/101 (92.08%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 1   MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRL 60
           MS DKRNILDH+RR+LAAKFE+KRKLYKAICNDPSLPNDVRE+ RYKLSKLPRNSSFTRL
Sbjct: 1   MSEDKRNILDHYRRQLAAKFEVKRKLYKAICNDPSLPNDVREDHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW 102
           RNRCIFTGRPR+VYQLFRVSRIVFRDLA+KGLIMGVKKSSW
Sbjct: 61  RNRCIFTGRPRAVYQLFRVSRIVFRDLASKGLIMGVKKSSW 101

[Close]

BLAST of Lsi08G006640 vs. NCBI nr
Match: KAG7032953.1 (Ribosomal protein S14, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191.4 bits (485), Expect = 3.7e-45
Identity = 92/101 (91.09%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 1   MSGDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRL 60
           M+ DKRNILDH+RR+LAAKFELKRKL+KA+CNDPSLPNDVREE RYKLSKLPRNSSFTRL
Sbjct: 1   MTEDKRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW 102
           RNRCIFTGRPR VYQLFRVSRIVFRDLA+KGLIMGVKKSSW
Sbjct: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLIMGVKKSSW 101

[Close]

BLAST of Lsi08G006640 vs. TAIR 10
Match: AT2G34520.1 (mitochondrial ribosomal protein S14 )

HSP 1 Score: 148.3 bits (373), Expect = 3.4e-36
Identity = 70/99 (70.71%), Postives = 84/99 (84.85%), Query Frame = 0


Query: 3   GDKRNILDHFRRELAAKFELKRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRN 62
           G KRN  DH RR LAA+FEL+RKLYKA C DP LP+++R++ RYKLSKLPRNS+F R+RN
Sbjct: 66  GVKRNSADHRRRLLAARFELRRKLYKAFCKDPDLPSEMRDKNRYKLSKLPRNSAFARIRN 125

Query: 63  RCIFTGRPRSVYQLFRVSRIVFRDLATKGLIMGVKKSSW 102
           RC+FTGR RSV +LFRVSRIVFR LA+KG +MG+ KSSW
Sbjct: 126 RCVFTGRSRSVTELFRVSRIVFRGLASKGALMGITKSSW 164

[Close]

BLAST of Lsi08G006640 vs. TAIR 10
Match: ATCG00330.1 (chloroplast ribosomal protein S14 )

HSP 1 Score: 54.3 bits (129), Expect = 6.6e-08
Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 13  RRELAAKFEL-KRKLYKAICNDPSLPNDVREEQRYKLSKLPRNSSFTRLRNRCIFTGRPR 72
           R++L  K+ L +R   K I   PSL    + +   KL   PRNS+ TRL  RC  TGRPR
Sbjct: 13  RQKLEKKYHLIRRSSKKEISKIPSLSE--KWKIHGKLQSPPRNSAPTRLHRRCFSTGRPR 72

Query: 73  SVYQLFRVSRIVFRDLATKGLIMGVKKSSW 102
           + Y+ F +S  + R++    L+ G  +SSW
Sbjct: 73  ANYRDFGLSGHILREMVQACLLPGATRSSW 100

The following BLAST results are available for this feature:

BLAST of Lsi08G006640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P14875	3.0e-37	73.47	Ribosomal protein S14, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPS14 PE...	[more]
P05716	2.5e-36	73.47	Ribosomal protein S14, mitochondrial OS=Vicia faba OX=3906 GN=RPS14 PE=3 SV=2	[more]
P49387	1.8e-34	70.41	Ribosomal protein S14, mitochondrial OS=Brassica napus OX=3708 GN=RPS14 PE=3 SV=...	[more]
P26873	2.4e-31	70.21	Ribosomal protein S14, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS14 P...	[more]
P46752	2.5e-20	58.43	Ribosomal protein S14, mitochondrial OS=Prototheca wickerhamii OX=3111 GN=RPS14 ...	[more]

BLAST of Lsi08G006640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C264	6.6e-48	95.05	uncharacterized protein LOC111006733 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1FKA4	6.2e-46	92.08	uncharacterized protein LOC111444996 OS=Cucurbita moschata OX=3662 GN=LOC1114449...	[more]
A0A5D3CKB3	6.4e-43	86.14	Ribosomal protein S14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30...	[more]
A0A1S4E169	6.4e-43	86.14	ribosomal protein S14, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496488 PE=...	[more]
A0A0A0LSR8	4.1e-42	85.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G386130 PE=3 SV=1	[more]

BLAST of Lsi08G006640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134507.1	1.4e-47	95.05	uncharacterized protein LOC111006733 [Momordica charantia] >XP_022134508.1 uncha...	[more]
XP_022938933.1	1.3e-45	92.08	uncharacterized protein LOC111444996 [Cucurbita moschata] >XP_022938934.1 unchar...	[more]
XP_023550870.1	1.7e-45	91.09	uncharacterized protein LOC111808878 [Cucurbita pepo subsp. pepo]	[more]
XP_038884392.1	1.7e-45	92.08	ribosomal protein S14, mitochondrial [Benincasa hispida]	[more]
KAG7032953.1	3.7e-45	91.09	Ribosomal protein S14, mitochondrial, partial [Cucurbita argyrosperma subsp. arg...	[more]

BLAST of Lsi08G006640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34520.1	3.4e-36	70.71	mitochondrial ribosomal protein S14	[more]
ATCG00330.1	6.6e-08	38.89	chloroplast ribosomal protein S14	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001209	Ribosomal protein S14	PFAM	PF00253	Ribosomal_S14	coord: 47..100 e-value: 7.1E-24 score: 83.3
IPR001209	Ribosomal protein S14	PANTHER	PTHR19836	30S RIBOSOMAL PROTEIN S14	coord: 3..101
None	No IPR available	GENE3D	1.10.287.1480		coord: 3..91 e-value: 6.5E-32 score: 111.8
None	No IPR available	PANTHER	PTHR19836:SF30	RIBOSOMAL PROTEIN S14	coord: 3..101
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 8..101
IPR018271	Ribosomal protein S14, conserved site	PROSITE	PS00527	RIBOSOMAL_S14	coord: 63..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G006640.1	Lsi08G006640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome