Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCACTATACCCACCACTCGCCTCTCTGGCTTCAAACCGTACCACAAACAAACCATTTCAACCATCTCCTCTGTTTCTCTCTCCCAAATTCCTTCCTCCACATTTCCCCAGACCAAAATTCGAAAAAAAAAAAATCCAAATCCATGGACGATATTAGGACGAAATTCCCAAGAAAACCTACCCATATCCCAGATCCTATCCCACGAACAGCCACTTCCTATTATAAATCTCCAGAACATGACTCCACATCCGAAGATTGCATCATTTTCAGAGGCTGGGACAGTGCTGCTGCCGTCGACGATGACTCTCAATCCGAATCCGGGGTTTGTTCACCCACGCTTTGGGCTTCCAATTCTCGAACCAGCCCCCAATTTCACCGCCCCCGTAATCGCAGCCTCTCCCCAACTTCCCGAACCCAAGCCATAGCCAGAGGCCAACAGGAGCTCATGGAGATGGTCAGGAACATGCCCGAATCATCTTACGAGCTTTCTCTCAAAGATCTCGTCGAACATCACTTGACTAATTCGAAACGCCAACAAGACGGTGACGCTACTTCCCTTTCAAGAGACGATTCCAGCTCTGAAACTTCCTTCCGAAGAGACCCTAGCAAGACCCGGAGTGAAACTAGGGCACTCGTTACCAGAAGTAGAAGCGTCGATAACGGTGGATTTTACCTCAAAATGTTCTTCCCACTGCCTTTTGGGCAGGTTTCGGCTAAAAAGAAGAGTAATCTCAGAACCGATTCGGGGTTGAGTGGTAGTTCGAGAGTGTCTCCTAAGCCACCGCCAGTGGACAGAGACTGGTGGAGGAAGAGATCGTCGGTAGCCGGCGGTGAGAACGAGGGTAGTATCTCCGGCGGAAGCATGACGAGTAGCGGCAGTAGTAATAGCACTAGCAGCGAAAGAAGCAATAGCAGGTAAACCAACAAAATTTTGATGAATTGCAATTGATGAGCCCTAATTTTGGCTTGATTTTTATTGAATCCTGACAAAAACCCAATTCCAGAATTGAAAACATTCAATCAACTGACTTAGGAATTGGAATCGTCAGCCAATAATTGTTTGGTGGTTGGAATTTTGGCTAACAGTCTGAATCTTGGATTTGTTATTTCACTTGTTTTTTTTTTGGCTTTATATGATCAATGAATTTTGGTAATTGTGGGTAATAATTCAAGAATTTTGACTTTGTTTATTTGATGTACAGGAATTCTGAATCGCAAGGAAGTTGCTGGTTTTGTATCAGTCCAATGAGAAGTAAAGATCATCGAGAGTAAAACAGCTTCATCGGAGTATTCAAATGAAATGAATCTTAATATGTAATTTCCTTTGAATAATGTTTTGGTATAATTCCCACTTAATCACAGCTGAATTTTGCAGCTAAGCTTGTTTATATCTTTTTGTTTTATTTCTACTTTTTTCCTTTAAAAAACGATTCCTTGTCTTTATCCTCTCTTTCTTCATCTCTATTTTAATTTCCATGTTATATGTATATGTATATGTATGTATGTATATATATATATATATATATATATTGTTAACCAG
mRNA sequence
CTCCACTATACCCACCACTCGCCTCTCTGGCTTCAAACCGTACCACAAACAAACCATTTCAACCATCTCCTCTGTTTCTCTCTCCCAAATTCCTTCCTCCACATTTCCCCAGACCAAAATTCGAAAAAAAAAAAATCCAAATCCATGGACGATATTAGGACGAAATTCCCAAGAAAACCTACCCATATCCCAGATCCTATCCCACGAACAGCCACTTCCTATTATAAATCTCCAGAACATGACTCCACATCCGAAGATTGCATCATTTTCAGAGGCTGGGACAGTGCTGCTGCCGTCGACGATGACTCTCAATCCGAATCCGGGGTTTGTTCACCCACGCTTTGGGCTTCCAATTCTCGAACCAGCCCCCAATTTCACCGCCCCCGTAATCGCAGCCTCTCCCCAACTTCCCGAACCCAAGCCATAGCCAGAGGCCAACAGGAGCTCATGGAGATGGTCAGGAACATGCCCGAATCATCTTACGAGCTTTCTCTCAAAGATCTCGTCGAACATCACTTGACTAATTCGAAACGCCAACAAGACGGTGACGCTACTTCCCTTTCAAGAGACGATTCCAGCTCTGAAACTTCCTTCCGAAGAGACCCTAGCAAGACCCGGAGTGAAACTAGGGCACTCGTTACCAGAAGTAGAAGCGTCGATAACGGTGGATTTTACCTCAAAATGTTCTTCCCACTGCCTTTTGGGCAGGTTTCGGCTAAAAAGAAGAGTAATCTCAGAACCGATTCGGGGTTGAGTGGTAGTTCGAGAGTGTCTCCTAAGCCACCGCCAGTGGACAGAGACTGGTGGAGGAAGAGATCGTCGGTAGCCGGCGGTGAGAACGAGGGTAGTATCTCCGGCGGAAGCATGACGAGTAGCGGCAGTAGTAATAGCACTAGCAGCGAAAGAAGCAATAGCAGGAATTCTGAATCGCAAGGAAGTTGCTGGTTTTGTATCAGTCCAATGAGAAGTAAAGATCATCGAGAGTAAAACAGCTTCATCGGAGTATTCAAATGAAATGAATCTTAATATGTAATTTCCTTTGAATAATGTTTTGGTATAATTCCCACTTAATCACAGCTGAATTTTGCAGCTAAGCTTGTTTATATCTTTTTGTTTTATTTCTACTTTTTTCCTTTAAAAAACGATTCCTTGTCTTTATCCTCTCTTTCTTCATCTCTATTTTAATTTCCATGTTATATGTATATGTATATGTATGTATGTATATATATATATATATATATATATTGTTAACCAG
Coding sequence (CDS)
ATGGACGATATTAGGACGAAATTCCCAAGAAAACCTACCCATATCCCAGATCCTATCCCACGAACAGCCACTTCCTATTATAAATCTCCAGAACATGACTCCACATCCGAAGATTGCATCATTTTCAGAGGCTGGGACAGTGCTGCTGCCGTCGACGATGACTCTCAATCCGAATCCGGGGTTTGTTCACCCACGCTTTGGGCTTCCAATTCTCGAACCAGCCCCCAATTTCACCGCCCCCGTAATCGCAGCCTCTCCCCAACTTCCCGAACCCAAGCCATAGCCAGAGGCCAACAGGAGCTCATGGAGATGGTCAGGAACATGCCCGAATCATCTTACGAGCTTTCTCTCAAAGATCTCGTCGAACATCACTTGACTAATTCGAAACGCCAACAAGACGGTGACGCTACTTCCCTTTCAAGAGACGATTCCAGCTCTGAAACTTCCTTCCGAAGAGACCCTAGCAAGACCCGGAGTGAAACTAGGGCACTCGTTACCAGAAGTAGAAGCGTCGATAACGGTGGATTTTACCTCAAAATGTTCTTCCCACTGCCTTTTGGGCAGGTTTCGGCTAAAAAGAAGAGTAATCTCAGAACCGATTCGGGGTTGAGTGGTAGTTCGAGAGTGTCTCCTAAGCCACCGCCAGTGGACAGAGACTGGTGGAGGAAGAGATCGTCGGTAGCCGGCGGTGAGAACGAGGGTAGTATCTCCGGCGGAAGCATGACGAGTAGCGGCAGTAGTAATAGCACTAGCAGCGAAAGAAGCAATAGCAGGAATTCTGAATCGCAAGGAAGTTGCTGGTTTTGTATCAGTCCAATGAGAAGTAAAGATCATCGAGAGTAA
Protein sequence
MDDIRTKFPRKPTHIPDPIPRTATSYYKSPEHDSTSEDCIIFRGWDSAAAVDDDSQSESGVCSPTLWASNSRTSPQFHRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRALVTRSRSVDNGGFYLKMFFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPPPVDRDWWRKRSSVAGGENEGSISGGSMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKDHRE
Homology
BLAST of Lsi08G005060 vs. ExPASy TrEMBL
Match:
A0A1S3B3A7 (uncharacterized protein LOC103485667 OS=Cucumis melo OX=3656 GN=LOC103485667 PE=4 SV=1)
HSP 1 Score: 464.2 bits (1193), Expect = 4.0e-127
Identity = 247/277 (89.17%), Postives = 255/277 (92.06%), Query Frame = 0
Query: 1 MDDIRTKFPRKPTHIPDPIPRTATSYYKSPEHDSTSEDCIIFRGWDSAAAVDDDSQSESG 60
M DI TKFP P PIP SYYKSPEH+ SEDCIIFRGWDSAAA+DDDSQSESG
Sbjct: 1 MGDINTKFP------PKPIPPNPDSYYKSPEHN--SEDCIIFRGWDSAAAIDDDSQSESG 60
Query: 61 VCSPTLWASNSRTSPQFHRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDL 120
V SPTLWASNSRT+PQFHR RNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDL
Sbjct: 61 VSSPTLWASNSRTTPQFHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDL 120
Query: 121 VEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRALVTRSRSVDNGGFYLKM 180
VEHHLTNSKRQQDG SLSRDDSSSETSFRRDPSK R ETRALVTRSRSVD+GGFYLKM
Sbjct: 121 VEHHLTNSKRQQDGAVASLSRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKM 180
Query: 181 FFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPPPVDRDWWRKRSSVAGGENEGSISGGS 240
FFPLPFGQVSAKKK+NLRTDSGLSGSSRVSPKPPPVD+DWWRKRSSV+GGEN+GSISGGS
Sbjct: 181 FFPLPFGQVSAKKKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGGS 240
Query: 241 MTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD 278
MTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD
Sbjct: 241 MTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD 269
BLAST of Lsi08G005060 vs. ExPASy TrEMBL
Match:
A0A0A0KCW4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G349820 PE=4 SV=1)
HSP 1 Score: 453.4 bits (1165), Expect = 7.0e-124
Identity = 244/278 (87.77%), Postives = 253/278 (91.01%), Query Frame = 0
Query: 1 MDDIRTKFPRKPTHIPDPIPRTATSYYKSPEHDSTSEDCIIFRGWDSAAAVDDDSQSESG 60
M DI TK P KP SYYKSPEH+ SEDCIIFRGWDSAAA+DDDSQSESG
Sbjct: 1 MGDINTKLPPKP-----------DSYYKSPEHN--SEDCIIFRGWDSAAAIDDDSQSESG 60
Query: 61 VCSPTLWASNSRTSPQF-HRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKD 120
V SPTLWASNSRT+PQF HR RNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKD
Sbjct: 61 VSSPTLWASNSRTTPQFHHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKD 120
Query: 121 LVEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRALVTRSRSVDNGGFYLK 180
LVEHHLTNSKRQQDGD SL+RDDSSSETSFRRDPSK R ETRALVTRSRSVD+GGFYLK
Sbjct: 121 LVEHHLTNSKRQQDGDVASLTRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLK 180
Query: 181 MFFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPPPVDRDWWRKRSSVAGGENEGSISGG 240
MFFPLPFGQVSAKKK+NLRTDSGLSGSSRVSPKPPPVD+DWWRKRSSV+GGEN+GSISGG
Sbjct: 181 MFFPLPFGQVSAKKKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGG 240
Query: 241 SMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD 278
SMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD
Sbjct: 241 SMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD 265
BLAST of Lsi08G005060 vs. ExPASy TrEMBL
Match:
A0A5D3DJL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G001120 PE=4 SV=1)
HSP 1 Score: 424.5 bits (1090), Expect = 3.5e-115
Identity = 228/258 (88.37%), Postives = 236/258 (91.47%), Query Frame = 0
Query: 1 MDDIRTKFPRKPTHIPDPIPRTATSYYKSPEHDSTSEDCIIFRGWDSAAAVDDDSQSESG 60
M DI TKFP P PIP SYYKSPEH+ SEDCIIFRGWDSAAA+DDDSQSESG
Sbjct: 1 MGDINTKFP------PKPIPPNPDSYYKSPEHN--SEDCIIFRGWDSAAAIDDDSQSESG 60
Query: 61 VCSPTLWASNSRTSPQFHRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDL 120
V SPTLWASNSRT+PQFHR RNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDL
Sbjct: 61 VSSPTLWASNSRTTPQFHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDL 120
Query: 121 VEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRALVTRSRSVDNGGFYLKM 180
VEHHLTNSKRQQDG SLSRDDSSSETSFRRDPSK R ETRALVTRSRSVD+GGFYLKM
Sbjct: 121 VEHHLTNSKRQQDGAVASLSRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKM 180
Query: 181 FFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPPPVDRDWWRKRSSVAGGENEGSISGGS 240
FFPLPFGQVSAKKK+NLRTDSGLSGSSRVSPKPPPVD+DWWRKRSSV+GGEN+GSISGGS
Sbjct: 181 FFPLPFGQVSAKKKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGGS 240
Query: 241 MTSSGSSNSTSSERSNSR 259
MTSSGSSNSTSSERSNSR
Sbjct: 241 MTSSGSSNSTSSERSNSR 250
BLAST of Lsi08G005060 vs. ExPASy TrEMBL
Match:
A0A6J1FJY2 (uncharacterized protein LOC111444710 OS=Cucurbita moschata OX=3662 GN=LOC111444710 PE=4 SV=1)
HSP 1 Score: 374.0 bits (959), Expect = 5.4e-100
Identity = 208/243 (85.60%), Postives = 218/243 (89.71%), Query Frame = 0
Query: 35 TSEDCIIFRGWDSAAAVDDDSQSESGVCSPTLWASNSRTSPQFHRPRNRSLSPTSRTQAI 94
T+EDCIIFRGWDSAA DDDSQSESGVCSPTLW SNSRT+ QFHRPRNRSLSPTSRTQAI
Sbjct: 7 TAEDCIIFRGWDSAAG-DDDSQSESGVCSPTLWGSNSRTNLQFHRPRNRSLSPTSRTQAI 66
Query: 95 ARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDP 154
ARGQQELMEMVRNMPESSYELSLKDLVEHHL+NS+R QDGDA SLSRDDS+SETSFRRD
Sbjct: 67 ARGQQELMEMVRNMPESSYELSLKDLVEHHLSNSER-QDGDA-SLSRDDSASETSFRRDT 126
Query: 155 SKTRSETRALVTRSRSVDNGGFYLKMFFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPP 214
SKTRSETRALVTRSRSVD+GGFYLKMF PLPFGQ+SAKKK NLRTDSGL+ SSRVSPKPP
Sbjct: 127 SKTRSETRALVTRSRSVDSGGFYLKMFLPLPFGQMSAKKKRNLRTDSGLNSSSRVSPKPP 186
Query: 215 PVDRDWWRKRSSVAGGENEGSISGGSMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMR 274
PVDR+WWRKRS NEGS+SG GSSNSTSSER SRNSESQG CWFCISPMR
Sbjct: 187 PVDREWWRKRS------NEGSVSG------GSSNSTSSER--SRNSESQGGCWFCISPMR 232
Query: 275 SKD 278
SKD
Sbjct: 247 SKD 232
BLAST of Lsi08G005060 vs. ExPASy TrEMBL
Match:
A0A6J1K1H6 (uncharacterized protein LOC111489776 OS=Cucurbita maxima OX=3661 GN=LOC111489776 PE=4 SV=1)
HSP 1 Score: 371.7 bits (953), Expect = 2.7e-99
Identity = 207/243 (85.19%), Postives = 217/243 (89.30%), Query Frame = 0
Query: 35 TSEDCIIFRGWDSAAAVDDDSQSESGVCSPTLWASNSRTSPQFHRPRNRSLSPTSRTQAI 94
T+EDCIIFRGWDSAA DDDSQ ESGVCSPTLW SNSRT+ QFHRPRNRSLSPTSRTQAI
Sbjct: 7 TAEDCIIFRGWDSAAG-DDDSQLESGVCSPTLWGSNSRTNLQFHRPRNRSLSPTSRTQAI 66
Query: 95 ARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDP 154
ARGQQELMEMVRNMPESSYELSLKDLVEHHL+NS+R QDGDA SLSRDDS+SETSFRRD
Sbjct: 67 ARGQQELMEMVRNMPESSYELSLKDLVEHHLSNSER-QDGDA-SLSRDDSASETSFRRDT 126
Query: 155 SKTRSETRALVTRSRSVDNGGFYLKMFFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPP 214
SKTRSETRALVTRSRSVD+GGFYLKMF PLPFGQ+SAKKK NLRTDSGL+ SSRVSPKPP
Sbjct: 127 SKTRSETRALVTRSRSVDSGGFYLKMFLPLPFGQMSAKKKRNLRTDSGLNSSSRVSPKPP 186
Query: 215 PVDRDWWRKRSSVAGGENEGSISGGSMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMR 274
PVDR+WWRKRS NEGS+SG GSSNSTSSER SRNSESQG CWFCISPMR
Sbjct: 187 PVDREWWRKRS------NEGSVSG------GSSNSTSSER--SRNSESQGGCWFCISPMR 232
Query: 275 SKD 278
SKD
Sbjct: 247 SKD 232
BLAST of Lsi08G005060 vs. NCBI nr
Match:
XP_008441584.1 (PREDICTED: uncharacterized protein LOC103485667 [Cucumis melo])
HSP 1 Score: 464.2 bits (1193), Expect = 8.2e-127
Identity = 247/277 (89.17%), Postives = 255/277 (92.06%), Query Frame = 0
Query: 1 MDDIRTKFPRKPTHIPDPIPRTATSYYKSPEHDSTSEDCIIFRGWDSAAAVDDDSQSESG 60
M DI TKFP P PIP SYYKSPEH+ SEDCIIFRGWDSAAA+DDDSQSESG
Sbjct: 1 MGDINTKFP------PKPIPPNPDSYYKSPEHN--SEDCIIFRGWDSAAAIDDDSQSESG 60
Query: 61 VCSPTLWASNSRTSPQFHRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDL 120
V SPTLWASNSRT+PQFHR RNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDL
Sbjct: 61 VSSPTLWASNSRTTPQFHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDL 120
Query: 121 VEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRALVTRSRSVDNGGFYLKM 180
VEHHLTNSKRQQDG SLSRDDSSSETSFRRDPSK R ETRALVTRSRSVD+GGFYLKM
Sbjct: 121 VEHHLTNSKRQQDGAVASLSRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKM 180
Query: 181 FFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPPPVDRDWWRKRSSVAGGENEGSISGGS 240
FFPLPFGQVSAKKK+NLRTDSGLSGSSRVSPKPPPVD+DWWRKRSSV+GGEN+GSISGGS
Sbjct: 181 FFPLPFGQVSAKKKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGGS 240
Query: 241 MTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD 278
MTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD
Sbjct: 241 MTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD 269
BLAST of Lsi08G005060 vs. NCBI nr
Match:
XP_038885358.1 (uncharacterized protein LOC120075766 [Benincasa hispida])
HSP 1 Score: 456.1 bits (1172), Expect = 2.2e-124
Identity = 244/279 (87.46%), Postives = 254/279 (91.04%), Query Frame = 0
Query: 1 MDDIRTKFPRKPTHIPDPIPRTATSYYKSPEHDSTSEDCIIFRGWDSAAAVDDDSQSESG 60
M DIRTKFPRK H PD ++YYKSP+ D EDCIIFRGWDSAAA+DDDSQSESG
Sbjct: 1 MGDIRTKFPRKSAHTPD------STYYKSPDQD---EDCIIFRGWDSAAAIDDDSQSESG 60
Query: 61 VCSPTLWASNSRTSPQFHRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDL 120
V SPTLW SNSRTSPQFHRPRNRSLSPTSR QAIARGQQELMEMVRNMPESSYELSLKDL
Sbjct: 61 VSSPTLWGSNSRTSPQFHRPRNRSLSPTSRIQAIARGQQELMEMVRNMPESSYELSLKDL 120
Query: 121 VEHHLTNSKRQQDGD--ATSLSRDDSSSETSFRRDPSKTRSETRALVTRSRSVDNGGFYL 180
VEHHLTNSKRQQDGD A SL+RDDSSSETSFRRD SKTRSETR LVTRSRSVD+GGFYL
Sbjct: 121 VEHHLTNSKRQQDGDCAAASLARDDSSSETSFRRDSSKTRSETRGLVTRSRSVDSGGFYL 180
Query: 181 KMFFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPPPVDRDWWRKRSSVAGGENEGSISG 240
KMF PLPFGQVSAKKK+NLRTDSGLSG SRVSPKPPPV++DWWRKRS+VAGGENEGSISG
Sbjct: 181 KMFLPLPFGQVSAKKKTNLRTDSGLSGGSRVSPKPPPVEKDWWRKRSAVAGGENEGSISG 240
Query: 241 GSMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD 278
GSM SSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD
Sbjct: 241 GSMMSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD 270
BLAST of Lsi08G005060 vs. NCBI nr
Match:
XP_004144253.1 (uncharacterized protein LOC101219576 [Cucumis sativus] >KGN47505.1 hypothetical protein Csa_019018 [Cucumis sativus])
HSP 1 Score: 453.4 bits (1165), Expect = 1.5e-123
Identity = 244/278 (87.77%), Postives = 253/278 (91.01%), Query Frame = 0
Query: 1 MDDIRTKFPRKPTHIPDPIPRTATSYYKSPEHDSTSEDCIIFRGWDSAAAVDDDSQSESG 60
M DI TK P KP SYYKSPEH+ SEDCIIFRGWDSAAA+DDDSQSESG
Sbjct: 1 MGDINTKLPPKP-----------DSYYKSPEHN--SEDCIIFRGWDSAAAIDDDSQSESG 60
Query: 61 VCSPTLWASNSRTSPQF-HRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKD 120
V SPTLWASNSRT+PQF HR RNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKD
Sbjct: 61 VSSPTLWASNSRTTPQFHHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKD 120
Query: 121 LVEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRALVTRSRSVDNGGFYLK 180
LVEHHLTNSKRQQDGD SL+RDDSSSETSFRRDPSK R ETRALVTRSRSVD+GGFYLK
Sbjct: 121 LVEHHLTNSKRQQDGDVASLTRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLK 180
Query: 181 MFFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPPPVDRDWWRKRSSVAGGENEGSISGG 240
MFFPLPFGQVSAKKK+NLRTDSGLSGSSRVSPKPPPVD+DWWRKRSSV+GGEN+GSISGG
Sbjct: 181 MFFPLPFGQVSAKKKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGG 240
Query: 241 SMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD 278
SMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD
Sbjct: 241 SMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD 265
BLAST of Lsi08G005060 vs. NCBI nr
Match:
TYK23785.1 (uncharacterized protein E5676_scaffold1607G001120 [Cucumis melo var. makuwa])
HSP 1 Score: 424.5 bits (1090), Expect = 7.2e-115
Identity = 228/258 (88.37%), Postives = 236/258 (91.47%), Query Frame = 0
Query: 1 MDDIRTKFPRKPTHIPDPIPRTATSYYKSPEHDSTSEDCIIFRGWDSAAAVDDDSQSESG 60
M DI TKFP P PIP SYYKSPEH+ SEDCIIFRGWDSAAA+DDDSQSESG
Sbjct: 1 MGDINTKFP------PKPIPPNPDSYYKSPEHN--SEDCIIFRGWDSAAAIDDDSQSESG 60
Query: 61 VCSPTLWASNSRTSPQFHRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDL 120
V SPTLWASNSRT+PQFHR RNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDL
Sbjct: 61 VSSPTLWASNSRTTPQFHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDL 120
Query: 121 VEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRALVTRSRSVDNGGFYLKM 180
VEHHLTNSKRQQDG SLSRDDSSSETSFRRDPSK R ETRALVTRSRSVD+GGFYLKM
Sbjct: 121 VEHHLTNSKRQQDGAVASLSRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKM 180
Query: 181 FFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPPPVDRDWWRKRSSVAGGENEGSISGGS 240
FFPLPFGQVSAKKK+NLRTDSGLSGSSRVSPKPPPVD+DWWRKRSSV+GGEN+GSISGGS
Sbjct: 181 FFPLPFGQVSAKKKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGGS 240
Query: 241 MTSSGSSNSTSSERSNSR 259
MTSSGSSNSTSSERSNSR
Sbjct: 241 MTSSGSSNSTSSERSNSR 250
BLAST of Lsi08G005060 vs. NCBI nr
Match:
KAG6578929.1 (TOM1-like protein 3, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 374.0 bits (959), Expect = 1.1e-99
Identity = 208/243 (85.60%), Postives = 218/243 (89.71%), Query Frame = 0
Query: 35 TSEDCIIFRGWDSAAAVDDDSQSESGVCSPTLWASNSRTSPQFHRPRNRSLSPTSRTQAI 94
T+EDCIIFRGWDSAA DDDSQSESGVCSPTLW SNSRT+ QFHRPRNRSLSPTSRTQAI
Sbjct: 7 TAEDCIIFRGWDSAAG-DDDSQSESGVCSPTLWGSNSRTNLQFHRPRNRSLSPTSRTQAI 66
Query: 95 ARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDP 154
ARGQQELMEMVRNMPESSYELSLKDLVEHHL+NS+R QDGDA SLSRDDS+SETSFRRD
Sbjct: 67 ARGQQELMEMVRNMPESSYELSLKDLVEHHLSNSER-QDGDA-SLSRDDSASETSFRRDT 126
Query: 155 SKTRSETRALVTRSRSVDNGGFYLKMFFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPP 214
SKTRSETRALVTRSRSVD+GGFYLKMF PLPFGQ+SAKKK NLRTDSGL+ SSRVSPKPP
Sbjct: 127 SKTRSETRALVTRSRSVDSGGFYLKMFLPLPFGQMSAKKKRNLRTDSGLNSSSRVSPKPP 186
Query: 215 PVDRDWWRKRSSVAGGENEGSISGGSMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMR 274
PVDR+WWRKRS NEGS+SG GSSNSTSSER SRNSESQG CWFCISPMR
Sbjct: 187 PVDREWWRKRS------NEGSVSG------GSSNSTSSER--SRNSESQGGCWFCISPMR 232
Query: 275 SKD 278
SKD
Sbjct: 247 SKD 232
BLAST of Lsi08G005060 vs. TAIR 10
Match:
AT1G21390.1 (embryo defective 2170 )
HSP 1 Score: 108.2 bits (269), Expect = 1.1e-23
Identity = 88/225 (39.11%), Postives = 118/225 (52.44%), Query Frame = 0
Query: 50 AVDDDSQSESGVCSPTLW-ASNSRTSPQFHRPRNR-SLSPTSRTQAIARGQQELMEMVRN 109
++ +D S+SGVCSPTLW S ++ P FHRP + SLSP S+ QAIARGQ+ELMEMV
Sbjct: 18 SIPNDDHSDSGVCSPTLWRTSPPKSPPPFHRPEDYWSLSPDSKAQAIARGQRELMEMVSK 77
Query: 110 MPESSYELSLKDLVEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRALVTR 169
MPES YELSLKDLVE + ++ D + S KT+S+ R R
Sbjct: 78 MPESCYELSLKDLVEVKVNQENERKVFDELPKRANRQSKVV------RKTKSDKRVDPNR 137
Query: 170 SRSVDNGGFYLKMFFPLPFGQV--SAKKKSNLRTDSGLSGSSRVSPKPPPV---DRDWWR 229
S +N GF LK+ F + G + + KKK + D S R S V D++WW
Sbjct: 138 SGGGNNSGFLLKIMFLVSLGAMKDTTKKKKKKKKDEACKVSPRPSISEETVKVEDKEWWN 197
Query: 230 KRSSVAGGENEGSISGGSMTSSGSSNSTSSERSNSRNSESQGSCW 268
+ +S S SGSS+S +S RS S + + SC+
Sbjct: 198 R------------MSESSTKRSGSSSSNNSIRSRSSLRDEKSSCF 224
BLAST of Lsi08G005060 vs. TAIR 10
Match:
AT1G76980.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 61 Blast hits to 61 proteins in 18 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 2; Plants - 40; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 101.3 bits (251), Expect = 1.3e-21
Identity = 91/237 (38.40%), Postives = 125/237 (52.74%), Query Frame = 0
Query: 54 DSQSESGVCSPTLWASNSRTSPQFHRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSY 113
D S+SGVCSP LW ++ SP ++LSP ++ Q IARGQ+ELM+MV MPES Y
Sbjct: 22 DDHSDSGVCSPPLWRTSPPKSPAHLHNNYQNLSPVTKAQVIARGQRELMDMVSKMPESCY 81
Query: 114 ELSLKDLVEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRALVTRSRSVDN 173
ELSLKDLVE N++ ++ D + E R+ KT+S+ R+ V+N
Sbjct: 82 ELSLKDLVE---VNTEEEKVFD------EMPQREKKPRKVVRKTKSDKWVDPIRNGGVNN 141
Query: 174 GGFYLKMFFPLPFGQVSAKKKSNLRTDSGLSGSSRV-------SPKP-------PPVDRD 233
GF LK+ FP+ G AKKK+N + D+ SS SP+P D+D
Sbjct: 142 SGFLLKLVFPVSLG---AKKKTNKKKDNDDDDSSVTSKRSWISSPRPSISDLSMKREDKD 201
Query: 234 WW-------RKRSSVAGGENEGSISGGSMTSSGSSNSTSSERS-NSRNSESQGSCWF 269
WW R+ SV N SG S +S GSS+ ++S+RS NS E++G F
Sbjct: 202 WWKDGLSESRRSQSVVSRIN----SGSSKSSGGSSSRSNSDRSRNSLRDENRGCLSF 242
BLAST of Lsi08G005060 vs. TAIR 10
Match:
AT1G76980.1 (BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 65 Blast hits to 65 proteins in 23 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 8; Plants - 40; Viruses - 3; Other Eukaryotes - 5 (source: NCBI BLink). )
HSP 1 Score: 100.1 bits (248), Expect = 2.9e-21
Identity = 89/228 (39.04%), Postives = 121/228 (53.07%), Query Frame = 0
Query: 54 DSQSESGVCSPTLWASNSRTSPQFHRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSY 113
D S+SGVCSP LW ++ SP ++LSP ++ Q IARGQ+ELM+MV MPES Y
Sbjct: 22 DDHSDSGVCSPPLWRTSPPKSPAHLHNNYQNLSPVTKAQVIARGQRELMDMVSKMPESCY 81
Query: 114 ELSLKDLVEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRALVTRSRSVDN 173
ELSLKDLVE N++ ++ D + E R+ KT+S+ R+ V+N
Sbjct: 82 ELSLKDLVE---VNTEEEKVFD------EMPQREKKPRKVVRKTKSDKWVDPIRNGGVNN 141
Query: 174 GGFYLKMFFPLPFGQVSAKKKSNLRTDSGLSGSSRV-------SPKP-------PPVDRD 233
GF LK+ FP+ G AKKK+N + D+ SS SP+P D+D
Sbjct: 142 SGFLLKLVFPVSLG---AKKKTNKKKDNDDDDSSVTSKRSWISSPRPSISDLSMKREDKD 201
Query: 234 WW-------RKRSSVAGGENEGSISGGSMTSSGSSNSTSSERSNSRNS 261
WW R+ SV N SG S +S GSS+ ++S+R SRNS
Sbjct: 202 WWKDGLSESRRSQSVVSRIN----SGSSKSSGGSSSRSNSDR--SRNS 231
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3B3A7 | 4.0e-127 | 89.17 | uncharacterized protein LOC103485667 OS=Cucumis melo OX=3656 GN=LOC103485667 PE=... | [more] |
A0A0A0KCW4 | 7.0e-124 | 87.77 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G349820 PE=4 SV=1 | [more] |
A0A5D3DJL8 | 3.5e-115 | 88.37 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1FJY2 | 5.4e-100 | 85.60 | uncharacterized protein LOC111444710 OS=Cucurbita moschata OX=3662 GN=LOC1114447... | [more] |
A0A6J1K1H6 | 2.7e-99 | 85.19 | uncharacterized protein LOC111489776 OS=Cucurbita maxima OX=3661 GN=LOC111489776... | [more] |
Match Name | E-value | Identity | Description | |
XP_008441584.1 | 8.2e-127 | 89.17 | PREDICTED: uncharacterized protein LOC103485667 [Cucumis melo] | [more] |
XP_038885358.1 | 2.2e-124 | 87.46 | uncharacterized protein LOC120075766 [Benincasa hispida] | [more] |
XP_004144253.1 | 1.5e-123 | 87.77 | uncharacterized protein LOC101219576 [Cucumis sativus] >KGN47505.1 hypothetical ... | [more] |
TYK23785.1 | 7.2e-115 | 88.37 | uncharacterized protein E5676_scaffold1607G001120 [Cucumis melo var. makuwa] | [more] |
KAG6578929.1 | 1.1e-99 | 85.60 | TOM1-like protein 3, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
Match Name | E-value | Identity | Description | |
AT1G21390.1 | 1.1e-23 | 39.11 | embryo defective 2170 | [more] |
AT1G76980.2 | 1.3e-21 | 38.40 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... | [more] |
AT1G76980.1 | 2.9e-21 | 39.04 | BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G2139... | [more] |