Lsi08G004090 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G004090
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	CONSTANS-like zinc finger protein
Location	chr08: 11402607 .. 11405298 (-)
RNA-Seq Expression	Lsi08G004090
Synteny	Lsi08G004090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTCAAGAAAAAGCATAGCCAACGCAGTAGGCGGAAAGACCGCAAGAGCCTGCGACAGCTGCGTCCGTAAACGAGCCCGCTGGTACTGCGCCGCAGACGATGCCTTCCTCTGCCAATCCTGCGACTCCGCCGTCCATTCCGCCAACCCCCTCGCCCGTCGCCACCAACGCCTCCGCCTCAACTCCGCCACCAATAATTCCAAACCCTCTAATTATTCCCCGTCTTGGGTTTCCGGGTTCACTCGTAAGCCCCGTACCCCTCGTCCCCGCCCCAAATCGGAGGAGCTCCTGTCCGTCGTGCCGGAGACAGACGACGCCACTTCCGGATCCCACGAAGAAGAAGATCAAGTGTCGTTGTATAGAGTACCGAATTTGGAACAGGCGTTGGTTGATGAAGCGGATGATTTGGATGTGGATCTTTCGGATTTTGCTGCGGATGTGGAGAGTTTGTTGGGGAGGAATTTGGAGAGTGAGTGTTTTGATATGGAAGGGTTGGGATTGGTTAAGATGGAGGAGGATTATTGTAGAATTGGACAGCAATTTGAGGGTGAGATTGATTTGATGATGGGAGAGGCGTTTCAGTTGAATTTTGAAGAGTATGAGCAAGATGAGGAGATTAAGATACCAGTGGTAATGGGAGTGAAGAATGAAACAGAAGAAGAACATGATGAATCATTAGAAAGCAAGAAGAAAAGAAGAGTATTGAGTTTGCGATTGAATTGTGAGGCAGTCATTGCCGCTTGGGGTAATCTTAAGTCTCCTTGGACTAATGGAGAACGCCCTGATTTTGACCCTGACCAACCCTGGCCAAACTCCATGGTAAAGTTTTAATTTTTTTTAGATTTTTACTTCATTCTTCCCATATTTTAAATTCTAAAAACATAAAATTATATCTAGAAATTAGAGGGAAAAACAAAGGGGAAATTTATATGGAAGCAATGTTTATTAGTTTAATTTTAAAAAACTGAAAATAGTTAGATTTTATTAGGTAGTGATAGTTTTTTGTTTTTCATATTTAGTCTAAGTTGTGAAATTATATATATATATATATATATATATATATATATTTAGAATACTTGTTTTTTATTTTTGAAATTGAATTAAGAACAGAGAAAATCTATATATAAATAGTTTGATATTTTTTCTGTTTATAGTAATTTTCCATAATTCAATTTACTTACTCAGGAAATACAAACATAATTTAGAAAACTAAAATAAAAAAGTTAAAGACTCATTTAATAACTATATTATTTGTCCTTCTTATATTTTCAAAATTAAACCTTTTATAAGTATTATTCTCTAATCTCCTCAAGATTCATTTCATTATACTTTTTAAACATGTTTTAAAAAACTAAATAACTTTTTTAAAACTTAATTTTTTCTTTTTAAATTTTGATTTAAAATTCAGATGGGTTTTGTAGAATATAAAAAACATACCCAAAATTTGGGAAGAACAAATAAATAAAAAACAAACATCATTTAAAAAAAAAAAAAAAAGAAGAAGAAACTTAGATGCAACTTAGATGGTATCTATTTAATAACTATTAAGAAAAACAAACATAGTTTAAAAAACTAAAATAAAAAAAGTTAACATAATTATTAACTATTTTTTTTTATATTTTCAAAATTTTTATTATATGTACTACTCTCTAATTCCCTTAAGTTTCATTTCATTATACTTTTTAAAAACGTTTTCAAAAAGTAAGATAATTTTTTAAAACTTAATTTTAAATTTTTAAAACTTAATTTTATTTTTAAAAAAATTAATTTTGTCTTTTTAAAATTTGGCTTAAGCGTATCCAAAATTTGAAAAGAAAAAAGAATAAACATCGTTTTAAAAAGGAAGAAACTTTGGGTACAACTTAGATAGTACCTATTTAATAACTATCAAAGAATACCTATTCAATAACTATTAAGGAAAAACAAACATTGTTTAAAAAAACTAAAATAAAAAAGCTAAAACACATTTAGTAACTATTTTATTTTCCTTCTTATATTTTCAAAATTAAACTTATTATATGTTCTACTCTAATTCCCTAAAGTTTCATTTCATTATACTTTTTAAAAACGTTTTAAAAACTAAGATAATTTTTTAAAACTTAATTTTGTCTTTTTAAATTTTGGTTTAAAATTTAAATGTGTTTGGTAGAATATAAAAAGCATAACCAAAATTTAGAAAGAAAATAAACAAAACATCATTAAAAAAAAAAAATTGAGTGCAGCCGAGATAACACCAATAAAAAATTATCATGTGGTAGATAATTTTTTTAAATTAAACTATTTTCATTTTTTTTCTAATATATATATATATATATATATATATATATAAAAGATGCATGGATTGGGTGAAAAATAGAAGATAAGAGATAAAATAATTATCAAATATGTACCGATGAATTAATAAATGTTTGCTAATGTTAATAATGAACGATGTTTGCAGGCGGTTTGTGGAGTGAGCTACGGGCACACGTGTGGGGAGTATGGGGTGAGCACGGCGGCGATGGTGGACGGCGGGAGGGAGGCTCGTGTTTCACGGTACAGGGAGAAGCGGCGGACGAGGTTGTTTTCGAAGAAAATAAGGTATGAAGTTAGGAAATTGAATGCAGAGAAGAGGCCGAGAATGAAAGGGAGGTTTGTGAAGAGAACGCCTTTTGCACAACCAACTCTTCCAATTATTAGTATTAATTAA

mRNA sequence

ATGATGTCAAGAAAAAGCATAGCCAACGCAGTAGGCGGAAAGACCGCAAGAGCCTGCGACAGCTGCGTCCGTAAACGAGCCCGCTGGTACTGCGCCGCAGACGATGCCTTCCTCTGCCAATCCTGCGACTCCGCCGTCCATTCCGCCAACCCCCTCGCCCGTCGCCACCAACGCCTCCGCCTCAACTCCGCCACCAATAATTCCAAACCCTCTAATTATTCCCCGTCTTGGGTTTCCGGGTTCACTCGTAAGCCCCGTACCCCTCGTCCCCGCCCCAAATCGGAGGAGCTCCTGTCCGTCGTGCCGGAGACAGACGACGCCACTTCCGGATCCCACGAAGAAGAAGATCAAGTGTCGTTGTATAGAGTACCGAATTTGGAACAGGCGTTGGTTGATGAAGCGGATGATTTGGATGTGGATCTTTCGGATTTTGCTGCGGATGTGGAGAGTTTGTTGGGGAGGAATTTGGAGAGTGAGTGTTTTGATATGGAAGGGTTGGGATTGGTTAAGATGGAGGAGGATTATTGTAGAATTGGACAGCAATTTGAGGGTGAGATTGATTTGATGATGGGAGAGGCGTTTCAGTTGAATTTTGAAGAGTATGAGCAAGATGAGGAGATTAAGATACCAGTGGTAATGGGAGTGAAGAATGAAACAGAAGAAGAACATGATGAATCATTAGAAAGCAAGAAGAAAAGAAGAGTATTGAGTTTGCGATTGAATTGTGAGGCAGTCATTGCCGCTTGGGGTAATCTTAAGTCTCCTTGGACTAATGGAGAACGCCCTGATTTTGACCCTGACCAACCCTGGCCAAACTCCATGGCGGTTTGTGGAGTGAGCTACGGGCACACGTGTGGGGAGTATGGGGTGAGCACGGCGGCGATGGTGGACGGCGGGAGGGAGGCTCGTGTTTCACGGTACAGGGAGAAGCGGCGGACGAGGTTGTTTTCGAAGAAAATAAGGTATGAAGTTAGGAAATTGAATGCAGAGAAGAGGCCGAGAATGAAAGGGAGGTTTGTGAAGAGAACGCCTTTTGCACAACCAACTCTTCCAATTATTAGTATTAATTAA

Coding sequence (CDS)

ATGATGTCAAGAAAAAGCATAGCCAACGCAGTAGGCGGAAAGACCGCAAGAGCCTGCGACAGCTGCGTCCGTAAACGAGCCCGCTGGTACTGCGCCGCAGACGATGCCTTCCTCTGCCAATCCTGCGACTCCGCCGTCCATTCCGCCAACCCCCTCGCCCGTCGCCACCAACGCCTCCGCCTCAACTCCGCCACCAATAATTCCAAACCCTCTAATTATTCCCCGTCTTGGGTTTCCGGGTTCACTCGTAAGCCCCGTACCCCTCGTCCCCGCCCCAAATCGGAGGAGCTCCTGTCCGTCGTGCCGGAGACAGACGACGCCACTTCCGGATCCCACGAAGAAGAAGATCAAGTGTCGTTGTATAGAGTACCGAATTTGGAACAGGCGTTGGTTGATGAAGCGGATGATTTGGATGTGGATCTTTCGGATTTTGCTGCGGATGTGGAGAGTTTGTTGGGGAGGAATTTGGAGAGTGAGTGTTTTGATATGGAAGGGTTGGGATTGGTTAAGATGGAGGAGGATTATTGTAGAATTGGACAGCAATTTGAGGGTGAGATTGATTTGATGATGGGAGAGGCGTTTCAGTTGAATTTTGAAGAGTATGAGCAAGATGAGGAGATTAAGATACCAGTGGTAATGGGAGTGAAGAATGAAACAGAAGAAGAACATGATGAATCATTAGAAAGCAAGAAGAAAAGAAGAGTATTGAGTTTGCGATTGAATTGTGAGGCAGTCATTGCCGCTTGGGGTAATCTTAAGTCTCCTTGGACTAATGGAGAACGCCCTGATTTTGACCCTGACCAACCCTGGCCAAACTCCATGGCGGTTTGTGGAGTGAGCTACGGGCACACGTGTGGGGAGTATGGGGTGAGCACGGCGGCGATGGTGGACGGCGGGAGGGAGGCTCGTGTTTCACGGTACAGGGAGAAGCGGCGGACGAGGTTGTTTTCGAAGAAAATAAGGTATGAAGTTAGGAAATTGAATGCAGAGAAGAGGCCGAGAATGAAAGGGAGGTTTGTGAAGAGAACGCCTTTTGCACAACCAACTCTTCCAATTATTAGTATTAATTAA

Protein sequence

MMSRKSIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLRLNSATNNSKPSNYSPSWVSGFTRKPRTPRPRPKSEELLSVVPETDDATSGSHEEEDQVSLYRVPNLEQALVDEADDLDVDLSDFAADVESLLGRNLESECFDMEGLGLVKMEEDYCRIGQQFEGEIDLMMGEAFQLNFEEYEQDEEIKIPVVMGVKNETEEEHDESLESKKKRRVLSLRLNCEAVIAAWGNLKSPWTNGERPDFDPDQPWPNSMAVCGVSYGHTCGEYGVSTAAMVDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPFAQPTLPIISIN

Homology

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BLAST of Lsi08G004090 vs. ExPASy Swiss-Prot
Match: Q8RWD0 (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE=1 SV=2)

HSP 1 Score: 256.1 bits (653), Expect = 5.7e-67
Identity = 181/418 (43.30%), Postives = 236/418 (56.46%), Query Frame = 0


Query: 5   KSIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLRLNSA 64
           KS+ANAVG KTARACDSCV++RARWYCAADDAFLCQSCDS VHSANPLARRH+R+RL +A
Sbjct: 3   KSLANAVGAKTARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTA 62

Query: 65  T----NNSKPSNYSP-----SWVSGFTRKPRTPRPRPK---------------------- 124
           +     +S  S+ SP     +W  GFTRK RTPR   K                      
Sbjct: 63  SPAVVKHSNHSSASPPHEVATWHHGFTRKARTPRGSGKKNNSSIFHDLVPDISIEDQTDN 122

Query: 125 ---SEELLSVVPETDDATSGSHEEEDQVSLYRVPNLEQAL-VDEADD-----------LD 184
               E+L+  VP  D   S     +        P +   L ++E +D            D
Sbjct: 123 YELEEQLICQVPVLDPLVSEQFLNDVVEPKIEFPMIRSGLMIEEEEDNAESCLNGFFPTD 182

Query: 185 VDLSDFAADVESLLGRNLESECFDMEGLGL-----VKMEEDYCRIGQQFEGEIDLMMGEA 244
           ++L +FAADVE+LLGR L++E + ME LGL      K+E+D      + E E++ +   +
Sbjct: 183 MELEEFAADVETLLGRGLDTESYAMEELGLSNSEMFKIEKD------EIEEEVEEIKAMS 242

Query: 245 FQLNFEEYEQDEEIKIPVVMGVKNE-----TEEEHDESLES----------KKKRRVLSL 304
             + F++  +D +  +P  +    E     +EEE  +++ES          ++ + VL L
Sbjct: 243 MDI-FDDDRKDVDGTVPFELSFDYESSHKTSEEEVMKNVESSGECVVKVKEEEHKNVLML 302

Query: 305 RLNCEAVIAAWGNLKSPWTNGERPDFDPD-QPWPN-SMAVCGVSYGHTCGEYG--VSTAA 353
           RLN ++VI+ WG    PW++GE P+ D D   WP  SM   G    H     G  + ++ 
Sbjct: 303 RLNYDSVISTWGGQGPPWSSGEPPERDMDISGWPAFSMVENGGESTHQKQYVGGCLPSSG 362

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BLAST of Lsi08G004090 vs. ExPASy Swiss-Prot
Match: Q8LG76 (Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2 SV=2)

HSP 1 Score: 235.7 bits (600), Expect = 7.9e-61
Identity = 175/405 (43.21%), Postives = 227/405 (56.05%), Query Frame = 0


Query: 5   KSIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLRLNSA 64
           KS+A+AVGGKTARACDSCV++RARWYCAADDAFLC +CD +VHSANPLARRH+R+RL SA
Sbjct: 3   KSLASAVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSA 62

Query: 65  T----NNSKPSNYSPSWVSGFTRKPRTPRPRPKSEELL--SVVPE--TDDATSGSHEEED 124
           +     ++ P  +  +W  GFTRK RTPR   KS  ++   +VPE  T+D    S+E E+
Sbjct: 63  SAGKYRHASPP-HQATWHQGFTRKARTPRGGKKSHTMVFHDLVPEMSTEDQAE-SYEVEE 122

Query: 125 QVSLYRVPNLEQAL------------------------VDEADD------------LDVD 184
           Q+ ++ VP +   +                         DE DD             D++
Sbjct: 123 QL-IFEVPVMNSMVEEQCFNQSLEKQNEFPMMPLSFKSSDEEDDDNAESCLNGLFPTDME 182

Query: 185 LSDFAADVESLLGRNLESECFDMEGLGL---VKMEEDYC--------RIGQQFEG----- 244
           L+ F ADVE+LLG   + E   +E LGL   +K+E++           +  Q EG     
Sbjct: 183 LAQFTADVETLLGGG-DREFHSIEELGLGEMLKIEKEEVEEEGVVTREVHDQDEGDETSP 242

Query: 245 -EIDLMMGEAFQLNFEEYEQDEEIKIPVVMGVKNETEEEHDESLESKKKRRVLSLRLNCE 304
            EI        +  F+E E+DE  K  V+  V      E    ++ +KK + L LRL+ E
Sbjct: 243 FEISFDYEYTHKTTFDEGEEDE--KEDVMKNVMEMGVNEMSGGIKEEKKEKALMLRLDYE 302

Query: 305 AVIAAWGNLKSPWTNGERPDFDPDQPW--PNSMAVCGVS---YGHTCGEYGVSTAAMVDG 344
           +VI+ WG    PWT     + D D      ++M   G     + H  G  G+      DG
Sbjct: 303 SVISTWGGQGIPWTARVPSEIDLDMVCFPTHTMGESGAEAHHHNHFRG-LGLHLGDAGDG 362

[Close]

BLAST of Lsi08G004090 vs. ExPASy Swiss-Prot
Match: Q9C9A9 (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 5.7e-43
Identity = 148/392 (37.76%), Postives = 195/392 (49.74%), Query Frame = 0


Query: 8   ANAVGGK-TARACDSCV-RKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLRLNSAT 67
           A+  G K  AR CD+C+ R RA WYC ADDAFLCQSCD+++HSAN LA+RH+R+RL S++
Sbjct: 10  ASVTGEKMAARGCDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRLQSSS 69

Query: 68  NNSKPSNYSPSWVSGFTRKPRTPRPRPKSEELLSVVPETDDATS--GSHEEEDQVSLYRV 127
                   +  W  GF RK RTPR +  + E L  +   D      G  E++   S   V
Sbjct: 70  PTETADKTTSVWYEGFRRKARTPRSKSCAFEKLLQIESNDPLVPELGGDEDDGFFSFSSV 129

Query: 128 PNLEQAL------VDEADDLDV-DLSDFAADVESL--------LGRNLESECFDMEG-LG 187
              E++L       D   D+ + D++ F    + +        LG  +E    D EG +G
Sbjct: 130 EETEESLNCCVPVFDPFSDMLIDDINGFCLVPDEVNNTTTNGELG-EVEKAIMDDEGFMG 189

Query: 188 LVKMEEDYCRIGQQFEGEIDLMMGEAFQLNF----------EEYEQDEEIKIPVVMGVKN 247
            V ++ D   +    E    L+  E   L F          EE +   EI    +  VK+
Sbjct: 190 FVPLDMDLEDLTMDVE---SLLEEEQLCLGFKEPNDVGVIKEENKVGFEINCKDLKRVKD 249

Query: 248 ETEEEHD-------------ESLESKKKRRVLSLRLNCEAVIAAWGNLKSPWTNGERPDF 307
           E EEE +             E+   K ++  L LRL+  AVI+AW N  SPW  G +P+ 
Sbjct: 250 EDEEEEEAKCENGGSKDSDREASNDKDRKTSLFLRLDYGAVISAWDNHGSPWKTGIKPE- 309

Query: 308 DPDQPWPNSMAVCGVSYGHTCGEYG--VSTAAMV-----------DGGREARVSRYREKR 344
                    M        H  G Y   +S+   V           DG REARV RY+EKR
Sbjct: 310 --------CMLGGNTCLPHVVGGYEKLMSSDGSVTRQQGRDGGGSDGEREARVLRYKEKR 369

[Close]

BLAST of Lsi08G004090 vs. ExPASy Swiss-Prot
Match: Q9M9B3 (Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 1.2e-29
Identity = 125/355 (35.21%), Postives = 165/355 (46.48%), Query Frame = 0


Query: 14  KTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQR--LRLNSATNNSKPS 73
           K  RAC+ C+ K A WYCA+DDAFLC  CD +VHSAN +A +H+R  LR N  +N+ +  
Sbjct: 16  KQPRACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTNEISNDVRGG 75

Query: 74  NYSPS-WVSGFTRKPRTPRPRPKSE---------------------ELLSVVPETDDATS 133
               S W SGF RK RTPR R + +                     E++  +PE +D   
Sbjct: 76  TTLTSVWHSGFRRKARTPRSRYEKKPQQKIDDERRREDPRVPEIGGEVMFFIPEAND--- 135

Query: 134 GSHEEEDQVSLYRVPNLEQALVDEADDLDVDLSDFAADVESLLGRNLESECFDMEGLGLV 193
                +D  SL  VP  E        ++   LS+     E+    N E E   ME L   
Sbjct: 136 -----DDMTSL--VPEFE-----GFTEMGFFLSNHNGTEETTKQFNFEEEADTMEDLYYN 195

Query: 194 KMEEDYCRIGQQFEGEIDLMMGEAFQLNFEEYEQDEEIKIPVVMGVKNETEEEHDESLES 253
             EED      + +G  +   G+      ++Y+         V+ V  +TEE  D   E+
Sbjct: 196 GEEED------KTDG-AEACPGQYLMSCKKDYDN--------VITVSEKTEEIED-CYEN 255

Query: 254 KKKRRVLSLRLNCEAVIAAWGNLKSPW-TNGERPDFDPDQPWPNSMAVCGVSYGHTCGEY 313
             +      RLN E VIAAW   +SP         F    P        G+       E 
Sbjct: 256 NARH-----RLNYENVIAAWDKQESPRDVKNNTSSFQLVPP--------GIEEKRVRSE- 314

Query: 314 GVSTAAMVDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRT 344
                      REARV RYR+KR+ RLF KKIRYEVRK+NA+KRPRMKGRFV+R+
Sbjct: 316 -----------REARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 314

[Close]

BLAST of Lsi08G004090 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 7.3e-14
Identity = 97/348 (27.87%), Postives = 154/348 (44.25%), Query Frame = 0


Query: 16  ARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLRLNSATNNSKPSNY-- 75
           A+ACD+C       YC AD A+LC SCD+ VH+AN LA RH+R+R+  +   +  + +  
Sbjct: 9   AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCK 68

Query: 76  --SPSWVSGFTRKPRTPRPRPKSEELLSVVPETD---DATSGSHEEEDQVSLYRVPNLEQ 135
             + S  +    +  +  P  +  + + ++P ++    +T+ +H  E  V+     + E 
Sbjct: 69  ADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVT-----DPEN 128

Query: 136 ALVDEADDLDVDLSDFAADVESLLGRNLESE---CFDMEGLGLVKMEEDYCRIGQQFEGE 195
            LV   ++ D D ++ A+ +    G+N  +        E L LV    DY    +QF  +
Sbjct: 129 RLVLGQEEEDEDEAEAASWLLPNSGKNSGNNNGFSIGDEFLNLV----DYSSSDKQFTDQ 188

Query: 196 IDLMMGEAFQL--NFEEYEQDEEIKIPVVMGVKNETEEEHDESLESKKKRRVLSLRLNCE 255
                   +QL  N  +    E+  +P+ + V     +E               L +NC 
Sbjct: 189 -----SNQYQLDCNVPQRSYGEDGVVPLQIEVSKGMYQEQQN----------FQLSINC- 248

Query: 256 AVIAAWGNLKSP------WTNGERPDFD--PDQPWPNSMAVCGVSYGHTCGEYGVSTAAM 315
               +WG L+S         N    D    P+    ++      S      +     A M
Sbjct: 249 ---GSWGALRSSNGSLSHMVNVSSMDLGVVPESTTSDATVSNPRSPKAVTDQPPYPPAQM 308

Query: 316 VD-GGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 343
           +    REARV RYREK++ R F K IRY  RK  AEKRPR+KGRF K+
Sbjct: 309 LSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKK 328

[Close]

BLAST of Lsi08G004090 vs. ExPASy TrEMBL
Match: A0A0A0K964 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G039540 PE=3 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 3.3e-126
Identity = 262/363 (72.18%), Postives = 291/363 (80.17%), Query Frame = 0


Query: 1   MMSRKSIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLR 60
           MMSRK+IANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCD+ VHSANPLARRHQRLR
Sbjct: 1   MMSRKNIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDTTVHSANPLARRHQRLR 60

Query: 61  LNSATNNSKPSNYSPSWVSGFTRKPRTPRPRPKSEELL--SVVPETDDATSGSHEEEDQV 120
           LN+  +NS P N SPSWVSGFTRKPRTPRPRPKS +L+  SVVPETDDATS  +E  +  
Sbjct: 61  LNA--SNSSPLN-SPSWVSGFTRKPRTPRPRPKSNDLIHVSVVPETDDATSHENEHLEDQ 120

Query: 121 SLYRVPNLEQALVDEADDLDVDLSDFAADVESLLGRNLESECFDM-EGLGLVKMEEDYCR 180
            LYRVPN           LDV++SDF  DVE    RNLE E FD+ E LGLVK+EED  R
Sbjct: 121 LLYRVPN-----------LDVNVSDFGGDVE----RNLEREWFDIEEELGLVKVEEDCWR 180

Query: 181 IGQQFEGEIDLMMGEAFQLNFEEYEQDEEIKI-PVVMGVKNET-EEEHDES-LESKKKRR 240
           IG+ F+ +         Q++F  +   EEIK+ P+V+GVKNE  E+E DES +  K KRR
Sbjct: 181 IGEGFDSD---------QVDF--FMDFEEIKMPPLVVGVKNERHEDEGDESGITDKNKRR 240

Query: 241 VLSLRLNCEAVIAAWGNLKSPWTNGERPDFDPDQPWPNSMAVCGVSYGHTCGEYGVSTAA 300
           VLSLRL+CEAVIAAWGNL+SPWTNG+RPDFDPDQPWPNSM +C V YG  CGEYG  TAA
Sbjct: 241 VLSLRLDCEAVIAAWGNLQSPWTNGQRPDFDPDQPWPNSMDLCEVRYGQRCGEYGFRTAA 300

Query: 301 MVDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPFA-QPTLPII 357
           + DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPFA QPTLPII
Sbjct: 301 IGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPFAPQPTLPII 334

[Close]

BLAST of Lsi08G004090 vs. ExPASy TrEMBL
Match: A0A5D3CIY1 (Zinc finger protein CONSTANS-LIKE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1827G00410 PE=3 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 4.4e-123
Identity = 255/365 (69.86%), Postives = 284/365 (77.81%), Query Frame = 0


Query: 1   MMSRKSIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLR 60
           MMSRK+IANAVGGKTARACDSCVR+RARWYCAADDAFLCQSCD+ VHSANPLARRHQRLR
Sbjct: 1   MMSRKNIANAVGGKTARACDSCVRRRARWYCAADDAFLCQSCDTTVHSANPLARRHQRLR 60

Query: 61  LNSATNNSKPSNYSPSWVSGFTRKPRTPRPRPKSEELL--SVVPETDDATSGSHEEEDQV 120
           LNS   ++ P+  SPSWVSGFTRKPRTPRPRPKS +L+  SVVPETDDATS   E  +  
Sbjct: 61  LNS---SNSPTLNSPSWVSGFTRKPRTPRPRPKSNDLIHVSVVPETDDATSHEDEHLEDQ 120

Query: 121 SLYRVPNLEQALVDEADDLDVDLSDFAADVESLLGRNLESECFDM-EGLGLVKMEEDYCR 180
            LYRVP            LDV++SDF  DVE    +NLE E FD+ E LG VK+EE   R
Sbjct: 121 LLYRVPT-----------LDVNVSDFGGDVE----KNLEREWFDIEEELGFVKVEESCWR 180

Query: 181 IGQQFEG-EIDLMMGEAFQLNFEEYEQDEEIKI-PVVMGVKNETEE--EHDES-LESKKK 240
           IG+ F+  ++D +M              EEIKI P+V+GVKNE  E  E DES + +K K
Sbjct: 181 IGEGFDSDQVDFLM------------DFEEIKIPPLVVGVKNERHEDNEDDESGITNKNK 240

Query: 241 RRVLSLRLNCEAVIAAWGNLKSPWTNGERPDFDPDQPWPNSMAVCGVSYGHTCGEYGVST 300
           RRVLSLRL+CEAVIAAWGNL+SPWTNG+RPDFDPDQPWPNSM VC V YG  CGE+G+ T
Sbjct: 241 RRVLSLRLDCEAVIAAWGNLQSPWTNGQRPDFDPDQPWPNSMEVCEVRYGQRCGEHGLRT 300

Query: 301 AAMVDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPF-AQPTLP 357
           AAM DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPF  QPTLP
Sbjct: 301 AAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPFPPQPTLP 335

[Close]

BLAST of Lsi08G004090 vs. ExPASy TrEMBL
Match: E5GC84 (Zinc finger (B-box type) family protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 4.4e-123
Identity = 255/365 (69.86%), Postives = 284/365 (77.81%), Query Frame = 0


Query: 1   MMSRKSIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLR 60
           MMSRK+IANAVGGKTARACDSCVR+RARWYCAADDAFLCQSCD+ VHSANPLARRHQRLR
Sbjct: 1   MMSRKNIANAVGGKTARACDSCVRRRARWYCAADDAFLCQSCDTTVHSANPLARRHQRLR 60

Query: 61  LNSATNNSKPSNYSPSWVSGFTRKPRTPRPRPKSEELL--SVVPETDDATSGSHEEEDQV 120
           LNS   ++ P+  SPSWVSGFTRKPRTPRPRPKS +L+  SVVPETDDATS   E  +  
Sbjct: 61  LNS---SNSPTLNSPSWVSGFTRKPRTPRPRPKSNDLIHVSVVPETDDATSHEDEHLEDQ 120

Query: 121 SLYRVPNLEQALVDEADDLDVDLSDFAADVESLLGRNLESECFDM-EGLGLVKMEEDYCR 180
            LYRVP            LDV++SDF  DVE    +NLE E FD+ E LG VK+EE   R
Sbjct: 121 LLYRVPT-----------LDVNVSDFGGDVE----KNLEREWFDIEEELGFVKVEESCWR 180

Query: 181 IGQQFEG-EIDLMMGEAFQLNFEEYEQDEEIKI-PVVMGVKNETEE--EHDES-LESKKK 240
           IG+ F+  ++D +M              EEIKI P+V+GVKNE  E  E DES + +K K
Sbjct: 181 IGEGFDSDQVDFLM------------DFEEIKIPPLVVGVKNERHEDNEDDESGITNKNK 240

Query: 241 RRVLSLRLNCEAVIAAWGNLKSPWTNGERPDFDPDQPWPNSMAVCGVSYGHTCGEYGVST 300
           RRVLSLRL+CEAVIAAWGNL+SPWTNG+RPDFDPDQPWPNSM VC V YG  CGE+G+ T
Sbjct: 241 RRVLSLRLDCEAVIAAWGNLQSPWTNGQRPDFDPDQPWPNSMEVCEVRYGQRCGEHGLRT 300

Query: 301 AAMVDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPF-AQPTLP 357
           AAM DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPF  QPTLP
Sbjct: 301 AAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPFPPQPTLP 335

[Close]

BLAST of Lsi08G004090 vs. ExPASy TrEMBL
Match: A0A1S3BD97 (zinc finger protein CONSTANS-LIKE 6 OS=Cucumis melo OX=3656 GN=LOC103488625 PE=3 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 4.4e-123
Identity = 255/365 (69.86%), Postives = 284/365 (77.81%), Query Frame = 0


Query: 1   MMSRKSIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLR 60
           MMSRK+IANAVGGKTARACDSCVR+RARWYCAADDAFLCQSCD+ VHSANPLARRHQRLR
Sbjct: 1   MMSRKNIANAVGGKTARACDSCVRRRARWYCAADDAFLCQSCDTTVHSANPLARRHQRLR 60

Query: 61  LNSATNNSKPSNYSPSWVSGFTRKPRTPRPRPKSEELL--SVVPETDDATSGSHEEEDQV 120
           LNS   ++ P+  SPSWVSGFTRKPRTPRPRPKS +L+  SVVPETDDATS   E  +  
Sbjct: 61  LNS---SNSPTLNSPSWVSGFTRKPRTPRPRPKSNDLIHVSVVPETDDATSHEDEHLEDQ 120

Query: 121 SLYRVPNLEQALVDEADDLDVDLSDFAADVESLLGRNLESECFDM-EGLGLVKMEEDYCR 180
            LYRVP            LDV++SDF  DVE    +NLE E FD+ E LG VK+EE   R
Sbjct: 121 LLYRVPT-----------LDVNVSDFGGDVE----KNLEREWFDIEEELGFVKVEESCWR 180

Query: 181 IGQQFEG-EIDLMMGEAFQLNFEEYEQDEEIKI-PVVMGVKNETEE--EHDES-LESKKK 240
           IG+ F+  ++D +M              EEIKI P+V+GVKNE  E  E DES + +K K
Sbjct: 181 IGEGFDSDQVDFLM------------DFEEIKIPPLVVGVKNERHEDNEDDESGITNKNK 240

Query: 241 RRVLSLRLNCEAVIAAWGNLKSPWTNGERPDFDPDQPWPNSMAVCGVSYGHTCGEYGVST 300
           RRVLSLRL+CEAVIAAWGNL+SPWTNG+RPDFDPDQPWPNSM VC V YG  CGE+G+ T
Sbjct: 241 RRVLSLRLDCEAVIAAWGNLQSPWTNGQRPDFDPDQPWPNSMEVCEVRYGQRCGEHGLRT 300

Query: 301 AAMVDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPF-AQPTLP 357
           AAM DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPF  QPTLP
Sbjct: 301 AAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPFPPQPTLP 335

[Close]

BLAST of Lsi08G004090 vs. ExPASy TrEMBL
Match: A0A6J1FIQ3 (zinc finger protein CONSTANS-LIKE 16-like OS=Cucurbita moschata OX=3662 GN=LOC111444644 PE=3 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 1.4e-116
Identity = 250/375 (66.67%), Postives = 276/375 (73.60%), Query Frame = 0


Query: 1   MMSRKSIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLR 60
           M ++ SIANAVGGKTARACDSC RKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLR
Sbjct: 1   MSTKSSIANAVGGKTARACDSCFRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLR 60

Query: 61  LNSAT-NNSKPSNYSPSWVSGFTRKPRTPR--PRPKSEELL-----SVVPETDDATSGSH 120
           LNS T +NSKP   SPSWVSGFTRKPRTPR  PRPKS++LL     S+VPE DDATS   
Sbjct: 61  LNSPTSSNSKPP--SPSWVSGFTRKPRTPRPPPRPKSDDLLSNPSFSLVPEADDATSHED 120

Query: 121 EEEDQVSLYRVPNLEQALVDEADDLDVDLSDFAADVESLLGRNLESECFDMEGLGLVKME 180
            EED + LYRVP  +  L  +    D+DL+DFA D        LE +CF+MEGLGLVK+E
Sbjct: 121 NEEDHL-LYRVPTFDPFLPSD----DLDLADFATD--------LERQCFEMEGLGLVKVE 180

Query: 181 E-------DYCRIGQQFEGEIDLMMGEAFQLNFEEYEQDEEIKIPVVMGVKNE-----TE 240
           +       DYCR    FE ++DLM  E F+L            IP VM VKNE      E
Sbjct: 181 DLHEQQEADYCRAQHPFEAQMDLMQ-EPFEL------------IP-VMDVKNERQEDCAE 240

Query: 241 EEHDESLESKKKRRVLSLRLNCEAVIAAWGNLKSPWTNGERPDFDPDQPWPNSMAVCGVS 300
           E  DES   +K R  ++LRL+CEAVIAAWG+ KSPWT GERPD DPDQPWP+ MA CGV 
Sbjct: 241 ETEDESKTQRKGR--VTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFCGVR 300

Query: 301 YGHTCGEYGVSTAAMVDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFV 356
            G  CGEYG+STAAM DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFV
Sbjct: 301 NGQGCGEYGMSTAAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFV 344

[Close]

BLAST of Lsi08G004090 vs. NCBI nr
Match: XP_038884057.1 (zinc finger protein CONSTANS-LIKE 16-like [Benincasa hispida])

HSP 1 Score: 564.7 bits (1454), Expect = 5.7e-157
Identity = 297/362 (82.04%), Postives = 323/362 (89.23%), Query Frame = 0


Query: 1   MMSRKSIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLR 60
           MMS+KSIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCD+AVHSANPLARRHQRLR
Sbjct: 1   MMSKKSIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDTAVHSANPLARRHQRLR 60

Query: 61  LNSATNNSKPSNYSPSWVSGFTRKPRTPRPRPKSEE-LLSVVPETDDATSGSHEEEDQVS 120
           LNSATNNS     +PSWVSGFTRKPRTPRPRPKSE+ L+SVVPETDDA SGS E+++  +
Sbjct: 61  LNSATNNS-----TPSWVSGFTRKPRTPRPRPKSEDILISVVPETDDAVSGSQEDQEDQA 120

Query: 121 LYRVPNLEQALVDEADDLDVDLSDFAADVESLLGRNLESECFDMEGLGLVKMEEDYCRIG 180
           LYRVP    +LVD+ D+LD+DLSDFAADVESLLGRNLE+ECFDMEGLGLVK+EEDY R+G
Sbjct: 121 LYRVP----SLVDDNDELDLDLSDFAADVESLLGRNLENECFDMEGLGLVKVEEDYWRVG 180

Query: 181 QQFEGEIDLMMGEAFQLNFEEYEQ--DEEIKIPVVMGVKN--ETEEEHDESLES-KKKRR 240
           + FE E+DLM+GE  ++      Q   EE+KIPVV+GVKN  E EEE +ESLES KKKRR
Sbjct: 181 EGFESEVDLMVGEPMRMPMPMPMQFNIEEMKIPVVVGVKNEREEEEEEEESLESKKKKRR 240

Query: 241 VLSLRLNCEAVIAAWGNLKSPWTNGERPDFDPDQPWPNSMAVCGVSYGHTCGEYGVSTAA 300
           VLSLRL+CEAVI AWGNLKSPWTNGERPDFDPDQPWPNSM VCGVSYGHTCGEYGV+ AA
Sbjct: 241 VLSLRLDCEAVIEAWGNLKSPWTNGERPDFDPDQPWPNSMVVCGVSYGHTCGEYGVNMAA 300

Query: 301 MVDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPFAQPTLPIIS 357
           M DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPFAQ TLPIIS
Sbjct: 301 MGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPFAQSTLPIIS 353

[Close]

BLAST of Lsi08G004090 vs. NCBI nr
Match: XP_004140861.1 (zinc finger protein CONSTANS-LIKE 6 [Cucumis sativus] >KGN45963.1 hypothetical protein Csa_005010 [Cucumis sativus])

HSP 1 Score: 461.5 bits (1186), Expect = 6.8e-126
Identity = 262/363 (72.18%), Postives = 291/363 (80.17%), Query Frame = 0


Query: 1   MMSRKSIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLR 60
           MMSRK+IANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCD+ VHSANPLARRHQRLR
Sbjct: 1   MMSRKNIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDTTVHSANPLARRHQRLR 60

Query: 61  LNSATNNSKPSNYSPSWVSGFTRKPRTPRPRPKSEELL--SVVPETDDATSGSHEEEDQV 120
           LN+  +NS P N SPSWVSGFTRKPRTPRPRPKS +L+  SVVPETDDATS  +E  +  
Sbjct: 61  LNA--SNSSPLN-SPSWVSGFTRKPRTPRPRPKSNDLIHVSVVPETDDATSHENEHLEDQ 120

Query: 121 SLYRVPNLEQALVDEADDLDVDLSDFAADVESLLGRNLESECFDM-EGLGLVKMEEDYCR 180
            LYRVPN           LDV++SDF  DVE    RNLE E FD+ E LGLVK+EED  R
Sbjct: 121 LLYRVPN-----------LDVNVSDFGGDVE----RNLEREWFDIEEELGLVKVEEDCWR 180

Query: 181 IGQQFEGEIDLMMGEAFQLNFEEYEQDEEIKI-PVVMGVKNET-EEEHDES-LESKKKRR 240
           IG+ F+ +         Q++F  +   EEIK+ P+V+GVKNE  E+E DES +  K KRR
Sbjct: 181 IGEGFDSD---------QVDF--FMDFEEIKMPPLVVGVKNERHEDEGDESGITDKNKRR 240

Query: 241 VLSLRLNCEAVIAAWGNLKSPWTNGERPDFDPDQPWPNSMAVCGVSYGHTCGEYGVSTAA 300
           VLSLRL+CEAVIAAWGNL+SPWTNG+RPDFDPDQPWPNSM +C V YG  CGEYG  TAA
Sbjct: 241 VLSLRLDCEAVIAAWGNLQSPWTNGQRPDFDPDQPWPNSMDLCEVRYGQRCGEYGFRTAA 300

Query: 301 MVDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPFA-QPTLPII 357
           + DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPFA QPTLPII
Sbjct: 301 IGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPFAPQPTLPII 334

[Close]

BLAST of Lsi08G004090 vs. NCBI nr
Match: XP_008445668.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 6 [Cucumis melo] >ADN34083.1 zinc finger (B-box type) family protein [Cucumis melo subsp. melo] >KAA0063912.1 zinc finger protein CONSTANS-LIKE 6 [Cucumis melo var. makuwa] >TYK11320.1 zinc finger protein CONSTANS-LIKE 6 [Cucumis melo var. makuwa])

HSP 1 Score: 451.1 bits (1159), Expect = 9.2e-123
Identity = 255/365 (69.86%), Postives = 284/365 (77.81%), Query Frame = 0


Query: 1   MMSRKSIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLR 60
           MMSRK+IANAVGGKTARACDSCVR+RARWYCAADDAFLCQSCD+ VHSANPLARRHQRLR
Sbjct: 1   MMSRKNIANAVGGKTARACDSCVRRRARWYCAADDAFLCQSCDTTVHSANPLARRHQRLR 60

Query: 61  LNSATNNSKPSNYSPSWVSGFTRKPRTPRPRPKSEELL--SVVPETDDATSGSHEEEDQV 120
           LNS   ++ P+  SPSWVSGFTRKPRTPRPRPKS +L+  SVVPETDDATS   E  +  
Sbjct: 61  LNS---SNSPTLNSPSWVSGFTRKPRTPRPRPKSNDLIHVSVVPETDDATSHEDEHLEDQ 120

Query: 121 SLYRVPNLEQALVDEADDLDVDLSDFAADVESLLGRNLESECFDM-EGLGLVKMEEDYCR 180
            LYRVP            LDV++SDF  DVE    +NLE E FD+ E LG VK+EE   R
Sbjct: 121 LLYRVPT-----------LDVNVSDFGGDVE----KNLEREWFDIEEELGFVKVEESCWR 180

Query: 181 IGQQFEG-EIDLMMGEAFQLNFEEYEQDEEIKI-PVVMGVKNETEE--EHDES-LESKKK 240
           IG+ F+  ++D +M              EEIKI P+V+GVKNE  E  E DES + +K K
Sbjct: 181 IGEGFDSDQVDFLM------------DFEEIKIPPLVVGVKNERHEDNEDDESGITNKNK 240

Query: 241 RRVLSLRLNCEAVIAAWGNLKSPWTNGERPDFDPDQPWPNSMAVCGVSYGHTCGEYGVST 300
           RRVLSLRL+CEAVIAAWGNL+SPWTNG+RPDFDPDQPWPNSM VC V YG  CGE+G+ T
Sbjct: 241 RRVLSLRLDCEAVIAAWGNLQSPWTNGQRPDFDPDQPWPNSMEVCEVRYGQRCGEHGLRT 300

Query: 301 AAMVDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPF-AQPTLP 357
           AAM DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPF  QPTLP
Sbjct: 301 AAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTPFPPQPTLP 335

[Close]

BLAST of Lsi08G004090 vs. NCBI nr
Match: XP_022938378.1 (zinc finger protein CONSTANS-LIKE 16-like [Cucurbita moschata])

HSP 1 Score: 429.5 bits (1103), Expect = 2.9e-116
Identity = 250/375 (66.67%), Postives = 276/375 (73.60%), Query Frame = 0


Query: 1   MMSRKSIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLR 60
           M ++ SIANAVGGKTARACDSC RKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLR
Sbjct: 1   MSTKSSIANAVGGKTARACDSCFRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLR 60

Query: 61  LNSAT-NNSKPSNYSPSWVSGFTRKPRTPR--PRPKSEELL-----SVVPETDDATSGSH 120
           LNS T +NSKP   SPSWVSGFTRKPRTPR  PRPKS++LL     S+VPE DDATS   
Sbjct: 61  LNSPTSSNSKPP--SPSWVSGFTRKPRTPRPPPRPKSDDLLSNPSFSLVPEADDATSHED 120

Query: 121 EEEDQVSLYRVPNLEQALVDEADDLDVDLSDFAADVESLLGRNLESECFDMEGLGLVKME 180
            EED + LYRVP  +  L  +    D+DL+DFA D        LE +CF+MEGLGLVK+E
Sbjct: 121 NEEDHL-LYRVPTFDPFLPSD----DLDLADFATD--------LERQCFEMEGLGLVKVE 180

Query: 181 E-------DYCRIGQQFEGEIDLMMGEAFQLNFEEYEQDEEIKIPVVMGVKNE-----TE 240
           +       DYCR    FE ++DLM  E F+L            IP VM VKNE      E
Sbjct: 181 DLHEQQEADYCRAQHPFEAQMDLMQ-EPFEL------------IP-VMDVKNERQEDCAE 240

Query: 241 EEHDESLESKKKRRVLSLRLNCEAVIAAWGNLKSPWTNGERPDFDPDQPWPNSMAVCGVS 300
           E  DES   +K R  ++LRL+CEAVIAAWG+ KSPWT GERPD DPDQPWP+ MA CGV 
Sbjct: 241 ETEDESKTQRKGR--VTLRLDCEAVIAAWGDDKSPWTTGERPDLDPDQPWPHFMAFCGVR 300

Query: 301 YGHTCGEYGVSTAAMVDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFV 356
            G  CGEYG+STAAM DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFV
Sbjct: 301 NGQGCGEYGMSTAAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFV 344

[Close]

BLAST of Lsi08G004090 vs. NCBI nr
Match: XP_022971763.1 (zinc finger protein CONSTANS-LIKE 16-like [Cucurbita maxima])

HSP 1 Score: 425.6 bits (1093), Expect = 4.1e-115
Identity = 254/395 (64.30%), Postives = 285/395 (72.15%), Query Frame = 0


Query: 2   MSRKSIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLRL 61
           M  K+IANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLRL
Sbjct: 1   MLTKNIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLRL 60

Query: 62  NSATNNSKPSNYSPSWVSGFTRKPRTPRPRPKSEELL--------SVVPETDDATSGSHE 121
           N+A  +SKP   SPSWVSGFTRKPRTPRPR KS++++        S+VPE DD T     
Sbjct: 61  NTA--SSKPP--SPSWVSGFTRKPRTPRPRRKSDDVVPLLSNPSFSLVPEADDGTWVEEN 120

Query: 122 EEDQVSLYRVPNLE---------QALVDEADDL------DVDLSDFAADVESLLGRNLES 181
           EED + LYRVP  E         +++ DEA +       D+DL +FAADVESLLGRNLES
Sbjct: 121 EEDHL-LYRVPTFEPFVEETQSSKSMGDEAGNFHGFLPSDLDLEEFAADVESLLGRNLES 180

Query: 182 ECFDMEGLGL-------------VKMEED-------YCRIGQQFEGEIDLMMGEAFQLNF 241
           ECFDMEGLG+             VK EED        CR   + E E+DLM  E F+LNF
Sbjct: 181 ECFDMEGLGIGLSIEKDDTSTRRVKGEEDGEEADRGNCRFENELEAEVDLMR-EPFELNF 240

Query: 242 EEYEQDEEIKIPVVMGVKNETEEEHDESLESK-KKRRVLSLRLNCEAVIAAWGNLKSPWT 301
           EEYEQ  E+K   ++GVKNE EEE  +  E K KK+R + L+L+C+AVIAAWGN KSPWT
Sbjct: 241 EEYEQ--ELK---MVGVKNEREEEDCKVEEDKVKKKRKVGLQLDCDAVIAAWGNDKSPWT 300

Query: 302 NGERPDFDPDQPWPNSMAVCGVSYGHTCGEYGVSTAAMVDGGREARVSRYREKRRTRLFS 353
            GERPDF+PD  WP+ MA+CGV     CGEYG       DGGREARVSRYREKRRTRLFS
Sbjct: 301 TGERPDFEPDSSWPHCMAICGV----RCGEYGGGR----DGGREARVSRYREKRRTRLFS 360

[Close]

BLAST of Lsi08G004090 vs. TAIR 10
Match: AT1G25440.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 256.1 bits (653), Expect = 4.0e-68
Identity = 181/418 (43.30%), Postives = 236/418 (56.46%), Query Frame = 0


Query: 5   KSIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLRLNSA 64
           KS+ANAVG KTARACDSCV++RARWYCAADDAFLCQSCDS VHSANPLARRH+R+RL +A
Sbjct: 3   KSLANAVGAKTARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTA 62

Query: 65  T----NNSKPSNYSP-----SWVSGFTRKPRTPRPRPK---------------------- 124
           +     +S  S+ SP     +W  GFTRK RTPR   K                      
Sbjct: 63  SPAVVKHSNHSSASPPHEVATWHHGFTRKARTPRGSGKKNNSSIFHDLVPDISIEDQTDN 122

Query: 125 ---SEELLSVVPETDDATSGSHEEEDQVSLYRVPNLEQAL-VDEADD-----------LD 184
               E+L+  VP  D   S     +        P +   L ++E +D            D
Sbjct: 123 YELEEQLICQVPVLDPLVSEQFLNDVVEPKIEFPMIRSGLMIEEEEDNAESCLNGFFPTD 182

Query: 185 VDLSDFAADVESLLGRNLESECFDMEGLGL-----VKMEEDYCRIGQQFEGEIDLMMGEA 244
           ++L +FAADVE+LLGR L++E + ME LGL      K+E+D      + E E++ +   +
Sbjct: 183 MELEEFAADVETLLGRGLDTESYAMEELGLSNSEMFKIEKD------EIEEEVEEIKAMS 242

Query: 245 FQLNFEEYEQDEEIKIPVVMGVKNE-----TEEEHDESLES----------KKKRRVLSL 304
             + F++  +D +  +P  +    E     +EEE  +++ES          ++ + VL L
Sbjct: 243 MDI-FDDDRKDVDGTVPFELSFDYESSHKTSEEEVMKNVESSGECVVKVKEEEHKNVLML 302

Query: 305 RLNCEAVIAAWGNLKSPWTNGERPDFDPD-QPWPN-SMAVCGVSYGHTCGEYG--VSTAA 353
           RLN ++VI+ WG    PW++GE P+ D D   WP  SM   G    H     G  + ++ 
Sbjct: 303 RLNYDSVISTWGGQGPPWSSGEPPERDMDISGWPAFSMVENGGESTHQKQYVGGCLPSSG 362

[Close]

BLAST of Lsi08G004090 vs. TAIR 10
Match: AT1G68520.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 235.7 bits (600), Expect = 5.6e-62
Identity = 175/405 (43.21%), Postives = 227/405 (56.05%), Query Frame = 0


Query: 5   KSIANAVGGKTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLRLNSA 64
           KS+A+AVGGKTARACDSCV++RARWYCAADDAFLC +CD +VHSANPLARRH+R+RL SA
Sbjct: 3   KSLASAVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSA 62

Query: 65  T----NNSKPSNYSPSWVSGFTRKPRTPRPRPKSEELL--SVVPE--TDDATSGSHEEED 124
           +     ++ P  +  +W  GFTRK RTPR   KS  ++   +VPE  T+D    S+E E+
Sbjct: 63  SAGKYRHASPP-HQATWHQGFTRKARTPRGGKKSHTMVFHDLVPEMSTEDQAE-SYEVEE 122

Query: 125 QVSLYRVPNLEQAL------------------------VDEADD------------LDVD 184
           Q+ ++ VP +   +                         DE DD             D++
Sbjct: 123 QL-IFEVPVMNSMVEEQCFNQSLEKQNEFPMMPLSFKSSDEEDDDNAESCLNGLFPTDME 182

Query: 185 LSDFAADVESLLGRNLESECFDMEGLGL---VKMEEDYC--------RIGQQFEG----- 244
           L+ F ADVE+LLG   + E   +E LGL   +K+E++           +  Q EG     
Sbjct: 183 LAQFTADVETLLGGG-DREFHSIEELGLGEMLKIEKEEVEEEGVVTREVHDQDEGDETSP 242

Query: 245 -EIDLMMGEAFQLNFEEYEQDEEIKIPVVMGVKNETEEEHDESLESKKKRRVLSLRLNCE 304
            EI        +  F+E E+DE  K  V+  V      E    ++ +KK + L LRL+ E
Sbjct: 243 FEISFDYEYTHKTTFDEGEEDE--KEDVMKNVMEMGVNEMSGGIKEEKKEKALMLRLDYE 302

Query: 305 AVIAAWGNLKSPWTNGERPDFDPDQPW--PNSMAVCGVS---YGHTCGEYGVSTAAMVDG 344
           +VI+ WG    PWT     + D D      ++M   G     + H  G  G+      DG
Sbjct: 303 SVISTWGGQGIPWTARVPSEIDLDMVCFPTHTMGESGAEAHHHNHFRG-LGLHLGDAGDG 362

[Close]

BLAST of Lsi08G004090 vs. TAIR 10
Match: AT1G73870.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 176.4 bits (446), Expect = 4.1e-44
Identity = 148/392 (37.76%), Postives = 195/392 (49.74%), Query Frame = 0


Query: 8   ANAVGGK-TARACDSCV-RKRARWYCAADDAFLCQSCDSAVHSANPLARRHQRLRLNSAT 67
           A+  G K  AR CD+C+ R RA WYC ADDAFLCQSCD+++HSAN LA+RH+R+RL S++
Sbjct: 10  ASVTGEKMAARGCDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRLQSSS 69

Query: 68  NNSKPSNYSPSWVSGFTRKPRTPRPRPKSEELLSVVPETDDATS--GSHEEEDQVSLYRV 127
                   +  W  GF RK RTPR +  + E L  +   D      G  E++   S   V
Sbjct: 70  PTETADKTTSVWYEGFRRKARTPRSKSCAFEKLLQIESNDPLVPELGGDEDDGFFSFSSV 129

Query: 128 PNLEQAL------VDEADDLDV-DLSDFAADVESL--------LGRNLESECFDMEG-LG 187
              E++L       D   D+ + D++ F    + +        LG  +E    D EG +G
Sbjct: 130 EETEESLNCCVPVFDPFSDMLIDDINGFCLVPDEVNNTTTNGELG-EVEKAIMDDEGFMG 189

Query: 188 LVKMEEDYCRIGQQFEGEIDLMMGEAFQLNF----------EEYEQDEEIKIPVVMGVKN 247
            V ++ D   +    E    L+  E   L F          EE +   EI    +  VK+
Sbjct: 190 FVPLDMDLEDLTMDVE---SLLEEEQLCLGFKEPNDVGVIKEENKVGFEINCKDLKRVKD 249

Query: 248 ETEEEHD-------------ESLESKKKRRVLSLRLNCEAVIAAWGNLKSPWTNGERPDF 307
           E EEE +             E+   K ++  L LRL+  AVI+AW N  SPW  G +P+ 
Sbjct: 250 EDEEEEEAKCENGGSKDSDREASNDKDRKTSLFLRLDYGAVISAWDNHGSPWKTGIKPE- 309

Query: 308 DPDQPWPNSMAVCGVSYGHTCGEYG--VSTAAMV-----------DGGREARVSRYREKR 344
                    M        H  G Y   +S+   V           DG REARV RY+EKR
Sbjct: 310 --------CMLGGNTCLPHVVGGYEKLMSSDGSVTRQQGRDGGGSDGEREARVLRYKEKR 369

[Close]

BLAST of Lsi08G004090 vs. TAIR 10
Match: AT1G49130.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 132.1 bits (331), Expect = 8.8e-31
Identity = 125/355 (35.21%), Postives = 165/355 (46.48%), Query Frame = 0


Query: 14  KTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQR--LRLNSATNNSKPS 73
           K  RAC+ C+ K A WYCA+DDAFLC  CD +VHSAN +A +H+R  LR N  +N+ +  
Sbjct: 23  KQPRACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTNEISNDVRGG 82

Query: 74  NYSPS-WVSGFTRKPRTPRPRPKSE---------------------ELLSVVPETDDATS 133
               S W SGF RK RTPR R + +                     E++  +PE +D   
Sbjct: 83  TTLTSVWHSGFRRKARTPRSRYEKKPQQKIDDERRREDPRVPEIGGEVMFFIPEAND--- 142

Query: 134 GSHEEEDQVSLYRVPNLEQALVDEADDLDVDLSDFAADVESLLGRNLESECFDMEGLGLV 193
                +D  SL  VP  E        ++   LS+     E+    N E E   ME L   
Sbjct: 143 -----DDMTSL--VPEFE-----GFTEMGFFLSNHNGTEETTKQFNFEEEADTMEDLYYN 202

Query: 194 KMEEDYCRIGQQFEGEIDLMMGEAFQLNFEEYEQDEEIKIPVVMGVKNETEEEHDESLES 253
             EED      + +G  +   G+      ++Y+         V+ V  +TEE  D   E+
Sbjct: 203 GEEED------KTDG-AEACPGQYLMSCKKDYDN--------VITVSEKTEEIED-CYEN 262

Query: 254 KKKRRVLSLRLNCEAVIAAWGNLKSPW-TNGERPDFDPDQPWPNSMAVCGVSYGHTCGEY 313
             +      RLN E VIAAW   +SP         F    P        G+       E 
Sbjct: 263 NARH-----RLNYENVIAAWDKQESPRDVKNNTSSFQLVPP--------GIEEKRVRSE- 321

Query: 314 GVSTAAMVDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRT 344
                      REARV RYR+KR+ RLF KKIRYEVRK+NA+KRPRMKGRFV+R+
Sbjct: 323 -----------REARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 321

[Close]

BLAST of Lsi08G004090 vs. TAIR 10
Match: AT1G49130.2 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 132.1 bits (331), Expect = 8.8e-31
Identity = 125/355 (35.21%), Postives = 165/355 (46.48%), Query Frame = 0


Query: 14  KTARACDSCVRKRARWYCAADDAFLCQSCDSAVHSANPLARRHQR--LRLNSATNNSKPS 73
           K  RAC+ C+ K A WYCA+DDAFLC  CD +VHSAN +A +H+R  LR N  +N+ +  
Sbjct: 16  KQPRACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTNEISNDVRGG 75

Query: 74  NYSPS-WVSGFTRKPRTPRPRPKSE---------------------ELLSVVPETDDATS 133
               S W SGF RK RTPR R + +                     E++  +PE +D   
Sbjct: 76  TTLTSVWHSGFRRKARTPRSRYEKKPQQKIDDERRREDPRVPEIGGEVMFFIPEAND--- 135

Query: 134 GSHEEEDQVSLYRVPNLEQALVDEADDLDVDLSDFAADVESLLGRNLESECFDMEGLGLV 193
                +D  SL  VP  E        ++   LS+     E+    N E E   ME L   
Sbjct: 136 -----DDMTSL--VPEFE-----GFTEMGFFLSNHNGTEETTKQFNFEEEADTMEDLYYN 195

Query: 194 KMEEDYCRIGQQFEGEIDLMMGEAFQLNFEEYEQDEEIKIPVVMGVKNETEEEHDESLES 253
             EED      + +G  +   G+      ++Y+         V+ V  +TEE  D   E+
Sbjct: 196 GEEED------KTDG-AEACPGQYLMSCKKDYDN--------VITVSEKTEEIED-CYEN 255

Query: 254 KKKRRVLSLRLNCEAVIAAWGNLKSPW-TNGERPDFDPDQPWPNSMAVCGVSYGHTCGEY 313
             +      RLN E VIAAW   +SP         F    P        G+       E 
Sbjct: 256 NARH-----RLNYENVIAAWDKQESPRDVKNNTSSFQLVPP--------GIEEKRVRSE- 314

Query: 314 GVSTAAMVDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRT 344
                      REARV RYR+KR+ RLF KKIRYEVRK+NA+KRPRMKGRFV+R+
Sbjct: 316 -----------REARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 314

The following BLAST results are available for this feature:

BLAST of Lsi08G004090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWD0	5.7e-67	43.30	Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE...	[more]
Q8LG76	7.9e-61	43.21	Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2...	[more]
Q9C9A9	5.7e-43	37.76	Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2...	[more]
Q9M9B3	1.2e-29	35.21	Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1...	[more]
O50055	7.3e-14	27.87	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1...	[more]

BLAST of Lsi08G004090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K964	3.3e-126	72.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G039540 PE=3 SV=1	[more]
A0A5D3CIY1	4.4e-123	69.86	Zinc finger protein CONSTANS-LIKE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
E5GC84	4.4e-123	69.86	Zinc finger (B-box type) family protein OS=Cucumis melo subsp. melo OX=412675 PE...	[more]
A0A1S3BD97	4.4e-123	69.86	zinc finger protein CONSTANS-LIKE 6 OS=Cucumis melo OX=3656 GN=LOC103488625 PE=3...	[more]
A0A6J1FIQ3	1.4e-116	66.67	zinc finger protein CONSTANS-LIKE 16-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of Lsi08G004090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884057.1	5.7e-157	82.04	zinc finger protein CONSTANS-LIKE 16-like [Benincasa hispida]	[more]
XP_004140861.1	6.8e-126	72.18	zinc finger protein CONSTANS-LIKE 6 [Cucumis sativus] >KGN45963.1 hypothetical p...	[more]
XP_008445668.1	9.2e-123	69.86	PREDICTED: zinc finger protein CONSTANS-LIKE 6 [Cucumis melo] >ADN34083.1 zinc f...	[more]
XP_022938378.1	2.9e-116	66.67	zinc finger protein CONSTANS-LIKE 16-like [Cucurbita moschata]	[more]
XP_022971763.1	4.1e-115	64.30	zinc finger protein CONSTANS-LIKE 16-like [Cucurbita maxima]	[more]

BLAST of Lsi08G004090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G25440.1	4.0e-68	43.30	B-box type zinc finger protein with CCT domain	[more]
AT1G68520.1	5.6e-62	43.21	B-box type zinc finger protein with CCT domain	[more]
AT1G73870.1	4.1e-44	37.76	B-box type zinc finger protein with CCT domain	[more]
AT1G49130.1	8.8e-31	35.21	B-box type zinc finger protein with CCT domain	[more]
AT1G49130.2	8.8e-31	35.21	B-box type zinc finger protein with CCT domain	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 14..61 e-value: 9.7E-11 score: 51.7
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 16..58 e-value: 3.1E-7 score: 30.5
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 14..61 score: 11.063687
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 300..342 e-value: 7.9E-18 score: 64.3
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 300..342 score: 16.082605
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..81
None	No IPR available	PANTHER	PTHR31874:SF43	ZINC FINGER PROTEIN CONSTANS-LIKE 6	coord: 1..348
None	No IPR available	PANTHER	PTHR31874	CCT MOTIF FAMILY PROTEIN, EXPRESSED	coord: 1..348
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 18..61 e-value: 1.28648E-18 score: 76.5675

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G004090.1	Lsi08G004090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding