Lsi07G011630 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi07G011630
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr07: 17099883 .. 17100986 (-)
RNA-Seq ExpressionLsi07G011630
SyntenyLsi07G011630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAGTGAGCAGGGCACTCCACTCTAGTACTTTCCTACATAGAGCAATAGCTGTAAAGCAGAATTCGTTCGGATCCTCCCACATGTTCAATCTTTTTTTAGCGGTTTCCCCAGAGATCTTTCTCATTAATGCTCTTTCTAGCTAGTCTTCCTTTACCTATGGAGATTAAAGGAGATAGAAGAAGAATCACATGTATGCGTGCTAAGCGTGGGCAAGCGAGGACAAGCAGAAGCTATGGAATAGAGTCTTTCCTTGCTTTGGCATTCAGTAAGTAGGTCAAGCTCGAAGCGCTGAAGCCCTATGTGCTATAATGCTGAGCCAAGGACGCTCCGCCTTATCTATAGAAGCAGTCAACTGGGTTCTGAACGAATTAGCTCCTTGGTAATGGCCTCAATCTATAGATAGAAAGCCCTATGATGGGAAACTACCACGTTAGGTTTGGAGAGAGAAGGCTCGACTTGTCGATAGATTCGATTCATACGGCTGTAGTAGCGGTAGTTGAATATTCCGATACAGCATTACTTGAATTGGAAGTTGATGAATTTCCTTCTTCGAGGCCTGTGGAATATTCCGCTTTTAAGCCCGTAGTTGAATTAACAGAAGAGAGGGCAACTAGCCTAAACTAACTACTTTTCTATTGAATAAGAAGAGCTTATAAAAGGAGTTGGTCAACAAGACCGAGGAATTCGAACTAGTATCCACTCATTACACAGAAGAAAGAGTAACGCTTGAAGTTCAATCTCCCCACATTCTATCTCCATCTGGGCTATTGACGGCTACCAACCCCCGCTCTATCTCTTCTGAGTCATCAGGGGTGACCCGAACTTCGGTGTCCAGAGGATCCATCTCTTCGACGGGTATAAAGGCTGGTTGCAGTGCTCAAACTTCCACTGACTCGCTTGGAGAAAGACGAAAATCGAAATTCTGCGAGAAAACTGAATCTTGCCAAGGAGAAGGATGCCTTATAACCCTCTACCCAGCTATATCTGGAATAACTGAAAACACCCTATTCATGATAGGACTGGTATACCCTCTCCCCTTAGTCCTTTTATCCATTTTTGACACCCCAGAAACCCTTAGGAATAGCCCTGGGGATTGTTAG

mRNA sequence

ATGCGACGGTTTCCCCAGAGATCTTTCTCATTAATGCTCTTTCTAGCTAGTCTTCCTTTACCTATGGAGATTAAAGGAGATAGAAGAAGAATCACATGTATGCGTGCTAAGCGTGGGCAAGCGAGGACAAGCAGAAGCTATGGAATAGAGTCTTTCCTTGCTTTGGCATTCAGTCAAGCTCGAAGCGCTGAAGCCCTATGTGCTATAATGCTGAGCCAAGGACGCTCCGCCTTATCTATAGAAGCAGTCAACTGGATAGAAAGCCCTATGATGGGAAACTACCACGTTAGGTTTGGAGAGAGAAGGCTCGACTTGTCGATAGATTCGATTCATACGGCTGTAGTAGCGGTAGTTGAATATTCCGATACAGCATTACTTGAATTGGAAGTTGATGAATTTCCTTCTTCGAGGCCTGTGGAATATTCCGCTTTTAAGCCCGAGTTGGTCAACAAGACCGAGGAATTCGAACTAGTATCCACTCATTACACAGAAGAAAGAGTAACGCTTGAAGTTCAATCTCCCCACATTCTATCTCCATCTGGGCTATTGACGGCTACCAACCCCCGCTCTATCTCTTCTGAGTCATCAGGGGTGACCCGAACTTCGGTGTCCAGAGGATCCATCTCTTCGACGGGTATAAAGGCTGGTTGCAGTGCTCAAACTTCCACTGACTCGCTTGGAGAAAGACGAAAATCGAAATTCTGCGAGAAAACTGAATCTTGCCAAGGAGAAGGATGCCTTATAACCCTCTACCCAGCTATATCTGGAATAACTGAAAACACCCTATTCATGATAGGACTGGTATACCCTCTCCCCTTAGTCCTTTTATCCATTTTTGACACCCCAGAAACCCTTAGGAATAGCCCTGGGGATTGTTAG

Coding sequence (CDS)

ATGCGACGGTTTCCCCAGAGATCTTTCTCATTAATGCTCTTTCTAGCTAGTCTTCCTTTACCTATGGAGATTAAAGGAGATAGAAGAAGAATCACATGTATGCGTGCTAAGCGTGGGCAAGCGAGGACAAGCAGAAGCTATGGAATAGAGTCTTTCCTTGCTTTGGCATTCAGTCAAGCTCGAAGCGCTGAAGCCCTATGTGCTATAATGCTGAGCCAAGGACGCTCCGCCTTATCTATAGAAGCAGTCAACTGGATAGAAAGCCCTATGATGGGAAACTACCACGTTAGGTTTGGAGAGAGAAGGCTCGACTTGTCGATAGATTCGATTCATACGGCTGTAGTAGCGGTAGTTGAATATTCCGATACAGCATTACTTGAATTGGAAGTTGATGAATTTCCTTCTTCGAGGCCTGTGGAATATTCCGCTTTTAAGCCCGAGTTGGTCAACAAGACCGAGGAATTCGAACTAGTATCCACTCATTACACAGAAGAAAGAGTAACGCTTGAAGTTCAATCTCCCCACATTCTATCTCCATCTGGGCTATTGACGGCTACCAACCCCCGCTCTATCTCTTCTGAGTCATCAGGGGTGACCCGAACTTCGGTGTCCAGAGGATCCATCTCTTCGACGGGTATAAAGGCTGGTTGCAGTGCTCAAACTTCCACTGACTCGCTTGGAGAAAGACGAAAATCGAAATTCTGCGAGAAAACTGAATCTTGCCAAGGAGAAGGATGCCTTATAACCCTCTACCCAGCTATATCTGGAATAACTGAAAACACCCTATTCATGATAGGACTGGTATACCCTCTCCCCTTAGTCCTTTTATCCATTTTTGACACCCCAGAAACCCTTAGGAATAGCCCTGGGGATTGTTAG

Protein sequence

MRRFPQRSFSLMLFLASLPLPMEIKGDRRRITCMRAKRGQARTSRSYGIESFLALAFSQARSAEALCAIMLSQGRSALSIEAVNWIESPMMGNYHVRFGERRLDLSIDSIHTAVVAVVEYSDTALLELEVDEFPSSRPVEYSAFKPELVNKTEEFELVSTHYTEERVTLEVQSPHILSPSGLLTATNPRSISSESSGVTRTSVSRGSISSTGIKAGCSAQTSTDSLGERRKSKFCEKTESCQGEGCLITLYPAISGITENTLFMIGLVYPLPLVLLSIFDTPETLRNSPGDC
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..207

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G011630.1Lsi07G011630.1mRNA