Lsi07G008520 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G008520
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	RING-type E3 ubiquitin ligase
Location	chr07: 9585204 .. 9594894 (+)
RNA-Seq Expression	Lsi07G008520
Synteny	Lsi07G008520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAATAAGCTTGGAAGAAGGAGACAAATGGTTGATGAGAAGTACACAAGGCCTCAGGGTCTTTACAACCATAAAGAAGTGGATCATAAGAAACTTAGGAAACTCATACTTGAATCAAAGCTTGCGCCATGTTATCCTGGAGATGAAGAATCTGCCTCTGATCTTGAAGAATGCCCCATATGCTTTCTGGTTTGTCATCACCCTTGGGGTTTTAAAGGCTCTGTTCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTTCCCCCCCCCCCCCCCACATATCTTGGTGGCTTTGTCTCATTCATTTTTTTTCCCTGTCTGGCTCTGGTGGATTAAAATATTGATTGTCTACAAGGCTATAGAAAGTTAAACAACTTGCGTTCTCTCTCTTTTTTTTTTTTTTTCTTGGAATGGTTACAGGAATTTAAACATTTTTTTTATTTCACTATTTCTTATGTTGTGAATTCCTCTGTTAAATATATTTCATCTTCCATATTTTTTTTAAGGTAACAAATTGAAATGTTATAGTTCATCTGTATTTTTGGGTGTTGTAACCTTTTCTTTTCTTTTTCTTTCCTCCTCCCTTTCAGTATTATCCAAGTCTCAATCGATCAAGATGTTGCATGAAAAGCATTTGTACAGGTAGATTGGGATAAATTTCACAAATGATTTATGATATGAATTTCATTTAGTCTGATAAATTTCCCTTCTTTTTCCAGAATGTTTTCTACAAATGAAAGTTCCAAATTCTACCCGGCCTACACAGTATCCTTCACCATGCATGGCATACCTCCGTATATATAATATGCTTTTTCAGTTTACTTTAAAGCTTTACTTCACCACTGTCATGCTTGTATATCTTAACTTGAGGAGATGTCCTTTTTGCAAAACCTCAAATTATGCTGTGGAGTATAGAGGTGTGAAATCAAAAGAAGAGAAGAGCTTGGAGCAAATTGTAAGACTTGATAATGTCATATTTGGTATCGTTATCTATTGGAACTACGGGATATCTAAAGCTTCTATCCCAATTGAAACCTATGACTAAACAACATTTATTGGAATTTCCCAGGAAGAACAGCGTGTTATAGAAGCAAAGATTAGAATACGGCAGCAGGAACTTCAGGATGATGAGGAAAGAATGCAGAAAAGACATGAATTAAGTACCTCTAATGCTGATACTACTGTGGAGGATGGTGAAGACAGCCCTGCAGCTGGTAGAATTTTACATCATTCAGGTGTTTTGTATTTGTGATTTTTTTTTTTCTGACTGCTTTCAAATATTTATCATCATTTTATGCGCTTCATTTTGGCAGTTCCATCTTCTCAATCTCCTGCCGAAGATGAGGAAATAGTTAGCTTGCCAGATTCTTGTATGACCCAAATCAGACCGCCACCACCTCCTATGCCCATTAGAAGCAACAGGTTCTTTTCGTTCTATTCTGATTGTGTTTCTGTCAATTAATGGACAGGTTTACCATTAATGTGCTTTCATTTATACTTGTGCCTCTCCGCTAATAAGTTGAATGATCAGACTTGCGAGAGGACTCCTTTGTATATATCTTTCTAAAAAATCAAAGCCCCTTGTTCTTTGACATCAATTTTGCATACGCAATCACATTTCGGTTTGCTTTGCTTCAAAAACGTTTCTGCAAACAAATATTCACTATCTCTCTCTCTCATACACACACACACACACACATTTTTAACCGTCATTAAATAATTTCCATGGTTCAATTTAACTAATTTGAGCTCTTTAAAATGATTTTCTACCAAACATTACTCTCCCAGAAATTGTGACTTGTACTCGTTGCTTAATTTGCTTGCATACATTTTGGACGGAGAATAAGTTAGTAAGATTGATATAAAATTTCTCTCTTTCTCAAGGATTGTCTGGATATATACCCAGGCAACCAGGGAAGTTACAAAGAAAGCTCCAATGTACTGGATTTTTTTTAATTAAAAAAAAATCATAGATATTTAGAGTTAGCTGCCCAAAATGGTCATACTGGAAACAAACGATACCTAGCATGTCCTTATTATCACCAAATCTCACATAAAAGCTTATTTGCTTTCCGACCTCCTCAAATGTTGATAACAGAGAGGTTCCATAAAGCTTTGGCTTTGGCCTATATCTTGAAAGGTTGGCCAAGGACCAGGATTGGAGAGAAATAATCACTAACAGCCAATGTTGTAAGGATGAAGAATTCAGATGTGAGCTACTTTCATATGGAGGAAAGAGTTTTGTGATGTTAAGGAGATAGAAGAGATTATTTCCTTTTCTCTAGCTTAGTGCGAATAATGGGGGACTTTTGAGTGGGTAAAGGATGATACCAATTTCAATCACGTGCATTTGCAGATGACCTGAATGGTTAGTATCGATGGATGATGGGGGAGAAACTACAGAATCAAATGATATTCCTAGATTTTTCTGAAGGCTTTCAGCATGAAGACTAATATGGCTAAATCCATGCTAGTGTGAACTAATATTGATTATTGGGATGTATATGACCAAGTTACCAGACTCTTGCTCTTGGGGTTCCTGGCTAGTTACTTATTTGCTCTTGGGATTTTTTCTGGCGGAAAATGTCACCAACTCACCACTTAACAGATCTGGAGTCTAGTAAAATAAATGACTTTGCTAAACTTTCTTGGTCGTCAGAATTTACAATCTATCTCTAGCCAAAGTTGTGCAGTTGATTCCTGTTTGATCTATTTTGTTGACCTTCCTTATTTCCATTTCATTTTCAAATGCCAATGAAGATTGCCAAGAGGTCGTAGGCTGGAGAGAAGAATTGGAGATCTGTTATGGGTTTTGGCTTGGGGGAGAAGGTAGTTGCCATCTTGTTAATTGGAGTATCATTTCCTTGCATTCTAATAATGGTGTTGGTCTCAGCTAATTGGGTTGTGGAGAAAGTTGTTTGCAATGTTTAACCTTAATTGGGTTTTTTGCAATGATTTTAAGGAGAATGTGTCTCAGCTCGTAATAGGTCCTTTAAAAGCACATTTACTACGGTTATGGATTAATGCAGTTAAAGCTGTTTTGTCAGAAATTGGTTTGATCATTTTGAGATTGCTAGAGTCAAAACTTCCTCTTGCTGCTCATTTTCCAAGATTTTTTCTATTATTCAATTCAAGATATTTGTCTTAATTGGAATATTTTCACTCAAGCATTGTAATTTGTAATTATGTCGTCATGACATATAGTTCTCTATTGTAATTGCTATATTTTGTTTTGGGAGTGATGAGGGTGCTATGGGTGTGTCAACCTAGTTGAGATAACCGAGTGCGCCTGCTAATTCCTAGTTTTAGTATTAGTAATCGTATGTATTTAGTCTCTTTGTAATTTGAGCAATAATCTCTTTTCATTTCATCAATGAAAAGTGTTGTTTCCATTTCCAATAATGGTGTTGGTCTTGTAAATTTTGGAAGCACATTGTTACTCTCCAAATGGATTTGGTGATTTTCTGAAGGAGAGAAGAGATGCTTTGGTCAAATATATTTGTTAGGGCAGTCAATTTGGTGGGTCATGGATAAGAGTAAGCTCATTAGTGGAAGAAACCACTGGGGTTTCTTAGGAAAATTTCTTAGGTGAGGTTGCAAGTTGAGCGGGTTTCTTCTTTTGAGACTGGCTGCTGTAAAATGATCTCATTTTAGGACTTCTGGATTTGTAAGCAATCTCTACAGATGCTTTTCTGAACAAGTGGTGGCTTAACAGCTCCAGAATAGTGCAGAAAGTGTGGAACTACCCGATGGGAGAAATTAATGGATCAAGAGGCTTTTGTGTGGCTCTGGTTGTATGGATTTTCTTCAGACTTACCAACCGAACCAAACTATGGGATTCTAGAAGATGTGGTCTTGAGAATTCTAGCTAATATTCAGTGAAAGTCTATGTTCTACCAGTTGACTGCTATTGTCTTGCATAAGTCTTATGAACGATGTTTGAAAAATTAAATCTTCCAACAATGCTAAGCTCATTCATGTGGACAGTAGTATCAATCTAAAAACATGGAGGAAATACAATATTTTCCTATTTGTTTCTTAGTGGAAGCATTTTCTGCAAAAGGAAGCAGATGACAGGCCCACATGTACCCAGTGCCCTTGCAATAATAAAAGTTGGATGAATCTTTTGGCATTTTTTGGAATGAGCTAATGCTTCCCCAGACAAATTCAAGGTCTGCCTTGTGGTCACGGATTTGAAGGAAAAACCAAGGTCCTAGAGCCAATGCAGTGAAAACATCATTGTAATGGATTTGGAAAGCAAGAGAGTTTTGAAGATAGATTCAGAGATTGGGAAGAAGTGTGAGGGTTAGCTAGACTTTTGAGTTAAATTGGTTAACTTTTCCAGATGTTTTTGCAATTATATTTTTATCTGTTATTTTTGTAATCTTTCCCTTGGCCTTTTAGGGCTCTTTGACCTCCTGTATTTCTTATAATTTCCACCAAAAACTTTTGGATTCTCTCTCTGTTTGGGGAGGGGGGTTGGGTGGGTAGAAAAGAAATCCAAACCATCCTTAGGGTTGCTGGTTGTTGAAGTAGTTTCCTTACATTAAATGAAACATCCCTTAGGGCTGCGGAAGAGTCTCTTTCAAATGTAGAAAGCATGTCAGATCAACTCTGATACTTATTAAGTTTAATCATGTGATGTGAAGTACATTATCAGTTAAATCTTTTTTACTGAAAAAAGATATAAGCCTAGAGTCAATTAAAATTCGGTGAAATATATTAGGTTCTTCATTGTACTTAGCTTACCATACTATGTGACAGAGAAAACATTTGAATTTTCTTTGCCTCTTCATTTGGAAAGTTCAAGTCCCAAAGAAAATTCAAGGGTTTTCAGAAACCATTAGACTTGTATTCTCATAGTTAATACAAGCCCTTTGTCTTTTTTTTTCTTTTTTTTTTTTCACCAGAAAGAGTCGGTTCTAGAAGTTGTCTTTATTACTTTGTTATAGAAAAATTTCTATTAAGGCCTTTGGAAGACGTGTTTTTTGGGGACAATAAGAGGACATGAGATGGGAGTACATATGCGCAAATCAGACTTTTTAAACCTAAATTTTGTTTGTTTCTGATAAATTTGATCTATAGTCTTCTGATGATGGTAGGTTGTGATGTGTATAGTCAGAACTATATATATTGATAAAAGCAATAACTTTAATTGAGAAAGAAATGAAAGAATAACTTTACTTTAATACAAGGGCATACAAAAAATTAAGCCCACAAAATAGGGGACCTCTAAAGAACTATATTTATATGTTGTCTCTACTTTATGAGATGGTTGGTTTTTCTGGCTGGAATCTAATAATCTCCCATTTAGAAATTTCAGGGATGATGAATTTGACAAGGATCTTGAGGACATAATGGTCATGGAAGCAATCTGGCTCTCAATTCAGGTATATAGCTCACCAATATATTGAAGAACTATTCTAGTTTCTTTCTTTTTTTTTTTTTTTTTCTCTTATACCTTTGGTGGAATTCTCTTCCCCAGTGTTTTTTATGGCATTAGGATTATTAAAAAAGAAAGGTTTTATATGCTCCACTGATGGAAAATTGTAACCAGAGATATGATTCGTAACCATCTTTAGGTGTATCATGTATGTGTCCTAGGCATTTTTTGACTATACTAAAAAACTATTAAATTCTCTTTTTTGTAATTGTAATCTCTAGTTTGGTTTCTATGTACAAGAGTTTTTTCTACTGCATTTTGATTTTGATTTTTCTTCTTTGTATTCTTTCCATTGTCCTGAACGAAAGTTTGATTTCTTACTTAAATAGGATGATTTGTTATGAACGAGGGGGATATTAACTTCCACAATGATGTCCTAATGAACTTTGACATCTATTATATAATCTATGGAGCCTGAAAATTTTGATGACCTTCTCTAATGAAGTTTGTCGTTGGGATTAGTAGCTGAGGGAATCACGTTCCAATTACTGAGTAGGGTTTTTCTGTTATTGAAATGGTCCGCCATCATGGAAAAGTACATCATTAAGCTTCCCCAGCCTTTACGAAATTCAAAGAGGATTCCCCCTCCTCCTCCCCTTCCTTAGATAAATGTTTTCCCCCCCTTTTTCAAATCATTGTACTCTGCGGGCAAGCTTATATGCAACTTTCTCCAATTACGAAATCATTTGCTAAACCTTACAGCATCTGAATTTGGAGAACTTAGAGAATATATATATTTTTCATTTCTAATTAGAGACCTTCTTTTGAGTAAGATCTTGATAAAGATGCTATTATATCTTTAGTATCCCAAAAAAAAAAGGGCCAAAGGGCTAAGGGGTCATGAGTTCAATCCATGATGGCCACCTACCTAATATTTAATATTCTACGGGTTTCCTTGACACCCAAATTTTGTAGGATCAGGCGGGTTATCCCGTGAGATTAGTTGAGGTGTGTGTAAATTGGTCTGGACATTTACAGATATAAAAATATATATATATATATATGGAAAATTTTAAAAATAGAAAAATAAGAGAAACTATTTACACAAAATAACAAAATTTTTAGATAGTTGTGATAGACGCTGATAGAAGTCTATCAGAGTCTATCCGTAATAGAAATAATAGAAGTCTATCACTGATAGATGCTGATAGAAGTATATCAATATCTATCAGTGTTTTTTTTGTTATTTTCTGTAAATAGTTTGACATTTTTTCTATCTGTAAAAATTTTCCATATATATATAATATCCCAAACCTCCCACCATTCCTATAAGCGTGTTGAGGAAAACTCTTCTATTTCTGTCAAGCTGTATCTGCCAATAGATTGATCTTGTAGCACTATGCCAAAAAGGTTTCGATTTTTGTTTATGTTAATGGCACTTAACTTGACACAACTGTAAACATGAGAGACCTTGTGCAGACTGGGAGCTGCAGAGGAGGTTCCACCACGTTTTAATGGGGAAGAGAAAATCCTAGAACCGATGTGTAGCAATTCATTAAAACACTTAAAATGGTTTGGATTTCTGTGTTGGCTATTACCATTTGTGCTTGTTCTGCCAAAGTTAAAAACCGAATGGACCAACTTAACTTGAATGGGATATCTTTGTAAATCTTTGTGGAAAAAGATTCTTTCAGCGGCAATTCATTAAAACACTTAAAATGGTTTGGATTTCTGTGTTGGCTATTACCATTTGTGCTTGTTCTGCCAAAGCTAAAAACCGAATGGATCAACTTAACTTGAATGGGATATCTTTGTAAATCTTTGTGGAAAAAGATTCTTTCAGCGGCAAAACCACTTCGCAAGATAGATTTGGTTGAAAAAAAATAGCCACAGCCTTCTGACTCCAGTCACTCTGAATTTTTTTCTTTCTGAGAAAGAGAATCGTTCCAACATACTCATGAGTCGAGCTCTTCTTGAATGAACACTTGGGCATTAGCTTCGTCATCACAGCACGCTGCATACTCTGAAGTTCTTGCTATTTGTAATTGGAACAATCTTGGTACTTGTCTGCGAGATGGCAGCCAAAGGAGAATCAAATTAGCGAACCAAGTATCATGTCAAAATTTGGACCATCTTCTTCAGTGCCTCTTGCAGAGTGTTTAACTTTTTTTGTAGGAGGCATGCTGATTTCAACTTTCAACTCCAAATACACCTAAATTTACGAGGTGCCTTTCATTGGTTGACTTAACTATTGTGGTTGAATTAATAAATAGTCACTATCAAATGTTCGTACAGTTTGTTGATCGGAGGACTTCAAGTTTCATTTGTACAGAAGACAAATAATGAGAGTTTGTAGCTCAAAAAATACGTAAAAATATTATGAATCTGAGAAAGAAAAAACTACTGATTTTTTATGCTTGATGGTTTGCCTCCTAGCACTTTCACATTTGAATTGTCTGTAGTATGGTTTTGTTCATGTTTACTTCATTAAAATGTGTAAAAATTGAAATCTTCAGGAGAAAGAAAGGCATAAAGATCCCGTTTACGCCGAGGCTGCTTCTTCTGATCAATATGCAACAGAAGGTCGATATGTCTCTCAAGCCACCATTCCGTTGGCTGGAACATCATCATCCCCGTCTGGAGGTCTTGCTTGTGCCATAGCTGCTTTAGCAGAGCAGCAGCAGCTTCAGCTTGGCAGAGGACCATCATCCAATTGCACAAATGGAGATTCACCTGTCTTCAACATGCTTCCTGGAGCCACGGAATTCTACAACAGGATGAACACCAATGTAGAAAACTATCCACCCGCCCAAGTCTCGATCAGTGCAGAAAATTATGCACCTGCACAGGTTTCGACAATCAACACAGTACCAGACTGTAGGATGATCTTAACAAGAAATGATGGAGAGTGGAATCTAGACCACCATCAATCAGAAGAAGCTGAAGCTGGGACAAGCTACCCAACGTCAGACTCGACTGAAGATAACGGTACTGAATGTTCTTTACCCACAGCTAATGCGATGGATGGTGGAAACCAAGCAACAATACCCATCATTCCTCAAAATTTTGAAGAGCAGATGATGCTGGCCATGGCCGTTTCTCTAGCAGAGGCTCGTGAAGTGTCTACCGGACCGGGGCATTCCTGGCAGGAGTAATTGTGATCATATCTAAATTGGAAGATTCAATTGTAGTCAACATGAATATAGTTGGCAGAGCGTCGGTTGGTTGGCGTAGACGAGCTGCGAGCTAGGGAATGCAGACAAGGAATGGCATGATGTTTGTTTGTTCAAAGGTGAAGGTAGCAACTCCTCTTCCCCCGGCCCATCGGTTGAAAAAAGAAAAATGAAGGGGGGAAAAAATGGAATACAAATTCTTTTAGTGAATTAAAAATTTGGTGGTTCATTCAAGTTCATGGTTGGCAATATTTCTCTTTCTTTTTTCATTTTTCTTTTTTTATAAAAATGATTGAAATCTTGTTTCAGGTTGAAGTTTATAGTGTTTTCTAGTGCACCCTGTAATGTATGGTCTATATGTAAAGTATTTCTCCCCCCAATGTTTTCCTTGTTCAACTTTCTTCAAAATAATATACTCATACCCAAGCTTTTTTT

mRNA sequence

ATGGGTAATAAGCTTGGAAGAAGGAGACAAATGGTTGATGAGAAGTACACAAGGCCTCAGGGTCTTTACAACCATAAAGAAGTGGATCATAAGAAACTTAGGAAACTCATACTTGAATCAAAGCTTGCGCCATGTTATCCTGGAGATGAAGAATCTGCCTCTGATCTTGAAGAATGCCCCATATGCTTTCTGTTTACTTTAAAGCTTTACTTCACCACTGTCATGCTTGTATATCTTAACTTGAGGAGATGTCCTTTTTGCAAAACCTCAAATTATGCTGTGGAGTATAGAGGTGTGAAATCAAAAGAAGAGAAGAGCTTGGAGCAAATTGAAGAACAGCGTGTTATAGAAGCAAAGATTAGAATACGGCAGCAGGAACTTCAGGATGATGAGGAAAGAATGCAGAAAAGACATGAATTAAGTACCTCTAATGCTGATACTACTGTGGAGGATGGTGAAGACAGCCCTGCAGCTGGTAGAATTTTACATCATTCAGTTCCATCTTCTCAATCTCCTGCCGAAGATGAGGAAATAGTTAGCTTGCCAGATTCTTGTATGACCCAAATCAGACCGCCACCACCTCCTATGCCCATTAGAAGCAACAGGGATGATGAATTTGACAAGGATCTTGAGGACATAATGGTCATGGAAGCAATCTGGCTCTCAATTCAGGAGAAAGAAAGGCATAAAGATCCCGTTTACGCCGAGGCTGCTTCTTCTGATCAATATGCAACAGAAGGTCGATATGTCTCTCAAGCCACCATTCCGTTGGCTGGAACATCATCATCCCCGTCTGGAGGTCTTGCTTGTGCCATAGCTGCTTTAGCAGAGCAGCAGCAGCTTCAGCTTGGCAGAGGACCATCATCCAATTGCACAAATGGAGATTCACCTGTCTTCAACATGCTTCCTGGAGCCACGGAATTCTACAACAGGATGAACACCAATGTAGAAAACTATCCACCCGCCCAAGTCTCGATCAGTGCAGAAAATTATGCACCTGCACAGGTTTCGACAATCAACACAGTACCAGACTGTAGGATGATCTTAACAAGAAATGATGGAGAGTGGAATCTAGACCACCATCAATCAGAAGAAGCTGAAGCTGGGACAAGCTACCCAACGTCAGACTCGACTGAAGATAACGGTACTGAATGTTCTTTACCCACAGCTAATGCGATGGATGGTGGAAACCAAGCAACAATACCCATCATTCCTCAAAATTTTGAAGAGCAGATGATGCTGGCCATGGCCGTTTCTCTAGCAGAGGCTCGTGAAGTGTCTACCGGACCGGGGCATTCCTGGCAGGAGTAATTGTGATCATATCTAAATTGGAAGATTCAATTGTAGTCAACATGAATATAGTTGGCAGAGCGTCGGTTGGTTGGCGTAGACGAGCTGCGAGCTAGGGAATGCAGACAAGGAATGGCATGATGTTTGTTTGTTCAAAGGTGAAGGTAGCAACTCCTCTTCCCCCGGCCCATCGGTTGAAAAAAGAAAAATGAAGGGGGGAAAAAATGGAATACAAATTCTTTTAGTGAATTAAAAATTTGGTGGTTCATTCAAGTTCATGGTTGGCAATATTTCTCTTTCTTTTTTCATTTTTCTTTTTTTATAAAAATGATTGAAATCTTGTTTCAGGTTGAAGTTTATAGTGTTTTCTAGTGCACCCTGTAATGTATGGTCTATATGTAAAGTATTTCTCCCCCCAATGTTTTCCTTGTTCAACTTTCTTCAAAATAATATACTCATACCCAAGCTTTTTTT

Coding sequence (CDS)

ATGGGTAATAAGCTTGGAAGAAGGAGACAAATGGTTGATGAGAAGTACACAAGGCCTCAGGGTCTTTACAACCATAAAGAAGTGGATCATAAGAAACTTAGGAAACTCATACTTGAATCAAAGCTTGCGCCATGTTATCCTGGAGATGAAGAATCTGCCTCTGATCTTGAAGAATGCCCCATATGCTTTCTGTTTACTTTAAAGCTTTACTTCACCACTGTCATGCTTGTATATCTTAACTTGAGGAGATGTCCTTTTTGCAAAACCTCAAATTATGCTGTGGAGTATAGAGGTGTGAAATCAAAAGAAGAGAAGAGCTTGGAGCAAATTGAAGAACAGCGTGTTATAGAAGCAAAGATTAGAATACGGCAGCAGGAACTTCAGGATGATGAGGAAAGAATGCAGAAAAGACATGAATTAAGTACCTCTAATGCTGATACTACTGTGGAGGATGGTGAAGACAGCCCTGCAGCTGGTAGAATTTTACATCATTCAGTTCCATCTTCTCAATCTCCTGCCGAAGATGAGGAAATAGTTAGCTTGCCAGATTCTTGTATGACCCAAATCAGACCGCCACCACCTCCTATGCCCATTAGAAGCAACAGGGATGATGAATTTGACAAGGATCTTGAGGACATAATGGTCATGGAAGCAATCTGGCTCTCAATTCAGGAGAAAGAAAGGCATAAAGATCCCGTTTACGCCGAGGCTGCTTCTTCTGATCAATATGCAACAGAAGGTCGATATGTCTCTCAAGCCACCATTCCGTTGGCTGGAACATCATCATCCCCGTCTGGAGGTCTTGCTTGTGCCATAGCTGCTTTAGCAGAGCAGCAGCAGCTTCAGCTTGGCAGAGGACCATCATCCAATTGCACAAATGGAGATTCACCTGTCTTCAACATGCTTCCTGGAGCCACGGAATTCTACAACAGGATGAACACCAATGTAGAAAACTATCCACCCGCCCAAGTCTCGATCAGTGCAGAAAATTATGCACCTGCACAGGTTTCGACAATCAACACAGTACCAGACTGTAGGATGATCTTAACAAGAAATGATGGAGAGTGGAATCTAGACCACCATCAATCAGAAGAAGCTGAAGCTGGGACAAGCTACCCAACGTCAGACTCGACTGAAGATAACGGTACTGAATGTTCTTTACCCACAGCTAATGCGATGGATGGTGGAAACCAAGCAACAATACCCATCATTCCTCAAAATTTTGAAGAGCAGATGATGCTGGCCATGGCCGTTTCTCTAGCAGAGGCTCGTGAAGTGTCTACCGGACCGGGGCATTCCTGGCAGGAGTAA

Protein sequence

MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECPICFLFTLKLYFTTVMLVYLNLRRCPFCKTSNYAVEYRGVKSKEEKSLEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSVPSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLSIQEKERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQLGRGPSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTVPDCRMILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQATIPIIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE

Homology

[Close]

BLAST of Lsi07G008520 vs. ExPASy Swiss-Prot
Match: Q93YV5 (E3 ubiquitin-protein ligase DA2 OS=Arabidopsis thaliana OX=3702 GN=DA2 PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 5.1e-70
Identity = 192/448 (42.86%), Postives = 250/448 (55.80%), Query Frame = 0


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGR+RQ+V+E+YT+PQGLY +K+VD KKLRKLI+ESKLAPCYPGD+ES  DLEECP
Sbjct: 1   MGNKLGRKRQVVEERYTKPQGLYVNKDVDVKKLRKLIVESKLAPCYPGDDESCHDLEECP 60

Query: 61  ICFLF---------TLKLYFTTVMLVYLNLR-----RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+          +K   T   L   N       +CPFCKT NYAVEYRGVKSKEEK 
Sbjct: 61  ICFLYYPSLNRSRCCMKSICTECFLQMKNPNSARPTQCPFCKTPNYAVEYRGVKSKEEKG 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           +EQ+EEQRVIEAKIR+RQ+E+QDDEE+MQKR  L + ++ T+   GE    +      S 
Sbjct: 121 IEQVEEQRVIEAKIRMRQKEMQDDEEKMQKR--LESCSSSTSAMTGEMEYGS-----TSA 180

Query: 181 PSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLSIQEK 240
            S  S  +D EI   P    + +R    P   R NR+DE D DLE++MVMEAIWLS+QE 
Sbjct: 181 ISYNSLMDDGEIA--PSQNASVVRQHSRP---RGNREDEVDVDLEELMVMEAIWLSVQET 240

Query: 241 ERHKDPVYAEAASSDQYATEGR-YVSQ----ATIPLAGTSSSPSGGLACAIAALAEQQQL 300
              ++    E  SS QY T+   YVS       I    T SS SGGL+CAI+ALAE+Q  
Sbjct: 241 GTQRNSASGEITSSRQYVTDNHSYVSSPPRVTPIVEPATPSSSSGGLSCAISALAERQ-- 300

Query: 301 QLGRGPSSNCT-NGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTIN 360
            +G   S N   N +   ++MLPG  + Y  +   V+                       
Sbjct: 301 MVGESSSHNHNHNVNVSSYSMLPGNCDSYYDIEQEVDGI--------------------- 360

Query: 361 TVPDCRMILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQAT 420
                      ++   +  H++  E  +  SY +S  T +       P            
Sbjct: 361 -----------DNHHHHRHHYEMGETGSSNSYVSSYMTGEGFHNFPPP----------PP 392

Query: 421 IPIIPQNFEEQMMLAMAVSLAEAREVST 429
           + I+P++FEEQMM+AMAVS+AE    +T
Sbjct: 421 LVIVPESFEEQMMMAMAVSMAEVHATTT 392

[Close]

BLAST of Lsi07G008520 vs. ExPASy Swiss-Prot
Match: A4GWX9 (E3 ubiquitin-protein ligase GW2 OS=Oryza sativa subsp. indica OX=39946 GN=GW2 PE=1 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.9e-64
Identity = 183/454 (40.31%), Postives = 248/454 (54.63%), Query Frame = 0


Query: 1   MGNKL-GRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPG--DEESASDLE 60
           MGN++ GRR+  V+E+YTRPQGLY H+++D KKLRKLILE+KLAPCY G  D  +A+DLE
Sbjct: 1   MGNRIGGRRKAGVEERYTRPQGLYEHRDIDQKKLRKLILEAKLAPCYMGADDAAAAADLE 60

Query: 61  ECPICFLFTLKLYFTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSKE 120
           ECPICFL+   L  +           +L ++        +CPFCKT +YAVEYRGVK+KE
Sbjct: 61  ECPICFLYYPSLNRSKCCSKGICTECFLQMKPTHTAQPTQCPFCKTPSYAVEYRGVKTKE 120

Query: 121 EKSLEQIEEQRVIEAKIRIRQQELQDDEERM-QKRHELSTSNADTTVEDGEDSPAAGRIL 180
           E+S+EQ EEQ+VIEA++R+RQQ LQD+E++M +K++  S+S   T  ++ E         
Sbjct: 121 ERSIEQFEEQKVIEAQMRMRQQALQDEEDKMKRKQNRCSSSRTITPTKEVEYRDICS--T 180

Query: 181 HHSVPSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLS 240
             SVPS +   ++ E  S   SC  Q      P   R NRDD  D ++ED+MVMEAIW S
Sbjct: 181 SFSVPSYRCAEQETECCSSEPSCSAQ--TSMRPFHSRHNRDDNIDMNIEDMMVMEAIWRS 240

Query: 241 IQEKERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQ 300
           IQE+    +PV        + +   R   Q  +P A       GG +CA+AA+AE Q   
Sbjct: 241 IQEQGSIGNPVCGNFMPVTEPSPRER---QPFVPAASLEIPHGGGFSCAVAAMAEHQPPS 300

Query: 301 LGRGPSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTV 360
           +    S    +   PVF+M             N+E+ P +   I+               
Sbjct: 301 MDF--SYMAGSSAFPVFDMFRRPCNIAGGSMCNLESSPESWSGIA--------------- 360

Query: 361 PDCRMILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQATIP 420
           P C   + R +GE + D H SE AEAGTSY  SD   D GT   LP A      N A  P
Sbjct: 361 PSCSREVVREEGECSAD-HWSEGAEAGTSYAGSDIVADAGTMPQLPFAE-----NFAMAP 420

Query: 421 --IIPQNFEEQMMLAMAVSLAEAREVSTGPGHSW 435
               P++ EEQMM +MA+SLA+    +   G +W
Sbjct: 421 SHFRPESIEEQMMFSMALSLADGHGRTHSQGLAW 424

[Close]

BLAST of Lsi07G008520 vs. ExPASy Swiss-Prot
Match: B9F4Q9 (E3 ubiquitin-protein ligase GW2 OS=Oryza sativa subsp. japonica OX=39947 GN=GW2 PE=1 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.9e-64
Identity = 183/454 (40.31%), Postives = 248/454 (54.63%), Query Frame = 0


Query: 1   MGNKL-GRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPG--DEESASDLE 60
           MGN++ GRR+  V+E+YTRPQGLY H+++D KKLRKLILE+KLAPCY G  D  +A+DLE
Sbjct: 1   MGNRIGGRRKAGVEERYTRPQGLYEHRDIDQKKLRKLILEAKLAPCYMGADDAAAAADLE 60

Query: 61  ECPICFLFTLKLYFTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSKE 120
           ECPICFL+   L  +           +L ++        +CPFCKT +YAVEYRGVK+KE
Sbjct: 61  ECPICFLYYPSLNRSKCCSKGICTECFLQMKPTHTAQPTQCPFCKTPSYAVEYRGVKTKE 120

Query: 121 EKSLEQIEEQRVIEAKIRIRQQELQDDEERM-QKRHELSTSNADTTVEDGEDSPAAGRIL 180
           E+S+EQ EEQ+VIEA++R+RQQ LQD+E++M +K++  S+S   T  ++ E         
Sbjct: 121 ERSIEQFEEQKVIEAQMRMRQQALQDEEDKMKRKQNRCSSSRTITPTKEVEYRDICS--T 180

Query: 181 HHSVPSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLS 240
             SVPS +   ++ E  S   SC  Q      P   R NRDD  D ++ED+MVMEAIW S
Sbjct: 181 SFSVPSYRCAEQETECCSSEPSCSAQ--TSMRPFHSRHNRDDNIDMNIEDMMVMEAIWRS 240

Query: 241 IQEKERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQ 300
           IQE+    +PV        + +   R   Q  +P A       GG +CA+AA+AE Q   
Sbjct: 241 IQEQGSIGNPVCGNFMPVTEPSPRER---QPFVPAASLEIPHGGGFSCAVAAMAEHQPPS 300

Query: 301 LGRGPSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTV 360
           +    S    +   PVF+M             N+E+ P +   I+               
Sbjct: 301 MDF--SYMAGSSAFPVFDMFRRPCNIAGGSMCNLESSPESWSGIA--------------- 360

Query: 361 PDCRMILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQATIP 420
           P C   + R +GE + D H SE AEAGTSY  SD   D GT   LP A      N A  P
Sbjct: 361 PSCSREVVREEGECSAD-HWSEGAEAGTSYAGSDIVADAGTMPQLPFAE-----NFAMAP 420

Query: 421 --IIPQNFEEQMMLAMAVSLAEAREVSTGPGHSW 435
               P++ EEQMM +MA+SLA+    +   G +W
Sbjct: 421 SHFRPESIEEQMMFSMALSLADGHGRTHSQGLAW 424

[Close]

BLAST of Lsi07G008520 vs. ExPASy Swiss-Prot
Match: Q940G8 (E3 ubiquitin-protein ligase DA2L OS=Arabidopsis thaliana OX=3702 GN=DA2L PE=2 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.2e-64
Identity = 170/341 (49.85%), Postives = 211/341 (61.88%), Query Frame = 0


Query: 1   MGNKLGRRRQMVDEKYTRP-QGLYNHKEVDHKKLRKLILESKLAPCYPGDEESAS---DL 60
           MGNKLGR+RQ+VDE+YT+P QGLY  K+VD KKL+KLILESKLAPCYPG EE+ S   DL
Sbjct: 1   MGNKLGRKRQIVDERYTKPQQGLYMSKDVDIKKLKKLILESKLAPCYPGLEETPSSHHDL 60

Query: 61  EECPICFLFTLKLYFTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSK 120
           EECPICFL+   L  +   +       +L ++        +CPFCKTSNYAVEYRG K+K
Sbjct: 61  EECPICFLYYPSLNRSRCCMKSICTECFLRMKSPNSAQPTQCPFCKTSNYAVEYRGGKTK 120

Query: 121 EEKSLEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVE--DGEDSPAAGR 180
           EEKS EQIEEQRVIEAKIR+RQ+E++DDEERMQKR E  +S++ T+    D E   AA  
Sbjct: 121 EEKSFEQIEEQRVIEAKIRMRQKEVEDDEERMQKRLESYSSSSSTSAATLDTEYGSAA-- 180

Query: 181 ILHHSVPSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIW 240
                        +DEEIVS  +SC+    P       +  RD +FD DLEDIMVMEAIW
Sbjct: 181 ------------EDDEEIVSSQESCLPSHHP-------QVTRDGQFDFDLEDIMVMEAIW 240

Query: 241 LSIQEKERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQ 300
           LS+QE      P      S D  + + R       P   +SSSPSGGLACAIA LAE+QQ
Sbjct: 241 LSMQE------PGIQRNTSPDDISEKDRNEE----PSTPSSSSPSGGLACAIAVLAERQQ 300

Query: 301 LQLGRGPSSNCTNGDSPVFNMLP--GATEFYNRMNTNVENY 320
           +    G SS+  N +    N++P  G    YN +  +  +Y
Sbjct: 301 MV---GVSSSNQNVNLASQNLVPDNGNNSHYNAIEQDSNHY 307

[Close]

BLAST of Lsi07G008520 vs. ExPASy TrEMBL
Match: A0A5D3CXY2 (RING-type E3 ubiquitin ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001270 PE=4 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 7.6e-210
Identity = 387/426 (90.85%), Postives = 395/426 (92.72%), Query Frame = 0


Query: 11  MVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECPICFLFTLKLY 70
           MVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECPICFL      
Sbjct: 1   MVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECPICFLL----- 60

Query: 71  FTTVMLVYLNLRRCPFCKTSNYAVEYRGVKSKEEKSLEQIEEQRVIEAKIRIRQQELQDD 130
           FTT +LVYLNLRRCPFCKTSNYAVEYRGVKSKEEKSLEQIEEQRVIEAKIRIRQQELQDD
Sbjct: 61  FTTGILVYLNLRRCPFCKTSNYAVEYRGVKSKEEKSLEQIEEQRVIEAKIRIRQQELQDD 120

Query: 131 EERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSVPSSQSPAEDEEIVSLPDSCMTQIR 190
           EERMQKRHELSTSNADTTVE+GED+PAA        PSSQSPAEDEEIVSL D CMT IR
Sbjct: 121 EERMQKRHELSTSNADTTVENGEDNPAA-------APSSQSPAEDEEIVSLQDPCMTPIR 180

Query: 191 PPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLSIQEKERHKDPVYAEAASSDQYATEGRYV 250
           PPPPP+PIRSNRDDEFD DLEDIMVMEAIWLSIQEK RHKDPVYAEAASSDQYATEGRYV
Sbjct: 181 PPPPPIPIRSNRDDEFDLDLEDIMVMEAIWLSIQEKGRHKDPVYAEAASSDQYATEGRYV 240

Query: 251 SQATIPLAGTSSSPSGGLACAIAALAEQQQLQLGRGPSSNCTNGDSPVFNMLPGATEFYN 310
           S ATIPLAGTSSSPSGGLACAIAALAEQQ  Q+ RGPSS CTNGDSPVFNMLPGATEFYN
Sbjct: 241 SPATIPLAGTSSSPSGGLACAIAALAEQQ--QISRGPSSACTNGDSPVFNMLPGATEFYN 300

Query: 311 RMNTNVENYPPAQVSISAENYAPAQVSTINTVPDCRMILTRNDGEWNLDHHQSEEAEAGT 370
           RMNTNVENYPP QVSISAENYAPAQVS ++TVPDCRMILTRNDGEWNLD HQSEEAEAGT
Sbjct: 301 RMNTNVENYPPTQVSISAENYAPAQVSAVDTVPDCRMILTRNDGEWNLD-HQSEEAEAGT 360

Query: 371 SYPTSDSTEDNGTECSLPTANAMDGGNQATIPIIPQNFEEQMMLAMAVSLAEAREVSTGP 430
           SYPTSDS EDN TEC+LPT NAMDGGNQATIPIIPQNFEEQMMLAMAVSLAEAREVSTGP
Sbjct: 361 SYPTSDSNEDNSTECALPTVNAMDGGNQATIPIIPQNFEEQMMLAMAVSLAEAREVSTGP 411

Query: 431 GHSWQE 437
           GHSWQE
Sbjct: 421 GHSWQE 411

[Close]

BLAST of Lsi07G008520 vs. ExPASy TrEMBL
Match: A0A1S3BT41 (uncharacterized protein LOC103492971 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492971 PE=4 SV=1)

HSP 1 Score: 733.4 bits (1892), Expect = 5.5e-208
Identity = 388/450 (86.22%), Postives = 402/450 (89.33%), Query Frame = 0


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP
Sbjct: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60

Query: 61  ICFLFTLKLYFTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+   L  +   +       +L ++        +CPFCKTSNYAVEYRGVKSKEEKS
Sbjct: 61  ICFLYYPSLNRSRCCMKSICTECFLQMKVPNSTRPTQCPFCKTSNYAVEYRGVKSKEEKS 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVE+GED+PAA        
Sbjct: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVENGEDNPAA-------A 180

Query: 181 PSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLSIQEK 240
           PSSQSPAEDEEIVSL D CMT IRPPPPP+PIRSNRDDEFD DLEDIMVMEAIWLSIQEK
Sbjct: 181 PSSQSPAEDEEIVSLQDPCMTPIRPPPPPIPIRSNRDDEFDLDLEDIMVMEAIWLSIQEK 240

Query: 241 ERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQLGRG 300
            RHKDPVYAEAASSDQYATEGRYVS ATIPLAGTSSSPSGGLACAIAALAEQQ  Q+ RG
Sbjct: 241 GRHKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQ--QISRG 300

Query: 301 PSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTVPDCR 360
           PSS CTNGDSPVFNMLPGATEFYNRMNTNVENYPP QVSISAENYAPAQVS ++TVPDCR
Sbjct: 301 PSSACTNGDSPVFNMLPGATEFYNRMNTNVENYPPTQVSISAENYAPAQVSAVDTVPDCR 360

Query: 361 MILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQATIPIIPQ 420
           MILTRNDGEWNLD HQSEEAEAGTSYPTSDS EDN TEC+LPT NAMDGGNQATIPIIPQ
Sbjct: 361 MILTRNDGEWNLD-HQSEEAEAGTSYPTSDSNEDNSTECALPTVNAMDGGNQATIPIIPQ 420

Query: 421 NFEEQMMLAMAVSLAEAREVSTGPGHSWQE 437
           NFEEQMMLAMAVSLAEAREVSTGPGHSWQE
Sbjct: 421 NFEEQMMLAMAVSLAEAREVSTGPGHSWQE 440

[Close]

BLAST of Lsi07G008520 vs. ExPASy TrEMBL
Match: A0A1S3BS99 (uncharacterized protein LOC103492971 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492971 PE=4 SV=1)

HSP 1 Score: 728.0 bits (1878), Expect = 2.3e-206
Identity = 388/453 (85.65%), Postives = 402/453 (88.74%), Query Frame = 0


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP
Sbjct: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60

Query: 61  ICFLFTLKLYFTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+   L  +   +       +L ++        +CPFCKTSNYAVEYRGVKSKEEKS
Sbjct: 61  ICFLYYPSLNRSRCCMKSICTECFLQMKVPNSTRPTQCPFCKTSNYAVEYRGVKSKEEKS 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVE+GED+PAA        
Sbjct: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVENGEDNPAA-------A 180

Query: 181 PSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSN---RDDEFDKDLEDIMVMEAIWLSI 240
           PSSQSPAEDEEIVSL D CMT IRPPPPP+PIRSN   RDDEFD DLEDIMVMEAIWLSI
Sbjct: 181 PSSQSPAEDEEIVSLQDPCMTPIRPPPPPIPIRSNRNFRDDEFDLDLEDIMVMEAIWLSI 240

Query: 241 QEKERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQL 300
           QEK RHKDPVYAEAASSDQYATEGRYVS ATIPLAGTSSSPSGGLACAIAALAEQQ  Q+
Sbjct: 241 QEKGRHKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQ--QI 300

Query: 301 GRGPSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTVP 360
            RGPSS CTNGDSPVFNMLPGATEFYNRMNTNVENYPP QVSISAENYAPAQVS ++TVP
Sbjct: 301 SRGPSSACTNGDSPVFNMLPGATEFYNRMNTNVENYPPTQVSISAENYAPAQVSAVDTVP 360

Query: 361 DCRMILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQATIPI 420
           DCRMILTRNDGEWNLD HQSEEAEAGTSYPTSDS EDN TEC+LPT NAMDGGNQATIPI
Sbjct: 361 DCRMILTRNDGEWNLD-HQSEEAEAGTSYPTSDSNEDNSTECALPTVNAMDGGNQATIPI 420

Query: 421 IPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 437
           IPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE
Sbjct: 421 IPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 443

[Close]

BLAST of Lsi07G008520 vs. ExPASy TrEMBL
Match: A0A1S3BTF8 (uncharacterized protein LOC103492971 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492971 PE=4 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 4.5e-202
Identity = 382/453 (84.33%), Postives = 395/453 (87.20%), Query Frame = 0


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP
Sbjct: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60

Query: 61  ICFLFTLKLYFTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+   L  +   +       +L ++        +CPFCKTSNYAVEYRGVKSKEEKS
Sbjct: 61  ICFLYYPSLNRSRCCMKSICTECFLQMKVPNSTRPTQCPFCKTSNYAVEYRGVKSKEEKS 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVE              + 
Sbjct: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVE--------------NA 180

Query: 181 PSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSN---RDDEFDKDLEDIMVMEAIWLSI 240
           PSSQSPAEDEEIVSL D CMT IRPPPPP+PIRSN   RDDEFD DLEDIMVMEAIWLSI
Sbjct: 181 PSSQSPAEDEEIVSLQDPCMTPIRPPPPPIPIRSNRNFRDDEFDLDLEDIMVMEAIWLSI 240

Query: 241 QEKERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQL 300
           QEK RHKDPVYAEAASSDQYATEGRYVS ATIPLAGTSSSPSGGLACAIAALAEQQ  Q+
Sbjct: 241 QEKGRHKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQ--QI 300

Query: 301 GRGPSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTVP 360
            RGPSS CTNGDSPVFNMLPGATEFYNRMNTNVENYPP QVSISAENYAPAQVS ++TVP
Sbjct: 301 SRGPSSACTNGDSPVFNMLPGATEFYNRMNTNVENYPPTQVSISAENYAPAQVSAVDTVP 360

Query: 361 DCRMILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQATIPI 420
           DCRMILTRNDGEWNLD HQSEEAEAGTSYPTSDS EDN TEC+LPT NAMDGGNQATIPI
Sbjct: 361 DCRMILTRNDGEWNLD-HQSEEAEAGTSYPTSDSNEDNSTECALPTVNAMDGGNQATIPI 420

Query: 421 IPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 437
           IPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE
Sbjct: 421 IPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 436

[Close]

BLAST of Lsi07G008520 vs. ExPASy TrEMBL
Match: A0A5A7V431 (RING-type E3 ubiquitin ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001040 PE=4 SV=1)

HSP 1 Score: 709.1 bits (1829), Expect = 1.1e-200
Identity = 378/443 (85.33%), Postives = 392/443 (88.49%), Query Frame = 0


Query: 11  MVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECPICFLFTLKLY 70
           MVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECPICFL+   L 
Sbjct: 1   MVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECPICFLYYPSLN 60

Query: 71  FTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSKEEKSLEQIEEQRVI 130
            +   +       +L ++        +CPFCKTSNYAVEYRGVKSKEEKSLEQIEEQRVI
Sbjct: 61  RSRCCMKSICTECFLQMKVPNSTRPTQCPFCKTSNYAVEYRGVKSKEEKSLEQIEEQRVI 120

Query: 131 EAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSVPSSQSPAEDE 190
           EAKIRIRQQELQDDEERMQKRHELSTSNADTTVE+GED+PAA        PSSQSPAEDE
Sbjct: 121 EAKIRIRQQELQDDEERMQKRHELSTSNADTTVENGEDNPAA-------APSSQSPAEDE 180

Query: 191 EIVSLPDSCMTQIRPPPPPMPIRSN---RDDEFDKDLEDIMVMEAIWLSIQEKERHKDPV 250
           EIVSL D CMT IRPPPPP+PIRSN   RDDEFD DLEDIMVMEAIWLSIQEK RHKDPV
Sbjct: 181 EIVSLQDPCMTPIRPPPPPIPIRSNRNFRDDEFDLDLEDIMVMEAIWLSIQEKGRHKDPV 240

Query: 251 YAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQLGRGPSSNCTN 310
           YAEAASSDQYATEGRYVS ATIPLAGTSSSPSGGLACAIAALAEQQ  Q+ RGPSS CTN
Sbjct: 241 YAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQ--QISRGPSSACTN 300

Query: 311 GDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTVPDCRMILTRND 370
           GDSPVFNMLPGATEFYNRMNTNVENYPP QVSISAENYAPAQVS ++TVPDCRMILTRND
Sbjct: 301 GDSPVFNMLPGATEFYNRMNTNVENYPPTQVSISAENYAPAQVSAVDTVPDCRMILTRND 360

Query: 371 GEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQATIPIIPQNFEEQMM 430
           GEWNLD HQSEEAEAGTSYPTSDS EDN TEC+LPT NAMDGGNQATIPIIPQNFEEQMM
Sbjct: 361 GEWNLD-HQSEEAEAGTSYPTSDSNEDNSTECALPTVNAMDGGNQATIPIIPQNFEEQMM 420

Query: 431 LAMAVSLAEAREVSTGPGHSWQE 437
           LAMAVSLAEAREVSTGPGHSWQE
Sbjct: 421 LAMAVSLAEAREVSTGPGHSWQE 433

[Close]

BLAST of Lsi07G008520 vs. NCBI nr
Match: TYK16345.1 (RING-type E3 ubiquitin ligase [Cucumis melo var. makuwa])

HSP 1 Score: 739.6 bits (1908), Expect = 1.6e-209
Identity = 387/426 (90.85%), Postives = 395/426 (92.72%), Query Frame = 0


Query: 11  MVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECPICFLFTLKLY 70
           MVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECPICFL      
Sbjct: 1   MVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECPICFLL----- 60

Query: 71  FTTVMLVYLNLRRCPFCKTSNYAVEYRGVKSKEEKSLEQIEEQRVIEAKIRIRQQELQDD 130
           FTT +LVYLNLRRCPFCKTSNYAVEYRGVKSKEEKSLEQIEEQRVIEAKIRIRQQELQDD
Sbjct: 61  FTTGILVYLNLRRCPFCKTSNYAVEYRGVKSKEEKSLEQIEEQRVIEAKIRIRQQELQDD 120

Query: 131 EERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSVPSSQSPAEDEEIVSLPDSCMTQIR 190
           EERMQKRHELSTSNADTTVE+GED+PAA        PSSQSPAEDEEIVSL D CMT IR
Sbjct: 121 EERMQKRHELSTSNADTTVENGEDNPAA-------APSSQSPAEDEEIVSLQDPCMTPIR 180

Query: 191 PPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLSIQEKERHKDPVYAEAASSDQYATEGRYV 250
           PPPPP+PIRSNRDDEFD DLEDIMVMEAIWLSIQEK RHKDPVYAEAASSDQYATEGRYV
Sbjct: 181 PPPPPIPIRSNRDDEFDLDLEDIMVMEAIWLSIQEKGRHKDPVYAEAASSDQYATEGRYV 240

Query: 251 SQATIPLAGTSSSPSGGLACAIAALAEQQQLQLGRGPSSNCTNGDSPVFNMLPGATEFYN 310
           S ATIPLAGTSSSPSGGLACAIAALAEQQ  Q+ RGPSS CTNGDSPVFNMLPGATEFYN
Sbjct: 241 SPATIPLAGTSSSPSGGLACAIAALAEQQ--QISRGPSSACTNGDSPVFNMLPGATEFYN 300

Query: 311 RMNTNVENYPPAQVSISAENYAPAQVSTINTVPDCRMILTRNDGEWNLDHHQSEEAEAGT 370
           RMNTNVENYPP QVSISAENYAPAQVS ++TVPDCRMILTRNDGEWNLD HQSEEAEAGT
Sbjct: 301 RMNTNVENYPPTQVSISAENYAPAQVSAVDTVPDCRMILTRNDGEWNLD-HQSEEAEAGT 360

Query: 371 SYPTSDSTEDNGTECSLPTANAMDGGNQATIPIIPQNFEEQMMLAMAVSLAEAREVSTGP 430
           SYPTSDS EDN TEC+LPT NAMDGGNQATIPIIPQNFEEQMMLAMAVSLAEAREVSTGP
Sbjct: 361 SYPTSDSNEDNSTECALPTVNAMDGGNQATIPIIPQNFEEQMMLAMAVSLAEAREVSTGP 411

Query: 431 GHSWQE 437
           GHSWQE
Sbjct: 421 GHSWQE 411

[Close]

BLAST of Lsi07G008520 vs. NCBI nr
Match: XP_038903386.1 (E3 ubiquitin-protein ligase DA2L-like isoform X2 [Benincasa hispida])

HSP 1 Score: 734.6 bits (1895), Expect = 5.1e-208
Identity = 391/450 (86.89%), Postives = 404/450 (89.78%), Query Frame = 0


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP
Sbjct: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60

Query: 61  ICFLFTLKLYFTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+   L  +   +       +L ++        +CPFCKTSNYAVEYRGVKSKEEKS
Sbjct: 61  ICFLYYPSLNRSRCCMKSICTECFLQMKVPNSTRPTQCPFCKTSNYAVEYRGVKSKEEKS 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAA       V
Sbjct: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAA-------V 180

Query: 181 PSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLSIQEK 240
           PSSQSPAEDEEIV L DSCMTQ+RPPPPP+PIRSNRDDEFD DLEDIMVMEAIWLSIQEK
Sbjct: 181 PSSQSPAEDEEIVGLQDSCMTQVRPPPPPIPIRSNRDDEFDLDLEDIMVMEAIWLSIQEK 240

Query: 241 ERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQLGRG 300
            RHKDPVY EAASSDQYATEGRYVS ATIPLAGTSSSPSGGLACAIAALAEQQ  Q+GRG
Sbjct: 241 GRHKDPVYPEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQ--QIGRG 300

Query: 301 PSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTVPDCR 360
           PSS C NGDSPVFNMLPGATEFYNRMN NVENYPPAQVSISAENYAPAQVSTI+ VPDCR
Sbjct: 301 PSSTCINGDSPVFNMLPGATEFYNRMNNNVENYPPAQVSISAENYAPAQVSTIDAVPDCR 360

Query: 361 MILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQATIPIIPQ 420
           MILTRN GEWNLD HQSEEAEAGTSYPTSDSTEDNGTEC+LPTANAMDGGNQAT+PIIPQ
Sbjct: 361 MILTRN-GEWNLD-HQSEEAEAGTSYPTSDSTEDNGTECALPTANAMDGGNQATMPIIPQ 420

Query: 421 NFEEQMMLAMAVSLAEAREVSTGPGHSWQE 437
           NFEEQMMLAMAVSLAEAREVS GPGHSWQE
Sbjct: 421 NFEEQMMLAMAVSLAEAREVSIGPGHSWQE 439

[Close]

BLAST of Lsi07G008520 vs. NCBI nr
Match: XP_008451791.1 (PREDICTED: uncharacterized protein LOC103492971 isoform X2 [Cucumis melo])

HSP 1 Score: 733.4 bits (1892), Expect = 1.1e-207
Identity = 388/450 (86.22%), Postives = 402/450 (89.33%), Query Frame = 0


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP
Sbjct: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60

Query: 61  ICFLFTLKLYFTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+   L  +   +       +L ++        +CPFCKTSNYAVEYRGVKSKEEKS
Sbjct: 61  ICFLYYPSLNRSRCCMKSICTECFLQMKVPNSTRPTQCPFCKTSNYAVEYRGVKSKEEKS 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVE+GED+PAA        
Sbjct: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVENGEDNPAA-------A 180

Query: 181 PSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLSIQEK 240
           PSSQSPAEDEEIVSL D CMT IRPPPPP+PIRSNRDDEFD DLEDIMVMEAIWLSIQEK
Sbjct: 181 PSSQSPAEDEEIVSLQDPCMTPIRPPPPPIPIRSNRDDEFDLDLEDIMVMEAIWLSIQEK 240

Query: 241 ERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQLGRG 300
            RHKDPVYAEAASSDQYATEGRYVS ATIPLAGTSSSPSGGLACAIAALAEQQ  Q+ RG
Sbjct: 241 GRHKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQ--QISRG 300

Query: 301 PSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTVPDCR 360
           PSS CTNGDSPVFNMLPGATEFYNRMNTNVENYPP QVSISAENYAPAQVS ++TVPDCR
Sbjct: 301 PSSACTNGDSPVFNMLPGATEFYNRMNTNVENYPPTQVSISAENYAPAQVSAVDTVPDCR 360

Query: 361 MILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQATIPIIPQ 420
           MILTRNDGEWNLD HQSEEAEAGTSYPTSDS EDN TEC+LPT NAMDGGNQATIPIIPQ
Sbjct: 361 MILTRNDGEWNLD-HQSEEAEAGTSYPTSDSNEDNSTECALPTVNAMDGGNQATIPIIPQ 420

Query: 421 NFEEQMMLAMAVSLAEAREVSTGPGHSWQE 437
           NFEEQMMLAMAVSLAEAREVSTGPGHSWQE
Sbjct: 421 NFEEQMMLAMAVSLAEAREVSTGPGHSWQE 440

[Close]

BLAST of Lsi07G008520 vs. NCBI nr
Match: XP_004137251.1 (E3 ubiquitin-protein ligase DA2L isoform X2 [Cucumis sativus] >KGN53554.2 hypothetical protein Csa_014426 [Cucumis sativus])

HSP 1 Score: 730.7 bits (1885), Expect = 7.3e-207
Identity = 387/450 (86.00%), Postives = 403/450 (89.56%), Query Frame = 0


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGRRRQ+VDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP
Sbjct: 1   MGNKLGRRRQIVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60

Query: 61  ICFLFTLKLYFTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+   L  +   +       +L ++        +CP+CKTSNYAVEYRGVKSKEEKS
Sbjct: 61  ICFLYYPSLNRSRCCMKSICTECFLQMKVPNSTRPTQCPYCKTSNYAVEYRGVKSKEEKS 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVE+GEDSPAA       V
Sbjct: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVENGEDSPAA-------V 180

Query: 181 PSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLSIQEK 240
           PSSQSPAEDEEIVSL D CMTQIRPPPPP+PIRSNRDDEFD DLEDIMVMEAIWLSIQEK
Sbjct: 181 PSSQSPAEDEEIVSLQDPCMTQIRPPPPPIPIRSNRDDEFDLDLEDIMVMEAIWLSIQEK 240

Query: 241 ERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQLGRG 300
            R+KDPVYAEAASSDQYATEGRYVS ATIPLAGTSSSPSGGLACAIAALAEQQ  Q+GRG
Sbjct: 241 GRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQ--QIGRG 300

Query: 301 PSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTVPDCR 360
           PSS CTNGDSPVF MLPGATEFYNRMNTNVENYPP Q SISAENYAPAQVST++TVPDCR
Sbjct: 301 PSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDTVPDCR 360

Query: 361 MILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQATIPIIPQ 420
           MILTRNDGEWNLD HQSEEAEAGTSYPTSD  EDN TEC+LPT NAMDGGNQATIPIIPQ
Sbjct: 361 MILTRNDGEWNLD-HQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIPIIPQ 420

Query: 421 NFEEQMMLAMAVSLAEAREVSTGPGHSWQE 437
           NFEEQMMLAMAVSLAEAREVSTGPGHSWQE
Sbjct: 421 NFEEQMMLAMAVSLAEAREVSTGPGHSWQE 440

[Close]

BLAST of Lsi07G008520 vs. NCBI nr
Match: XP_038903369.1 (E3 ubiquitin-protein ligase DA2L-like isoform X1 [Benincasa hispida] >XP_038903377.1 E3 ubiquitin-protein ligase DA2L-like isoform X1 [Benincasa hispida])

HSP 1 Score: 729.2 bits (1881), Expect = 2.1e-206
Identity = 391/453 (86.31%), Postives = 404/453 (89.18%), Query Frame = 0


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP
Sbjct: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60

Query: 61  ICFLFTLKLYFTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+   L  +   +       +L ++        +CPFCKTSNYAVEYRGVKSKEEKS
Sbjct: 61  ICFLYYPSLNRSRCCMKSICTECFLQMKVPNSTRPTQCPFCKTSNYAVEYRGVKSKEEKS 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAA       V
Sbjct: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAA-------V 180

Query: 181 PSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSN---RDDEFDKDLEDIMVMEAIWLSI 240
           PSSQSPAEDEEIV L DSCMTQ+RPPPPP+PIRSN   RDDEFD DLEDIMVMEAIWLSI
Sbjct: 181 PSSQSPAEDEEIVGLQDSCMTQVRPPPPPIPIRSNRNFRDDEFDLDLEDIMVMEAIWLSI 240

Query: 241 QEKERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQL 300
           QEK RHKDPVY EAASSDQYATEGRYVS ATIPLAGTSSSPSGGLACAIAALAEQQ  Q+
Sbjct: 241 QEKGRHKDPVYPEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQ--QI 300

Query: 301 GRGPSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTVP 360
           GRGPSS C NGDSPVFNMLPGATEFYNRMN NVENYPPAQVSISAENYAPAQVSTI+ VP
Sbjct: 301 GRGPSSTCINGDSPVFNMLPGATEFYNRMNNNVENYPPAQVSISAENYAPAQVSTIDAVP 360

Query: 361 DCRMILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQATIPI 420
           DCRMILTRN GEWNLD HQSEEAEAGTSYPTSDSTEDNGTEC+LPTANAMDGGNQAT+PI
Sbjct: 361 DCRMILTRN-GEWNLD-HQSEEAEAGTSYPTSDSTEDNGTECALPTANAMDGGNQATMPI 420

Query: 421 IPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 437
           IPQNFEEQMMLAMAVSLAEAREVS GPGHSWQE
Sbjct: 421 IPQNFEEQMMLAMAVSLAEAREVSIGPGHSWQE 442

[Close]

BLAST of Lsi07G008520 vs. TAIR 10
Match: AT1G78420.1 (RING/U-box superfamily protein )

HSP 1 Score: 266.5 bits (680), Expect = 3.7e-71
Identity = 192/448 (42.86%), Postives = 250/448 (55.80%), Query Frame = 0


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGR+RQ+V+E+YT+PQGLY +K+VD KKLRKLI+ESKLAPCYPGD+ES  DLEECP
Sbjct: 1   MGNKLGRKRQVVEERYTKPQGLYVNKDVDVKKLRKLIVESKLAPCYPGDDESCHDLEECP 60

Query: 61  ICFLF---------TLKLYFTTVMLVYLNLR-----RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+          +K   T   L   N       +CPFCKT NYAVEYRGVKSKEEK 
Sbjct: 61  ICFLYYPSLNRSRCCMKSICTECFLQMKNPNSARPTQCPFCKTPNYAVEYRGVKSKEEKG 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           +EQ+EEQRVIEAKIR+RQ+E+QDDEE+MQKR  L + ++ T+   GE    +      S 
Sbjct: 121 IEQVEEQRVIEAKIRMRQKEMQDDEEKMQKR--LESCSSSTSAMTGEMEYGS-----TSA 180

Query: 181 PSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLSIQEK 240
            S  S  +D EI   P    + +R    P   R NR+DE D DLE++MVMEAIWLS+QE 
Sbjct: 181 ISYNSLMDDGEIA--PSQNASVVRQHSRP---RGNREDEVDVDLEELMVMEAIWLSVQET 240

Query: 241 ERHKDPVYAEAASSDQYATEGR-YVSQ----ATIPLAGTSSSPSGGLACAIAALAEQQQL 300
              ++    E  SS QY T+   YVS       I    T SS SGGL+CAI+ALAE+Q  
Sbjct: 241 GTQRNSASGEITSSRQYVTDNHSYVSSPPRVTPIVEPATPSSSSGGLSCAISALAERQ-- 300

Query: 301 QLGRGPSSNCT-NGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTIN 360
            +G   S N   N +   ++MLPG  + Y  +   V+                       
Sbjct: 301 MVGESSSHNHNHNVNVSSYSMLPGNCDSYYDIEQEVDGI--------------------- 360

Query: 361 TVPDCRMILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQAT 420
                      ++   +  H++  E  +  SY +S  T +       P            
Sbjct: 361 -----------DNHHHHRHHYEMGETGSSNSYVSSYMTGEGFHNFPPP----------PP 392

Query: 421 IPIIPQNFEEQMMLAMAVSLAEAREVST 429
           + I+P++FEEQMM+AMAVS+AE    +T
Sbjct: 421 LVIVPESFEEQMMMAMAVSMAEVHATTT 392

[Close]

BLAST of Lsi07G008520 vs. TAIR 10
Match: AT1G78420.2 (RING/U-box superfamily protein )

HSP 1 Score: 266.5 bits (680), Expect = 3.7e-71
Identity = 192/448 (42.86%), Postives = 250/448 (55.80%), Query Frame = 0


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGR+RQ+V+E+YT+PQGLY +K+VD KKLRKLI+ESKLAPCYPGD+ES  DLEECP
Sbjct: 1   MGNKLGRKRQVVEERYTKPQGLYVNKDVDVKKLRKLIVESKLAPCYPGDDESCHDLEECP 60

Query: 61  ICFLF---------TLKLYFTTVMLVYLNLR-----RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+          +K   T   L   N       +CPFCKT NYAVEYRGVKSKEEK 
Sbjct: 61  ICFLYYPSLNRSRCCMKSICTECFLQMKNPNSARPTQCPFCKTPNYAVEYRGVKSKEEKG 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           +EQ+EEQRVIEAKIR+RQ+E+QDDEE+MQKR  L + ++ T+   GE    +      S 
Sbjct: 121 IEQVEEQRVIEAKIRMRQKEMQDDEEKMQKR--LESCSSSTSAMTGEMEYGS-----TSA 180

Query: 181 PSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLSIQEK 240
            S  S  +D EI   P    + +R    P   R NR+DE D DLE++MVMEAIWLS+QE 
Sbjct: 181 ISYNSLMDDGEIA--PSQNASVVRQHSRP---RGNREDEVDVDLEELMVMEAIWLSVQET 240

Query: 241 ERHKDPVYAEAASSDQYATEGR-YVSQ----ATIPLAGTSSSPSGGLACAIAALAEQQQL 300
              ++    E  SS QY T+   YVS       I    T SS SGGL+CAI+ALAE+Q  
Sbjct: 241 GTQRNSASGEITSSRQYVTDNHSYVSSPPRVTPIVEPATPSSSSGGLSCAISALAERQ-- 300

Query: 301 QLGRGPSSNCT-NGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTIN 360
            +G   S N   N +   ++MLPG  + Y  +   V+                       
Sbjct: 301 MVGESSSHNHNHNVNVSSYSMLPGNCDSYYDIEQEVDGI--------------------- 360

Query: 361 TVPDCRMILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQAT 420
                      ++   +  H++  E  +  SY +S  T +       P            
Sbjct: 361 -----------DNHHHHRHHYEMGETGSSNSYVSSYMTGEGFHNFPPP----------PP 392

Query: 421 IPIIPQNFEEQMMLAMAVSLAEAREVST 429
           + I+P++FEEQMM+AMAVS+AE    +T
Sbjct: 421 LVIVPESFEEQMMMAMAVSMAEVHATTT 392

[Close]

BLAST of Lsi07G008520 vs. TAIR 10
Match: AT1G17145.1 (RING/U-box superfamily protein )

HSP 1 Score: 246.9 bits (629), Expect = 3.0e-65
Identity = 170/341 (49.85%), Postives = 211/341 (61.88%), Query Frame = 0


Query: 1   MGNKLGRRRQMVDEKYTRP-QGLYNHKEVDHKKLRKLILESKLAPCYPGDEESAS---DL 60
           MGNKLGR+RQ+VDE+YT+P QGLY  K+VD KKL+KLILESKLAPCYPG EE+ S   DL
Sbjct: 1   MGNKLGRKRQIVDERYTKPQQGLYMSKDVDIKKLKKLILESKLAPCYPGLEETPSSHHDL 60

Query: 61  EECPICFLFTLKLYFTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSK 120
           EECPICFL+   L  +   +       +L ++        +CPFCKTSNYAVEYRG K+K
Sbjct: 61  EECPICFLYYPSLNRSRCCMKSICTECFLRMKSPNSAQPTQCPFCKTSNYAVEYRGGKTK 120

Query: 121 EEKSLEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVE--DGEDSPAAGR 180
           EEKS EQIEEQRVIEAKIR+RQ+E++DDEERMQKR E  +S++ T+    D E   AA  
Sbjct: 121 EEKSFEQIEEQRVIEAKIRMRQKEVEDDEERMQKRLESYSSSSSTSAATLDTEYGSAA-- 180

Query: 181 ILHHSVPSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIW 240
                        +DEEIVS  +SC+    P       +  RD +FD DLEDIMVMEAIW
Sbjct: 181 ------------EDDEEIVSSQESCLPSHHP-------QVTRDGQFDFDLEDIMVMEAIW 240

Query: 241 LSIQEKERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQ 300
           LS+QE      P      S D  + + R       P   +SSSPSGGLACAIA LAE+QQ
Sbjct: 241 LSMQE------PGIQRNTSPDDISEKDRNEE----PSTPSSSSPSGGLACAIAVLAERQQ 300

Query: 301 LQLGRGPSSNCTNGDSPVFNMLP--GATEFYNRMNTNVENY 320
           +    G SS+  N +    N++P  G    YN +  +  +Y
Sbjct: 301 MV---GVSSSNQNVNLASQNLVPDNGNNSHYNAIEQDSNHY 307

The following BLAST results are available for this feature:

BLAST of Lsi07G008520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93YV5	5.1e-70	42.86	E3 ubiquitin-protein ligase DA2 OS=Arabidopsis thaliana OX=3702 GN=DA2 PE=1 SV=1	[more]
A4GWX9	1.9e-64	40.31	E3 ubiquitin-protein ligase GW2 OS=Oryza sativa subsp. indica OX=39946 GN=GW2 PE...	[more]
B9F4Q9	1.9e-64	40.31	E3 ubiquitin-protein ligase GW2 OS=Oryza sativa subsp. japonica OX=39947 GN=GW2 ...	[more]
Q940G8	4.2e-64	49.85	E3 ubiquitin-protein ligase DA2L OS=Arabidopsis thaliana OX=3702 GN=DA2L PE=2 SV...	[more]

BLAST of Lsi07G008520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CXY2	7.6e-210	90.85	RING-type E3 ubiquitin ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BT41	5.5e-208	86.22	uncharacterized protein LOC103492971 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BS99	2.3e-206	85.65	uncharacterized protein LOC103492971 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BTF8	4.5e-202	84.33	uncharacterized protein LOC103492971 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7V431	1.1e-200	85.33	RING-type E3 ubiquitin ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]

BLAST of Lsi07G008520 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK16345.1	1.6e-209	90.85	RING-type E3 ubiquitin ligase [Cucumis melo var. makuwa]	[more]
XP_038903386.1	5.1e-208	86.89	E3 ubiquitin-protein ligase DA2L-like isoform X2 [Benincasa hispida]	[more]
XP_008451791.1	1.1e-207	86.22	PREDICTED: uncharacterized protein LOC103492971 isoform X2 [Cucumis melo]	[more]
XP_004137251.1	7.3e-207	86.00	E3 ubiquitin-protein ligase DA2L isoform X2 [Cucumis sativus] >KGN53554.2 hypoth...	[more]
XP_038903369.1	2.1e-206	86.31	E3 ubiquitin-protein ligase DA2L-like isoform X1 [Benincasa hispida] >XP_0389033...	[more]

BLAST of Lsi07G008520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78420.1	3.7e-71	42.86	RING/U-box superfamily protein	[more]
AT1G78420.2	3.7e-71	42.86	RING/U-box superfamily protein	[more]
AT1G17145.1	3.0e-65	49.85	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 362..397
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 367..397
None	No IPR available	PANTHER	PTHR31315:SF12	E3 UBIQUITIN-PROTEIN LIGASE DA2	coord: 1..317
None	No IPR available	PANTHER	PTHR31315:SF12	E3 UBIQUITIN-PROTEIN LIGASE DA2	coord: 358..428
IPR039301	Protein Sip5/DA2	PANTHER	PTHR31315	PROTEIN SIP5	coord: 358..428 coord: 1..317

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G008520.1	Lsi07G008520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0046620	regulation of organ growth
biological_process	GO:0080113	regulation of seed growth
molecular_function	GO:0061630	ubiquitin protein ligase activity